AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1462050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462050 MtrunA17_Chr1g0192151 100.000 423 0 0 1 423 1 423 0.0 863
Msa1462050 MtrunA17_Chr4g0014731 98.815 422 5 0 2 423 3 424 0.0 852
Msa1462050 MtrunA17_Chr1g0182711 44.670 394 186 3 34 416 65 437 3.52e-113 339
Msa1462050 MtrunA17_Chr7g0262801 45.669 381 185 2 37 416 77 436 4.12e-112 336
Msa1462050 MtrunA17_Chr4g0050561 52.740 292 137 1 124 414 113 404 3.61e-106 320
Msa1462050 MtrunA17_Chr8g0345461 52.542 295 137 1 120 411 115 409 1.69e-105 318
Msa1462050 MtrunA17_Chr1g0200081 52.203 295 137 2 120 411 125 418 1.95e-102 311
Msa1462050 MtrunA17_Chr3g0145011 46.201 329 171 2 97 423 73 397 1.88e-98 300
Msa1462050 MtrunA17_Chr3g0141901 45.872 327 172 2 97 422 70 392 2.34e-97 296
Msa1462050 MtrunA17_Chr3g0108321 43.421 304 151 2 48 351 61 343 2.33e-88 273
Msa1462050 MtrunA17_Chr3g0143721 41.538 260 150 2 154 413 237 494 7.61e-61 209
Msa1462050 MtrunA17_Chr4g0052411 41.036 251 147 1 169 419 231 480 2.77e-60 207
Msa1462050 MtrunA17_Chr2g0297281 40.152 264 147 2 169 422 288 550 1.94e-59 206
Msa1462050 MtrunA17_Chr7g0217421 39.051 274 158 3 150 418 20 289 3.14e-59 198
Msa1462050 MtrunA17_Chr1g0180791 41.702 235 137 0 161 395 472 706 9.39e-59 205
Msa1462050 MtrunA17_Chr1g0180791 41.702 235 134 2 169 403 207 438 1.62e-57 202
Msa1462050 MtrunA17_Chr7g0264521 41.702 235 137 0 161 395 473 707 1.28e-58 205
Msa1462050 MtrunA17_Chr7g0264521 41.277 235 135 2 169 403 208 439 5.94e-57 200
Msa1462050 MtrunA17_Chr2g0327121 41.702 235 137 0 161 395 474 708 2.64e-58 204
Msa1462050 MtrunA17_Chr2g0327121 36.304 303 177 5 101 403 154 440 5.98e-56 197
Msa1462050 MtrunA17_Chr7g0255721 41.667 252 144 2 163 412 681 931 5.90e-55 196
Msa1462050 MtrunA17_Chr7g0255721 35.065 231 144 3 167 396 386 611 9.70e-35 137
Msa1462050 MtrunA17_Chr2g0331161 43.220 236 133 1 169 404 417 651 9.69e-55 194
Msa1462050 MtrunA17_Chr5g0429571 39.552 268 153 4 149 408 290 556 1.28e-53 191
Msa1462050 MtrunA17_Chr6g0456351 42.857 245 134 3 166 408 316 556 1.86e-53 187
Msa1462050 MtrunA17_Chr4g0031821 41.152 243 139 3 169 408 322 563 3.37e-53 190
Msa1462050 MtrunA17_Chr7g0255691 41.803 244 140 1 163 404 282 525 7.39e-53 185
Msa1462050 MtrunA17_Chr7g0255691 33.600 250 158 4 172 417 22 267 1.48e-33 132
Msa1462050 MtrunA17_Chr3g0094871 38.776 245 147 2 169 411 13 256 1.25e-52 182
Msa1462050 MtrunA17_Chr8g0362771 43.460 237 131 2 169 405 239 472 4.12e-52 186
Msa1462050 MtrunA17_Chr7g0255651 39.394 231 140 0 163 393 278 508 6.22e-52 183
Msa1462050 MtrunA17_Chr7g0255651 29.032 248 164 5 174 417 24 263 5.35e-22 98.6
Msa1462050 MtrunA17_Chr7g0248361 40.741 243 140 4 169 408 194 435 8.97e-52 184
Msa1462050 MtrunA17_Chr3g0129971 40.613 261 148 4 154 408 283 542 2.15e-51 185
Msa1462050 MtrunA17_Chr8g0388371 38.281 256 149 3 161 408 398 652 3.45e-51 185
Msa1462050 MtrunA17_Chr7g0260601 38.889 252 146 4 162 408 235 483 4.02e-51 182
Msa1462050 MtrunA17_Chr7g0255901 38.247 251 150 5 158 405 630 878 5.70e-50 181
Msa1462050 MtrunA17_Chr3g0135721 42.797 236 131 2 169 404 226 457 1.45e-49 178
Msa1462050 MtrunA17_Chr3g0104211 41.152 243 137 4 166 404 303 543 1.94e-49 179
Msa1462050 MtrunA17_Chr1g0158881 43.578 218 118 2 163 380 325 537 2.93e-49 178
Msa1462050 MtrunA17_Chr6g0476861 38.525 244 144 4 169 408 199 440 3.33e-48 174
Msa1462050 MtrunA17_Chr7g0255641 37.597 258 158 2 163 418 654 910 3.87e-48 176
Msa1462050 MtrunA17_Chr7g0255641 36.486 222 115 7 206 411 432 643 2.00e-31 127
Msa1462050 MtrunA17_Chr3g0135761 42.553 235 131 2 170 404 225 455 4.33e-48 174
Msa1462050 MtrunA17_Chr7g0246111 36.704 267 151 6 130 393 184 435 5.55e-47 168
Msa1462050 MtrunA17_Chr4g0033451 38.583 254 145 5 156 403 371 619 1.62e-45 169
Msa1462050 MtrunA17_Chr4g0004121 39.344 244 131 6 161 394 236 472 3.68e-43 158
Msa1462050 MtrunA17_Chr2g0316851 37.872 235 137 4 167 395 594 825 3.98e-43 162
Msa1462050 MtrunA17_Chr4g0026631 39.130 230 128 8 161 386 121 342 5.18e-43 156
Msa1462050 MtrunA17_Chr5g0432631 38.039 255 151 3 169 420 231 481 1.75e-42 159
Msa1462050 MtrunA17_Chr4g0052271 37.037 243 140 7 165 402 117 351 1.37e-41 151
Msa1462050 MtrunA17_Chr2g0277831 38.494 239 137 4 169 402 245 478 3.78e-41 155
Msa1462050 MtrunA17_Chr2g0277831 34.348 230 146 2 165 392 531 757 3.39e-40 152
Msa1462050 MtrunA17_Chr2g0327231 42.331 163 94 0 165 327 344 506 5.41e-41 152
Msa1462050 MtrunA17_Chr2g0327231 32.051 156 89 3 101 256 100 238 6.54e-20 92.0
Msa1462050 MtrunA17_Chr2g0321241 37.555 229 133 7 161 386 126 347 8.16e-41 150
Msa1462050 MtrunA17_Chr5g0432641 36.466 266 156 5 144 404 167 424 1.03e-40 153
Msa1462050 MtrunA17_Chr4g0038101 39.286 224 127 5 169 388 723 941 1.17e-40 154
Msa1462050 MtrunA17_Chr1g0195731 37.991 229 133 5 169 393 936 1159 3.02e-40 153
Msa1462050 MtrunA17_Chr1g0202371 38.117 223 129 5 169 388 399 615 6.85e-40 151
Msa1462050 MtrunA17_Chr3g0127401 37.295 244 135 8 168 405 82 313 3.43e-39 144
Msa1462050 MtrunA17_Chr3g0127431 38.362 232 129 7 168 393 85 308 3.74e-39 145
Msa1462050 MtrunA17_Chr5g0397121 36.123 227 139 3 169 393 515 737 4.55e-39 149
Msa1462050 MtrunA17_Chr4g0043381 37.168 226 137 2 169 393 839 1060 6.23e-39 149
Msa1462050 MtrunA17_Chr8g0387641 35.683 227 140 3 169 393 523 745 7.23e-39 149
Msa1462050 MtrunA17_Chr1g0195741 37.288 236 136 6 165 393 933 1163 2.39e-38 147
Msa1462050 MtrunA17_Chr3g0116131 37.668 223 130 5 169 387 904 1121 2.65e-37 144
Msa1462050 MtrunA17_Chr3g0135781 45.625 160 83 2 169 328 57 212 2.92e-37 135
Msa1462050 MtrunA17_Chr1g0204031 37.719 228 134 5 169 393 559 781 3.32e-37 144
Msa1462050 MtrunA17_Chr4g0047411 41.905 210 108 4 198 394 207 415 3.44e-37 143
Msa1462050 MtrunA17_Chr1g0202381 37.555 229 133 6 169 393 470 692 2.19e-36 141
Msa1462050 MtrunA17_Chr6g0462581 34.802 227 141 4 169 393 502 723 7.16e-36 140
Msa1462050 MtrunA17_Chr3g0086401 32.258 248 145 3 165 392 383 627 1.16e-34 136
Msa1462050 MtrunA17_Chr3g0086401 33.600 250 146 7 169 406 94 335 1.19e-28 118
Msa1462050 MtrunA17_Chr6g0459561 33.193 238 147 7 161 393 376 606 4.94e-33 131
Msa1462050 MtrunA17_Chr8g0357301 32.911 237 145 4 179 406 481 712 9.38e-33 131
Msa1462050 MtrunA17_Chr1g0168321 41.143 175 100 3 237 408 196 370 5.29e-32 127
Msa1462050 MtrunA17_Chr3g0086411 30.488 246 150 3 165 392 213 455 2.09e-31 125
Msa1462050 MtrunA17_Chr3g0086411 39.869 153 86 2 256 402 8 160 2.18e-20 93.2
Msa1462050 MtrunA17_Chr6g0459551 36.500 200 115 6 152 349 87 276 2.67e-30 121
Msa1462050 MtrunA17_Chr6g0459541 30.142 282 158 8 163 410 38 314 1.02e-28 115
Msa1462050 MtrunA17_Chr2g0289231 33.624 229 133 7 169 387 299 518 1.23e-26 112
Msa1462050 MtrunA17_Chr1g0190401 32.338 201 128 3 151 350 667 860 1.42e-24 107
Msa1462050 MtrunA17_Chr4g0062081 50.633 79 38 1 170 247 10 88 6.20e-24 95.5
Msa1462050 MtrunA17_Chr5g0432391 34.574 188 111 3 242 420 78 262 7.80e-24 102
Msa1462050 MtrunA17_Chr6g0459531 29.119 261 140 10 161 410 61 287 5.13e-19 87.4
Msa1462050 MtrunA17_Chr5g0404291 38.158 152 72 6 203 346 387 524 8.00e-15 76.6
Msa1462050 MtrunA17_Chr6g0450161 35.032 157 94 5 198 353 357 506 1.37e-14 75.9
Msa1462050 MtrunA17_Chr6g0452361 31.313 198 106 7 180 363 7 188 1.45e-14 73.6
Msa1462050 MtrunA17_Chr4g0039781 35.484 155 86 5 203 353 368 512 2.78e-14 74.7
Msa1462050 MtrunA17_Chr6g0466811 34.066 182 98 6 177 345 219 391 5.39e-14 73.6
Msa1462050 MtrunA17_Chr5g0404651 31.792 173 97 7 182 345 229 389 2.99e-13 71.2
Msa1462050 MtrunA17_Chr2g0315911 31.818 154 90 5 193 340 230 374 5.86e-13 70.5
Msa1462050 MtrunA17_Chr6g0452391 31.088 193 100 6 177 345 216 399 2.43e-12 68.6
Msa1462050 MtrunA17_Chr6g0452371 30.612 196 91 7 180 345 221 401 5.76e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1462050 AT3G05530.1 95.283 424 19 1 1 423 1 424 0.0 830
Msa1462050 AT1G09100.1 95.272 423 20 0 1 423 1 423 0.0 822
Msa1462050 AT4G29040.1 46.457 381 182 2 37 416 75 434 3.50e-114 342
Msa1462050 AT2G20140.1 46.457 381 182 2 37 416 75 434 1.30e-113 340
Msa1462050 AT5G19990.2 53.082 292 136 1 124 414 57 348 3.67e-107 321
Msa1462050 AT5G20000.1 53.425 292 135 1 124 414 115 406 7.39e-107 322
Msa1462050 AT5G19990.1 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa1462050 AT5G19990.3 53.082 292 136 1 124 414 115 406 1.68e-106 321
Msa1462050 AT1G53750.1 52.542 295 137 1 120 411 115 409 3.06e-105 318
Msa1462050 AT5G58290.1 40.533 375 202 2 48 422 54 407 1.81e-102 310
Msa1462050 AT1G53780.3 45.479 376 174 5 59 423 240 595 2.05e-99 309
Msa1462050 AT1G53780.1 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa1462050 AT1G53780.4 45.479 376 174 5 59 423 241 596 2.32e-99 308
Msa1462050 AT1G53780.2 45.479 376 174 5 59 423 262 617 2.57e-99 309
Msa1462050 AT1G45000.1 45.872 327 172 2 97 422 70 392 3.03e-98 299
Msa1462050 AT5G43010.1 45.872 327 172 2 97 422 70 392 3.20e-98 299
Msa1462050 AT1G50250.1 41.154 260 151 2 154 413 247 504 1.22e-60 209
Msa1462050 AT5G42270.1 40.769 260 152 2 154 413 235 492 1.97e-60 209
Msa1462050 AT1G06430.1 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa1462050 AT1G06430.3 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa1462050 AT1G06430.2 40.152 264 147 2 169 422 219 481 2.16e-60 208
Msa1462050 AT2G30950.4 37.324 284 167 2 149 422 210 492 1.48e-59 206
Msa1462050 AT2G30950.1 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa1462050 AT2G30950.2 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa1462050 AT2G30950.3 37.324 284 167 2 149 422 206 488 1.53e-59 206
Msa1462050 AT3G53230.1 41.702 235 137 0 161 395 472 706 2.07e-58 204
Msa1462050 AT3G53230.1 36.304 303 172 6 129 413 151 450 1.53e-56 199
Msa1462050 AT3G09840.1 37.457 291 163 5 129 403 150 437 8.04e-58 203
Msa1462050 AT3G09840.1 41.525 236 137 1 161 395 471 706 1.59e-55 196
Msa1462050 AT1G45000.2 46.635 208 107 1 97 304 70 273 8.34e-58 193
Msa1462050 AT5G03340.1 37.113 291 164 5 129 403 150 437 3.72e-57 201
Msa1462050 AT5G03340.1 41.277 235 138 0 161 395 471 705 4.50e-57 201
Msa1462050 AT5G15250.1 39.773 264 148 2 169 422 223 485 3.78e-56 197
Msa1462050 AT3G02450.1 43.145 248 135 3 163 408 327 570 6.80e-54 189
Msa1462050 AT2G03670.1 41.224 245 141 2 163 404 279 523 3.35e-53 187
Msa1462050 AT2G03670.1 37.083 240 144 3 171 404 23 261 6.98e-45 164
Msa1462050 AT5G64580.1 39.423 312 174 6 111 408 249 559 5.43e-53 190
Msa1462050 AT5G15250.2 36.934 287 147 4 169 422 223 508 1.08e-52 184
Msa1462050 AT3G56690.1 38.889 252 151 2 163 412 717 967 2.97e-52 189
Msa1462050 AT3G56690.1 38.889 252 145 5 148 394 359 606 1.81e-45 169
Msa1462050 AT3G16290.1 41.525 236 137 1 169 404 409 643 6.12e-52 187
Msa1462050 AT3G47060.1 40.650 246 142 3 166 408 321 565 3.09e-51 184
Msa1462050 AT1G07510.1 40.244 246 143 3 169 411 326 570 4.52e-51 184
Msa1462050 AT5G58870.1 42.213 244 133 5 166 404 325 565 5.79e-51 184
Msa1462050 AT5G53170.1 41.736 242 136 2 163 404 355 591 6.78e-51 184
Msa1462050 AT2G26140.1 40.711 253 144 3 169 419 226 474 6.44e-49 177
Msa1462050 AT4G23940.1 36.719 256 153 3 161 408 421 675 6.89e-49 179
Msa1462050 AT2G29080.1 39.184 245 146 2 169 411 321 564 3.44e-48 176
Msa1462050 AT1G03000.1 36.800 250 153 5 158 404 646 893 9.88e-48 175
Msa1462050 AT2G45500.4 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa1462050 AT2G45500.3 34.457 267 151 7 161 421 74 322 1.30e-46 164
Msa1462050 AT2G03670.2 37.083 240 144 3 171 404 23 261 4.11e-46 164
Msa1462050 AT2G03670.2 39.860 143 85 1 163 304 279 421 6.19e-27 112
Msa1462050 AT2G45500.2 34.457 267 151 7 161 421 207 455 1.65e-45 164
Msa1462050 AT2G45500.1 34.457 267 151 7 161 421 211 459 1.73e-45 164
Msa1462050 AT2G45500.5 34.457 267 151 7 161 421 217 465 2.12e-45 164
Msa1462050 AT1G05910.1 38.431 255 144 5 168 412 379 630 5.09e-45 167
Msa1462050 AT3G01610.1 37.247 247 140 3 159 394 222 464 6.33e-44 164
Msa1462050 AT3G01610.1 34.934 229 144 3 165 392 523 747 1.64e-35 139
Msa1462050 AT3G15120.2 39.076 238 134 5 164 394 723 956 6.62e-44 164
Msa1462050 AT3G01610.2 37.247 247 140 3 159 394 222 464 7.30e-44 164
Msa1462050 AT3G01610.2 34.934 229 144 3 165 392 523 747 1.68e-35 139
Msa1462050 AT3G15120.1 39.076 238 134 5 164 394 713 946 7.62e-44 164
Msa1462050 AT1G80350.1 39.506 243 132 5 161 394 230 466 1.41e-43 160
Msa1462050 AT5G53540.1 38.793 232 128 7 168 393 85 308 9.36e-43 155
Msa1462050 AT4G27680.1 39.224 232 127 7 168 393 82 305 5.09e-42 153
Msa1462050 AT1G50140.3 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa1462050 AT1G50140.1 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa1462050 AT1G50140.4 39.732 224 126 5 169 388 713 931 4.25e-41 156
Msa1462050 AT1G50140.2 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa1462050 AT1G50140.5 39.732 224 126 5 169 388 691 909 4.56e-41 156
Msa1462050 AT5G08470.3 39.496 238 132 5 169 403 834 1062 1.08e-40 155
Msa1462050 AT5G08470.1 39.496 238 132 5 169 403 843 1071 1.11e-40 155
Msa1462050 AT2G27600.1 37.662 231 130 8 161 386 123 344 2.52e-40 149
Msa1462050 AT4G02480.1 37.555 229 134 5 169 393 962 1185 2.94e-40 154
Msa1462050 AT3G19740.1 34.926 272 153 6 169 423 703 967 1.70e-39 151
Msa1462050 AT2G34560.1 36.364 231 143 3 165 394 98 325 2.41e-39 145
Msa1462050 AT2G34560.2 36.364 231 143 3 165 394 107 334 2.73e-39 145
Msa1462050 AT1G02890.1 37.555 229 134 5 169 393 943 1166 4.90e-39 150
Msa1462050 AT4G28000.3 36.123 227 138 4 169 393 519 740 1.11e-37 145
Msa1462050 AT4G28000.2 36.123 227 138 4 169 393 519 740 1.25e-37 145
Msa1462050 AT4G28000.1 36.123 227 138 4 169 393 517 738 1.32e-37 145
Msa1462050 AT4G24860.3 36.771 223 132 5 169 387 817 1034 1.50e-37 145
Msa1462050 AT4G24860.1 36.771 223 132 5 169 387 819 1036 1.60e-37 145
Msa1462050 AT4G24860.4 36.771 223 132 5 169 387 792 1009 1.63e-37 145
Msa1462050 AT4G24860.2 36.771 223 132 5 169 387 815 1032 1.76e-37 145
Msa1462050 AT1G64110.1 33.200 250 154 5 150 393 495 737 7.94e-36 140
Msa1462050 AT1G64110.5 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa1462050 AT1G64110.3 33.200 250 154 5 150 393 498 740 8.05e-36 140
Msa1462050 AT1G64110.2 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa1462050 AT1G64110.4 33.200 250 154 5 150 393 500 742 8.15e-36 140
Msa1462050 AT3G27120.1 35.294 238 142 7 161 393 394 624 1.85e-35 139
Msa1462050 AT4G04910.1 30.000 440 241 14 17 418 79 489 3.31e-35 138
Msa1462050 AT5G52882.1 34.361 227 142 4 169 393 516 737 3.73e-35 138
Msa1462050 AT1G79560.3 30.769 234 148 3 179 403 501 729 5.27e-30 123
Msa1462050 AT1G79560.2 30.769 234 148 3 179 403 501 729 5.76e-30 123
Msa1462050 AT1G79560.1 30.769 234 148 3 179 403 501 729 6.37e-30 123
Msa1462050 AT1G62130.2 33.333 222 129 5 169 387 745 950 3.79e-29 120
Msa1462050 AT1G62130.1 33.333 222 129 5 169 387 752 957 3.94e-29 120
Msa1462050 AT4G04180.2 32.889 225 134 8 169 384 313 529 6.65e-25 107
Msa1462050 AT4G04180.1 32.889 225 134 8 169 384 318 534 8.82e-25 107
Msa1462050 AT3G04340.1 31.731 208 136 3 145 351 763 965 1.02e-24 107
Msa1462050 AT1G02890.2 32.314 229 118 6 169 393 943 1138 1.19e-24 107
Msa1462050 AT5G08470.2 38.255 149 87 2 169 316 843 987 1.68e-21 97.8
Msa1462050 AT5G16930.1 32.258 217 116 8 144 353 349 541 1.85e-16 82.0
Msa1462050 AT2G18330.1 33.690 187 102 7 164 346 353 521 1.03e-14 76.6
Msa1462050 AT5G40000.1 34.239 184 96 8 177 345 214 387 1.44e-14 75.9
Msa1462050 AT4G36580.1 28.112 249 127 9 175 389 361 591 2.80e-14 75.5
Msa1462050 AT3G03060.1 35.625 160 89 5 198 353 380 529 4.35e-14 74.7
Msa1462050 AT3G28600.2 31.683 202 111 8 177 361 172 363 1.11e-13 72.8
Msa1462050 AT3G28600.1 31.683 202 111 8 177 361 211 402 1.14e-13 73.2
Msa1462050 AT3G28610.1 32.620 187 98 9 193 361 226 402 7.29e-12 67.4
Msa1462050 AT3G28580.1 26.255 259 153 6 138 370 174 420 1.12e-11 67.0

Find 118 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAGCAGATTTGGGAATT+AGG 0.203524 tig0041894:-502 None:intergenic
TCTTCCTCAGCCTCGTCTTC+TGG 0.228963 tig0041894:-1412 None:intergenic
ATTTAGCACAATAGCAGATT+TGG 0.248087 tig0041894:-510 None:intergenic
CACAACTTTGGAAAACTTAG+AGG 0.253945 tig0041894:+349 None:intergenic
GAATTCAGCAGTAGCTGATT+AGG 0.285247 tig0041894:-477 None:intergenic
CGATGGCTTCAACCAATTCT+TGG 0.292529 tig0041894:-2022 None:intergenic
GGCTTGCTTTCTTCTTTGCT+TGG 0.296463 tig0041894:-4411 None:intergenic
TCAGAAAAGTGGCATTTGTC+TGG 0.309421 tig0041894:-2163 None:intergenic
TAGCAGTGATGACCGAATTA+AGG 0.309822 tig0041894:+2976 Msa1462050:CDS
AGGGACTGGGAAAACTTTAA+TGG 0.317454 tig0041894:+2124 Msa1462050:CDS
CAAAGATAGTTACTTAATCT+TGG 0.330624 tig0041894:+1793 Msa1462050:CDS
AATTGATTACATTACGATCT+TGG 0.339157 tig0041894:-11145 None:intergenic
ACAATCTTTCTTCCAGTTGT+TGG 0.343456 tig0041894:+1722 Msa1462050:CDS
AGTTCTTCAAAATTTACATC+TGG 0.351709 tig0041894:-3542 None:intergenic
GAGTTGCTCAATCAGCTTGA+TGG 0.362416 tig0041894:+2950 Msa1462050:CDS
GATCCTGCCCTCATGCGTTC+TGG 0.363815 tig0041894:+3339 Msa1462050:CDS
AATTCAGCAGTAGCTGATTA+GGG 0.367587 tig0041894:-476 None:intergenic
CGGTGCTCATATTCGCTAAT+TGG 0.368891 tig0041894:-644 None:intergenic
TAGCTTAAGCATAATAGTTC+AGG 0.374037 tig0041894:-4432 None:intergenic
CTAGCTCTTGCTTCTTCAGT+TGG 0.375196 tig0041894:-3393 None:intergenic
TTGTGAGTCAAGATCAATAT+TGG 0.376702 tig0041894:-1440 None:intergenic
TTTAGCACAATAGCAGATTT+GGG 0.380041 tig0041894:-509 None:intergenic
AACAATGTTACCAACAAGAT+AGG 0.382812 tig0041894:-927 None:intergenic
GAACATTCATCTTCCTTGAA+TGG 0.391870 tig0041894:-3517 None:intergenic
AGAGTCGCAGAGGACGAATC+TGG 0.398430 tig0041894:+838 Msa1462050:CDS
TTGTCAACAGATCCAAGAAT+TGG 0.409458 tig0041894:+2010 Msa1462050:intron
AAACAATTACCCTATCTTGT+TGG 0.411929 tig0041894:+917 Msa1462050:CDS
CCCAAGGGAGTGCTCTTATA+TGG 0.412748 tig0041894:+2095 Msa1462050:CDS
TAGCTCTTGCTTCTTCAGTT+GGG 0.414601 tig0041894:-3392 None:intergenic
GAGGACGAATTCCTAACTTC+TGG 0.415768 tig0041894:-2073 None:intergenic
AAATTGAATTGAAATCGATA+TGG 0.423255 tig0041894:+584 Msa1462050:exon
AATTAAGACAAACCTTAATT+CGG 0.426125 tig0041894:-2988 None:intergenic
TTGTCTGGGCTGCACAGGCA+CGG 0.428467 tig0041894:-2148 None:intergenic
AAGCGCTCTTTGTGGGTCAT+TGG 0.433595 tig0041894:-2050 None:intergenic
TTATATGGTCCACCAGGGAC+TGG 0.443181 tig0041894:+2110 Msa1462050:CDS
ATAGATGAAATCGATGCAAT+TGG 0.444462 tig0041894:+2706 Msa1462050:CDS
CTGTGTTGAGGCTGGCATGT+TGG 0.447123 tig0041894:+3610 Msa1462050:CDS
CTTCTGGAAGCGCTCTTTGT+GGG 0.456356 tig0041894:-2057 None:intergenic
GTTCTTCAAAATTTACATCT+GGG 0.460201 tig0041894:-3541 None:intergenic
CCTCATGCGTTCTGGTCGAT+TGG 0.460311 tig0041894:+3347 Msa1462050:CDS
ACCATATAAGAGCACTCCCT+TGG 0.462776 tig0041894:-2096 None:intergenic
AAAGAGCGCTTCCAGAAGTT+AGG 0.468454 tig0041894:+2062 Msa1462050:CDS
TGAGTATGATTCTAGAGTTA+AGG 0.468971 tig0041894:+1829 Msa1462050:CDS
GGGTCAACAAGTCCAACAAC+TGG 0.470215 tig0041894:-1734 None:intergenic
AGCAAGAGCTAGAATTCTGC+AGG 0.476446 tig0041894:+3404 Msa1462050:CDS
CTTGCTTCTTCAGTTGGGTG+AGG 0.478295 tig0041894:-3387 None:intergenic
GAAGTTAGCAGGCCCTCAGC+TGG 0.481435 tig0041894:+2184 Msa1462050:CDS
CTAAAACCTGGTGATCTTGT+TGG 0.482397 tig0041894:+1764 Msa1462050:CDS
GCAGTGAAGTGAGTGGGGAC+AGG 0.483517 tig0041894:+2906 Msa1462050:intron
ACTTCTGGAAGCGCTCTTTG+TGG 0.494928 tig0041894:-2058 None:intergenic
TATATGGTCCACCAGGGACT+GGG 0.495384 tig0041894:+2111 Msa1462050:CDS
AAGGCTGTCTGTGTTGAGGC+TGG 0.496605 tig0041894:+3602 Msa1462050:CDS
CAGAAAAGTGGCATTTGTCT+GGG 0.501348 tig0041894:-2162 None:intergenic
AGCAGGCCCTCAGCTGGTCC+AGG 0.505977 tig0041894:+2190 Msa1462050:CDS
CCATATAAGAGCACTCCCTT+GGG 0.506740 tig0041894:-2095 None:intergenic
ACGATCTTGGCAAGCTACAT+AGG 0.508959 tig0041894:-11132 None:intergenic
TAATAAAATACTTGTGGGAA+AGG 0.510144 tig0041894:+401 Msa1462050:five_prime_UTR
GGCATTTGTCTGGGCTGCAC+AGG 0.513528 tig0041894:-2153 None:intergenic
AACTATGTACAGATGTTCAT+AGG 0.516004 tig0041894:+2616 Msa1462050:intron
CATTGGTGGATTAGAGAAGC+AGG 0.519493 tig0041894:+1892 Msa1462050:CDS
GAAGACGAGGCTGAGGAAGA+TGG 0.522320 tig0041894:+1415 Msa1462050:CDS
CGACCAGAACGCATGAGGGC+AGG 0.522529 tig0041894:-3342 None:intergenic
TGATCTTGACTCACAAAGGA+AGG 0.522742 tig0041894:+1447 Msa1462050:CDS
CGGTCCACAGATGATTTCAA+TGG 0.525527 tig0041894:+3569 Msa1462050:CDS
GAATCCAGAAGACGAGGCTG+AGG 0.526999 tig0041894:+1408 Msa1462050:CDS
ATGTCATTGTAGTCCTCTGT+TGG 0.531591 tig0041894:-1872 None:intergenic
GCCTGCTAACTTCAGAAAAG+TGG 0.540645 tig0041894:-2174 None:intergenic
GGATATTTCAGATCCATTCA+AGG 0.542702 tig0041894:+3504 Msa1462050:intron
GTGCTCTTATATGGTCCACC+AGG 0.549568 tig0041894:+2104 Msa1462050:CDS
TGTCTGGGCTGCACAGGCAC+GGG 0.550265 tig0041894:-2147 None:intergenic
CAGTGAAGTGAGTGGGGACA+GGG 0.551580 tig0041894:+2907 Msa1462050:intron
GCAGAGGACGAATCTGGAGT+TGG 0.554081 tig0041894:+844 Msa1462050:CDS
CTGATTGAGCAACTCTAACA+TGG 0.557612 tig0041894:-2942 None:intergenic
CAACGAGATTCGCATCCTCA+AGG 0.561580 tig0041894:+698 Msa1462050:CDS
AATCGATATGGCGAGCGCAA+TGG 0.565450 tig0041894:+596 Msa1462050:exon
ACAACTTTGGAAAACTTAGA+GGG 0.568619 tig0041894:+350 None:intergenic
GAGGACTACAATGACATTGG+TGG 0.570848 tig0041894:+1878 Msa1462050:CDS
ACAATGTTACCAACAAGATA+GGG 0.575470 tig0041894:-926 None:intergenic
GTTAGGAATTCGTCCTCCCA+AGG 0.579890 tig0041894:+2079 Msa1462050:CDS
TATTAGTTTAATATTACGAA+AGG 0.582190 tig0041894:+554 Msa1462050:five_prime_UTR
TTTCAATGGAGCACAACTGA+AGG 0.583966 tig0041894:+3583 Msa1462050:CDS
TCTTGTTGGTAACATTGTTG+AGG 0.587858 tig0041894:+931 Msa1462050:CDS
AACCACGAGGACTTTAATGA+AGG 0.588663 tig0041894:+4376 Msa1462050:CDS
GGTCATACCTGGACCAGCTG+AGG 0.589442 tig0041894:-2197 None:intergenic
TTGCGAGTTGGAAAGCATCA+CGG 0.589651 tig0041894:-2657 None:intergenic
TTTACACCAACAAGATCACC+AGG 0.590492 tig0041894:-1770 None:intergenic
GGATAAGAGAAAGTCTAACT+TGG 0.593340 tig0041894:+4504 Msa1462050:three_prime_UTR
GTACAGATGTTCATAGGAGA+CGG 0.594735 tig0041894:+2622 Msa1462050:intron
CCAATCGACCAGAACGCATG+AGG 0.596935 tig0041894:-3347 None:intergenic
GATCTTGACTCACAAAGGAA+GGG 0.598782 tig0041894:+1448 Msa1462050:CDS
ACTCTAGAATCATACTCAGA+AGG 0.604623 tig0041894:-1824 None:intergenic
GTCATACCTGGACCAGCTGA+GGG 0.606521 tig0041894:-2196 None:intergenic
CTAATTGCAGTGAAGTGAGT+GGG 0.609083 tig0041894:+2900 Msa1462050:intron
TCATCTATAAATATAATGCA+TGG 0.609735 tig0041894:-2691 None:intergenic
TGATTCTAGAGTTAAGGCCA+TGG 0.615473 tig0041894:+1835 Msa1462050:CDS
GTGGGTCATTGGCAAAACGA+TGG 0.615718 tig0041894:-2039 None:intergenic
ACTGAAGGCTGTCTGTGTTG+AGG 0.616412 tig0041894:+3598 Msa1462050:CDS
GCTAATTGCAGTGAAGTGAG+TGG 0.625583 tig0041894:+2899 Msa1462050:intron
AACAAACCTCAGTTGCATCA+CGG 0.628397 tig0041894:-3640 None:intergenic
TACCTTCATTAAAGTCCTCG+TGG 0.630738 tig0041894:-4378 None:intergenic
TGCTCCATTGAAATCATCTG+TGG 0.631549 tig0041894:-3573 None:intergenic
TATAAGAGCACTCCCTTGGG+AGG 0.633736 tig0041894:-2092 None:intergenic
ACAGAGGACTACAATGACAT+TGG 0.634206 tig0041894:+1875 Msa1462050:CDS
CAATCGACCAGAACGCATGA+GGG 0.635061 tig0041894:-3346 None:intergenic
TCTACGCCGTGATGCAACTG+AGG 0.637539 tig0041894:+3634 Msa1462050:CDS
GACCCTGACAAGCTAAAACC+TGG 0.638981 tig0041894:+1752 Msa1462050:CDS
TTAGGAATTCGTCCTCCCAA+GGG 0.661598 tig0041894:+2080 Msa1462050:CDS
ATATTGATCTTGACTCACAA+AGG 0.667941 tig0041894:+1443 Msa1462050:CDS
AGAAGCTCTGACGATATCGT+CGG 0.681839 tig0041894:-664 None:intergenic
TGAAGTGAGTGGGGACAGGG+AGG 0.681980 tig0041894:+2910 Msa1462050:CDS
CAACTTTGGAAAACTTAGAG+GGG 0.683705 tig0041894:+351 None:intergenic
GGAAATGAATCCAGAAGACG+AGG 0.689099 tig0041894:+1402 Msa1462050:CDS
GGTGAGGAAACTCAATCTTG+CGG 0.696112 tig0041894:-3371 None:intergenic
TGATGTAGGAAGAGTCGCAG+AGG 0.711080 tig0041894:+828 Msa1462050:intron
AGTTGATGAAAAGCCAACAG+AGG 0.711108 tig0041894:+1859 Msa1462050:CDS
TAATTGCAGTGAAGTGAGTG+GGG 0.713213 tig0041894:+2901 Msa1462050:intron
TGCTCTTATATGGTCCACCA+GGG 0.716303 tig0041894:+2105 Msa1462050:CDS
TCAAATGTAGGTGAACCACG+AGG 0.808374 tig0041894:+4363 Msa1462050:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAATAAAATACTTG+TGG + tig0041894:395-414 Msa1462050:five_prime_UTR 10.0%
!! AAAAATAATAAAATACTTGT+GGG + tig0041894:396-415 Msa1462050:five_prime_UTR 10.0%
!! TGAAAAAGAAAAAAAAAATT+GGG - tig0041894:2787-2806 None:intergenic 10.0%
!! ATGAAAAAGAAAAAAAAAAT+TGG - tig0041894:2788-2807 None:intergenic 10.0%
!! AATTATATATATTTAGAAGT+TGG + tig0041894:3202-3221 Msa1462050:intron 10.0%
!! AGTAAAGATTATTTATTTAT+GGG + tig0041894:6776-6795 Msa1462050:intron 10.0%
!!! TTCTTTTTGAAAATATATTT+AGG + tig0041894:8356-8375 Msa1462050:intron 10.0%
!!! AATTATATCTTTTATGTTTT+TGG - tig0041894:9805-9824 None:intergenic 10.0%
!!! TATTAGTTTAATATTACGAA+AGG + tig0041894:554-573 Msa1462050:five_prime_UTR 15.0%
!! ATTATTTGTATTATTGATGT+AGG + tig0041894:814-833 Msa1462050:intron 15.0%
!! GGCAAATTAATTTAAAAAAT+TGG + tig0041894:1147-1166 Msa1462050:intron 15.0%
!! TCTATATACCTATATATAAA+GGG - tig0041894:1310-1329 None:intergenic 15.0%
!! ATCTATATACCTATATATAA+AGG - tig0041894:1311-1330 None:intergenic 15.0%
!! ATAACAAACAAATCTTAAAA+TGG - tig0041894:1571-1590 None:intergenic 15.0%
!! GAATATATTATTGTTAACTA+AGG - tig0041894:1626-1645 None:intergenic 15.0%
!! ACAATAATATATTCATAGTT+AGG + tig0041894:1632-1651 Msa1462050:intron 15.0%
!! ATGATTAGAAATATATATGA+TGG - tig0041894:2248-2267 None:intergenic 15.0%
!!! ATCATATATATTTCTAATCA+TGG + tig0041894:2247-2266 Msa1462050:intron 15.0%
!!! TTTTTTTTTCTTTTTCATTG+TGG + tig0041894:2790-2809 Msa1462050:intron 15.0%
!!! CAATCTTATAATTTTTATTG+TGG + tig0041894:2877-2896 Msa1462050:intron 15.0%
!! TAAATGAAAACCAATAAATT+TGG - tig0041894:3230-3249 None:intergenic 15.0%
!!! TTGTTCTATTTATTTTTTTG+AGG + tig0041894:3453-3472 Msa1462050:intron 15.0%
!!! TTACCAATAACAATTAATTT+TGG + tig0041894:3763-3782 Msa1462050:intron 15.0%
!!! AGAATTTTACTAATTTTAGT+TGG + tig0041894:3863-3882 Msa1462050:intron 15.0%
!! ATAAGAAGTAAAATATATGT+TGG - tig0041894:4300-4319 None:intergenic 15.0%
!!! TGACATTTATTTACTTATTT+TGG + tig0041894:4531-4550 Msa1462050:intron 15.0%
!!! GACATTTATTTACTTATTTT+GGG + tig0041894:4532-4551 Msa1462050:intron 15.0%
!!! ACATTTATTTACTTATTTTG+GGG + tig0041894:4533-4552 Msa1462050:intron 15.0%
!! GTAAATTAAAAAATTTAGTG+AGG - tig0041894:4770-4789 None:intergenic 15.0%
!!! TTTTATTTTTTAGGATATTC+TGG - tig0041894:4939-4958 None:intergenic 15.0%
!! AAAAAATTGAGAAAATCAAA+AGG + tig0041894:5084-5103 Msa1462050:intron 15.0%
!! AAATGCATATCATAAAAATA+AGG + tig0041894:5125-5144 Msa1462050:intron 15.0%
!!! AATATTATTTTTGACGTTTA+TGG + tig0041894:5605-5624 Msa1462050:intron 15.0%
!!! TAATAATTATTGATTCGATT+TGG + tig0041894:6015-6034 Msa1462050:intron 15.0%
!! TTTAATATTAGTATTGTGTT+TGG - tig0041894:6339-6358 None:intergenic 15.0%
!! CAGTAAAGATTATTTATTTA+TGG + tig0041894:6775-6794 Msa1462050:intron 15.0%
!!! TTATCTTTCATCTTTTTATT+TGG - tig0041894:7019-7038 Msa1462060:intron 15.0%
!! CTAATTTATGAACATATATT+TGG + tig0041894:7378-7397 Msa1462050:intron 15.0%
!!! ATATTAGAGATTATTGTTTT+TGG - tig0041894:7592-7611 Msa1462060:intron 15.0%
!!! AATTATTTAAAACTAAAGTG+AGG + tig0041894:7917-7936 Msa1462050:intron 15.0%
!! AGAAAAGAAAAAACTTAAAA+AGG + tig0041894:8743-8762 Msa1462050:intron 15.0%
!!! AAATTATCTTTTGATTAAGT+TGG - tig0041894:8873-8892 None:intergenic 15.0%
!!! ATTTTTTAAGAGAGAAAAAT+AGG + tig0041894:9039-9058 Msa1462050:intron 15.0%
!!! TTTTTTAAGAGAGAAAAATA+GGG + tig0041894:9040-9059 Msa1462050:intron 15.0%
!!! AAGAGATAAAATTGTATTTT+TGG + tig0041894:9321-9340 Msa1462050:intron 15.0%
!! TAACAAAAAATAATACTTCA+AGG - tig0041894:9475-9494 None:intergenic 15.0%
!! TTGTTATAAAAGAAACAAAA+TGG + tig0041894:9489-9508 Msa1462050:intron 15.0%
!!! GATTATAGAAAAATTTGTTT+TGG + tig0041894:9599-9618 Msa1462050:intron 15.0%
!! ATATTTATACATAGAATAAG+TGG - tig0041894:10032-10051 None:intergenic 15.0%
!!! ACATTTACTTACTTAATTTT+GGG + tig0041894:11069-11088 Msa1462050:intron 15.0%
!! AAATAAACAAATCAAGTAAT+TGG - tig0041894:11108-11127 None:intergenic 15.0%
!! AAATTGAATTGAAATCGATA+TGG + tig0041894:584-603 Msa1462050:exon 20.0%
!! TTATGTAACTTTGTATTGTT+AGG + tig0041894:754-773 Msa1462050:intron 20.0%
!! TATGTAACTTTGTATTGTTA+GGG + tig0041894:755-774 Msa1462050:intron 20.0%
!! AATATTGTTCTTATTGTAGT+GGG + tig0041894:1204-1223 Msa1462050:intron 20.0%
!!! ACTGATTTTTCTATAATGAA+TGG + tig0041894:1244-1263 Msa1462050:intron 20.0%
!! TCTATAATGAATGGTATAAT+TGG + tig0041894:1253-1272 Msa1462050:intron 20.0%
!! TAAGTATTCCCTTTATATAT+AGG + tig0041894:1299-1318 Msa1462050:intron 20.0%
!! TATAGATTTAGATAATCTTC+TGG + tig0041894:1324-1343 Msa1462050:intron 20.0%
!! AATCTTAAAATGGTATGTAT+AGG - tig0041894:1561-1580 None:intergenic 20.0%
!! AAAGAAAACTATTGAGTATA+CGG - tig0041894:1693-1712 None:intergenic 20.0%
!!! ATGTTTTTATTGTGAATTTG+TGG + tig0041894:1943-1962 Msa1462050:intron 20.0%
!! TCAATTGTATTAGAAAATCA+TGG - tig0041894:2312-2331 None:intergenic 20.0%
!! AATTGAATAGATGTACAATT+AGG + tig0041894:2326-2345 Msa1462050:intron 20.0%
!!! TTGAATTTACATTTTTGCAT+TGG + tig0041894:2567-2586 Msa1462050:intron 20.0%
!!! TGAATTTACATTTTTGCATT+GGG + tig0041894:2568-2587 Msa1462050:intron 20.0%
!! TCATCTATAAATATAATGCA+TGG - tig0041894:2694-2713 None:intergenic 20.0%
!! AATTAAGACAAACCTTAATT+CGG - tig0041894:2991-3010 None:intergenic 20.0%
!!! GCATGGTATATTTTTTATTT+AGG + tig0041894:3020-3039 Msa1462050:intron 20.0%
!!! TTATTGGTTTTCATTTAGTA+CGG + tig0041894:3233-3252 Msa1462050:intron 20.0%
!!! ATTTGATTATTGTTTTCATG+TGG + tig0041894:3483-3502 Msa1462050:intron 20.0%
!! TAAATTAGTTGTTCAAAATC+TGG - tig0041894:3671-3690 None:intergenic 20.0%
!!! TTATTGGTAATTTACTTCAT+AGG - tig0041894:3753-3772 None:intergenic 20.0%
!! CAACCAAAATTAATTGTTAT+TGG - tig0041894:3769-3788 None:intergenic 20.0%
!!! CAATAACAATTAATTTTGGT+TGG + tig0041894:3767-3786 Msa1462050:intron 20.0%
!! AGTAAAATTCTCTTCAATTA+AGG - tig0041894:3854-3873 None:intergenic 20.0%
!!! AAAAAAATTTGAGACTTTAC+AGG + tig0041894:4483-4502 Msa1462050:three_prime_UTR 20.0%
!! TCTAATCACATGATTTATTA+AGG + tig0041894:4567-4586 Msa1462050:intron 20.0%
!! GAAATCCAAAAATAAGTTAA+TGG - tig0041894:4611-4630 None:intergenic 20.0%
!!! CTTATTTTTGGATTTCATTT+TGG + tig0041894:4615-4634 Msa1462050:intron 20.0%
!!! TCTTTTAAAGAGAATATCAA+AGG - tig0041894:4792-4811 None:intergenic 20.0%
!! AGAATAATATTTAGGAAGAA+GGG - tig0041894:5027-5046 None:intergenic 20.0%
!! AAGAATAATATTTAGGAAGA+AGG - tig0041894:5028-5047 None:intergenic 20.0%
!! AAAGACGAAGAATAATATTT+AGG - tig0041894:5035-5054 None:intergenic 20.0%
!! AATCAAAAGGTAGTATTATT+TGG + tig0041894:5097-5116 Msa1462050:intron 20.0%
!! ATCAAAAGGTAGTATTATTT+GGG + tig0041894:5098-5117 Msa1462050:intron 20.0%
!! TAAAAAGTTGTATATGGTTA+GGG + tig0041894:5238-5257 Msa1462050:intron 20.0%
!!! TTCATTAATTTTCTTCATTC+TGG - tig0041894:5552-5571 None:intergenic 20.0%
!! TCTTCATATTCATACAAAAT+TGG - tig0041894:5696-5715 None:intergenic 20.0%
!! GTTCAACTTAAATTATTAAC+CGG + tig0041894:6100-6119 Msa1462050:intron 20.0%
!! ACTATAAAATTTCAGTAGTA+TGG - tig0041894:6436-6455 None:intergenic 20.0%
!!! CTTTTTTGTGGATAAATAAA+GGG - tig0041894:6980-6999 Msa1462060:intron 20.0%
!!! TCTTTTTTGTGGATAAATAA+AGG - tig0041894:6981-7000 Msa1462060:intron 20.0%
!! TAGAAAGAAACATTATAGAA+AGG + tig0041894:7422-7441 Msa1462050:intron 20.0%
!! CTTAATCTAATACTTGATTA+TGG - tig0041894:7647-7666 Msa1462060:intron 20.0%
!! TTAAGAGATAATCATGTTTA+AGG + tig0041894:7662-7681 Msa1462050:intron 20.0%
!! TAAGAGATAATCATGTTTAA+GGG + tig0041894:7663-7682 Msa1462050:intron 20.0%
!!! ATAAAAACAGAGAAGTTTTA+AGG - tig0041894:7821-7840 Msa1462060:intron 20.0%
!!! TTAAAACTTCTCTGTTTTTA+TGG + tig0041894:7820-7839 Msa1462050:intron 20.0%
!!! TAAAACTTCTCTGTTTTTAT+GGG + tig0041894:7821-7840 Msa1462050:intron 20.0%
!! ATCTTCATTAGATTTAGATA+AGG - tig0041894:8448-8467 None:intergenic 20.0%
!! TTGTCAATAAGATAATAGAA+AGG + tig0041894:8582-8601 Msa1462050:intron 20.0%
!! TGTCAATAAGATAATAGAAA+GGG + tig0041894:8583-8602 Msa1462050:intron 20.0%
!! TACCCAAAAAAAAAAATCAT+TGG + tig0041894:8695-8714 Msa1462050:intron 20.0%
!!! TGCCAATGATTTTTTTTTTT+GGG - tig0041894:8700-8719 None:intergenic 20.0%
!!! ATGCCAATGATTTTTTTTTT+TGG - tig0041894:8701-8720 None:intergenic 20.0%
!!! TTAGTGTGTTTTTTTTTTTG+AGG + tig0041894:8973-8992 Msa1462050:intron 20.0%
!!! TAGTGTGTTTTTTTTTTTGA+GGG + tig0041894:8974-8993 Msa1462050:intron 20.0%
!!! TTTTTAAGAGAGAAAAATAG+GGG + tig0041894:9041-9060 Msa1462050:intron 20.0%
!!! ATAGAAAAATTTGTTTTGGT+TGG + tig0041894:9603-9622 Msa1462050:intron 20.0%
!!! TAGAAAAATTTGTTTTGGTT+GGG + tig0041894:9604-9623 Msa1462050:intron 20.0%
!!! ATGTGAAAATTTGTTTTGAT+CGG + tig0041894:9671-9690 Msa1462050:intron 20.0%
!! TGAATTTAGTGAATGAAATT+TGG - tig0041894:10681-10700 None:intergenic 20.0%
!!! GATTTTTTTGAACTGAAAAA+TGG - tig0041894:11008-11027 None:intergenic 20.0%
!!! GACATTTACTTACTTAATTT+TGG + tig0041894:11068-11087 Msa1462050:intron 20.0%
!!! CATTTACTTACTTAATTTTG+GGG + tig0041894:11070-11089 Msa1462050:intron 20.0%
! TAATAAAATACTTGTGGGAA+AGG + tig0041894:401-420 Msa1462050:five_prime_UTR 25.0%
! AAGAATAGAGAGAAGAAAAA+AGG - tig0041894:726-745 None:intergenic 25.0%
! CAAATAATTCAACCAAAATC+AGG - tig0041894:802-821 None:intergenic 25.0%
! TATATCTATTTGCTCACATA+TGG + tig0041894:1085-1104 Msa1462050:intron 25.0%
! ACATATGGTTATAAACACTA+TGG + tig0041894:1100-1119 Msa1462050:intron 25.0%
!! ATACCACAATCGAATAATTT+TGG + tig0041894:1126-1145 Msa1462050:intron 25.0%
! CAATATTGTTCTTATTGTAG+TGG + tig0041894:1203-1222 Msa1462050:intron 25.0%
! AGAAAAATCAGTGTTACAAT+AGG - tig0041894:1236-1255 None:intergenic 25.0%
!!! TTGCTGATAATGGATTTTAA+TGG + tig0041894:1349-1368 Msa1462050:intron 25.0%
!!! ATGGATTTTAATGGTTTTTC+TGG + tig0041894:1358-1377 Msa1462050:intron 25.0%
!!! TGGATTTTAATGGTTTTTCT+GGG + tig0041894:1359-1378 Msa1462050:intron 25.0%
! GCTATGCATAATTTAGATAT+TGG + tig0041894:1381-1400 Msa1462050:intron 25.0%
! CAAAGATAGTTACTTAATCT+TGG + tig0041894:1793-1812 Msa1462050:CDS 25.0%
! TAAGAAAAAACAGATTCAGA+TGG - tig0041894:2221-2240 None:intergenic 25.0%
! TTGACACAAACAATGAAAAA+TGG - tig0041894:2282-2301 None:intergenic 25.0%
! ATTGTATTAGAAAATCATGG+AGG - tig0041894:2309-2328 None:intergenic 25.0%
! GGGATATTAAAACATAAGAA+TGG - tig0041894:2502-2521 None:intergenic 25.0%
!! TCTTAATTTTCTTATCTGCA+TGG + tig0041894:3003-3022 Msa1462050:intron 25.0%
!! GTTCTTAAATGCTGTATTTT+AGG + tig0041894:3102-3121 Msa1462050:intron 25.0%
! TTGAAGGTCAACAAAATTAT+GGG - tig0041894:3131-3150 None:intergenic 25.0%
! ATTGAAGGTCAACAAAATTA+TGG - tig0041894:3132-3151 None:intergenic 25.0%
!!! TAAAAAAGTTGGTAGATTGA+AGG - tig0041894:3147-3166 None:intergenic 25.0%
! TTGACAAGTGTAAATGAAAA+TGG - tig0041894:3280-3299 None:intergenic 25.0%
! GTTCTTCAAAATTTACATCT+GGG - tig0041894:3544-3563 None:intergenic 25.0%
! AGTTCTTCAAAATTTACATC+TGG - tig0041894:3545-3564 None:intergenic 25.0%
!!! TAAATTTTGAAGAACTAGCT+CGG + tig0041894:3549-3568 Msa1462050:CDS 25.0%
! ATATCTTGTAAGATGATTCA+GGG - tig0041894:3698-3717 None:intergenic 25.0%
! TATATCTTGTAAGATGATTC+AGG - tig0041894:3699-3718 None:intergenic 25.0%
!!! AAAACAAAACTAGCTTGTTA+GGG - tig0041894:3815-3834 None:intergenic 25.0%
! AGCTTAATAGTTATACGTTT+AGG + tig0041894:4100-4119 Msa1462050:intron 25.0%
! CAAAAATGGCAAAATCATTA+TGG - tig0041894:4247-4266 None:intergenic 25.0%
!!! GCACTGATTTAAAACAAAAA+TGG - tig0041894:4261-4280 None:intergenic 25.0%
! TGAAACAAAAAGAGATAGAA+AGG - tig0041894:4346-4365 None:intergenic 25.0%
!!! TCTCTTTTTGTTTCAAATGT+AGG + tig0041894:4351-4370 Msa1462050:intron 25.0%
!!! TTGGTCCATTAACTTATTTT+TGG + tig0041894:4603-4622 Msa1462050:intron 25.0%
! ATTGAGACACTTTATAGTTA+GGG - tig0041894:4643-4662 None:intergenic 25.0%
! AATTGAGACACTTTATAGTT+AGG - tig0041894:4644-4663 None:intergenic 25.0%
!! AACTATAAAGTGTCTCAATT+TGG + tig0041894:4644-4663 Msa1462050:intron 25.0%
! AAAAAATTTAGTGAGGCATA+TGG - tig0041894:4763-4782 None:intergenic 25.0%
!!! GAAGATGAATGGATTTTATT+AGG - tig0041894:4866-4885 None:intergenic 25.0%
! AGTAAAAACACATGAATTTG+AGG + tig0041894:5169-5188 Msa1462050:intron 25.0%
! GTAAAAAGTTGTATATGGTT+AGG + tig0041894:5237-5256 Msa1462050:intron 25.0%
!! AGGGTTTTCAAAAATCAATT+TGG + tig0041894:5257-5276 Msa1462050:intron 25.0%
!! GGGTTTTCAAAAATCAATTT+GGG + tig0041894:5258-5277 Msa1462050:intron 25.0%
!! GGTTTTCAAAAATCAATTTG+GGG + tig0041894:5259-5278 Msa1462050:intron 25.0%
!!! CTTTGTTTTGAAAAACTGAA+TGG + tig0041894:5391-5410 Msa1462050:intron 25.0%
!!! TTTTGAAAAACTGAATGGAT+GGG + tig0041894:5396-5415 Msa1462050:intron 25.0%
!!! AATATTTGGTACTGGTTTTA+TGG + tig0041894:5441-5460 Msa1462050:intron 25.0%
! ACTAATTCAAATATAACACG+TGG - tig0041894:5856-5875 None:intergenic 25.0%
!!! TATTGTTTTAGCACAAGAAT+GGG + tig0041894:6070-6089 Msa1462050:intron 25.0%
! TAAATTATTAACCGGATATG+AGG + tig0041894:6108-6127 Msa1462050:intron 25.0%
!! GAGTTTCGTATTTTCTAATT+AGG - tig0041894:6521-6540 Msa1462060:three_prime_UTR 25.0%
!! TATGTTACTCTAGTGATTTT+GGG - tig0041894:6576-6595 Msa1462060:three_prime_UTR 25.0%
!! TTATGTTACTCTAGTGATTT+TGG - tig0041894:6577-6596 Msa1462060:three_prime_UTR 25.0%
!!! ATTAAGTTCTCTCTTTTTTG+TGG - tig0041894:6992-7011 Msa1462060:intron 25.0%
! GATGAAATACATACAATTGT+AGG + tig0041894:7040-7059 Msa1462050:intron 25.0%
! ATTACACAACAATCAACTTT+AGG + tig0041894:7355-7374 Msa1462050:intron 25.0%
! TTGTGACAGGATTAAATTTA+TGG - tig0041894:7722-7741 Msa1462060:intron 25.0%
! GAAATTCATTCACTAAATAC+AGG + tig0041894:7976-7995 Msa1462050:intron 25.0%
!! TCGTTTGTATTTCTTTTCAT+AGG - tig0041894:8037-8056 Msa1462060:intron 25.0%
! AAAAATCTCAAAGATGATGA+TGG + tig0041894:8068-8087 Msa1462050:intron 25.0%
! GATTTAGATAAGGAGATTAT+AGG - tig0041894:8438-8457 None:intergenic 25.0%
!! CGGTTCAAATATAATTTTTG+TGG - tig0041894:8515-8534 None:intergenic 25.0%
! ACAATTCCTTACTGAAAAAA+CGG - tig0041894:8535-8554 None:intergenic 25.0%
! TCAAAATAGAAATAAGATGC+TGG + tig0041894:8639-8658 Msa1462050:intron 25.0%
! AACAACACAGAGAATAAATT+TGG + tig0041894:8804-8823 Msa1462050:intron 25.0%
!!! TGCTAAAAATTTTAAGGAAC+CGG - tig0041894:8849-8868 None:intergenic 25.0%
!! GTTGGATGCTAAAAATTTTA+AGG - tig0041894:8855-8874 None:intergenic 25.0%
! ACGTGTCAAAAAATTAAGAA+GGG + tig0041894:8898-8917 Msa1462050:intron 25.0%
!!! TTTTAAGAGAGAAAAATAGG+GGG + tig0041894:9042-9061 Msa1462050:intron 25.0%
!! TTTGATGAAGTGTTAATAAG+AGG + tig0041894:9097-9116 Msa1462050:intron 25.0%
! TTTGTAACAGAGAAAAATAG+AGG + tig0041894:9240-9259 Msa1462050:intron 25.0%
! CAAAAAATAATACTTCAAGG+AGG - tig0041894:9472-9491 None:intergenic 25.0%
! TAAAATATGTTGAGATGAGA+TGG + tig0041894:9513-9532 Msa1462050:intron 25.0%
!! AGATTAAGTTAGTGTGTTTT+AGG + tig0041894:9755-9774 Msa1462050:intron 25.0%
!!! TGTTTTAGGAGAGAAAAATA+GGG + tig0041894:9769-9788 Msa1462050:intron 25.0%
! AATACAATCTTACCATTTCT+TGG - tig0041894:9847-9866 None:intergenic 25.0%
! ATCCAAATTATTCCTATTCA+AGG + tig0041894:9960-9979 Msa1462050:intron 25.0%
! ATCCTTGAATAGGAATAATT+TGG - tig0041894:9965-9984 None:intergenic 25.0%
!! ATACATAGAATAAGTGGATT+TGG - tig0041894:10026-10045 None:intergenic 25.0%
!!! GAGGGTTTTTTTATTTTGAA+AGG - tig0041894:10071-10090 None:intergenic 25.0%
! CCTTTGAACAAAATATCAAT+CGG - tig0041894:10097-10116 None:intergenic 25.0%
!! ATTGTGCTCATTTTATTGAT+CGG - tig0041894:10160-10179 None:intergenic 25.0%
! TACAATCTTCTTAATGATGT+AGG - tig0041894:10413-10432 None:intergenic 25.0%
!!! ATATTGATATGCAGTTTTGT+CGG + tig0041894:10526-10545 Msa1462050:intron 25.0%
!!! ATTTCATCTCTATTTTGAAG+CGG - tig0041894:10766-10785 None:intergenic 25.0%
! TTTGATTACTACACAAGAAT+TGG - tig0041894:10795-10814 None:intergenic 25.0%
! GTCAATCAACAACTATATAA+AGG - tig0041894:10818-10837 None:intergenic 25.0%
! TGAAACAAAATGAGATAGAA+AGG - tig0041894:10922-10941 None:intergenic 25.0%
! AATTGATTACATTACGATCT+TGG - tig0041894:11148-11167 None:intergenic 25.0%
TTTAGCACAATAGCAGATTT+GGG - tig0041894:512-531 None:intergenic 30.0%
ATTTAGCACAATAGCAGATT+TGG - tig0041894:513-532 None:intergenic 30.0%
CTAATAACGTCAATCGAAAT+AGG - tig0041894:540-559 None:intergenic 30.0%
AAACAATTACCCTATCTTGT+TGG + tig0041894:917-936 Msa1462050:CDS 30.0%
ACAATGTTACCAACAAGATA+GGG - tig0041894:929-948 None:intergenic 30.0%
AACAATGTTACCAACAAGAT+AGG - tig0041894:930-949 None:intergenic 30.0%
!! TAGTGTTGTATGCTGATTTA+GGG + tig0041894:1021-1040 Msa1462050:intron 30.0%
!!! ATGCTGATTTAGGGTTTTAT+TGG + tig0041894:1030-1049 Msa1462050:intron 30.0%
!!! TGCTGATTTAGGGTTTTATT+GGG + tig0041894:1031-1050 Msa1462050:intron 30.0%
TTGCCAAAATTATTCGATTG+TGG - tig0041894:1132-1151 None:intergenic 30.0%
TTGTGAGTCAAGATCAATAT+TGG - tig0041894:1443-1462 None:intergenic 30.0%
ATATTGATCTTGACTCACAA+AGG + tig0041894:1443-1462 Msa1462050:CDS 30.0%
!!! TTTTTTCCCCTTCTGTTTTT+AGG + tig0041894:1598-1617 Msa1462050:intron 30.0%
!!! TTTTTCCCCTTCTGTTTTTA+GGG + tig0041894:1599-1618 Msa1462050:intron 30.0%
!! TGAGTATGATTCTAGAGTTA+AGG + tig0041894:1829-1848 Msa1462050:CDS 30.0%
!! GAAGCAGGTAATCTTTATTT+TGG + tig0041894:1907-1926 Msa1462050:intron 30.0%
ACTGAAGATAACAGAAAATC+AGG - tig0041894:2352-2371 None:intergenic 30.0%
AAATCTTTGTACAATCAGCA+GGG - tig0041894:2420-2439 None:intergenic 30.0%
AAAATCTTTGTACAATCAGC+AGG - tig0041894:2421-2440 None:intergenic 30.0%
!! ATTTTCAACACAAACTTGCT+TGG + tig0041894:2466-2485 Msa1462050:intron 30.0%
ATGAAGGAAGGAAAAATAGA+GGG - tig0041894:2527-2546 None:intergenic 30.0%
AATGAAGGAAGGAAAAATAG+AGG - tig0041894:2528-2547 None:intergenic 30.0%
TCAATTTATACAGACAACGA+AGG - tig0041894:2551-2570 None:intergenic 30.0%
AACTATGTACAGATGTTCAT+AGG + tig0041894:2616-2635 Msa1462050:intron 30.0%
ATAGATGAAATCGATGCAAT+TGG + tig0041894:2706-2725 Msa1462050:CDS 30.0%
TACGTATCATAGATGAATAC+TGG + tig0041894:3052-3071 Msa1462050:intron 30.0%
! GAAGGTAGTCTTAAAAAAGT+TGG - tig0041894:3158-3177 None:intergenic 30.0%
! CTTCAATCTAAAACCTTGAA+GGG + tig0041894:3174-3193 Msa1462050:intron 30.0%
ATATAATTAATCGCCCTTCA+AGG - tig0041894:3190-3209 None:intergenic 30.0%
GAAGTTGGAACCAAATTTAT+TGG + tig0041894:3217-3236 Msa1462050:intron 30.0%
CAAGTGTAAATGAAAATGGA+GGG - tig0041894:3276-3295 None:intergenic 30.0%
ACAAGTGTAAATGAAAATGG+AGG - tig0041894:3277-3296 None:intergenic 30.0%
!! AAACAAAACTAGCTTGTTAG+GGG - tig0041894:3814-3833 None:intergenic 30.0%
!! GAAAACAAAACTAGCTTGTT+AGG - tig0041894:3816-3835 None:intergenic 30.0%
TCATTATGGCAACTATAGAA+AGG - tig0041894:4233-4252 None:intergenic 30.0%
TAGCTTAAGCATAATAGTTC+AGG - tig0041894:4435-4454 None:intergenic 30.0%
TTAAGGCTTAATACATGCTT+TGG + tig0041894:4584-4603 Msa1462050:intron 30.0%
TTGAGACACTTTATAGTTAG+GGG - tig0041894:4642-4661 None:intergenic 30.0%
! TTTTTAACATCAGATGCCTA+AGG + tig0041894:4713-4732 Msa1462050:intron 30.0%
CTTTAAATATGGTTCACCTT+AGG - tig0041894:4732-4751 None:intergenic 30.0%
CTAAGGTGAACCATATTTAA+AGG + tig0041894:4730-4749 Msa1462050:intron 30.0%
ATAGACCCTACATGATTTAA+CGG - tig0041894:4818-4837 None:intergenic 30.0%
! TGGATTTTATTAGGTGTTAG+TGG - tig0041894:4857-4876 None:intergenic 30.0%
CATAAAAATAAGGTGATCGA+TGG + tig0041894:5135-5154 Msa1462050:intron 30.0%
! AAAACACATGAATTTGAGGT+AGG + tig0041894:5173-5192 Msa1462050:intron 30.0%
! AAACACATGAATTTGAGGTA+GGG + tig0041894:5174-5193 Msa1462050:intron 30.0%
TCGTCGTAAAAAGTTGTATA+TGG + tig0041894:5232-5251 Msa1462050:intron 30.0%
!!! GTTTTGAAAAACTGAATGGA+TGG + tig0041894:5395-5414 Msa1462050:intron 30.0%
TCGTGAACAGAGAAAATATT+TGG + tig0041894:5427-5446 Msa1462050:intron 30.0%
ACAGAGAAAATATTTGGTAC+TGG + tig0041894:5433-5452 Msa1462050:intron 30.0%
! AAGTGCTTTGAATTGAAAAC+AGG + tig0041894:5649-5668 Msa1462050:intron 30.0%
! AGTGCTTTGAATTGAAAACA+GGG + tig0041894:5650-5669 Msa1462050:intron 30.0%
GTATGAATATGAAGAAGTGA+TGG + tig0041894:5701-5720 Msa1462050:intron 30.0%
!!! TGAAGACAGGGAAATTTTTT+TGG + tig0041894:5735-5754 Msa1462050:intron 30.0%
TGTCTGGATCATGAATAATT+TGG + tig0041894:5933-5952 Msa1462050:intron 30.0%
!!! GTATTGTTTTAGCACAAGAA+TGG + tig0041894:6069-6088 Msa1462050:intron 30.0%
TGAAGTTAGAAGTTACTAGT+AGG - tig0041894:6289-6308 None:intergenic 30.0%
!!! ATCAATGTTGCAGTTTTGTT+GGG - tig0041894:6743-6762 Msa1462060:intron 30.0%
!! AATCAATGTTGCAGTTTTGT+TGG - tig0041894:6744-6763 Msa1462060:intron 30.0%
AATTGCTTCTTATCAAAAGC+TGG + tig0041894:7183-7202 Msa1462050:intron 30.0%
TTGATATTGTTGACACTTTC+AGG - tig0041894:7221-7240 Msa1462060:CDS 30.0%
AACAATATCAACCACTTTGA+CGG + tig0041894:7230-7249 Msa1462050:intron 30.0%
GTAATGTGATTATTTGCAGT+GGG - tig0041894:7340-7359 Msa1462060:intron 30.0%
TGTAATGTGATTATTTGCAG+TGG - tig0041894:7341-7360 Msa1462060:intron 30.0%
AATTGAGAATGGAATGTTGT+GGG - tig0041894:7477-7496 Msa1462060:CDS 30.0%
AAATTGAGAATGGAATGTTG+TGG - tig0041894:7478-7497 Msa1462060:CDS 30.0%
!!! TTATTGTTTTTGGTTGCTGA+TGG - tig0041894:7582-7601 Msa1462060:intron 30.0%
! TTATGTTGTTTGTGTTCTGT+TGG - tig0041894:7777-7796 Msa1462060:intron 30.0%
AAGAAGAGAGAACTAAAAGA+AGG + tig0041894:8156-8175 Msa1462050:intron 30.0%
AGTGAGATTGAATAGAATAG+AGG + tig0041894:8199-8218 Msa1462050:intron 30.0%
ATAATGAAGAGTTCAAGTGA+TGG + tig0041894:8243-8262 Msa1462050:intron 30.0%
!!! TTTGAACCGTTTTTTCAGTA+AGG + tig0041894:8526-8545 Msa1462050:intron 30.0%
! GAATTGTCAAGAAAGTATGA+TGG + tig0041894:8548-8567 Msa1462050:intron 30.0%
!!! TTTTTGGGTATGTATGAGTT+AGG - tig0041894:8685-8704 None:intergenic 30.0%
AACACAGAGAATAAATTTGG+AGG + tig0041894:8807-8826 Msa1462050:intron 30.0%
GACGTGTCAAAAAATTAAGA+AGG + tig0041894:8897-8916 Msa1462050:intron 30.0%
CGTGTCAAAAAATTAAGAAG+GGG + tig0041894:8899-8918 Msa1462050:intron 30.0%
AAGAGGTAAGATTGTATTTG+TGG + tig0041894:9114-9133 Msa1462050:intron 30.0%
!!! GTGTTTTAGGAGAGAAAAAT+AGG + tig0041894:9768-9787 Msa1462050:intron 30.0%
!!! GTTTTAGGAGAGAAAAATAG+GGG + tig0041894:9770-9789 Msa1462050:intron 30.0%
!! TTTTAGGAGAGAAAAATAGG+GGG + tig0041894:9771-9790 Msa1462050:intron 30.0%
! TAAGTGGATTTGGAAGAATT+TGG - tig0041894:10016-10035 None:intergenic 30.0%
TGAACAAAATATCAATCGGA+TGG - tig0041894:10093-10112 None:intergenic 30.0%
! CCGATTGATATTTTGTTCAA+AGG + tig0041894:10094-10113 Msa1462050:intron 30.0%
!! TTAATGATGTAGGTTGGTAA+CGG - tig0041894:10403-10422 None:intergenic 30.0%
ATCTTCTTAATGATGTAGGT+TGG - tig0041894:10409-10428 None:intergenic 30.0%
ACAAGAAGCAAATCATATGA+TGG - tig0041894:10876-10895 None:intergenic 30.0%
GTCTAAGAGAAAGTCTAATT+TGG + tig0041894:11040-11059 Msa1462050:intron 30.0%
AATTCAGCAGTAGCTGATTA+GGG - tig0041894:479-498 None:intergenic 35.0%
CAATAGCAGATTTGGGAATT+AGG - tig0041894:505-524 None:intergenic 35.0%
AGAAGAAAAAAGGAACCTTG+AGG - tig0041894:716-735 None:intergenic 35.0%
! TTTTGTTGCGTTCCTGATTT+TGG + tig0041894:787-806 Msa1462050:intron 35.0%
!! TCTTGTTGGTAACATTGTTG+AGG + tig0041894:931-950 Msa1462050:CDS 35.0%
!! CTAGTGTTGTATGCTGATTT+AGG + tig0041894:1020-1039 Msa1462050:intron 35.0%
!! TCTTCTGGATTTGCTGATAA+TGG + tig0041894:1339-1358 Msa1462050:intron 35.0%
!!! TTTTCCCCTTCTGTTTTTAG+GGG + tig0041894:1600-1619 Msa1462050:intron 35.0%
ACAATCTTTCTTCCAGTTGT+TGG + tig0041894:1722-1741 Msa1462050:CDS 35.0%
!! ACTCTAGAATCATACTCAGA+AGG - tig0041894:1827-1846 None:intergenic 35.0%
TTGTCAACAGATCCAAGAAT+TGG + tig0041894:2010-2029 Msa1462050:intron 35.0%
AATCTTTGTACAATCAGCAG+GGG - tig0041894:2419-2438 None:intergenic 35.0%
GAACATCTGTACATAGTTTC+AGG - tig0041894:2614-2633 None:intergenic 35.0%
!! TTGGTACAAAGCGTTTTGAT+AGG + tig0041894:2725-2744 Msa1462050:CDS 35.0%
!! GGTATGAAATTTTAGCATGC+AGG + tig0041894:2746-2765 Msa1462050:intron 35.0%
!! TCATAGATGAATACTGGCTT+TGG + tig0041894:3058-3077 Msa1462050:intron 35.0%
!! CATAGATGAATACTGGCTTT+GGG + tig0041894:3059-3078 Msa1462050:intron 35.0%
AAGGTCAACAAAATTATGGG+AGG - tig0041894:3128-3147 None:intergenic 35.0%
!!! CCTTCAAGGTTTTAGATTGA+AGG - tig0041894:3176-3195 None:intergenic 35.0%
! CCTTCAATCTAAAACCTTGA+AGG + tig0041894:3173-3192 Msa1462050:intron 35.0%
CATTTACACTTGTCAATTGC+AGG + tig0041894:3284-3303 Msa1462050:intron 35.0%
AACAAAGCAGATGAAGTATG+AGG - tig0041894:3438-3457 None:intergenic 35.0%
GGATATTTCAGATCCATTCA+AGG + tig0041894:3504-3523 Msa1462050:intron 35.0%
GAACATTCATCTTCCTTGAA+TGG - tig0041894:3520-3539 None:intergenic 35.0%
!! TTTTGGTTGGACATTTGTCT+TGG + tig0041894:3780-3799 Msa1462050:intron 35.0%
TAATCGCTTGAACTACCAAT+GGG - tig0041894:4073-4092 None:intergenic 35.0%
TTAATCGCTTGAACTACCAA+TGG - tig0041894:4074-4093 None:intergenic 35.0%
TCTTATATGACCTGTTGATG+TGG + tig0041894:4314-4333 Msa1462050:intron 35.0%
CTTATATGACCTGTTGATGT+GGG + tig0041894:4315-4334 Msa1462050:intron 35.0%
GGATAAGAGAAAGTCTAACT+TGG + tig0041894:4504-4523 Msa1462050:three_prime_UTR 35.0%
AGGTGAACCATATTTAAAGG+TGG + tig0041894:4733-4752 Msa1462050:intron 35.0%
AAATTTAGTGAGGCATATGG+TGG - tig0041894:4760-4779 None:intergenic 35.0%
AGATGACCGTTAAATCATGT+AGG + tig0041894:4809-4828 Msa1462050:intron 35.0%
GATGACCGTTAAATCATGTA+GGG + tig0041894:4810-4829 Msa1462050:intron 35.0%
TGAGGAAAGAAGAAGATGAA+TGG - tig0041894:4877-4896 None:intergenic 35.0%
TTGAAGATCATGAAGAGATG+AGG - tig0041894:4895-4914 None:intergenic 35.0%
TTGTGTGGTGATATAAGAGT+AGG - tig0041894:4970-4989 None:intergenic 35.0%
ATAGCTGAAGATGACAATGA+TGG - tig0041894:4993-5012 None:intergenic 35.0%
AAAAATAAGGTGATCGATGG+AGG + tig0041894:5138-5157 Msa1462050:intron 35.0%
AAAATAAGGTGATCGATGGA+GGG + tig0041894:5139-5158 Msa1462050:intron 35.0%
! ACTTTTTACGACGATGTTGA+AGG - tig0041894:5226-5245 None:intergenic 35.0%
AATCAATTTGGGGACAACAA+TGG + tig0041894:5269-5288 Msa1462050:intron 35.0%
CAAAACAAAGAAATTCTCGC+CGG - tig0041894:5381-5400 None:intergenic 35.0%
! GTGCTTTGAATTGAAAACAG+GGG + tig0041894:5651-5670 Msa1462050:intron 35.0%
! GAATATGAAGAAGTGATGGA+AGG + tig0041894:5705-5724 Msa1462050:intron 35.0%
!!! CAGGGAAATTTTTTTGGTGT+TGG + tig0041894:5741-5760 Msa1462050:intron 35.0%
!!! GGAAATTTTTTTGGTGTTGG+TGG + tig0041894:5744-5763 Msa1462050:intron 35.0%
ACAATAGACATGCAATCGAA+TGG + tig0041894:5780-5799 Msa1462050:intron 35.0%
GCTAAAACAATACCAGTTCA+TGG - tig0041894:6062-6081 None:intergenic 35.0%
TTGACCATTTGGGAAGTTTA+TGG - tig0041894:6203-6222 None:intergenic 35.0%
! AAAGGCACATTTGACCATTT+GGG - tig0041894:6213-6232 None:intergenic 35.0%
! TAGTAGGTAGTTGGAGTTTT+TGG - tig0041894:6273-6292 None:intergenic 35.0%
AGAAGTTACTAGTAGGTAGT+TGG - tig0041894:6282-6301 None:intergenic 35.0%
!!! CTCTAGTGATTTTGGGATTT+TGG - tig0041894:6569-6588 Msa1462060:intron 35.0%
GCACGTTTAGTTATCATGTT+AGG - tig0041894:6612-6631 Msa1462060:three_prime_UTR 35.0%
! ACTTTTCTCTACTTTGCCTA+TGG - tig0041894:6657-6676 Msa1462060:CDS 35.0%
TAGGCAAAGTAGAGAAAAGT+TGG + tig0041894:6657-6676 Msa1462050:intron 35.0%
!!! TCAATGTTGCAGTTTTGTTG+GGG - tig0041894:6742-6761 Msa1462060:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - tig0041894:6957-6976 Msa1462060:intron 35.0%
AATTGTAGGTCCTTGAGTTT+AGG + tig0041894:7054-7073 Msa1462050:intron 35.0%
ATTGTAGGTCCTTGAGTTTA+GGG + tig0041894:7055-7074 Msa1462050:intron 35.0%
!! TTGAACAACTCTTGCTTTTC+TGG + tig0041894:7111-7130 Msa1462050:intron 35.0%
CTTTGCTGACGAATTTCTTT+AGG - tig0041894:7536-7555 Msa1462060:intron 35.0%
ATTTACCTGTAAGAAGATCC+TGG + tig0041894:8091-8110 Msa1462050:intron 35.0%
GAGATTGAATAGAATAGAGG+TGG + tig0041894:8202-8221 Msa1462050:intron 35.0%
! TGTCAAGAAAGTATGATGGA+AGG + tig0041894:8552-8571 Msa1462050:intron 35.0%
! GTCAAGAAAGTATGATGGAA+GGG + tig0041894:8553-8572 Msa1462050:intron 35.0%
TGGAATTAGATGAGCATCAT+TGG + tig0041894:8659-8678 Msa1462050:intron 35.0%
GGCATGTTTCTCATATCAAA+CGG + tig0041894:8716-8735 Msa1462050:intron 35.0%
! AGGAGCTTTATCTAAAACAC+CGG + tig0041894:8827-8846 Msa1462050:intron 35.0%
CGTGTCAAAAAACCAAGAAA+TGG + tig0041894:9832-9851 Msa1462050:intron 35.0%
TCAACGTGTTATCCTTGAAT+AGG - tig0041894:9975-9994 None:intergenic 35.0%
CAAAATATCAATCGGATGGA+GGG - tig0041894:10089-10108 None:intergenic 35.0%
ACAAAATATCAATCGGATGG+AGG - tig0041894:10090-10109 None:intergenic 35.0%
!! TGAAGAAAGTATCAATCGGA+TGG - tig0041894:10136-10155 None:intergenic 35.0%
!! CGGTTGAAGAAAGTATCAAT+CGG - tig0041894:10140-10159 None:intergenic 35.0%
!!! ATGTGTTTTAGTCCGCTTTT+GGG - tig0041894:10308-10327 None:intergenic 35.0%
!!! AATGTGTTTTAGTCCGCTTT+TGG - tig0041894:10309-10328 None:intergenic 35.0%
!! TGCAGTTTTGTCGGAAATAT+TGG + tig0041894:10535-10554 Msa1462050:intron 35.0%
CAAAAGAATAGACGCAAAAG+AGG - tig0041894:10608-10627 None:intergenic 35.0%
GAATTCAGCAGTAGCTGATT+AGG - tig0041894:480-499 None:intergenic 40.0%
TGATCTTGACTCACAAAGGA+AGG + tig0041894:1447-1466 Msa1462050:CDS 40.0%
GATCTTGACTCACAAAGGAA+GGG + tig0041894:1448-1467 Msa1462050:CDS 40.0%
GCTAAAAACATCTACTCGAC+AGG + tig0041894:1483-1502 Msa1462050:CDS 40.0%
ACCATTCATAACGTTTCGAG+TGG + tig0041894:1514-1533 Msa1462050:intron 40.0%
TCCACTCGAAACGTTATGAA+TGG - tig0041894:1518-1537 None:intergenic 40.0%
TAAGGCCCCTAAAAACAGAA+GGG - tig0041894:1608-1627 None:intergenic 40.0%
CTAAAACCTGGTGATCTTGT+TGG + tig0041894:1764-1783 Msa1462050:CDS 40.0%
TTTACACCAACAAGATCACC+AGG - tig0041894:1773-1792 None:intergenic 40.0%
!! TGATTCTAGAGTTAAGGCCA+TGG + tig0041894:1835-1854 Msa1462050:CDS 40.0%
! TGGCTTTTCATCAACTTCCA+TGG - tig0041894:1855-1874 None:intergenic 40.0%
!! AGTTGATGAAAAGCCAACAG+AGG + tig0041894:1859-1878 Msa1462050:CDS 40.0%
ATGTCATTGTAGTCCTCTGT+TGG - tig0041894:1875-1894 None:intergenic 40.0%
ACAGAGGACTACAATGACAT+TGG + tig0041894:1875-1894 Msa1462050:CDS 40.0%
TTTGTGGCCAGTGATATAAC+TGG + tig0041894:1959-1978 Msa1462050:intron 40.0%
GATCCATCCAGTTATATCAC+TGG - tig0041894:1969-1988 None:intergenic 40.0%
! ATTAAAGTTTTCCCAGTCCC+TGG - tig0041894:2125-2144 None:intergenic 40.0%
AGGGACTGGGAAAACTTTAA+TGG + tig0041894:2124-2143 Msa1462050:CDS 40.0%
CAGAAAAGTGGCATTTGTCT+GGG - tig0041894:2165-2184 None:intergenic 40.0%
TCAGAAAAGTGGCATTTGTC+TGG - tig0041894:2166-2185 None:intergenic 40.0%
ATCTTTGTACAATCAGCAGG+GGG - tig0041894:2418-2437 None:intergenic 40.0%
GGAAGGAAAAATAGAGGGAT+GGG - tig0041894:2522-2541 None:intergenic 40.0%
AGGAAGGAAAAATAGAGGGA+TGG - tig0041894:2523-2542 None:intergenic 40.0%
TACAGACAACGAAGGAATGA+AGG - tig0041894:2543-2562 None:intergenic 40.0%
GTACAGATGTTCATAGGAGA+CGG + tig0041894:2622-2641 Msa1462050:intron 40.0%
! GTGACTTTTCTTTTGCGAGT+TGG - tig0041894:2672-2691 None:intergenic 40.0%
CTAATTGCAGTGAAGTGAGT+GGG + tig0041894:2900-2919 Msa1462050:intron 40.0%
TAATTGCAGTGAAGTGAGTG+GGG + tig0041894:2901-2920 Msa1462050:intron 40.0%
CTGATTGAGCAACTCTAACA+TGG - tig0041894:2945-2964 None:intergenic 40.0%
TAGCAGTGATGACCGAATTA+AGG + tig0041894:2976-2995 Msa1462050:CDS 40.0%
TAGCTCTTGCTTCTTCAGTT+GGG - tig0041894:3395-3414 None:intergenic 40.0%
TGCTCCATTGAAATCATCTG+TGG - tig0041894:3576-3595 None:intergenic 40.0%
TTTCAATGGAGCACAACTGA+AGG + tig0041894:3583-3602 Msa1462050:CDS 40.0%
AACAAACCTCAGTTGCATCA+CGG - tig0041894:3643-3662 None:intergenic 40.0%
ACACACACACACACACAAAA+TGG + tig0041894:4008-4027 Msa1462050:intron 40.0%
CTTCATCATAATCCGAGCAT+AGG + tig0041894:4038-4057 Msa1462050:intron 40.0%
AAGGAAATTCCCACATCAAC+AGG - tig0041894:4327-4346 None:intergenic 40.0%
AACCACGAGGACTTTAATGA+AGG + tig0041894:4376-4395 Msa1462050:CDS 40.0%
TACCTTCATTAAAGTCCTCG+TGG - tig0041894:4381-4400 None:intergenic 40.0%
!!! TCTGCTCACGTTACCTTTTT+TGG + tig0041894:4676-4695 Msa1462050:intron 40.0%
CCAACAGAGATGACCAAAAA+AGG - tig0041894:4692-4711 None:intergenic 40.0%
!!! CCTTTTTTGGTCATCTCTGT+TGG + tig0041894:4689-4708 Msa1462050:intron 40.0%
! TGGTGGACCACCTTTAAATA+TGG - tig0041894:4743-4762 None:intergenic 40.0%
AGATGACAATGATGGTTGTG+TGG - tig0041894:4985-5004 None:intergenic 40.0%
TAACGACAACAGATTCACTC+TGG + tig0041894:5308-5327 Msa1462050:intron 40.0%
GATTCACTCTGGTAACATCA+TGG + tig0041894:5319-5338 Msa1462050:intron 40.0%
! TTTTATGGCCAACAGAGATC+AGG + tig0041894:5456-5475 Msa1462050:intron 40.0%
GAAGGAAGAAGATGAAGACA+GGG + tig0041894:5723-5742 Msa1462050:intron 40.0%
TTGTGTTAGACCAGTTGAGT+TGG + tig0041894:5896-5915 Msa1462050:intron 40.0%
TGTGTTAGACCAGTTGAGTT+GGG + tig0041894:5897-5916 Msa1462050:intron 40.0%
TGTAACATTGCACCATGAAC+TGG + tig0041894:6047-6066 Msa1462050:intron 40.0%
TAGCACAAGAATGGGTAACT+TGG + tig0041894:6078-6097 Msa1462050:intron 40.0%
TACCAGTTAGACCTCATATC+CGG - tig0041894:6122-6141 None:intergenic 40.0%
AGCATCATCATTCACGATTG+AGG + tig0041894:6161-6180 Msa1462050:intron 40.0%
CGAACCATAAACTTCCCAAA+TGG + tig0041894:6196-6215 Msa1462050:intron 40.0%
! GAAAGGCACATTTGACCATT+TGG - tig0041894:6214-6233 None:intergenic 40.0%
TGATACCAAGACAGCTAGAA+AGG - tig0041894:6231-6250 None:intergenic 40.0%
CTTGATTTCCTTCAAGCCAT+AGG + tig0041894:6638-6657 Msa1462050:intron 40.0%
GTAGAGAAAAGTTGGATCAG+TGG + tig0041894:6665-6684 Msa1462050:intron 40.0%
GTGTTTGCTTACTACAAGGA+TGG - tig0041894:6693-6712 Msa1462060:CDS 40.0%
CCTTGTGTTTGCTTACTACA+AGG - tig0041894:6697-6716 Msa1462060:CDS 40.0%
CCTTGTAGTAAGCAAACACA+AGG + tig0041894:6694-6713 Msa1462050:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + tig0041894:6799-6818 Msa1462050:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + tig0041894:6800-6819 Msa1462050:intron 40.0%
TCTTCTTAACTTATGCCCCA+AGG + tig0041894:6938-6957 Msa1462050:intron 40.0%
CTTCTTAACTTATGCCCCAA+GGG + tig0041894:6939-6958 Msa1462050:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG - tig0041894:6956-6975 Msa1462060:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - tig0041894:6958-6977 Msa1462060:intron 40.0%
!! TATTTGCAGTGGGTTGTTCA+AGG - tig0041894:7330-7349 Msa1462060:intron 40.0%
TCCATTCTCAATTTCCTTGC+AGG + tig0041894:7484-7503 Msa1462050:intron 40.0%
CCATTCTCAATTTCCTTGCA+GGG + tig0041894:7485-7504 Msa1462050:intron 40.0%
CATTCTCAATTTCCTTGCAG+GGG + tig0041894:7486-7505 Msa1462050:intron 40.0%
TGTTGTGTTTGTGTTGTGAC+AGG - tig0041894:7735-7754 Msa1462060:intron 40.0%
GTATACCAGGATCTTCTTAC+AGG - tig0041894:8099-8118 Msa1462060:CDS 40.0%
AAGATCCTGGTATACAAGCA+TGG + tig0041894:8104-8123 Msa1462050:intron 40.0%
TGTAACCATGCTTGTATACC+AGG - tig0041894:8112-8131 Msa1462060:exon 40.0%
TGAAGAGTTCAAGTGATGGT+AGG + tig0041894:8247-8266 Msa1462050:intron 40.0%
AGATGAGATGGCAAATGATC+AGG + tig0041894:9525-9544 Msa1462050:intron 40.0%
!! GAAAGTATCAATCGGATGGA+GGG - tig0041894:10132-10151 None:intergenic 40.0%
!! AGAAAGTATCAATCGGATGG+AGG - tig0041894:10133-10152 None:intergenic 40.0%
!! AAGAGTGTTACTCCGCAAAT+GGG - tig0041894:10233-10252 None:intergenic 40.0%
!!! TGGTTTTTTAGTGACGGTGA+CGG - tig0041894:10257-10276 None:intergenic 40.0%
!!! TGTGTTTTAGTCCGCTTTTG+GGG - tig0041894:10307-10326 None:intergenic 40.0%
AAGACGAATGTGTTCTATGC+CGG + tig0041894:10337-10356 Msa1462050:intron 40.0%
!! CAAATTCCAGAGGCTTTGAA+AGG - tig0041894:10721-10740 None:intergenic 40.0%
!! CTTTCAAAGCCTCTGGAATT+TGG + tig0041894:10719-10738 Msa1462050:intron 40.0%
AAAACTCAGCCAAATTCCAG+AGG - tig0041894:10731-10750 None:intergenic 40.0%
TCTTGTACTACCTGTTGATG+TGG + tig0041894:10890-10909 Msa1462050:intron 40.0%
CTTGTACTACCTGTTGATGT+GGG + tig0041894:10891-10910 Msa1462050:intron 40.0%
TTGTACTACCTGTTGATGTG+GGG + tig0041894:10892-10911 Msa1462050:intron 40.0%
! GACTTGCTTTCTTCTTTGCT+TGG - tig0041894:10948-10967 None:intergenic 40.0%
CGGTGCTCATATTCGCTAAT+TGG - tig0041894:647-666 None:intergenic 45.0%
! AGAAGCTCTGACGATATCGT+CGG - tig0041894:667-686 None:intergenic 45.0%
GGAAATGAATCCAGAAGACG+AGG + tig0041894:1402-1421 Msa1462050:CDS 45.0%
AAGGCCCCTAAAAACAGAAG+GGG - tig0041894:1607-1626 None:intergenic 45.0%
CTAAGGCCCCTAAAAACAGA+AGG - tig0041894:1609-1628 None:intergenic 45.0%
!!! CACCAGGTTTTAGCTTGTCA+GGG - tig0041894:1757-1776 None:intergenic 45.0%
!!! TCACCAGGTTTTAGCTTGTC+AGG - tig0041894:1758-1777 None:intergenic 45.0%
GAGGACTACAATGACATTGG+TGG + tig0041894:1878-1897 Msa1462050:CDS 45.0%
!! CATTGGTGGATTAGAGAAGC+AGG + tig0041894:1892-1911 Msa1462050:CDS 45.0%
TGGCCAGTGATATAACTGGA+TGG + tig0041894:1963-1982 Msa1462050:intron 45.0%
CGATGGCTTCAACCAATTCT+TGG - tig0041894:2025-2044 None:intergenic 45.0%
!! AAAGAGCGCTTCCAGAAGTT+AGG + tig0041894:2062-2081 Msa1462050:CDS 45.0%
GAGGACGAATTCCTAACTTC+TGG - tig0041894:2076-2095 None:intergenic 45.0%
TTAGGAATTCGTCCTCCCAA+GGG + tig0041894:2080-2099 Msa1462050:CDS 45.0%
!! CCATATAAGAGCACTCCCTT+GGG - tig0041894:2098-2117 None:intergenic 45.0%
!! ACCATATAAGAGCACTCCCT+TGG - tig0041894:2099-2118 None:intergenic 45.0%
TGCTCTTATATGGTCCACCA+GGG + tig0041894:2105-2124 Msa1462050:CDS 45.0%
!!! GCCACTTTTCTGAAGTTAGC+AGG + tig0041894:2173-2192 Msa1462050:CDS 45.0%
GCCTGCTAACTTCAGAAAAG+TGG - tig0041894:2177-2196 None:intergenic 45.0%
CAGATTCAGATGGTCATACC+TGG - tig0041894:2211-2230 None:intergenic 45.0%
GACAACGAAGGAATGAAGGA+AGG - tig0041894:2539-2558 None:intergenic 45.0%
!! TTGCGAGTTGGAAAGCATCA+CGG - tig0041894:2660-2679 None:intergenic 45.0%
GCTAATTGCAGTGAAGTGAG+TGG + tig0041894:2899-2918 Msa1462050:intron 45.0%
GAGTTGCTCAATCAGCTTGA+TGG + tig0041894:2950-2969 Msa1462050:CDS 45.0%
GGTGAGGAAACTCAATCTTG+CGG - tig0041894:3374-3393 None:intergenic 45.0%
! CTAGCTCTTGCTTCTTCAGT+TGG - tig0041894:3396-3415 None:intergenic 45.0%
AGCAAGAGCTAGAATTCTGC+AGG + tig0041894:3404-3423 Msa1462050:CDS 45.0%
GAGCTAGAATTCTGCAGGTT+TGG + tig0041894:3409-3428 Msa1462050:intron 45.0%
CGGTCCACAGATGATTTCAA+TGG + tig0041894:3569-3588 Msa1462050:CDS 45.0%
CACACACACAAAATGGAGCA+TGG + tig0041894:4015-4034 Msa1462050:intron 45.0%
!!! CATAGGTTTTAGCTGCCCAT+TGG + tig0041894:4055-4074 Msa1462050:intron 45.0%
TCAAATGTAGGTGAACCACG+AGG + tig0041894:4363-4382 Msa1462050:intron 45.0%
! GGCTTGCTTTCTTCTTTGCT+TGG - tig0041894:4414-4433 None:intergenic 45.0%
GGTAACGTGAGCAGACATAA+GGG - tig0041894:4671-4690 None:intergenic 45.0%
AGGTAACGTGAGCAGACATA+AGG - tig0041894:4672-4691 None:intergenic 45.0%
! AGGTAGGGTGTTTGTCGATT+AGG + tig0041894:5189-5208 Msa1462050:intron 45.0%
ACGACGATGTTGAAGGAAGA+AGG - tig0041894:5219-5238 None:intergenic 45.0%
CAATTTGGGGACAACAATGG+TGG + tig0041894:5272-5291 Msa1462050:intron 45.0%
ACAATGGTGGCTTGAAGTCA+TGG + tig0041894:5285-5304 Msa1462050:intron 45.0%
TCACTCTGGTAACATCATGG+TGG + tig0041894:5322-5341 Msa1462050:intron 45.0%
GGAAGGAAGAAGATGAAGAC+AGG + tig0041894:5722-5741 Msa1462050:intron 45.0%
AACCGGATATGAGGTCTAAC+TGG + tig0041894:6117-6136 Msa1462050:intron 45.0%
! CACGATTGAGGTCTTTTCCT+AGG + tig0041894:6173-6192 Msa1462050:intron 45.0%
!! ATGTGCCTTTCTAGCTGTCT+TGG + tig0041894:6223-6242 Msa1462050:intron 45.0%
TTGTGTTTGGAAACGCAGCT+TGG - tig0041894:6326-6345 None:intergenic 45.0%
CTACTTTGCCTATGGCTTGA+AGG - tig0041894:6649-6668 Msa1462060:CDS 45.0%
!! CTCCTTAACTTGTGCCCTTA+GGG - tig0041894:6817-6836 Msa1462060:intron 45.0%
!! TCTCCTTAACTTGTGCCCTT+AGG - tig0041894:6818-6837 Msa1462060:intron 45.0%
GTTCCTTCTCCCTAAACTCA+AGG - tig0041894:7067-7086 Msa1462060:CDS 45.0%
TGTTGACACTTTCAGGCTTC+AGG - tig0041894:7214-7233 Msa1462060:CDS 45.0%
TGATGATCAAGCCGTCAAAG+TGG - tig0041894:7244-7263 Msa1462060:CDS 45.0%
GGAGCAGTGGATGTGAATAT+TGG - tig0041894:7309-7328 Msa1462060:CDS 45.0%
GAATGGAATGTTGTGGGAAG+TGG - tig0041894:7471-7490 Msa1462060:CDS 45.0%
CCCTGCAAGGAAATTGAGAA+TGG - tig0041894:7488-7507 Msa1462060:CDS 45.0%
GTTCTTCTTCCTGAAGCTTG+CGG + tig0041894:10181-10200 Msa1462050:intron 45.0%
TTTATCGTCCTCCCCATTTG+CGG + tig0041894:10218-10237 Msa1462050:intron 45.0%
! AGAGTGTTACTCCGCAAATG+GGG - tig0041894:10232-10251 None:intergenic 45.0%
!! GAAGAGTGTTACTCCGCAAA+TGG - tig0041894:10234-10253 None:intergenic 45.0%
!!! GGTTTTTTAGTGACGGTGAC+GGG - tig0041894:10256-10275 None:intergenic 45.0%
!!! CCGACGTGGTTTTTTAGTGA+CGG - tig0041894:10263-10282 None:intergenic 45.0%
CCGTCACTAAAAAACCACGT+CGG + tig0041894:10260-10279 Msa1462050:intron 45.0%
!! TTTTAGTCCGCTTTTGGGGA+GGG - tig0041894:10303-10322 None:intergenic 45.0%
GGTGGAGATGCTGAAAAGAT+TGG - tig0041894:10367-10386 None:intergenic 45.0%
!! GTTGGTAACGGAATGGAACT+CGG - tig0041894:10391-10410 None:intergenic 45.0%
!! GATGTAGGTTGGTAACGGAA+TGG - tig0041894:10398-10417 None:intergenic 45.0%
TCGATACCTTTCAAAGCCTC+TGG + tig0041894:10712-10731 Msa1462050:intron 45.0%
AAGGAAATCCCCACATCAAC+AGG - tig0041894:10903-10922 None:intergenic 45.0%
ACGATCTTGGCAAGCTACAT+AGG - tig0041894:11135-11154 None:intergenic 45.0%
!!! GTTTAATTATTTTATTTTTT+AGG - tig0041894:4948-4967 None:intergenic 5.0%
!!! TTATGTTTTATAATAAATTT+CGG - tig0041894:10570-10589 None:intergenic 5.0%
AATCGATATGGCGAGCGCAA+TGG + tig0041894:596-615 Msa1462050:exon 50.0%
CAACGAGATTCGCATCCTCA+AGG + tig0041894:698-717 Msa1462050:CDS 50.0%
TGATGTAGGAAGAGTCGCAG+AGG + tig0041894:828-847 Msa1462050:intron 50.0%
GGGTCAACAAGTCCAACAAC+TGG - tig0041894:1737-1756 None:intergenic 50.0%
GACCCTGACAAGCTAAAACC+TGG + tig0041894:1752-1771 Msa1462050:CDS 50.0%
GTGGGTCATTGGCAAAACGA+TGG - tig0041894:2042-2061 None:intergenic 50.0%
AAGCGCTCTTTGTGGGTCAT+TGG - tig0041894:2053-2072 None:intergenic 50.0%
!! CTTCTGGAAGCGCTCTTTGT+GGG - tig0041894:2060-2079 None:intergenic 50.0%
!! ACTTCTGGAAGCGCTCTTTG+TGG - tig0041894:2061-2080 None:intergenic 50.0%
GTTAGGAATTCGTCCTCCCA+AGG + tig0041894:2079-2098 Msa1462050:CDS 50.0%
!! TATAAGAGCACTCCCTTGGG+AGG - tig0041894:2095-2114 None:intergenic 50.0%
!! CCCAAGGGAGTGCTCTTATA+TGG + tig0041894:2095-2114 Msa1462050:CDS 50.0%
GTGCTCTTATATGGTCCACC+AGG + tig0041894:2104-2123 Msa1462050:CDS 50.0%
TTATATGGTCCACCAGGGAC+TGG + tig0041894:2110-2129 Msa1462050:CDS 50.0%
TATATGGTCCACCAGGGACT+GGG + tig0041894:2111-2130 Msa1462050:CDS 50.0%
! AAAGTTTTCCCAGTCCCTGG+TGG - tig0041894:2122-2141 None:intergenic 50.0%
CAATCGACCAGAACGCATGA+GGG - tig0041894:3349-3368 None:intergenic 50.0%
CTTGCTTCTTCAGTTGGGTG+AGG - tig0041894:3390-3409 None:intergenic 50.0%
ACTGAAGGCTGTCTGTGTTG+AGG + tig0041894:3598-3617 Msa1462050:CDS 50.0%
GGGCAGCTAAAACCTATGCT+CGG - tig0041894:4053-4072 None:intergenic 50.0%
ATAAGGTGATCGATGGAGGG+CGG + tig0041894:5142-5161 Msa1462050:intron 50.0%
! GTAACATCATGGTGGTGCAG+CGG + tig0041894:5330-5349 Msa1462050:intron 50.0%
ATCAGGTGTGTGGCTAAGAG+TGG + tig0041894:5473-5492 Msa1462050:intron 50.0%
TCAGGTGTGTGGCTAAGAGT+GGG + tig0041894:5474-5493 Msa1462050:intron 50.0%
!! GTTAGACCAGTTGAGTTGGG+AGG + tig0041894:5900-5919 Msa1462050:intron 50.0%
CATGATCCTCCCAACTCAAC+TGG - tig0041894:5909-5928 None:intergenic 50.0%
GGGAAGTTTATGGTTCGCCT+AGG - tig0041894:6193-6212 None:intergenic 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG + tig0041894:6812-6831 Msa1462050:intron 50.0%
GGTCCTTGAGTTTAGGGAGA+AGG + tig0041894:7061-7080 Msa1462050:intron 50.0%
GGGAAGTGGAAGGAAAGGTT+AGG - tig0041894:7457-7476 Msa1462060:intron 50.0%
GTTGTGGGAAGTGGAAGGAA+AGG - tig0041894:7462-7481 Msa1462060:CDS 50.0%
GGAATGTTGTGGGAAGTGGA+AGG - tig0041894:7467-7486 Msa1462060:CDS 50.0%
! TTTGTTGTGCCGCAAGCTTC+AGG - tig0041894:10193-10212 None:intergenic 50.0%
TGTATCTCCCTCCCCAAAAG+CGG + tig0041894:10293-10312 Msa1462050:intron 50.0%
!! GTTTTAGTCCGCTTTTGGGG+AGG - tig0041894:10304-10323 None:intergenic 50.0%
AGAGTCGCAGAGGACGAATC+TGG + tig0041894:838-857 Msa1462050:CDS 55.0%
! GCAGAGGACGAATCTGGAGT+TGG + tig0041894:844-863 Msa1462050:CDS 55.0%
GAATCCAGAAGACGAGGCTG+AGG + tig0041894:1408-1427 Msa1462050:CDS 55.0%
TCTTCCTCAGCCTCGTCTTC+TGG - tig0041894:1415-1434 None:intergenic 55.0%
GAAGACGAGGCTGAGGAAGA+TGG + tig0041894:1415-1434 Msa1462050:CDS 55.0%
GTCATACCTGGACCAGCTGA+GGG - tig0041894:2199-2218 None:intergenic 55.0%
CAGTGAAGTGAGTGGGGACA+GGG + tig0041894:2907-2926 Msa1462050:intron 55.0%
CCAATCGACCAGAACGCATG+AGG - tig0041894:3350-3369 None:intergenic 55.0%
CCTCATGCGTTCTGGTCGAT+TGG + tig0041894:3347-3366 Msa1462050:CDS 55.0%
AAGGCTGTCTGTGTTGAGGC+TGG + tig0041894:3602-3621 Msa1462050:CDS 55.0%
CTGTGTTGAGGCTGGCATGT+TGG + tig0041894:3610-3629 Msa1462050:CDS 55.0%
TCTACGCCGTGATGCAACTG+AGG + tig0041894:3634-3653 Msa1462050:CDS 55.0%
GCCAACAGAGATCAGGTGTG+TGG + tig0041894:5463-5482 Msa1462050:intron 55.0%
GCCACACACCTGATCTCTGT+TGG - tig0041894:5467-5486 None:intergenic 55.0%
GGGAGGATCATGTGTCTGTC+TGG + tig0041894:5917-5936 Msa1462050:intron 55.0%
! GGGGAGAGCATGCATGATGA+TGG - tig0041894:6723-6742 Msa1462060:CDS 55.0%
GGTGCTAACCCTTCTGCAGA+GGG - tig0041894:7288-7307 Msa1462060:CDS 55.0%
! TGGTGCTAACCCTTCTGCAG+AGG - tig0041894:7289-7308 Msa1462060:CDS 55.0%
! GTGGGTTGTTCAAGGAGCAG+TGG - tig0041894:7322-7341 Msa1462060:intron 55.0%
CTCTGACTCATTCCCCTGCA+AGG - tig0041894:7501-7520 Msa1462060:CDS 55.0%
! GTGTTACTCCGCAAATGGGG+AGG - tig0041894:10229-10248 None:intergenic 55.0%
TACACAGTGCTTTGCCGACG+TGG - tig0041894:10277-10296 None:intergenic 55.0%
AACGGAATGGAACTCGGAGG+TGG - tig0041894:10385-10404 None:intergenic 55.0%
!! GGTAACGGAATGGAACTCGG+AGG - tig0041894:10388-10407 None:intergenic 55.0%
TTGTCTGGGCTGCACAGGCA+CGG - tig0041894:2151-2170 None:intergenic 60.0%
GGCATTTGTCTGGGCTGCAC+AGG - tig0041894:2156-2175 None:intergenic 60.0%
GAAGTTAGCAGGCCCTCAGC+TGG + tig0041894:2184-2203 Msa1462050:CDS 60.0%
GGTCATACCTGGACCAGCTG+AGG - tig0041894:2200-2219 None:intergenic 60.0%
GCAGTGAAGTGAGTGGGGAC+AGG + tig0041894:2906-2925 Msa1462050:intron 60.0%
TGAAGTGAGTGGGGACAGGG+AGG + tig0041894:2910-2929 Msa1462050:CDS 60.0%
GATCCTGCCCTCATGCGTTC+TGG + tig0041894:3339-3358 Msa1462050:CDS 60.0%
GGTGTGTGGCTAAGAGTGGG+CGG + tig0041894:5477-5496 Msa1462050:intron 60.0%
TAAGAGTGGGCGGCGATGGT+GGG + tig0041894:5487-5506 Msa1462050:intron 60.0%
! ACGCAGCTTGGCGCATTGGT+CGG - tig0041894:6314-6333 None:intergenic 60.0%
GGAAACGCAGCTTGGCGCAT+TGG - tig0041894:6318-6337 None:intergenic 60.0%
GAGGGTGGAGACGAGGATGA+CGG - tig0041894:7270-7289 Msa1462060:CDS 60.0%
TTCTGCAGAGGGTGGAGACG+AGG - tig0041894:7277-7296 Msa1462060:CDS 60.0%
TCGTCTCCACCCTCTGCAGA+AGG + tig0041894:7276-7295 Msa1462050:intron 60.0%
CGTCTCCACCCTCTGCAGAA+GGG + tig0041894:7277-7296 Msa1462050:intron 60.0%
GCTAACCCTTCTGCAGAGGG+TGG - tig0041894:7285-7304 Msa1462060:CDS 60.0%
TGTCTGGGCTGCACAGGCAC+GGG - tig0041894:2150-2169 None:intergenic 65.0%
CGACCAGAACGCATGAGGGC+AGG - tig0041894:3345-3364 None:intergenic 65.0%
TGGCTAAGAGTGGGCGGCGA+TGG + tig0041894:5483-5502 Msa1462050:intron 65.0%
CTAAGAGTGGGCGGCGATGG+TGG + tig0041894:5486-5505 Msa1462050:intron 65.0%
AGCAGGCCCTCAGCTGGTCC+AGG + tig0041894:2190-2209 Msa1462050:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0041894 gene 361 11193 361 ID=Msa1462050;Name=Msa1462050
tig0041894 mRNA 361 11193 361 ID=Msa1462050-mRNA-1;Parent=Msa1462050;Name=Msa1462050-mRNA-1;_AED=0.11;_eAED=0.11;_QI=220|1|1|1|0.75|0.61|13|176|423
tig0041894 exon 361 523 361 ID=Msa1462050-mRNA-1:exon:23466;Parent=Msa1462050-mRNA-1
tig0041894 exon 546 719 546 ID=Msa1462050-mRNA-1:exon:23467;Parent=Msa1462050-mRNA-1
tig0041894 exon 836 952 836 ID=Msa1462050-mRNA-1:exon:23468;Parent=Msa1462050-mRNA-1
tig0041894 exon 1397 1504 1397 ID=Msa1462050-mRNA-1:exon:23469;Parent=Msa1462050-mRNA-1
tig0041894 exon 1722 1913 1722 ID=Msa1462050-mRNA-1:exon:23470;Parent=Msa1462050-mRNA-1
tig0041894 exon 2020 2211 2020 ID=Msa1462050-mRNA-1:exon:23471;Parent=Msa1462050-mRNA-1
tig0041894 exon 2628 2746 2628 ID=Msa1462050-mRNA-1:exon:23472;Parent=Msa1462050-mRNA-1
tig0041894 exon 2910 2997 2910 ID=Msa1462050-mRNA-1:exon:23473;Parent=Msa1462050-mRNA-1
tig0041894 exon 3306 3425 3306 ID=Msa1462050-mRNA-1:exon:23474;Parent=Msa1462050-mRNA-1
tig0041894 exon 3515 3655 3515 ID=Msa1462050-mRNA-1:exon:23475;Parent=Msa1462050-mRNA-1
tig0041894 exon 4373 4525 4373 ID=Msa1462050-mRNA-1:exon:23476;Parent=Msa1462050-mRNA-1
tig0041894 exon 4552 4584 4552 ID=Msa1462050-mRNA-1:exon:23477;Parent=Msa1462050-mRNA-1
tig0041894 exon 11126 11193 11126 ID=Msa1462050-mRNA-1:exon:23478;Parent=Msa1462050-mRNA-1
tig0041894 five_prime_UTR 361 523 361 ID=Msa1462050-mRNA-1:five_prime_utr;Parent=Msa1462050-mRNA-1
tig0041894 five_prime_UTR 546 602 546 ID=Msa1462050-mRNA-1:five_prime_utr;Parent=Msa1462050-mRNA-1
tig0041894 CDS 603 719 603 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 836 952 836 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 1397 1504 1397 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 1722 1913 1722 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 2020 2211 2020 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 2628 2746 2628 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 2910 2997 2910 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 3306 3425 3306 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 3515 3655 3515 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 CDS 4373 4450 4373 ID=Msa1462050-mRNA-1:cds;Parent=Msa1462050-mRNA-1
tig0041894 three_prime_UTR 4451 4525 4451 ID=Msa1462050-mRNA-1:three_prime_utr;Parent=Msa1462050-mRNA-1
tig0041894 three_prime_UTR 4552 4584 4552 ID=Msa1462050-mRNA-1:three_prime_utr;Parent=Msa1462050-mRNA-1
tig0041894 three_prime_UTR 11126 11193 11126 ID=Msa1462050-mRNA-1:three_prime_utr;Parent=Msa1462050-mRNA-1
Gene Sequence

>Msa1462050

ATGGCGAGCGCAATGGTAGAAGATGCTAACTTTGAAGATGACCAATTAGCGAATATGAGCACCGACGATATCGTCAGAGCTTCTCGTCTTCTCGACAACGAGATTCGCATCCTCAAGGAAGAGTCGCAGAGGACGAATCTGGAGTTGGAATCGTATAAAGAGAAGATTAAAGAGAATCAAGAGAAAATTAAGCTTAATAAACAATTACCCTATCTTGTTGGTAACATTGTTGAGATATTGGAAATGAATCCAGAAGACGAGGCTGAGGAAGATGGTGCCAATATTGATCTTGACTCACAAAGGAAGGGAAAATGTGTTGTGCTAAAAACATCTACTCGACAGACAATCTTTCTTCCAGTTGTTGGACTTGTTGACCCTGACAAGCTAAAACCTGGTGATCTTGTTGGTGTAAACAAAGATAGTTACTTAATCTTGGATACTCTGCCTTCTGAGTATGATTCTAGAGTTAAGGCCATGGAAGTTGATGAAAAGCCAACAGAGGACTACAATGACATTGGTGGATTAGAGAAGCAGATCCAAGAATTGGTTGAAGCCATCGTTTTGCCAATGACCCACAAAGAGCGCTTCCAGAAGTTAGGAATTCGTCCTCCCAAGGGAGTGCTCTTATATGGTCCACCAGGGACTGGGAAAACTTTAATGGCCCGTGCCTGTGCAGCCCAGACAAATGCCACTTTTCTGAAGTTAGCAGGCCCTCAGCTGGTCCAGATGTTCATAGGAGACGGAGCAAAACTTGTCCGTGATGCTTTCCAACTCGCAAAAGAAAAGTCACCATGCATTATATTTATAGATGAAATCGATGCAATTGGTACAAAGCGTTTTGATAGTGAAGTGAGTGGGGACAGGGAGGTTCAAAGAACCATGTTAGAGTTGCTCAATCAGCTTGATGGTTTTAGCAGTGATGACCGAATTAAGGTGATAGCAGCAACAAATCGTGCAGATATTCTTGATCCTGCCCTCATGCGTTCTGGTCGATTGGACCGCAAGATTGAGTTTCCTCACCCAACTGAAGAAGCAAGAGCTAGAATTCTGCAGATCCATTCAAGGAAGATGAATGTTCACCCAGATGTAAATTTTGAAGAACTAGCTCGGTCCACAGATGATTTCAATGGAGCACAACTGAAGGCTGTCTGTGTTGAGGCTGGCATGTTGGCTCTACGCCGTGATGCAACTGAGGTGAACCACGAGGACTTTAATGAAGGTATAATTCAAGTCCAAGCAAAGAAGAAAGCAAGCCTGAACTATTATGCTTAA
Protein sequence

>Msa1462050

MASAMVEDANFEDDQLANMSTDDIVRASRLLDNEIRILKEESQRTNLELESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA*