AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0793230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0793230 MtrunA17_Chr1g0192151 100.000 423 0 0 1 423 1 423 0.0 863
Msa0793230 MtrunA17_Chr4g0014731 98.815 422 5 0 2 423 3 424 0.0 852
Msa0793230 MtrunA17_Chr1g0182711 44.670 394 186 3 34 416 65 437 3.52e-113 339
Msa0793230 MtrunA17_Chr7g0262801 45.669 381 185 2 37 416 77 436 4.12e-112 336
Msa0793230 MtrunA17_Chr4g0050561 52.740 292 137 1 124 414 113 404 3.61e-106 320
Msa0793230 MtrunA17_Chr8g0345461 52.542 295 137 1 120 411 115 409 1.69e-105 318
Msa0793230 MtrunA17_Chr1g0200081 52.203 295 137 2 120 411 125 418 1.95e-102 311
Msa0793230 MtrunA17_Chr3g0145011 46.201 329 171 2 97 423 73 397 1.88e-98 300
Msa0793230 MtrunA17_Chr3g0141901 45.872 327 172 2 97 422 70 392 2.34e-97 296
Msa0793230 MtrunA17_Chr3g0108321 43.421 304 151 2 48 351 61 343 2.33e-88 273
Msa0793230 MtrunA17_Chr3g0143721 41.538 260 150 2 154 413 237 494 7.61e-61 209
Msa0793230 MtrunA17_Chr4g0052411 41.036 251 147 1 169 419 231 480 2.77e-60 207
Msa0793230 MtrunA17_Chr2g0297281 40.152 264 147 2 169 422 288 550 1.94e-59 206
Msa0793230 MtrunA17_Chr7g0217421 39.051 274 158 3 150 418 20 289 3.14e-59 198
Msa0793230 MtrunA17_Chr1g0180791 41.702 235 137 0 161 395 472 706 9.39e-59 205
Msa0793230 MtrunA17_Chr1g0180791 41.702 235 134 2 169 403 207 438 1.62e-57 202
Msa0793230 MtrunA17_Chr7g0264521 41.702 235 137 0 161 395 473 707 1.28e-58 205
Msa0793230 MtrunA17_Chr7g0264521 41.277 235 135 2 169 403 208 439 5.94e-57 200
Msa0793230 MtrunA17_Chr2g0327121 41.702 235 137 0 161 395 474 708 2.64e-58 204
Msa0793230 MtrunA17_Chr2g0327121 36.304 303 177 5 101 403 154 440 5.98e-56 197
Msa0793230 MtrunA17_Chr7g0255721 41.667 252 144 2 163 412 681 931 5.90e-55 196
Msa0793230 MtrunA17_Chr7g0255721 35.065 231 144 3 167 396 386 611 9.70e-35 137
Msa0793230 MtrunA17_Chr2g0331161 43.220 236 133 1 169 404 417 651 9.69e-55 194
Msa0793230 MtrunA17_Chr5g0429571 39.552 268 153 4 149 408 290 556 1.28e-53 191
Msa0793230 MtrunA17_Chr6g0456351 42.857 245 134 3 166 408 316 556 1.86e-53 187
Msa0793230 MtrunA17_Chr4g0031821 41.152 243 139 3 169 408 322 563 3.37e-53 190
Msa0793230 MtrunA17_Chr7g0255691 41.803 244 140 1 163 404 282 525 7.39e-53 185
Msa0793230 MtrunA17_Chr7g0255691 33.600 250 158 4 172 417 22 267 1.48e-33 132
Msa0793230 MtrunA17_Chr3g0094871 38.776 245 147 2 169 411 13 256 1.25e-52 182
Msa0793230 MtrunA17_Chr8g0362771 43.460 237 131 2 169 405 239 472 4.12e-52 186
Msa0793230 MtrunA17_Chr7g0255651 39.394 231 140 0 163 393 278 508 6.22e-52 183
Msa0793230 MtrunA17_Chr7g0255651 29.032 248 164 5 174 417 24 263 5.35e-22 98.6
Msa0793230 MtrunA17_Chr7g0248361 40.741 243 140 4 169 408 194 435 8.97e-52 184
Msa0793230 MtrunA17_Chr3g0129971 40.613 261 148 4 154 408 283 542 2.15e-51 185
Msa0793230 MtrunA17_Chr8g0388371 38.281 256 149 3 161 408 398 652 3.45e-51 185
Msa0793230 MtrunA17_Chr7g0260601 38.889 252 146 4 162 408 235 483 4.02e-51 182
Msa0793230 MtrunA17_Chr7g0255901 38.247 251 150 5 158 405 630 878 5.70e-50 181
Msa0793230 MtrunA17_Chr3g0135721 42.797 236 131 2 169 404 226 457 1.45e-49 178
Msa0793230 MtrunA17_Chr3g0104211 41.152 243 137 4 166 404 303 543 1.94e-49 179
Msa0793230 MtrunA17_Chr1g0158881 43.578 218 118 2 163 380 325 537 2.93e-49 178
Msa0793230 MtrunA17_Chr6g0476861 38.525 244 144 4 169 408 199 440 3.33e-48 174
Msa0793230 MtrunA17_Chr7g0255641 37.597 258 158 2 163 418 654 910 3.87e-48 176
Msa0793230 MtrunA17_Chr7g0255641 36.486 222 115 7 206 411 432 643 2.00e-31 127
Msa0793230 MtrunA17_Chr3g0135761 42.553 235 131 2 170 404 225 455 4.33e-48 174
Msa0793230 MtrunA17_Chr7g0246111 36.704 267 151 6 130 393 184 435 5.55e-47 168
Msa0793230 MtrunA17_Chr4g0033451 38.583 254 145 5 156 403 371 619 1.62e-45 169
Msa0793230 MtrunA17_Chr4g0004121 39.344 244 131 6 161 394 236 472 3.68e-43 158
Msa0793230 MtrunA17_Chr2g0316851 37.872 235 137 4 167 395 594 825 3.98e-43 162
Msa0793230 MtrunA17_Chr4g0026631 39.130 230 128 8 161 386 121 342 5.18e-43 156
Msa0793230 MtrunA17_Chr5g0432631 38.039 255 151 3 169 420 231 481 1.75e-42 159
Msa0793230 MtrunA17_Chr4g0052271 37.037 243 140 7 165 402 117 351 1.37e-41 151
Msa0793230 MtrunA17_Chr2g0277831 38.494 239 137 4 169 402 245 478 3.78e-41 155
Msa0793230 MtrunA17_Chr2g0277831 34.348 230 146 2 165 392 531 757 3.39e-40 152
Msa0793230 MtrunA17_Chr2g0327231 42.331 163 94 0 165 327 344 506 5.41e-41 152
Msa0793230 MtrunA17_Chr2g0327231 32.051 156 89 3 101 256 100 238 6.54e-20 92.0
Msa0793230 MtrunA17_Chr2g0321241 37.555 229 133 7 161 386 126 347 8.16e-41 150
Msa0793230 MtrunA17_Chr5g0432641 36.466 266 156 5 144 404 167 424 1.03e-40 153
Msa0793230 MtrunA17_Chr4g0038101 39.286 224 127 5 169 388 723 941 1.17e-40 154
Msa0793230 MtrunA17_Chr1g0195731 37.991 229 133 5 169 393 936 1159 3.02e-40 153
Msa0793230 MtrunA17_Chr1g0202371 38.117 223 129 5 169 388 399 615 6.85e-40 151
Msa0793230 MtrunA17_Chr3g0127401 37.295 244 135 8 168 405 82 313 3.43e-39 144
Msa0793230 MtrunA17_Chr3g0127431 38.362 232 129 7 168 393 85 308 3.74e-39 145
Msa0793230 MtrunA17_Chr5g0397121 36.123 227 139 3 169 393 515 737 4.55e-39 149
Msa0793230 MtrunA17_Chr4g0043381 37.168 226 137 2 169 393 839 1060 6.23e-39 149
Msa0793230 MtrunA17_Chr8g0387641 35.683 227 140 3 169 393 523 745 7.23e-39 149
Msa0793230 MtrunA17_Chr1g0195741 37.288 236 136 6 165 393 933 1163 2.39e-38 147
Msa0793230 MtrunA17_Chr3g0116131 37.668 223 130 5 169 387 904 1121 2.65e-37 144
Msa0793230 MtrunA17_Chr3g0135781 45.625 160 83 2 169 328 57 212 2.92e-37 135
Msa0793230 MtrunA17_Chr1g0204031 37.719 228 134 5 169 393 559 781 3.32e-37 144
Msa0793230 MtrunA17_Chr4g0047411 41.905 210 108 4 198 394 207 415 3.44e-37 143
Msa0793230 MtrunA17_Chr1g0202381 37.555 229 133 6 169 393 470 692 2.19e-36 141
Msa0793230 MtrunA17_Chr6g0462581 34.802 227 141 4 169 393 502 723 7.16e-36 140
Msa0793230 MtrunA17_Chr3g0086401 32.258 248 145 3 165 392 383 627 1.16e-34 136
Msa0793230 MtrunA17_Chr3g0086401 33.600 250 146 7 169 406 94 335 1.19e-28 118
Msa0793230 MtrunA17_Chr6g0459561 33.193 238 147 7 161 393 376 606 4.94e-33 131
Msa0793230 MtrunA17_Chr8g0357301 32.911 237 145 4 179 406 481 712 9.38e-33 131
Msa0793230 MtrunA17_Chr1g0168321 41.143 175 100 3 237 408 196 370 5.29e-32 127
Msa0793230 MtrunA17_Chr3g0086411 30.488 246 150 3 165 392 213 455 2.09e-31 125
Msa0793230 MtrunA17_Chr3g0086411 39.869 153 86 2 256 402 8 160 2.18e-20 93.2
Msa0793230 MtrunA17_Chr6g0459551 36.500 200 115 6 152 349 87 276 2.67e-30 121
Msa0793230 MtrunA17_Chr6g0459541 30.142 282 158 8 163 410 38 314 1.02e-28 115
Msa0793230 MtrunA17_Chr2g0289231 33.624 229 133 7 169 387 299 518 1.23e-26 112
Msa0793230 MtrunA17_Chr1g0190401 32.338 201 128 3 151 350 667 860 1.42e-24 107
Msa0793230 MtrunA17_Chr4g0062081 50.633 79 38 1 170 247 10 88 6.20e-24 95.5
Msa0793230 MtrunA17_Chr5g0432391 34.574 188 111 3 242 420 78 262 7.80e-24 102
Msa0793230 MtrunA17_Chr6g0459531 29.119 261 140 10 161 410 61 287 5.13e-19 87.4
Msa0793230 MtrunA17_Chr5g0404291 38.158 152 72 6 203 346 387 524 8.00e-15 76.6
Msa0793230 MtrunA17_Chr6g0450161 35.032 157 94 5 198 353 357 506 1.37e-14 75.9
Msa0793230 MtrunA17_Chr6g0452361 31.313 198 106 7 180 363 7 188 1.45e-14 73.6
Msa0793230 MtrunA17_Chr4g0039781 35.484 155 86 5 203 353 368 512 2.78e-14 74.7
Msa0793230 MtrunA17_Chr6g0466811 34.066 182 98 6 177 345 219 391 5.39e-14 73.6
Msa0793230 MtrunA17_Chr5g0404651 31.792 173 97 7 182 345 229 389 2.99e-13 71.2
Msa0793230 MtrunA17_Chr2g0315911 31.818 154 90 5 193 340 230 374 5.86e-13 70.5
Msa0793230 MtrunA17_Chr6g0452391 31.088 193 100 6 177 345 216 399 2.43e-12 68.6
Msa0793230 MtrunA17_Chr6g0452371 30.612 196 91 7 180 345 221 401 5.76e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0793230 AT3G05530.1 95.283 424 19 1 1 423 1 424 0.0 830
Msa0793230 AT1G09100.1 95.272 423 20 0 1 423 1 423 0.0 822
Msa0793230 AT4G29040.1 46.457 381 182 2 37 416 75 434 3.50e-114 342
Msa0793230 AT2G20140.1 46.457 381 182 2 37 416 75 434 1.30e-113 340
Msa0793230 AT5G19990.2 53.082 292 136 1 124 414 57 348 3.67e-107 321
Msa0793230 AT5G20000.1 53.425 292 135 1 124 414 115 406 7.39e-107 322
Msa0793230 AT5G19990.1 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa0793230 AT5G19990.3 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa0793230 AT1G53750.1 52.542 295 137 1 120 411 115 409 3.06e-105 318
Msa0793230 AT5G58290.1 40.533 375 202 2 48 422 54 407 1.81e-102 310
Msa0793230 AT1G53780.3 45.479 376 174 5 59 423 240 595 2.05e-99 309
Msa0793230 AT1G53780.1 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa0793230 AT1G53780.4 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa0793230 AT1G53780.2 45.479 376 174 5 59 423 262 617 2.57e-99 309
Msa0793230 AT1G45000.1 45.872 327 172 2 97 422 70 392 3.03e-98 299
Msa0793230 AT5G43010.1 45.872 327 172 2 97 422 70 392 3.20e-98 299
Msa0793230 AT1G50250.1 41.154 260 151 2 154 413 247 504 1.22e-60 209
Msa0793230 AT5G42270.1 40.769 260 152 2 154 413 235 492 1.97e-60 209
Msa0793230 AT1G06430.1 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0793230 AT1G06430.3 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0793230 AT1G06430.2 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa0793230 AT2G30950.4 37.324 284 167 2 149 422 210 492 1.48e-59 206
Msa0793230 AT2G30950.1 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0793230 AT2G30950.2 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0793230 AT2G30950.3 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa0793230 AT3G53230.1 41.702 235 137 0 161 395 472 706 2.07e-58 204
Msa0793230 AT3G53230.1 36.304 303 172 6 129 413 151 450 1.53e-56 199
Msa0793230 AT3G09840.1 37.457 291 163 5 129 403 150 437 8.04e-58 203
Msa0793230 AT3G09840.1 41.525 236 137 1 161 395 471 706 1.59e-55 196
Msa0793230 AT1G45000.2 46.635 208 107 1 97 304 70 273 8.34e-58 193
Msa0793230 AT5G03340.1 37.113 291 164 5 129 403 150 437 3.72e-57 201
Msa0793230 AT5G03340.1 41.277 235 138 0 161 395 471 705 4.50e-57 201
Msa0793230 AT5G15250.1 39.773 264 148 2 169 422 223 485 3.78e-56 197
Msa0793230 AT3G02450.1 43.145 248 135 3 163 408 327 570 6.80e-54 189
Msa0793230 AT2G03670.1 41.224 245 141 2 163 404 279 523 3.35e-53 187
Msa0793230 AT2G03670.1 37.083 240 144 3 171 404 23 261 6.98e-45 164
Msa0793230 AT5G64580.1 39.423 312 174 6 111 408 249 559 5.43e-53 190
Msa0793230 AT5G15250.2 36.934 287 147 4 169 422 223 508 1.08e-52 184
Msa0793230 AT3G56690.1 38.889 252 151 2 163 412 717 967 2.97e-52 189
Msa0793230 AT3G56690.1 38.889 252 145 5 148 394 359 606 1.81e-45 169
Msa0793230 AT3G16290.1 41.525 236 137 1 169 404 409 643 6.12e-52 187
Msa0793230 AT3G47060.1 40.650 246 142 3 166 408 321 565 3.09e-51 184
Msa0793230 AT1G07510.1 40.244 246 143 3 169 411 326 570 4.52e-51 184
Msa0793230 AT5G58870.1 42.213 244 133 5 166 404 325 565 5.79e-51 184
Msa0793230 AT5G53170.1 41.736 242 136 2 163 404 355 591 6.78e-51 184
Msa0793230 AT2G26140.1 40.711 253 144 3 169 419 226 474 6.44e-49 177
Msa0793230 AT4G23940.1 36.719 256 153 3 161 408 421 675 6.89e-49 179
Msa0793230 AT2G29080.1 39.184 245 146 2 169 411 321 564 3.44e-48 176
Msa0793230 AT1G03000.1 36.800 250 153 5 158 404 646 893 9.88e-48 175
Msa0793230 AT2G45500.4 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa0793230 AT2G45500.3 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa0793230 AT2G03670.2 37.083 240 144 3 171 404 23 261 4.11e-46 164
Msa0793230 AT2G03670.2 39.860 143 85 1 163 304 279 421 6.19e-27 112
Msa0793230 AT2G45500.2 34.457 267 151 7 161 421 207 455 1.65e-45 164
Msa0793230 AT2G45500.1 34.457 267 151 7 161 421 211 459 1.73e-45 164
Msa0793230 AT2G45500.5 34.457 267 151 7 161 421 217 465 2.12e-45 164
Msa0793230 AT1G05910.1 38.431 255 144 5 168 412 379 630 5.09e-45 167
Msa0793230 AT3G01610.1 37.247 247 140 3 159 394 222 464 6.33e-44 164
Msa0793230 AT3G01610.1 34.934 229 144 3 165 392 523 747 1.64e-35 139
Msa0793230 AT3G15120.2 39.076 238 134 5 164 394 723 956 6.62e-44 164
Msa0793230 AT3G01610.2 37.247 247 140 3 159 394 222 464 7.30e-44 164
Msa0793230 AT3G01610.2 34.934 229 144 3 165 392 523 747 1.68e-35 139
Msa0793230 AT3G15120.1 39.076 238 134 5 164 394 713 946 7.62e-44 164
Msa0793230 AT1G80350.1 39.506 243 132 5 161 394 230 466 1.41e-43 160
Msa0793230 AT5G53540.1 38.793 232 128 7 168 393 85 308 9.36e-43 155
Msa0793230 AT4G27680.1 39.224 232 127 7 168 393 82 305 5.09e-42 153
Msa0793230 AT1G50140.3 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0793230 AT1G50140.1 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0793230 AT1G50140.4 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa0793230 AT1G50140.2 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa0793230 AT1G50140.5 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa0793230 AT5G08470.3 39.496 238 132 5 169 403 834 1062 1.08e-40 155
Msa0793230 AT5G08470.1 39.496 238 132 5 169 403 843 1071 1.11e-40 155
Msa0793230 AT2G27600.1 37.662 231 130 8 161 386 123 344 2.52e-40 149
Msa0793230 AT4G02480.1 37.555 229 134 5 169 393 962 1185 2.94e-40 154
Msa0793230 AT3G19740.1 34.926 272 153 6 169 423 703 967 1.70e-39 151
Msa0793230 AT2G34560.1 36.364 231 143 3 165 394 98 325 2.41e-39 145
Msa0793230 AT2G34560.2 36.364 231 143 3 165 394 107 334 2.73e-39 145
Msa0793230 AT1G02890.1 37.555 229 134 5 169 393 943 1166 4.90e-39 150
Msa0793230 AT4G28000.3 36.123 227 138 4 169 393 519 740 1.11e-37 145
Msa0793230 AT4G28000.2 36.123 227 138 4 169 393 519 740 1.25e-37 145
Msa0793230 AT4G28000.1 36.123 227 138 4 169 393 517 738 1.32e-37 145
Msa0793230 AT4G24860.3 36.771 223 132 5 169 387 817 1034 1.50e-37 145
Msa0793230 AT4G24860.1 36.771 223 132 5 169 387 819 1036 1.60e-37 145
Msa0793230 AT4G24860.4 36.771 223 132 5 169 387 792 1009 1.63e-37 145
Msa0793230 AT4G24860.2 36.771 223 132 5 169 387 815 1032 1.76e-37 145
Msa0793230 AT1G64110.1 33.200 250 154 5 150 393 495 737 7.94e-36 140
Msa0793230 AT1G64110.5 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa0793230 AT1G64110.3 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa0793230 AT1G64110.2 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa0793230 AT1G64110.4 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa0793230 AT3G27120.1 35.294 238 142 7 161 393 394 624 1.85e-35 139
Msa0793230 AT4G04910.1 30.000 440 241 14 17 418 79 489 3.31e-35 138
Msa0793230 AT5G52882.1 34.361 227 142 4 169 393 516 737 3.73e-35 138
Msa0793230 AT1G79560.3 30.769 234 148 3 179 403 501 729 5.27e-30 123
Msa0793230 AT1G79560.2 30.769 234 148 3 179 403 501 729 5.76e-30 123
Msa0793230 AT1G79560.1 30.769 234 148 3 179 403 501 729 6.37e-30 123
Msa0793230 AT1G62130.2 33.333 222 129 5 169 387 745 950 3.79e-29 120
Msa0793230 AT1G62130.1 33.333 222 129 5 169 387 752 957 3.94e-29 120
Msa0793230 AT4G04180.2 32.889 225 134 8 169 384 313 529 6.65e-25 107
Msa0793230 AT4G04180.1 32.889 225 134 8 169 384 318 534 8.82e-25 107
Msa0793230 AT3G04340.1 31.731 208 136 3 145 351 763 965 1.02e-24 107
Msa0793230 AT1G02890.2 32.314 229 118 6 169 393 943 1138 1.19e-24 107
Msa0793230 AT5G08470.2 38.255 149 87 2 169 316 843 987 1.68e-21 97.8
Msa0793230 AT5G16930.1 32.258 217 116 8 144 353 349 541 1.85e-16 82.0
Msa0793230 AT2G18330.1 33.690 187 102 7 164 346 353 521 1.03e-14 76.6
Msa0793230 AT5G40000.1 34.239 184 96 8 177 345 214 387 1.44e-14 75.9
Msa0793230 AT4G36580.1 28.112 249 127 9 175 389 361 591 2.80e-14 75.5
Msa0793230 AT3G03060.1 35.625 160 89 5 198 353 380 529 4.35e-14 74.7
Msa0793230 AT3G28600.2 31.683 202 111 8 177 361 172 363 1.11e-13 72.8
Msa0793230 AT3G28600.1 31.683 202 111 8 177 361 211 402 1.14e-13 73.2
Msa0793230 AT3G28610.1 32.620 187 98 9 193 361 226 402 7.29e-12 67.4
Msa0793230 AT3G28580.1 26.255 259 153 6 138 370 174 420 1.12e-11 67.0

Find 121 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAGCAGATTTGGGAATT+AGG 0.203524 5_3:-5218249 None:intergenic
TCTTCCTCAGCCTCGTCTTC+TGG 0.228963 5_3:-5219208 None:intergenic
TCTAATCACATGATTTATTA+AGG 0.231575 5_3:+5222361 Msa0793230:three_prime_UTR
ATTTAGCACAATAGCAGATT+TGG 0.248087 5_3:-5218257 None:intergenic
CACAACTTTGGAAAACTTAG+AGG 0.253945 5_3:+5218096 None:intergenic
GAATTCAGCAGTAGCTGATT+AGG 0.285247 5_3:-5218224 None:intergenic
AATTGAGACACTTTATAGTT+AGG 0.288375 5_3:-5222435 None:intergenic
CGATGGCTTCAACCAATTCT+TGG 0.292529 5_3:-5219818 None:intergenic
GGCTTGCTTTCTTCTTTGCT+TGG 0.296463 5_3:-5222205 None:intergenic
TCAGAAAAGTGGCATTTGTC+TGG 0.309421 5_3:-5219959 None:intergenic
TAGCAGTGATGACCGAATTA+AGG 0.309822 5_3:+5220772 Msa0793230:CDS
AGGGACTGGGAAAACTTTAA+TGG 0.317454 5_3:+5219920 Msa0793230:CDS
CAAAGATAGTTACTTAATCT+TGG 0.330624 5_3:+5219589 Msa0793230:CDS
ACAATCTTTCTTCCAGTTGT+TGG 0.343456 5_3:+5219518 Msa0793230:CDS
TTAAGGCTTAATACATGCTT+TGG 0.345101 5_3:+5222378 Msa0793230:three_prime_UTR
AGTTCTTCAAAATTTACATC+TGG 0.351709 5_3:-5221338 None:intergenic
GAGTTGCTCAATCAGCTTGA+TGG 0.362416 5_3:+5220746 Msa0793230:CDS
GATCCTGCCCTCATGCGTTC+TGG 0.363815 5_3:+5221135 Msa0793230:CDS
AATTCAGCAGTAGCTGATTA+GGG 0.367587 5_3:-5218223 None:intergenic
CGGTGCTCATATTCGCTAAT+TGG 0.368891 5_3:-5218391 None:intergenic
TAGCTTAAGCATAATAGTTC+AGG 0.374037 5_3:-5222226 None:intergenic
CTAGCTCTTGCTTCTTCAGT+TGG 0.375196 5_3:-5221189 None:intergenic
TTGTGAGTCAAGATCAATAT+TGG 0.376702 5_3:-5219236 None:intergenic
TTTAGCACAATAGCAGATTT+GGG 0.380041 5_3:-5218256 None:intergenic
ATTGAGACACTTTATAGTTA+GGG 0.382503 5_3:-5222434 None:intergenic
AACAATGTTACCAACAAGAT+AGG 0.382812 5_3:-5218674 None:intergenic
GAACATTCATCTTCCTTGAA+TGG 0.391870 5_3:-5221313 None:intergenic
AGAGTCGCAGAGGACGAATC+TGG 0.398430 5_3:+5218585 Msa0793230:CDS
TTGTCAACAGATCCAAGAAT+TGG 0.409458 5_3:+5219806 Msa0793230:intron
AAACAATTACCCTATCTTGT+TGG 0.411929 5_3:+5218664 Msa0793230:CDS
CCCAAGGGAGTGCTCTTATA+TGG 0.412748 5_3:+5219891 Msa0793230:CDS
TAGCTCTTGCTTCTTCAGTT+GGG 0.414601 5_3:-5221188 None:intergenic
GAGGACGAATTCCTAACTTC+TGG 0.415768 5_3:-5219869 None:intergenic
AAATTGAATTGAAATCGATA+TGG 0.423255 5_3:+5218331 Msa0793230:exon
AATTAAGACAAACCTTAATT+CGG 0.426125 5_3:-5220784 None:intergenic
TTGTCTGGGCTGCACAGGCA+CGG 0.428467 5_3:-5219944 None:intergenic
AAGCGCTCTTTGTGGGTCAT+TGG 0.433595 5_3:-5219846 None:intergenic
TTATATGGTCCACCAGGGAC+TGG 0.443181 5_3:+5219906 Msa0793230:CDS
ATAGATGAAATCGATGCAAT+TGG 0.444462 5_3:+5220502 Msa0793230:CDS
CTGTGTTGAGGCTGGCATGT+TGG 0.447123 5_3:+5221406 Msa0793230:CDS
CTTCTGGAAGCGCTCTTTGT+GGG 0.456356 5_3:-5219853 None:intergenic
GTTCTTCAAAATTTACATCT+GGG 0.460201 5_3:-5221337 None:intergenic
CCTCATGCGTTCTGGTCGAT+TGG 0.460311 5_3:+5221143 Msa0793230:CDS
ACCATATAAGAGCACTCCCT+TGG 0.462776 5_3:-5219892 None:intergenic
AAAGAGCGCTTCCAGAAGTT+AGG 0.468454 5_3:+5219858 Msa0793230:CDS
TGAGTATGATTCTAGAGTTA+AGG 0.468971 5_3:+5219625 Msa0793230:CDS
GGGTCAACAAGTCCAACAAC+TGG 0.470215 5_3:-5219530 None:intergenic
AGCAAGAGCTAGAATTCTGC+AGG 0.476446 5_3:+5221200 Msa0793230:CDS
CTTGCTTCTTCAGTTGGGTG+AGG 0.478295 5_3:-5221183 None:intergenic
GAAGTTAGCAGGCCCTCAGC+TGG 0.481435 5_3:+5219980 Msa0793230:CDS
CTAAAACCTGGTGATCTTGT+TGG 0.482397 5_3:+5219560 Msa0793230:CDS
GCAGTGAAGTGAGTGGGGAC+AGG 0.483517 5_3:+5220702 Msa0793230:intron
ACTTCTGGAAGCGCTCTTTG+TGG 0.494928 5_3:-5219854 None:intergenic
TATATGGTCCACCAGGGACT+GGG 0.495384 5_3:+5219907 Msa0793230:CDS
AAGGCTGTCTGTGTTGAGGC+TGG 0.496605 5_3:+5221398 Msa0793230:CDS
CAGAAAAGTGGCATTTGTCT+GGG 0.501348 5_3:-5219958 None:intergenic
AGCAGGCCCTCAGCTGGTCC+AGG 0.505977 5_3:+5219986 Msa0793230:CDS
CCATATAAGAGCACTCCCTT+GGG 0.506740 5_3:-5219891 None:intergenic
TAATAAAATACTTGTGGGAA+AGG 0.510144 5_3:+5218148 Msa0793230:five_prime_UTR
GGCATTTGTCTGGGCTGCAC+AGG 0.513528 5_3:-5219949 None:intergenic
AACTATGTACAGATGTTCAT+AGG 0.516004 5_3:+5220412 Msa0793230:intron
CATTGGTGGATTAGAGAAGC+AGG 0.519493 5_3:+5219688 Msa0793230:CDS
GAAGACGAGGCTGAGGAAGA+TGG 0.522320 5_3:+5219211 Msa0793230:CDS
CGACCAGAACGCATGAGGGC+AGG 0.522529 5_3:-5221138 None:intergenic
TGATCTTGACTCACAAAGGA+AGG 0.522742 5_3:+5219243 Msa0793230:CDS
CGGTCCACAGATGATTTCAA+TGG 0.525527 5_3:+5221365 Msa0793230:CDS
GAATCCAGAAGACGAGGCTG+AGG 0.526999 5_3:+5219204 Msa0793230:CDS
ATGTCATTGTAGTCCTCTGT+TGG 0.531591 5_3:-5219668 None:intergenic
GCCTGCTAACTTCAGAAAAG+TGG 0.540645 5_3:-5219970 None:intergenic
GGATATTTCAGATCCATTCA+AGG 0.542702 5_3:+5221300 Msa0793230:intron
GTGCTCTTATATGGTCCACC+AGG 0.549568 5_3:+5219900 Msa0793230:CDS
TGTCTGGGCTGCACAGGCAC+GGG 0.550265 5_3:-5219943 None:intergenic
CAGTGAAGTGAGTGGGGACA+GGG 0.551580 5_3:+5220703 Msa0793230:intron
GCAGAGGACGAATCTGGAGT+TGG 0.554081 5_3:+5218591 Msa0793230:CDS
CTGATTGAGCAACTCTAACA+TGG 0.557612 5_3:-5220738 None:intergenic
CAACGAGATTCGCATCCTCA+AGG 0.561580 5_3:+5218445 Msa0793230:CDS
AATCGATATGGCGAGCGCAA+TGG 0.565450 5_3:+5218343 Msa0793230:exon
ACAACTTTGGAAAACTTAGA+GGG 0.568619 5_3:+5218097 None:intergenic
GAGGACTACAATGACATTGG+TGG 0.570848 5_3:+5219674 Msa0793230:CDS
ACAATGTTACCAACAAGATA+GGG 0.575470 5_3:-5218673 None:intergenic
GTTAGGAATTCGTCCTCCCA+AGG 0.579890 5_3:+5219875 Msa0793230:CDS
TATTAGTTTAATATTACGAA+AGG 0.582190 5_3:+5218301 Msa0793230:five_prime_UTR
TTTCAATGGAGCACAACTGA+AGG 0.583966 5_3:+5221379 Msa0793230:CDS
TCTTGTTGGTAACATTGTTG+AGG 0.587858 5_3:+5218678 Msa0793230:CDS
AACCACGAGGACTTTAATGA+AGG 0.588663 5_3:+5222170 Msa0793230:CDS
GGTCATACCTGGACCAGCTG+AGG 0.589442 5_3:-5219993 None:intergenic
TTGCGAGTTGGAAAGCATCA+CGG 0.589651 5_3:-5220453 None:intergenic
TTTACACCAACAAGATCACC+AGG 0.590492 5_3:-5219566 None:intergenic
GGATAAGAGAAAGTCTAACT+TGG 0.593340 5_3:+5222298 Msa0793230:three_prime_UTR
GTACAGATGTTCATAGGAGA+CGG 0.594735 5_3:+5220418 Msa0793230:intron
CCAATCGACCAGAACGCATG+AGG 0.596935 5_3:-5221143 None:intergenic
GATCTTGACTCACAAAGGAA+GGG 0.598782 5_3:+5219244 Msa0793230:CDS
ACTCTAGAATCATACTCAGA+AGG 0.604623 5_3:-5219620 None:intergenic
GTCATACCTGGACCAGCTGA+GGG 0.606521 5_3:-5219992 None:intergenic
TTGAGACACTTTATAGTTAG+GGG 0.607025 5_3:-5222433 None:intergenic
CTAATTGCAGTGAAGTGAGT+GGG 0.609083 5_3:+5220696 Msa0793230:intron
TCATCTATAAATATAATGCA+TGG 0.609735 5_3:-5220487 None:intergenic
TGATTCTAGAGTTAAGGCCA+TGG 0.615473 5_3:+5219631 Msa0793230:CDS
GTGGGTCATTGGCAAAACGA+TGG 0.615718 5_3:-5219835 None:intergenic
ACTGAAGGCTGTCTGTGTTG+AGG 0.616412 5_3:+5221394 Msa0793230:CDS
GCTAATTGCAGTGAAGTGAG+TGG 0.625583 5_3:+5220695 Msa0793230:intron
AACAAACCTCAGTTGCATCA+CGG 0.628397 5_3:-5221436 None:intergenic
TACCTTCATTAAAGTCCTCG+TGG 0.630738 5_3:-5222172 None:intergenic
TGCTCCATTGAAATCATCTG+TGG 0.631549 5_3:-5221369 None:intergenic
TATAAGAGCACTCCCTTGGG+AGG 0.633736 5_3:-5219888 None:intergenic
ACAGAGGACTACAATGACAT+TGG 0.634206 5_3:+5219671 Msa0793230:CDS
CAATCGACCAGAACGCATGA+GGG 0.635061 5_3:-5221142 None:intergenic
TCTACGCCGTGATGCAACTG+AGG 0.637539 5_3:+5221430 Msa0793230:CDS
GACCCTGACAAGCTAAAACC+TGG 0.638981 5_3:+5219548 Msa0793230:CDS
TTAGGAATTCGTCCTCCCAA+GGG 0.661598 5_3:+5219876 Msa0793230:CDS
ATATTGATCTTGACTCACAA+AGG 0.667941 5_3:+5219239 Msa0793230:CDS
AGAAGCTCTGACGATATCGT+CGG 0.681839 5_3:-5218411 None:intergenic
TGAAGTGAGTGGGGACAGGG+AGG 0.681980 5_3:+5220706 Msa0793230:CDS
CAACTTTGGAAAACTTAGAG+GGG 0.683705 5_3:+5218098 None:intergenic
GGAAATGAATCCAGAAGACG+AGG 0.689099 5_3:+5219198 Msa0793230:CDS
GGTGAGGAAACTCAATCTTG+CGG 0.696112 5_3:-5221167 None:intergenic
TGATGTAGGAAGAGTCGCAG+AGG 0.711080 5_3:+5218575 Msa0793230:intron
AGTTGATGAAAAGCCAACAG+AGG 0.711108 5_3:+5219655 Msa0793230:CDS
TAATTGCAGTGAAGTGAGTG+GGG 0.713213 5_3:+5220697 Msa0793230:intron
TGCTCTTATATGGTCCACCA+GGG 0.716303 5_3:+5219901 Msa0793230:CDS
TCAAATGTAGGTGAACCACG+AGG 0.808374 5_3:+5222157 Msa0793230:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAATAAAATACTTG+TGG + chr5_3:5218142-5218161 Msa0793230:five_prime_UTR 10.0%
!! AAAAATAATAAAATACTTGT+GGG + chr5_3:5218143-5218162 Msa0793230:five_prime_UTR 10.0%
!! TGAAAAAGAAAAAAAAAATT+GGG - chr5_3:5220583-5220602 None:intergenic 10.0%
!! ATGAAAAAGAAAAAAAAAAT+TGG - chr5_3:5220584-5220603 None:intergenic 10.0%
!! AATTATATATATTTAGAAGT+TGG + chr5_3:5220998-5221017 Msa0793230:intron 10.0%
!!! TTGTTTTATTTATTTTTTTG+AGG + chr5_3:5221249-5221268 Msa0793230:intron 10.0%
!!! TATTAGTTTAATATTACGAA+AGG + chr5_3:5218301-5218320 Msa0793230:five_prime_UTR 15.0%
!! ATTATTTGTATTATTGATGT+AGG + chr5_3:5218561-5218580 Msa0793230:intron 15.0%
!! GGCAAATTAATTTAAAAAAT+TGG + chr5_3:5218943-5218962 Msa0793230:intron 15.0%
!! TCTATATACCTATATATAAA+GGG - chr5_3:5219106-5219125 None:intergenic 15.0%
!! ATCTATATACCTATATATAA+AGG - chr5_3:5219107-5219126 None:intergenic 15.0%
!! ATAACAAACAAATCTTAAAA+TGG - chr5_3:5219367-5219386 None:intergenic 15.0%
!! GAATATATTATTGTTAACTA+AGG - chr5_3:5219422-5219441 None:intergenic 15.0%
!! ACAATAATATATTCATAGTT+AGG + chr5_3:5219428-5219447 Msa0793230:intron 15.0%
!! ATGATTAGAAATATATATGA+TGG - chr5_3:5220044-5220063 None:intergenic 15.0%
!!! ATCATATATATTTCTAATCA+TGG + chr5_3:5220043-5220062 Msa0793230:intron 15.0%
!!! TTTTTTTTTCTTTTTCATTG+TGG + chr5_3:5220586-5220605 Msa0793230:intron 15.0%
!!! CAATCTTATAATTTTTATTG+TGG + chr5_3:5220673-5220692 Msa0793230:intron 15.0%
!! TAAATGAAAACCAATAAATT+TGG - chr5_3:5221026-5221045 None:intergenic 15.0%
!!! TTACCAATAACAATTAATTT+TGG + chr5_3:5221559-5221578 Msa0793230:intron 15.0%
!!! AGAATTTTACTAATTTTAGT+TGG + chr5_3:5221659-5221678 Msa0793230:intron 15.0%
!! ATAAGAAGTAAAATATATGT+TGG - chr5_3:5222094-5222113 None:intergenic 15.0%
!!! TGACATTTATTTACTTATTT+TGG + chr5_3:5222325-5222344 Msa0793230:intron 15.0%
!!! GACATTTATTTACTTATTTT+GGG + chr5_3:5222326-5222345 Msa0793230:intron 15.0%
!!! ACATTTATTTACTTATTTTG+GGG + chr5_3:5222327-5222346 Msa0793230:intron 15.0%
!! AAATTGAATTGAAATCGATA+TGG + chr5_3:5218331-5218350 Msa0793230:exon 20.0%
!! TTATGTAACTTTGTATTGTT+AGG + chr5_3:5218501-5218520 Msa0793230:intron 20.0%
!! TATGTAACTTTGTATTGTTA+GGG + chr5_3:5218502-5218521 Msa0793230:intron 20.0%
!! AATATTGTTCTTATTGTAGT+GGG + chr5_3:5219000-5219019 Msa0793230:intron 20.0%
!!! ACTGATTTTTCTATAATGAA+TGG + chr5_3:5219040-5219059 Msa0793230:intron 20.0%
!! TCTATAATGAATGGTATAAT+TGG + chr5_3:5219049-5219068 Msa0793230:intron 20.0%
!! TAAGTATTCCCTTTATATAT+AGG + chr5_3:5219095-5219114 Msa0793230:intron 20.0%
!! TATAGATTTAGATAATCTTC+TGG + chr5_3:5219120-5219139 Msa0793230:intron 20.0%
!! AATCTTAAAATGGTATGTAT+AGG - chr5_3:5219357-5219376 None:intergenic 20.0%
!! AAAGAAAACTATTGAGTATA+CGG - chr5_3:5219489-5219508 None:intergenic 20.0%
!!! ATGTTTTTATTGTGAATTTG+TGG + chr5_3:5219739-5219758 Msa0793230:intron 20.0%
!! TCAATTGTATTAGAAAATCA+TGG - chr5_3:5220108-5220127 None:intergenic 20.0%
!! AATTGAATAGATGTACAATT+AGG + chr5_3:5220122-5220141 Msa0793230:intron 20.0%
!!! TTGAATTTACATTTTTGCAT+TGG + chr5_3:5220363-5220382 Msa0793230:intron 20.0%
!!! TGAATTTACATTTTTGCATT+GGG + chr5_3:5220364-5220383 Msa0793230:intron 20.0%
!! TCATCTATAAATATAATGCA+TGG - chr5_3:5220490-5220509 None:intergenic 20.0%
!! AATTAAGACAAACCTTAATT+CGG - chr5_3:5220787-5220806 None:intergenic 20.0%
!!! GCATGGTATATTTTTTATTT+AGG + chr5_3:5220816-5220835 Msa0793230:intron 20.0%
!!! TTATTGGTTTTCATTTAGTA+CGG + chr5_3:5221029-5221048 Msa0793230:intron 20.0%
!!! ATTTGATTATTGTTTTCATG+TGG + chr5_3:5221279-5221298 Msa0793230:intron 20.0%
!! TAAATTAGTTGTTCAAAATC+TGG - chr5_3:5221467-5221486 None:intergenic 20.0%
!!! TTATTGGTAATTTACTTCAT+AGG - chr5_3:5221549-5221568 None:intergenic 20.0%
!! CAACCAAAATTAATTGTTAT+TGG - chr5_3:5221565-5221584 None:intergenic 20.0%
!!! CAATAACAATTAATTTTGGT+TGG + chr5_3:5221563-5221582 Msa0793230:intron 20.0%
!! AGTAAAATTCTCTTCAATTA+AGG - chr5_3:5221650-5221669 None:intergenic 20.0%
!!! AAAAAAATTTGAGACTTTAC+AGG + chr5_3:5222277-5222296 Msa0793230:three_prime_UTR 20.0%
!! TCTAATCACATGATTTATTA+AGG + chr5_3:5222361-5222380 Msa0793230:three_prime_UTR 20.0%
!! GAAATCCAAAAATAAGTTAA+TGG - chr5_3:5222405-5222424 None:intergenic 20.0%
!!! CTTATTTTTGGATTTCATTT+TGG + chr5_3:5222409-5222428 Msa0793230:three_prime_UTR 20.0%
! TAATAAAATACTTGTGGGAA+AGG + chr5_3:5218148-5218167 Msa0793230:five_prime_UTR 25.0%
! AAGAATAGAGAGAAGAAAAA+AGG - chr5_3:5218473-5218492 None:intergenic 25.0%
! CAAATAATTCAACCAAAATC+AGG - chr5_3:5218549-5218568 None:intergenic 25.0%
! TATATCTATTTGCTCACATA+TGG + chr5_3:5218881-5218900 Msa0793230:intron 25.0%
! ACATATGGTTATAAACACTA+TGG + chr5_3:5218896-5218915 Msa0793230:intron 25.0%
!! ATACCACAATCGAATAATTT+TGG + chr5_3:5218922-5218941 Msa0793230:intron 25.0%
! CAATATTGTTCTTATTGTAG+TGG + chr5_3:5218999-5219018 Msa0793230:intron 25.0%
! AGAAAAATCAGTGTTACAAT+AGG - chr5_3:5219032-5219051 None:intergenic 25.0%
!!! TTGCTGATAATGGATTTTAA+TGG + chr5_3:5219145-5219164 Msa0793230:intron 25.0%
!!! ATGGATTTTAATGGTTTTTC+TGG + chr5_3:5219154-5219173 Msa0793230:intron 25.0%
!!! TGGATTTTAATGGTTTTTCT+GGG + chr5_3:5219155-5219174 Msa0793230:intron 25.0%
! GCTATGCATAATTTAGATAT+TGG + chr5_3:5219177-5219196 Msa0793230:intron 25.0%
! CAAAGATAGTTACTTAATCT+TGG + chr5_3:5219589-5219608 Msa0793230:CDS 25.0%
! TAAGAAAAAACAGATTCAGA+TGG - chr5_3:5220017-5220036 None:intergenic 25.0%
! TTGACACAAACAATGAAAAA+TGG - chr5_3:5220078-5220097 None:intergenic 25.0%
! ATTGTATTAGAAAATCATGG+AGG - chr5_3:5220105-5220124 None:intergenic 25.0%
! GGGATATTAAAACATAAGAA+TGG - chr5_3:5220298-5220317 None:intergenic 25.0%
!! TCTTAATTTTCTTATCTGCA+TGG + chr5_3:5220799-5220818 Msa0793230:intron 25.0%
!! GTTCTTAAATGCTGTATTTT+AGG + chr5_3:5220898-5220917 Msa0793230:intron 25.0%
! TTGAAGGTCAACAAAATTAT+GGG - chr5_3:5220927-5220946 None:intergenic 25.0%
! ATTGAAGGTCAACAAAATTA+TGG - chr5_3:5220928-5220947 None:intergenic 25.0%
!!! TAAAAAAGTTGGTAGATTGA+AGG - chr5_3:5220943-5220962 None:intergenic 25.0%
! TTGACAAGTGTAAATGAAAA+TGG - chr5_3:5221076-5221095 None:intergenic 25.0%
! GTTCTTCAAAATTTACATCT+GGG - chr5_3:5221340-5221359 None:intergenic 25.0%
! AGTTCTTCAAAATTTACATC+TGG - chr5_3:5221341-5221360 None:intergenic 25.0%
!!! TAAATTTTGAAGAACTAGCT+CGG + chr5_3:5221345-5221364 Msa0793230:CDS 25.0%
! ATATCTTGTAAGATGATTCA+GGG - chr5_3:5221494-5221513 None:intergenic 25.0%
! TATATCTTGTAAGATGATTC+AGG - chr5_3:5221495-5221514 None:intergenic 25.0%
!!! AAAACAAAACTAGCTTGTTA+GGG - chr5_3:5221611-5221630 None:intergenic 25.0%
! AGCTTAATAGTTATACGTTT+AGG + chr5_3:5221894-5221913 Msa0793230:intron 25.0%
! CAAAAATGGCAAAATCATTA+TGG - chr5_3:5222041-5222060 None:intergenic 25.0%
!!! GCACTGATTTAAAACAAAAA+TGG - chr5_3:5222055-5222074 None:intergenic 25.0%
! TGAAACAAAAAGAGATAGAA+AGG - chr5_3:5222140-5222159 None:intergenic 25.0%
!!! TCTCTTTTTGTTTCAAATGT+AGG + chr5_3:5222145-5222164 Msa0793230:intron 25.0%
!!! TTGGTCCATTAACTTATTTT+TGG + chr5_3:5222397-5222416 Msa0793230:three_prime_UTR 25.0%
TTTAGCACAATAGCAGATTT+GGG - chr5_3:5218259-5218278 None:intergenic 30.0%
ATTTAGCACAATAGCAGATT+TGG - chr5_3:5218260-5218279 None:intergenic 30.0%
CTAATAACGTCAATCGAAAT+AGG - chr5_3:5218287-5218306 None:intergenic 30.0%
AAACAATTACCCTATCTTGT+TGG + chr5_3:5218664-5218683 Msa0793230:CDS 30.0%
ACAATGTTACCAACAAGATA+GGG - chr5_3:5218676-5218695 None:intergenic 30.0%
AACAATGTTACCAACAAGAT+AGG - chr5_3:5218677-5218696 None:intergenic 30.0%
!! TAGTGTTGTATGCTGATTTA+GGG + chr5_3:5218817-5218836 Msa0793230:intron 30.0%
!!! ATGCTGATTTAGGGTTTTAT+TGG + chr5_3:5218826-5218845 Msa0793230:intron 30.0%
!!! TGCTGATTTAGGGTTTTATT+GGG + chr5_3:5218827-5218846 Msa0793230:intron 30.0%
TTGCCAAAATTATTCGATTG+TGG - chr5_3:5218928-5218947 None:intergenic 30.0%
TTGTGAGTCAAGATCAATAT+TGG - chr5_3:5219239-5219258 None:intergenic 30.0%
ATATTGATCTTGACTCACAA+AGG + chr5_3:5219239-5219258 Msa0793230:CDS 30.0%
!!! TTTTTTCCCCTTCTGTTTTT+AGG + chr5_3:5219394-5219413 Msa0793230:intron 30.0%
!!! TTTTTCCCCTTCTGTTTTTA+GGG + chr5_3:5219395-5219414 Msa0793230:intron 30.0%
!! TGAGTATGATTCTAGAGTTA+AGG + chr5_3:5219625-5219644 Msa0793230:CDS 30.0%
ACTGAAGATAACAGAAAATC+AGG - chr5_3:5220148-5220167 None:intergenic 30.0%
AAATCTTTGTACAATCAGCA+GGG - chr5_3:5220216-5220235 None:intergenic 30.0%
AAAATCTTTGTACAATCAGC+AGG - chr5_3:5220217-5220236 None:intergenic 30.0%
!! ATTTTCAACACAAACTTGCT+TGG + chr5_3:5220262-5220281 Msa0793230:intron 30.0%
ATGAAGGAAGGAAAAATAGA+GGG - chr5_3:5220323-5220342 None:intergenic 30.0%
AATGAAGGAAGGAAAAATAG+AGG - chr5_3:5220324-5220343 None:intergenic 30.0%
TCAATTTATACAGACAACGA+AGG - chr5_3:5220347-5220366 None:intergenic 30.0%
AACTATGTACAGATGTTCAT+AGG + chr5_3:5220412-5220431 Msa0793230:intron 30.0%
ATAGATGAAATCGATGCAAT+TGG + chr5_3:5220502-5220521 Msa0793230:CDS 30.0%
TACGTATCATAGATGAATAC+TGG + chr5_3:5220848-5220867 Msa0793230:intron 30.0%
! GAAGGTAGTCTTAAAAAAGT+TGG - chr5_3:5220954-5220973 None:intergenic 30.0%
! CTTCAATCTAAAACCTTGAA+GGG + chr5_3:5220970-5220989 Msa0793230:intron 30.0%
ATATAATTAATCGCCCTTCA+AGG - chr5_3:5220986-5221005 None:intergenic 30.0%
GAAGTTGGAACCAAATTTAT+TGG + chr5_3:5221013-5221032 Msa0793230:intron 30.0%
CAAGTGTAAATGAAAATGGA+GGG - chr5_3:5221072-5221091 None:intergenic 30.0%
ACAAGTGTAAATGAAAATGG+AGG - chr5_3:5221073-5221092 None:intergenic 30.0%
!! AAACAAAACTAGCTTGTTAG+GGG - chr5_3:5221610-5221629 None:intergenic 30.0%
!! GAAAACAAAACTAGCTTGTT+AGG - chr5_3:5221612-5221631 None:intergenic 30.0%
TCATTATGGCAACTATAGAA+AGG - chr5_3:5222027-5222046 None:intergenic 30.0%
TAGCTTAAGCATAATAGTTC+AGG - chr5_3:5222229-5222248 None:intergenic 30.0%
TTAAGGCTTAATACATGCTT+TGG + chr5_3:5222378-5222397 Msa0793230:three_prime_UTR 30.0%
AATTCAGCAGTAGCTGATTA+GGG - chr5_3:5218226-5218245 None:intergenic 35.0%
CAATAGCAGATTTGGGAATT+AGG - chr5_3:5218252-5218271 None:intergenic 35.0%
AGAAGAAAAAAGGAACCTTG+AGG - chr5_3:5218463-5218482 None:intergenic 35.0%
! TTTTGTTGCGTTCCTGATTT+TGG + chr5_3:5218534-5218553 Msa0793230:intron 35.0%
!! TCTTGTTGGTAACATTGTTG+AGG + chr5_3:5218678-5218697 Msa0793230:CDS 35.0%
! TACTGTTACTTGCTTTCTGT+TGG + chr5_3:5218713-5218732 Msa0793230:intron 35.0%
!! TTCTGTTGGTAACATTGTTG+AGG + chr5_3:5218727-5218746 Msa0793230:intron 35.0%
!! CTAGTGTTGTATGCTGATTT+AGG + chr5_3:5218816-5218835 Msa0793230:intron 35.0%
!! TCTTCTGGATTTGCTGATAA+TGG + chr5_3:5219135-5219154 Msa0793230:intron 35.0%
!!! TTTTCCCCTTCTGTTTTTAG+GGG + chr5_3:5219396-5219415 Msa0793230:intron 35.0%
ACAATCTTTCTTCCAGTTGT+TGG + chr5_3:5219518-5219537 Msa0793230:CDS 35.0%
!! ACTCTAGAATCATACTCAGA+AGG - chr5_3:5219623-5219642 None:intergenic 35.0%
TTGTCAACAGATCCAAGAAT+TGG + chr5_3:5219806-5219825 Msa0793230:intron 35.0%
AATCTTTGTACAATCAGCAG+GGG - chr5_3:5220215-5220234 None:intergenic 35.0%
GAACATCTGTACATAGTTTC+AGG - chr5_3:5220410-5220429 None:intergenic 35.0%
!! TTGGTACAAAGCGTTTTGAT+AGG + chr5_3:5220521-5220540 Msa0793230:CDS 35.0%
!! GGTATGAAATTTTAGCATGC+AGG + chr5_3:5220542-5220561 Msa0793230:intron 35.0%
!! TCATAGATGAATACTGGCTT+TGG + chr5_3:5220854-5220873 Msa0793230:intron 35.0%
!! CATAGATGAATACTGGCTTT+GGG + chr5_3:5220855-5220874 Msa0793230:intron 35.0%
AAGGTCAACAAAATTATGGG+AGG - chr5_3:5220924-5220943 None:intergenic 35.0%
!!! CCTTCAAGGTTTTAGATTGA+AGG - chr5_3:5220972-5220991 None:intergenic 35.0%
! CCTTCAATCTAAAACCTTGA+AGG + chr5_3:5220969-5220988 Msa0793230:intron 35.0%
CATTTACACTTGTCAATTGC+AGG + chr5_3:5221080-5221099 Msa0793230:intron 35.0%
AACAAAGCAGATGAAGTATG+AGG - chr5_3:5221234-5221253 None:intergenic 35.0%
GGATATTTCAGATCCATTCA+AGG + chr5_3:5221300-5221319 Msa0793230:intron 35.0%
GAACATTCATCTTCCTTGAA+TGG - chr5_3:5221316-5221335 None:intergenic 35.0%
!! TTTTGGTTGGACATTTGTCT+TGG + chr5_3:5221576-5221595 Msa0793230:intron 35.0%
TAATCGCTTGAACTACCAAT+GGG - chr5_3:5221867-5221886 None:intergenic 35.0%
TTAATCGCTTGAACTACCAA+TGG - chr5_3:5221868-5221887 None:intergenic 35.0%
TCTTATATGACCTGTTGATG+TGG + chr5_3:5222108-5222127 Msa0793230:intron 35.0%
CTTATATGACCTGTTGATGT+GGG + chr5_3:5222109-5222128 Msa0793230:intron 35.0%
GGATAAGAGAAAGTCTAACT+TGG + chr5_3:5222298-5222317 Msa0793230:three_prime_UTR 35.0%
GAATTCAGCAGTAGCTGATT+AGG - chr5_3:5218227-5218246 None:intergenic 40.0%
TGATCTTGACTCACAAAGGA+AGG + chr5_3:5219243-5219262 Msa0793230:CDS 40.0%
GATCTTGACTCACAAAGGAA+GGG + chr5_3:5219244-5219263 Msa0793230:CDS 40.0%
GCTAAAAACATCTACTCGAC+AGG + chr5_3:5219279-5219298 Msa0793230:CDS 40.0%
ACCATTCATAACGTTTCGAG+TGG + chr5_3:5219310-5219329 Msa0793230:intron 40.0%
TCCACTCGAAACGTTATGAA+TGG - chr5_3:5219314-5219333 None:intergenic 40.0%
TAAGGCCCCTAAAAACAGAA+GGG - chr5_3:5219404-5219423 None:intergenic 40.0%
CTAAAACCTGGTGATCTTGT+TGG + chr5_3:5219560-5219579 Msa0793230:CDS 40.0%
TTTACACCAACAAGATCACC+AGG - chr5_3:5219569-5219588 None:intergenic 40.0%
!! TGATTCTAGAGTTAAGGCCA+TGG + chr5_3:5219631-5219650 Msa0793230:CDS 40.0%
! TGGCTTTTCATCAACTTCCA+TGG - chr5_3:5219651-5219670 None:intergenic 40.0%
!! AGTTGATGAAAAGCCAACAG+AGG + chr5_3:5219655-5219674 Msa0793230:CDS 40.0%
ATGTCATTGTAGTCCTCTGT+TGG - chr5_3:5219671-5219690 None:intergenic 40.0%
ACAGAGGACTACAATGACAT+TGG + chr5_3:5219671-5219690 Msa0793230:CDS 40.0%
TTTGTGGCCAGTGATATAAC+TGG + chr5_3:5219755-5219774 Msa0793230:intron 40.0%
GATCCATCCAGTTATATCAC+TGG - chr5_3:5219765-5219784 None:intergenic 40.0%
! ATTAAAGTTTTCCCAGTCCC+TGG - chr5_3:5219921-5219940 None:intergenic 40.0%
AGGGACTGGGAAAACTTTAA+TGG + chr5_3:5219920-5219939 Msa0793230:CDS 40.0%
CAGAAAAGTGGCATTTGTCT+GGG - chr5_3:5219961-5219980 None:intergenic 40.0%
TCAGAAAAGTGGCATTTGTC+TGG - chr5_3:5219962-5219981 None:intergenic 40.0%
ATCTTTGTACAATCAGCAGG+GGG - chr5_3:5220214-5220233 None:intergenic 40.0%
GGAAGGAAAAATAGAGGGAT+GGG - chr5_3:5220318-5220337 None:intergenic 40.0%
AGGAAGGAAAAATAGAGGGA+TGG - chr5_3:5220319-5220338 None:intergenic 40.0%
TACAGACAACGAAGGAATGA+AGG - chr5_3:5220339-5220358 None:intergenic 40.0%
GTACAGATGTTCATAGGAGA+CGG + chr5_3:5220418-5220437 Msa0793230:intron 40.0%
! GTGACTTTTCTTTTGCGAGT+TGG - chr5_3:5220468-5220487 None:intergenic 40.0%
CTAATTGCAGTGAAGTGAGT+GGG + chr5_3:5220696-5220715 Msa0793230:intron 40.0%
TAATTGCAGTGAAGTGAGTG+GGG + chr5_3:5220697-5220716 Msa0793230:intron 40.0%
CTGATTGAGCAACTCTAACA+TGG - chr5_3:5220741-5220760 None:intergenic 40.0%
TAGCAGTGATGACCGAATTA+AGG + chr5_3:5220772-5220791 Msa0793230:CDS 40.0%
TAGCTCTTGCTTCTTCAGTT+GGG - chr5_3:5221191-5221210 None:intergenic 40.0%
TGCTCCATTGAAATCATCTG+TGG - chr5_3:5221372-5221391 None:intergenic 40.0%
TTTCAATGGAGCACAACTGA+AGG + chr5_3:5221379-5221398 Msa0793230:CDS 40.0%
AACAAACCTCAGTTGCATCA+CGG - chr5_3:5221439-5221458 None:intergenic 40.0%
CTTCATCATAATCCGAGCAT+AGG + chr5_3:5221832-5221851 Msa0793230:intron 40.0%
AAGGAAATTCCCACATCAAC+AGG - chr5_3:5222121-5222140 None:intergenic 40.0%
AACCACGAGGACTTTAATGA+AGG + chr5_3:5222170-5222189 Msa0793230:CDS 40.0%
TACCTTCATTAAAGTCCTCG+TGG - chr5_3:5222175-5222194 None:intergenic 40.0%
CGGTGCTCATATTCGCTAAT+TGG - chr5_3:5218394-5218413 None:intergenic 45.0%
! AGAAGCTCTGACGATATCGT+CGG - chr5_3:5218414-5218433 None:intergenic 45.0%
GGAAATGAATCCAGAAGACG+AGG + chr5_3:5219198-5219217 Msa0793230:CDS 45.0%
AAGGCCCCTAAAAACAGAAG+GGG - chr5_3:5219403-5219422 None:intergenic 45.0%
CTAAGGCCCCTAAAAACAGA+AGG - chr5_3:5219405-5219424 None:intergenic 45.0%
!!! CACCAGGTTTTAGCTTGTCA+GGG - chr5_3:5219553-5219572 None:intergenic 45.0%
!!! TCACCAGGTTTTAGCTTGTC+AGG - chr5_3:5219554-5219573 None:intergenic 45.0%
GAGGACTACAATGACATTGG+TGG + chr5_3:5219674-5219693 Msa0793230:CDS 45.0%
!! CATTGGTGGATTAGAGAAGC+AGG + chr5_3:5219688-5219707 Msa0793230:CDS 45.0%
TGGCCAGTGATATAACTGGA+TGG + chr5_3:5219759-5219778 Msa0793230:intron 45.0%
CGATGGCTTCAACCAATTCT+TGG - chr5_3:5219821-5219840 None:intergenic 45.0%
!! AAAGAGCGCTTCCAGAAGTT+AGG + chr5_3:5219858-5219877 Msa0793230:CDS 45.0%
GAGGACGAATTCCTAACTTC+TGG - chr5_3:5219872-5219891 None:intergenic 45.0%
TTAGGAATTCGTCCTCCCAA+GGG + chr5_3:5219876-5219895 Msa0793230:CDS 45.0%
!! CCATATAAGAGCACTCCCTT+GGG - chr5_3:5219894-5219913 None:intergenic 45.0%
!! ACCATATAAGAGCACTCCCT+TGG - chr5_3:5219895-5219914 None:intergenic 45.0%
TGCTCTTATATGGTCCACCA+GGG + chr5_3:5219901-5219920 Msa0793230:CDS 45.0%
!!! GCCACTTTTCTGAAGTTAGC+AGG + chr5_3:5219969-5219988 Msa0793230:CDS 45.0%
GCCTGCTAACTTCAGAAAAG+TGG - chr5_3:5219973-5219992 None:intergenic 45.0%
CAGATTCAGATGGTCATACC+TGG - chr5_3:5220007-5220026 None:intergenic 45.0%
GACAACGAAGGAATGAAGGA+AGG - chr5_3:5220335-5220354 None:intergenic 45.0%
!! TTGCGAGTTGGAAAGCATCA+CGG - chr5_3:5220456-5220475 None:intergenic 45.0%
GCTAATTGCAGTGAAGTGAG+TGG + chr5_3:5220695-5220714 Msa0793230:intron 45.0%
GAGTTGCTCAATCAGCTTGA+TGG + chr5_3:5220746-5220765 Msa0793230:CDS 45.0%
GGTGAGGAAACTCAATCTTG+CGG - chr5_3:5221170-5221189 None:intergenic 45.0%
! CTAGCTCTTGCTTCTTCAGT+TGG - chr5_3:5221192-5221211 None:intergenic 45.0%
AGCAAGAGCTAGAATTCTGC+AGG + chr5_3:5221200-5221219 Msa0793230:CDS 45.0%
GAGCTAGAATTCTGCAGGTT+TGG + chr5_3:5221205-5221224 Msa0793230:intron 45.0%
CGGTCCACAGATGATTTCAA+TGG + chr5_3:5221365-5221384 Msa0793230:CDS 45.0%
ACACACACACACACACACAA+TGG + chr5_3:5221802-5221821 Msa0793230:intron 45.0%
!!! CATAGGTTTTAGCTGCCCAT+TGG + chr5_3:5221849-5221868 Msa0793230:intron 45.0%
TCAAATGTAGGTGAACCACG+AGG + chr5_3:5222157-5222176 Msa0793230:intron 45.0%
! GGCTTGCTTTCTTCTTTGCT+TGG - chr5_3:5222208-5222227 None:intergenic 45.0%
AATCGATATGGCGAGCGCAA+TGG + chr5_3:5218343-5218362 Msa0793230:exon 50.0%
CAACGAGATTCGCATCCTCA+AGG + chr5_3:5218445-5218464 Msa0793230:CDS 50.0%
TGATGTAGGAAGAGTCGCAG+AGG + chr5_3:5218575-5218594 Msa0793230:intron 50.0%
GGGTCAACAAGTCCAACAAC+TGG - chr5_3:5219533-5219552 None:intergenic 50.0%
GACCCTGACAAGCTAAAACC+TGG + chr5_3:5219548-5219567 Msa0793230:CDS 50.0%
GTGGGTCATTGGCAAAACGA+TGG - chr5_3:5219838-5219857 None:intergenic 50.0%
AAGCGCTCTTTGTGGGTCAT+TGG - chr5_3:5219849-5219868 None:intergenic 50.0%
!! CTTCTGGAAGCGCTCTTTGT+GGG - chr5_3:5219856-5219875 None:intergenic 50.0%
!! ACTTCTGGAAGCGCTCTTTG+TGG - chr5_3:5219857-5219876 None:intergenic 50.0%
GTTAGGAATTCGTCCTCCCA+AGG + chr5_3:5219875-5219894 Msa0793230:CDS 50.0%
!! TATAAGAGCACTCCCTTGGG+AGG - chr5_3:5219891-5219910 None:intergenic 50.0%
!! CCCAAGGGAGTGCTCTTATA+TGG + chr5_3:5219891-5219910 Msa0793230:CDS 50.0%
GTGCTCTTATATGGTCCACC+AGG + chr5_3:5219900-5219919 Msa0793230:CDS 50.0%
TTATATGGTCCACCAGGGAC+TGG + chr5_3:5219906-5219925 Msa0793230:CDS 50.0%
TATATGGTCCACCAGGGACT+GGG + chr5_3:5219907-5219926 Msa0793230:CDS 50.0%
! AAAGTTTTCCCAGTCCCTGG+TGG - chr5_3:5219918-5219937 None:intergenic 50.0%
CAATCGACCAGAACGCATGA+GGG - chr5_3:5221145-5221164 None:intergenic 50.0%
CTTGCTTCTTCAGTTGGGTG+AGG - chr5_3:5221186-5221205 None:intergenic 50.0%
ACTGAAGGCTGTCTGTGTTG+AGG + chr5_3:5221394-5221413 Msa0793230:CDS 50.0%
CACACACACACAATGGAGCA+TGG + chr5_3:5221809-5221828 Msa0793230:intron 50.0%
GGGCAGCTAAAACCTATGCT+CGG - chr5_3:5221847-5221866 None:intergenic 50.0%
AGAGTCGCAGAGGACGAATC+TGG + chr5_3:5218585-5218604 Msa0793230:CDS 55.0%
! GCAGAGGACGAATCTGGAGT+TGG + chr5_3:5218591-5218610 Msa0793230:CDS 55.0%
GAATCCAGAAGACGAGGCTG+AGG + chr5_3:5219204-5219223 Msa0793230:CDS 55.0%
TCTTCCTCAGCCTCGTCTTC+TGG - chr5_3:5219211-5219230 None:intergenic 55.0%
GAAGACGAGGCTGAGGAAGA+TGG + chr5_3:5219211-5219230 Msa0793230:CDS 55.0%
GTCATACCTGGACCAGCTGA+GGG - chr5_3:5219995-5220014 None:intergenic 55.0%
CAGTGAAGTGAGTGGGGACA+GGG + chr5_3:5220703-5220722 Msa0793230:intron 55.0%
CCAATCGACCAGAACGCATG+AGG - chr5_3:5221146-5221165 None:intergenic 55.0%
CCTCATGCGTTCTGGTCGAT+TGG + chr5_3:5221143-5221162 Msa0793230:CDS 55.0%
AAGGCTGTCTGTGTTGAGGC+TGG + chr5_3:5221398-5221417 Msa0793230:CDS 55.0%
CTGTGTTGAGGCTGGCATGT+TGG + chr5_3:5221406-5221425 Msa0793230:CDS 55.0%
TCTACGCCGTGATGCAACTG+AGG + chr5_3:5221430-5221449 Msa0793230:CDS 55.0%
TTGTCTGGGCTGCACAGGCA+CGG - chr5_3:5219947-5219966 None:intergenic 60.0%
GGCATTTGTCTGGGCTGCAC+AGG - chr5_3:5219952-5219971 None:intergenic 60.0%
GAAGTTAGCAGGCCCTCAGC+TGG + chr5_3:5219980-5219999 Msa0793230:CDS 60.0%
GGTCATACCTGGACCAGCTG+AGG - chr5_3:5219996-5220015 None:intergenic 60.0%
GCAGTGAAGTGAGTGGGGAC+AGG + chr5_3:5220702-5220721 Msa0793230:intron 60.0%
TGAAGTGAGTGGGGACAGGG+AGG + chr5_3:5220706-5220725 Msa0793230:CDS 60.0%
GATCCTGCCCTCATGCGTTC+TGG + chr5_3:5221135-5221154 Msa0793230:CDS 60.0%
TGTCTGGGCTGCACAGGCAC+GGG - chr5_3:5219946-5219965 None:intergenic 65.0%
CGACCAGAACGCATGAGGGC+AGG - chr5_3:5221141-5221160 None:intergenic 65.0%
AGCAGGCCCTCAGCTGGTCC+AGG + chr5_3:5219986-5220005 Msa0793230:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 5218108 5222444 5218108 ID=Msa0793230;Name=Msa0793230
chr5_3 mRNA 5218108 5222444 5218108 ID=Msa0793230-mRNA-1;Parent=Msa0793230;Name=Msa0793230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=220|1|1|1|0.81|0.66|12|174|423
chr5_3 exon 5218108 5218270 5218108 ID=Msa0793230-mRNA-1:exon:1997;Parent=Msa0793230-mRNA-1
chr5_3 exon 5218293 5218466 5218293 ID=Msa0793230-mRNA-1:exon:1998;Parent=Msa0793230-mRNA-1
chr5_3 exon 5218583 5218699 5218583 ID=Msa0793230-mRNA-1:exon:1999;Parent=Msa0793230-mRNA-1
chr5_3 exon 5219193 5219300 5219193 ID=Msa0793230-mRNA-1:exon:2000;Parent=Msa0793230-mRNA-1
chr5_3 exon 5219518 5219709 5219518 ID=Msa0793230-mRNA-1:exon:2001;Parent=Msa0793230-mRNA-1
chr5_3 exon 5219816 5220007 5219816 ID=Msa0793230-mRNA-1:exon:2002;Parent=Msa0793230-mRNA-1
chr5_3 exon 5220424 5220542 5220424 ID=Msa0793230-mRNA-1:exon:2003;Parent=Msa0793230-mRNA-1
chr5_3 exon 5220706 5220793 5220706 ID=Msa0793230-mRNA-1:exon:2004;Parent=Msa0793230-mRNA-1
chr5_3 exon 5221102 5221221 5221102 ID=Msa0793230-mRNA-1:exon:2005;Parent=Msa0793230-mRNA-1
chr5_3 exon 5221311 5221451 5221311 ID=Msa0793230-mRNA-1:exon:2006;Parent=Msa0793230-mRNA-1
chr5_3 exon 5222167 5222319 5222167 ID=Msa0793230-mRNA-1:exon:2007;Parent=Msa0793230-mRNA-1
chr5_3 exon 5222346 5222444 5222346 ID=Msa0793230-mRNA-1:exon:2008;Parent=Msa0793230-mRNA-1
chr5_3 five_prime_UTR 5218108 5218270 5218108 ID=Msa0793230-mRNA-1:five_prime_utr;Parent=Msa0793230-mRNA-1
chr5_3 five_prime_UTR 5218293 5218349 5218293 ID=Msa0793230-mRNA-1:five_prime_utr;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5218350 5218466 5218350 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5218583 5218699 5218583 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5219193 5219300 5219193 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5219518 5219709 5219518 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5219816 5220007 5219816 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5220424 5220542 5220424 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5220706 5220793 5220706 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5221102 5221221 5221102 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5221311 5221451 5221311 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 CDS 5222167 5222244 5222167 ID=Msa0793230-mRNA-1:cds;Parent=Msa0793230-mRNA-1
chr5_3 three_prime_UTR 5222245 5222319 5222245 ID=Msa0793230-mRNA-1:three_prime_utr;Parent=Msa0793230-mRNA-1
chr5_3 three_prime_UTR 5222346 5222444 5222346 ID=Msa0793230-mRNA-1:three_prime_utr;Parent=Msa0793230-mRNA-1
Gene Sequence

>Msa0793230

ATGGCGAGCGCAATGGTAGAAGATGCTAACTTTGAAGATGACCAATTAGCGAATATGAGCACCGACGATATCGTCAGAGCTTCTCGTCTTCTCGACAACGAGATTCGCATCCTCAAGGAAGAGTCGCAGAGGACGAATCTGGAGTTGGAATCGTATAAAGAGAAGATTAAAGAGAATCAAGAGAAAATTAAGCTTAATAAACAATTACCCTATCTTGTTGGTAACATTGTTGAGATATTGGAAATGAATCCAGAAGACGAGGCTGAGGAAGATGGTGCCAATATTGATCTTGACTCACAAAGGAAGGGAAAATGTGTTGTGCTAAAAACATCTACTCGACAGACAATCTTTCTTCCAGTTGTTGGACTTGTTGACCCTGACAAGCTAAAACCTGGTGATCTTGTTGGTGTAAACAAAGATAGTTACTTAATCTTGGATACTCTGCCTTCTGAGTATGATTCTAGAGTTAAGGCCATGGAAGTTGATGAAAAGCCAACAGAGGACTACAATGACATTGGTGGATTAGAGAAGCAGATCCAAGAATTGGTTGAAGCCATCGTTTTGCCAATGACCCACAAAGAGCGCTTCCAGAAGTTAGGAATTCGTCCTCCCAAGGGAGTGCTCTTATATGGTCCACCAGGGACTGGGAAAACTTTAATGGCCCGTGCCTGTGCAGCCCAGACAAATGCCACTTTTCTGAAGTTAGCAGGCCCTCAGCTGGTCCAGATGTTCATAGGAGACGGAGCAAAACTTGTCCGTGATGCTTTCCAACTCGCAAAAGAAAAGTCACCATGCATTATATTTATAGATGAAATCGATGCAATTGGTACAAAGCGTTTTGATAGTGAAGTGAGTGGGGACAGGGAGGTTCAAAGAACCATGTTAGAGTTGCTCAATCAGCTTGATGGTTTTAGCAGTGATGACCGAATTAAGGTGATAGCAGCAACAAATCGTGCAGATATTCTTGATCCTGCCCTCATGCGTTCTGGTCGATTGGACCGCAAGATTGAGTTTCCTCACCCAACTGAAGAAGCAAGAGCTAGAATTCTGCAGATCCATTCAAGGAAGATGAATGTTCACCCAGATGTAAATTTTGAAGAACTAGCTCGGTCCACAGATGATTTCAATGGAGCACAACTGAAGGCTGTCTGTGTTGAGGCTGGCATGTTGGCTCTACGCCGTGATGCAACTGAGGTGAACCACGAGGACTTTAATGAAGGTATAATTCAAGTCCAAGCAAAGAAGAAAGCAAGCCTGAACTATTATGCTTAA
Protein sequence

>Msa0793230

MASAMVEDANFEDDQLANMSTDDIVRASRLLDNEIRILKEESQRTNLELESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA*