AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0454550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454550 MtrunA17_Chr3g0101011 91.102 944 76 5 1 938 1 942 0.0 1713
Msa0454550 MtrunA17_Chr3g0101201 50.527 948 422 22 1 929 1 920 0.0 825
Msa0454550 MtrunA17_Chr3g0101271 51.425 912 403 19 28 930 7 887 0.0 810
Msa0454550 MtrunA17_Chr3g0101241 51.425 912 403 19 28 930 7 887 0.0 808
Msa0454550 MtrunA17_Chr3g0101221 49.948 955 429 23 1 932 1 929 0.0 805
Msa0454550 MtrunA17_Chr3g0101321 49.075 919 442 14 14 927 6 903 0.0 799
Msa0454550 MtrunA17_Chr3g0112511 50.271 923 424 19 14 929 6 900 0.0 798
Msa0454550 MtrunA17_Chr3g0101331 49.244 926 424 19 1 902 1 904 0.0 798
Msa0454550 MtrunA17_Chr3g0101231 48.574 947 450 17 1 929 1 928 0.0 796
Msa0454550 MtrunA17_Chr3g0100831 48.199 944 449 20 1 936 1 912 0.0 786
Msa0454550 MtrunA17_Chr1g0189351 49.244 926 418 19 1 902 1 898 0.0 784
Msa0454550 MtrunA17_Chr3g0100961 47.812 937 454 18 1 932 1 907 0.0 779
Msa0454550 MtrunA17_Chr3g0101251 48.316 950 402 23 1 929 1 882 0.0 766
Msa0454550 MtrunA17_Chr3g0080741 45.926 945 475 18 1 929 1 925 0.0 752
Msa0454550 MtrunA17_Chr3g0094301 46.759 941 471 16 1 929 1 923 0.0 745
Msa0454550 MtrunA17_Chr7g0229761 46.759 941 471 16 1 929 1 923 0.0 745
Msa0454550 MtrunA17_Chr3g0101181 48.405 909 424 21 27 911 29 916 0.0 739
Msa0454550 MtrunA17_Chr1g0151481 45.616 958 475 20 1 939 1 931 0.0 738
Msa0454550 MtrunA17_Chr3g0080601 45.261 939 487 14 1 929 1 922 0.0 735
Msa0454550 MtrunA17_Chr3g0080771 45.900 939 477 16 1 927 1 920 0.0 731
Msa0454550 MtrunA17_Chr3g0080751 43.900 959 509 17 1 947 1 942 0.0 724
Msa0454550 MtrunA17_Chr3g0080791 45.705 943 473 18 1 927 1 920 0.0 716
Msa0454550 MtrunA17_Chr3g0081341 44.690 951 489 16 1 937 66 993 0.0 706
Msa0454550 MtrunA17_Chr3g0100971 51.647 759 334 16 1 752 1 733 0.0 706
Msa0454550 MtrunA17_Chr3g0081211 45.165 941 485 15 1 929 1 922 0.0 695
Msa0454550 MtrunA17_Chr3g0081391 43.584 943 498 16 1 929 1 923 0.0 688
Msa0454550 MtrunA17_Chr3g0100801 47.080 839 369 16 14 847 3 771 0.0 687
Msa0454550 MtrunA17_Chr3g0080731 42.677 949 514 15 1 938 1 930 0.0 678
Msa0454550 MtrunA17_Chr3g0081191 43.849 951 492 18 1 936 1 924 0.0 676
Msa0454550 MtrunA17_Chr3g0081361 41.872 972 526 16 1 954 1 951 0.0 665
Msa0454550 MtrunA17_Chr3g0081371 43.386 945 491 16 1 929 13 929 0.0 664
Msa0454550 MtrunA17_Chr3g0100851 47.541 793 380 15 120 906 2 764 0.0 659
Msa0454550 MtrunA17_Chr3g0080631 42.162 925 468 15 17 929 9 878 0.0 654
Msa0454550 MtrunA17_Chr3g0100761 48.800 750 319 15 10 752 2 693 0.0 648
Msa0454550 MtrunA17_Chr3g0081181 42.463 942 500 16 1 932 1 910 0.0 622
Msa0454550 MtrunA17_Chr3g0100681 53.704 594 258 13 200 788 1 582 0.0 564
Msa0454550 MtrunA17_Chr3g0080721 47.111 675 339 12 272 938 2 666 0.0 564
Msa0454550 MtrunA17_Chr3g0100731 46.774 682 339 14 257 930 1 666 0.0 541
Msa0454550 MtrunA17_Chr5g0410001 35.753 923 549 20 21 927 12 906 2.56e-174 532
Msa0454550 MtrunA17_Chr5g0410031 35.201 946 559 20 1 927 1 911 1.32e-169 520
Msa0454550 MtrunA17_Chr5g0410021 35.911 944 548 16 1 927 1 904 1.86e-165 509
Msa0454550 MtrunA17_Chr5g0409991 35.269 947 548 17 1 927 1 902 2.14e-163 504
Msa0454550 MtrunA17_Chr5g0409971 34.523 953 570 18 1 936 1 916 5.72e-157 487
Msa0454550 MtrunA17_Chr3g0101391 47.871 587 282 12 329 902 1 576 4.20e-156 473
Msa0454550 MtrunA17_Chr3g0080651 46.787 607 307 9 339 938 248 845 8.73e-156 481
Msa0454550 MtrunA17_Chr3g0080651 39.149 235 133 3 1 235 4 228 6.00e-37 150
Msa0454550 MtrunA17_Chr3g0084351 44.797 567 297 11 78 641 1 554 2.51e-146 446
Msa0454550 MtrunA17_Chr3g0101211 51.544 421 180 11 215 629 1 403 2.92e-129 396
Msa0454550 MtrunA17_Chr1g0189271 58.769 325 129 5 177 498 2 324 1.59e-125 384
Msa0454550 MtrunA17_Chr3g0100781 51.316 380 172 8 10 385 2 372 1.53e-121 375
Msa0454550 MtrunA17_Chr3g0100701 44.842 475 233 12 466 932 285 738 2.18e-99 329
Msa0454550 MtrunA17_Chr3g0100701 49.660 294 134 4 1 292 1 282 1.64e-77 269
Msa0454550 MtrunA17_Chr5g0404741 29.036 954 601 23 1 927 1 905 4.12e-98 330
Msa0454550 MtrunA17_Chr2g0299001 28.664 928 592 28 34 925 26 919 4.72e-98 330
Msa0454550 MtrunA17_Chr5g0444301 45.614 456 225 10 455 899 1 444 2.99e-94 306
Msa0454550 MtrunA17_Chr3g0100791 44.573 433 227 8 477 906 1 423 3.03e-93 303
Msa0454550 MtrunA17_Chr3g0101361 41.649 485 243 9 476 930 295 769 7.00e-91 306
Msa0454550 MtrunA17_Chr3g0101361 56.711 298 116 8 1 292 1 291 2.05e-90 305
Msa0454550 MtrunA17_Chr1g0149071 36.755 604 218 16 251 849 8 452 6.22e-90 295
Msa0454550 MtrunA17_Chr3g0101421 49.324 296 138 6 1 294 1 286 1.28e-83 271
Msa0454550 MtrunA17_Chr4g0037421 29.534 965 561 34 1 897 38 951 1.44e-83 290
Msa0454550 MtrunA17_Chr7g0219851 28.398 986 593 32 1 927 3 934 1.30e-82 287
Msa0454550 MtrunA17_Chr3g0101341 54.015 274 108 6 31 292 1 268 6.76e-79 258
Msa0454550 MtrunA17_Chr3g0101351 56.303 238 96 4 1 237 5 235 1.28e-74 247
Msa0454550 MtrunA17_Chr1g0189281 43.603 383 193 10 525 895 2 373 2.22e-70 238
Msa0454550 MtrunA17_Chr1g0197241 27.481 917 565 29 32 902 670 1532 2.44e-70 256
Msa0454550 MtrunA17_Chr8g0352831 27.578 892 552 34 61 898 57 908 2.57e-65 240
Msa0454550 MtrunA17_Chr3g0085451 29.427 768 452 33 181 901 140 864 2.56e-60 224
Msa0454550 MtrunA17_Chr6g0467961 26.853 931 550 37 1 885 1 846 1.08e-59 220
Msa0454550 MtrunA17_Chr2g0316291 27.200 875 543 35 32 861 28 853 6.93e-59 219
Msa0454550 MtrunA17_Chr3g0086181 28.681 781 462 32 181 913 150 883 3.64e-58 216
Msa0454550 MtrunA17_Chr1g0189321 49.796 245 110 6 418 655 1 239 3.78e-58 200
Msa0454550 MtrunA17_Chr6g0468451 26.427 946 575 37 10 910 2 871 1.36e-57 216
Msa0454550 MtrunA17_Chr3g0082791 27.912 910 543 37 53 913 49 894 1.27e-56 212
Msa0454550 MtrunA17_Chr3g0096971 53.631 179 76 4 275 450 1 175 1.37e-56 192
Msa0454550 MtrunA17_Chr7g0248531 28.230 836 475 33 96 873 57 825 1.97e-56 211
Msa0454550 MtrunA17_Chr5g0431051 26.756 968 562 39 11 918 3 883 2.24e-56 211
Msa0454550 MtrunA17_Chr6g0470081 27.001 937 561 39 11 899 3 864 3.47e-56 211
Msa0454550 MtrunA17_Chr3g0086221 28.122 921 551 41 37 913 33 886 4.37e-56 211
Msa0454550 MtrunA17_Chr5g0430721 25.926 918 564 33 11 881 44 892 4.54e-56 211
Msa0454550 MtrunA17_Chr3g0085561 26.976 797 481 25 153 895 106 855 8.15e-56 209
Msa0454550 MtrunA17_Chr3g0090651 28.267 750 460 30 181 896 165 870 1.52e-55 209
Msa0454550 MtrunA17_Chr5g0415471 25.325 924 604 32 11 899 3 875 3.43e-55 208
Msa0454550 MtrunA17_Chr6g0470011 26.609 932 565 38 11 896 3 861 3.74e-55 208
Msa0454550 MtrunA17_Chr3g0090141 25.935 775 456 31 181 901 165 875 8.27e-55 207
Msa0454550 MtrunA17_Chr3g0082101 32.225 481 247 16 206 673 198 612 1.29e-54 206
Msa0454550 MtrunA17_Chr6g0470021 29.122 752 442 32 175 881 36 741 1.35e-54 205
Msa0454550 MtrunA17_Chr8g0352861 27.034 799 471 28 177 903 152 910 1.42e-54 207
Msa0454550 MtrunA17_Chr3g0100721 49.545 220 102 4 16 234 8 219 3.30e-54 187
Msa0454550 MtrunA17_Chr3g0087581 26.387 955 569 37 37 922 33 922 3.69e-54 205
Msa0454550 MtrunA17_Chr5g0414311 24.815 947 600 33 19 904 11 906 1.03e-53 204
Msa0454550 MtrunA17_Chr3g0085651 26.053 902 574 33 37 898 33 881 1.56e-53 204
Msa0454550 MtrunA17_Chr3g0091081 28.235 765 466 31 181 899 165 892 1.69e-53 203
Msa0454550 MtrunA17_Chr3g0086151 28.468 692 409 27 181 829 150 798 1.91e-53 201
Msa0454550 MtrunA17_Chr6g0468021 27.077 927 541 39 11 885 3 846 3.44e-53 202
Msa0454550 MtrunA17_Chr3g0084051 28.809 722 426 29 181 861 168 842 5.80e-53 201
Msa0454550 MtrunA17_Chr3g0085331 27.568 740 444 25 153 843 137 833 7.79e-53 201
Msa0454550 MtrunA17_Chr3g0086161 28.327 759 468 29 181 897 150 874 9.53e-53 201
Msa0454550 MtrunA17_Chr3g0091061 27.963 751 461 29 181 896 165 870 1.06e-52 201
Msa0454550 MtrunA17_Chr7g0248221 27.545 668 421 23 27 673 23 648 1.83e-52 198
Msa0454550 MtrunA17_Chr3g0090431 26.393 754 463 29 181 881 37 751 2.05e-52 199
Msa0454550 MtrunA17_Chr4g0025391 26.361 808 483 29 181 910 156 929 2.58e-52 200
Msa0454550 MtrunA17_Chr1g0155321 26.261 952 577 35 11 915 3 876 3.32e-52 199
Msa0454550 MtrunA17_Chr3g0089871 26.829 779 461 30 181 904 157 881 3.90e-52 199
Msa0454550 MtrunA17_Chr3g0085501 28.011 739 439 26 153 843 137 830 3.91e-52 199
Msa0454550 MtrunA17_Chr1g0164611 31.902 489 290 17 206 673 198 664 4.04e-52 199
Msa0454550 MtrunA17_Chr1g0189551 26.029 826 517 31 34 824 58 824 5.28e-52 197
Msa0454550 MtrunA17_Chr1g0164391 27.964 658 371 21 61 673 56 655 5.98e-52 198
Msa0454550 MtrunA17_Chr7g0257201 24.945 906 537 36 34 899 30 832 7.47e-52 196
Msa0454550 MtrunA17_Chr6g0468121 25.322 932 566 37 1 885 1 849 8.76e-52 198
Msa0454550 MtrunA17_Chr3g0087701 27.738 840 486 34 39 829 35 802 8.83e-52 198
Msa0454550 MtrunA17_Chr3g0089911 27.504 589 358 21 117 673 100 651 1.22e-51 193
Msa0454550 MtrunA17_Chr3g0090401 25.896 753 437 31 181 892 376 1048 1.29e-51 198
Msa0454550 MtrunA17_Chr5g0430621 26.431 961 557 38 11 910 3 874 1.47e-51 197
Msa0454550 MtrunA17_Chr2g0282991 26.087 805 498 30 27 791 26 773 1.50e-51 197
Msa0454550 MtrunA17_Chr3g0084361 45.417 240 130 1 688 927 1 239 1.67e-51 182
Msa0454550 MtrunA17_Chr3g0082131 27.709 895 537 39 59 894 53 896 1.77e-51 197
Msa0454550 MtrunA17_Chr4g0051651 26.855 674 416 21 19 651 33 670 1.89e-51 192
Msa0454550 MtrunA17_Chr3g0089651 28.005 832 473 44 181 943 169 943 2.07e-51 197
Msa0454550 MtrunA17_Chr3g0090371 26.603 842 475 35 181 945 165 940 2.23e-51 197
Msa0454550 MtrunA17_Chr3g0087841 25.118 844 494 35 181 949 165 945 2.48e-51 196
Msa0454550 MtrunA17_Chr3g0090691 28.382 754 453 31 181 896 165 869 5.05e-51 196
Msa0454550 MtrunA17_Chr3g0087541 28.515 761 461 31 181 895 168 891 1.48e-50 194
Msa0454550 MtrunA17_Chr5g0430141 25.773 970 579 35 11 921 3 890 1.85e-50 193
Msa0454550 MtrunA17_Chr5g0446611 28.629 744 394 33 207 890 196 862 2.44e-50 192
Msa0454550 MtrunA17_Chr7g0257541 24.697 907 529 35 34 895 32 829 3.08e-50 191
Msa0454550 MtrunA17_Chr2g0299091 27.972 715 426 25 129 803 102 767 4.20e-50 192
Msa0454550 MtrunA17_Chr8g0348931 26.136 792 475 27 181 895 164 922 4.52e-50 192
Msa0454550 MtrunA17_Chr3g0087731 29.557 609 372 22 219 802 2 578 4.67e-50 191
Msa0454550 MtrunA17_Chr3g0082311 27.273 660 372 22 61 673 56 654 5.22e-50 192
Msa0454550 MtrunA17_Chr5g0430511 26.480 963 568 38 11 915 3 883 5.32e-50 192
Msa0454550 MtrunA17_Chr3g0092241 28.707 526 304 20 181 673 165 652 5.99e-50 192
Msa0454550 MtrunA17_Chr3g0085801 26.633 781 464 28 159 897 145 858 9.24e-50 191
Msa0454550 MtrunA17_Chr3g0092261 24.837 922 517 36 38 916 85 873 9.29e-50 192
Msa0454550 MtrunA17_Chr3g0082391 26.453 688 408 25 27 673 25 655 9.66e-50 189
Msa0454550 MtrunA17_Chr1g0197201 25.799 845 522 25 130 906 541 1348 1.63e-49 191
Msa0454550 MtrunA17_Chr5g0433771 25.942 902 531 36 27 895 23 820 1.73e-49 189
Msa0454550 MtrunA17_Chr6g0475491 27.164 670 409 23 32 673 28 646 2.60e-49 188
Msa0454550 MtrunA17_Chr2g0309721 24.922 967 556 43 75 943 41 935 2.64e-49 190
Msa0454550 MtrunA17_Chr3g0086091 29.249 759 437 34 219 913 2 724 2.73e-49 189
Msa0454550 MtrunA17_Chr3g0089211 27.308 780 449 36 181 895 212 938 2.81e-49 190
Msa0454550 MtrunA17_Chr7g0221481 28.902 692 409 27 159 802 129 785 2.85e-49 188
Msa0454550 MtrunA17_Chr4g0027251 26.082 970 571 34 11 918 3 888 3.09e-49 189
Msa0454550 MtrunA17_Chr3g0089991 27.706 693 400 29 181 821 169 812 3.54e-49 190
Msa0454550 MtrunA17_Chr6g0467911 27.196 831 492 35 11 800 3 761 3.67e-49 187
Msa0454550 MtrunA17_Chr8g0346831 24.817 955 586 34 32 900 28 936 5.53e-49 189
Msa0454550 MtrunA17_Chr3g0081841 47.170 212 106 4 177 386 2 209 6.75e-49 181
Msa0454550 MtrunA17_Chr3g0081841 45.522 134 71 2 473 606 212 343 2.66e-24 107
Msa0454550 MtrunA17_Chr3g0081841 43.564 101 56 1 726 826 384 483 1.15e-14 77.8
Msa0454550 MtrunA17_Chr6g0468271 25.789 919 566 36 10 881 2 851 9.59e-49 188
Msa0454550 MtrunA17_Chr4g0020501 25.926 648 381 22 59 682 10 582 1.34e-48 187
Msa0454550 MtrunA17_Chr5g0430641 25.603 953 595 36 8 918 1 881 1.43e-48 187
Msa0454550 MtrunA17_Chr3g0084971 26.488 823 475 32 59 826 55 802 1.52e-48 188
Msa0454550 MtrunA17_Chr2g0299101 27.894 717 424 26 129 803 128 793 1.93e-48 186
Msa0454550 MtrunA17_Chr5g0429961 25.261 958 584 38 11 918 3 878 2.13e-48 187
Msa0454550 MtrunA17_Chr3g0089541 26.908 773 461 34 181 895 169 895 2.19e-48 187
Msa0454550 MtrunA17_Chr5g0414181 25.608 945 561 39 11 895 3 865 3.12e-48 186
Msa0454550 MtrunA17_Chr3g0113791 25.674 779 505 29 176 914 145 889 3.30e-48 186
Msa0454550 MtrunA17_Chr3g0089781 26.551 919 510 40 75 895 41 892 3.41e-48 186
Msa0454550 MtrunA17_Chr6g0468151 25.959 886 550 31 21 865 13 833 4.94e-48 186
Msa0454550 MtrunA17_Chr5g0430581 25.992 958 573 37 11 918 3 874 7.25e-48 185
Msa0454550 MtrunA17_Chr2g0299151 26.492 838 510 31 133 909 104 896 9.09e-48 185
Msa0454550 MtrunA17_Chr1g0169901 25.890 927 565 37 27 896 26 887 1.16e-47 185
Msa0454550 MtrunA17_Chr3g0082811 26.087 667 426 25 167 802 141 771 1.48e-47 182
Msa0454550 MtrunA17_Chr3g0089811 26.122 980 552 48 68 943 28 939 1.81e-47 184
Msa0454550 MtrunA17_Chr3g0089761 27.020 755 434 34 181 883 165 854 2.11e-47 184
Msa0454550 MtrunA17_Chr3g0085471 27.573 758 462 27 181 896 168 880 2.29e-47 184
Msa0454550 MtrunA17_Chr3g0089961 25.700 786 469 35 150 892 148 861 4.47e-47 182
Msa0454550 MtrunA17_Chr3g0084031 25.543 783 475 29 181 910 170 897 4.89e-47 183
Msa0454550 MtrunA17_Chr3g0123111 25.574 915 566 36 11 881 3 846 5.08e-47 183
Msa0454550 MtrunA17_Chr5g0414201 25.591 930 550 36 19 885 11 861 5.26e-47 182
Msa0454550 MtrunA17_Chr3g0089591 28.767 511 322 18 181 673 170 656 6.25e-47 183
Msa0454550 MtrunA17_Chr7g0244231 25.797 973 553 40 11 915 3 874 6.71e-47 182
Msa0454550 MtrunA17_Chr3g0113481 27.383 661 409 24 176 802 145 768 7.33e-47 180
Msa0454550 MtrunA17_Chr3g0089501 27.389 701 389 31 181 818 163 806 7.82e-47 181
Msa0454550 MtrunA17_Chr3g0084081 28.720 672 411 28 164 802 148 784 1.08e-46 182
Msa0454550 MtrunA17_Chr3g0089421 24.862 909 540 41 75 895 41 894 1.36e-46 182
Msa0454550 MtrunA17_Chr3g0089601 25.779 834 463 36 75 818 39 806 1.80e-46 180
Msa0454550 MtrunA17_Chr3g0089251 27.471 688 405 30 181 818 194 837 3.08e-46 181
Msa0454550 MtrunA17_Chr3g0082351 26.440 677 419 23 27 673 25 652 3.95e-46 180
Msa0454550 MtrunA17_Chr3g0085931 25.053 938 598 36 11 910 3 873 4.30e-46 180
Msa0454550 MtrunA17_Chr2g0299121 27.615 717 426 24 129 803 128 793 6.46e-46 179
Msa0454550 MtrunA17_Chr3g0086621 27.226 775 473 30 181 896 150 892 6.56e-46 179
Msa0454550 MtrunA17_Chr4g0009781 27.510 767 462 29 175 885 151 879 1.36e-45 178
Msa0454550 MtrunA17_Chr3g0100911 45.957 235 118 4 644 875 2 230 1.90e-45 163
Msa0454550 MtrunA17_Chr4g0010261 27.007 685 431 22 175 826 151 799 2.09e-45 177
Msa0454550 MtrunA17_Chr5g0430441 25.756 959 587 38 11 921 3 884 2.27e-45 177
Msa0454550 MtrunA17_Chr3g0082871 25.399 689 433 25 45 701 19 658 2.36e-45 175
Msa0454550 MtrunA17_Chr8g0344071 30.906 508 279 17 184 664 446 908 2.57e-45 177
Msa0454550 MtrunA17_Chr4g0010201 27.330 633 383 22 175 769 151 744 2.84e-45 177
Msa0454550 MtrunA17_Chr1g0164581 28.765 737 450 30 203 894 166 872 6.11e-45 176
Msa0454550 MtrunA17_Chr5g0429951 26.887 755 450 29 11 731 3 689 8.70e-45 175
Msa0454550 MtrunA17_Chr8g0338621 25.982 662 421 25 32 673 28 640 1.09e-44 172
Msa0454550 MtrunA17_Chr3g0082881 25.352 710 444 27 170 829 145 818 2.17e-44 173
Msa0454550 MtrunA17_Chr1g0147141 25.892 757 455 28 158 858 146 852 2.30e-44 174
Msa0454550 MtrunA17_Chr3g0089471 28.405 514 321 20 181 673 166 653 3.65e-44 174
Msa0454550 MtrunA17_Chr4g0008461 28.195 532 314 14 203 683 153 667 3.71e-44 174
Msa0454550 MtrunA17_Chr3g0101401 48.663 187 90 4 93 276 1 184 4.99e-44 157
Msa0454550 MtrunA17_Chr3g0083621 25.217 920 531 36 63 892 63 915 8.47e-44 173
Msa0454550 MtrunA17_Chr1g0155991 25.422 948 582 33 11 910 3 873 1.01e-43 172
Msa0454550 MtrunA17_Chr5g0430291 24.611 963 586 34 11 915 3 883 2.28e-43 171
Msa0454550 MtrunA17_Chr7g0257221 23.810 903 557 32 27 895 23 828 2.43e-43 170
Msa0454550 MtrunA17_Chr8g0338671 27.969 522 322 18 175 673 39 529 2.58e-43 167
Msa0454550 MtrunA17_Chr6g0468331 25.431 696 428 25 11 659 3 654 4.30e-43 168
Msa0454550 MtrunA17_Chr8g0338391 24.169 662 445 22 32 679 28 646 9.69e-43 169
Msa0454550 MtrunA17_Chr1g0169951 26.009 669 429 24 39 674 28 663 1.59e-42 167
Msa0454550 MtrunA17_Chr1g0164631 26.458 703 420 25 59 730 54 690 1.91e-42 168
Msa0454550 MtrunA17_Chr6g0456131 25.330 908 564 32 64 911 49 902 2.48e-42 168
Msa0454550 MtrunA17_Chr5g0430951 25.513 780 487 29 11 762 3 716 3.05e-42 167
Msa0454550 MtrunA17_Chr3g0085551 25.360 694 413 24 181 831 42 673 3.76e-42 166
Msa0454550 MtrunA17_Chr6g0471941 25.449 668 418 25 32 673 28 641 4.50e-42 167
Msa0454550 MtrunA17_Chr6g0468341 28.056 499 312 18 11 501 3 462 7.09e-42 166
Msa0454550 MtrunA17_Chr4g0010221 27.687 614 375 24 175 754 151 729 1.07e-41 166
Msa0454550 MtrunA17_Chr3g0083751 28.780 549 331 17 209 724 181 702 1.43e-41 166
Msa0454550 MtrunA17_Chr3g0085161 26.154 780 484 30 177 913 24 754 1.46e-41 165
Msa0454550 MtrunA17_Chr4g0010251 27.114 745 429 31 217 899 197 889 1.71e-41 165
Msa0454550 MtrunA17_Chr3g0091041 31.933 357 199 15 181 527 165 487 1.83e-41 160
Msa0454550 MtrunA17_Chr7g0257191 24.017 712 458 24 27 701 23 688 1.88e-41 164
Msa0454550 MtrunA17_Chr5g0414231 25.285 526 350 12 11 525 3 496 2.45e-41 159
Msa0454550 MtrunA17_Chr8g0337891 24.242 660 439 22 32 674 28 643 4.96e-41 162
Msa0454550 MtrunA17_Chr8g0355411 23.622 889 546 32 19 871 17 808 5.06e-41 163
Msa0454550 MtrunA17_Chr3g0082891 26.367 713 438 29 167 830 141 815 7.73e-41 162
Msa0454550 MtrunA17_Chr6g0484551 26.437 522 293 19 181 673 167 626 1.44e-40 161
Msa0454550 MtrunA17_Chr7g0248431 26.316 570 361 19 27 577 23 552 2.09e-40 158
Msa0454550 MtrunA17_Chr3g0085091 27.466 801 456 36 181 913 153 896 4.48e-40 160
Msa0454550 MtrunA17_Chr3g0078361 27.802 464 278 15 215 644 1 441 9.00e-40 153
Msa0454550 MtrunA17_Chr1g0159111 24.758 723 467 25 209 885 174 865 1.27e-39 159
Msa0454550 MtrunA17_Chr3g0086741 27.393 606 388 22 174 755 170 747 2.15e-39 158
Msa0454550 MtrunA17_Chr3g0083721 28.074 488 304 16 206 679 145 599 2.99e-39 157
Msa0454550 MtrunA17_Chr6g0468101 25.496 655 425 24 11 650 3 609 3.48e-39 158
Msa0454550 MtrunA17_Chr3g0081201 43.269 208 116 2 723 929 2 208 3.55e-39 145
Msa0454550 MtrunA17_Chr3g0085131 24.781 799 460 27 181 896 150 890 5.11e-39 157
Msa0454550 MtrunA17_Chr3g0091011 26.485 808 464 36 164 910 131 869 6.97e-39 157
Msa0454550 MtrunA17_Chr8g0338261 24.961 641 419 24 32 653 28 625 1.11e-38 156
Msa0454550 MtrunA17_Chr3g0085111 25.875 800 469 31 180 913 148 889 1.70e-38 155
Msa0454550 MtrunA17_Chr3g0113781 25.346 722 460 28 234 914 1 684 7.13e-38 152
Msa0454550 MtrunA17_Chr8g0338361 24.494 494 339 17 172 652 17 489 8.77e-38 149
Msa0454550 MtrunA17_Chr4g0048471 28.346 508 304 21 176 661 21 490 9.71e-38 152
Msa0454550 MtrunA17_Chr8g0338251 24.797 738 454 29 32 744 28 689 1.93e-37 151
Msa0454550 MtrunA17_Chr3g0089431 30.794 315 185 10 181 482 169 463 2.02e-37 147
Msa0454550 MtrunA17_Chr3g0085521 23.983 959 549 41 46 913 42 911 2.03e-37 152
Msa0454550 MtrunA17_Chr3g0089931 25.667 487 287 16 59 525 55 486 3.26e-37 147
Msa0454550 MtrunA17_Chr8g0356251 25.722 762 441 34 209 882 202 926 7.65e-37 150
Msa0454550 MtrunA17_Chr3g0080701 39.381 226 126 4 1 224 1 217 7.77e-37 139
Msa0454550 MtrunA17_Chr7g0218941 23.312 948 577 34 32 895 28 909 1.13e-36 149
Msa0454550 MtrunA17_Chr6g0456121 26.614 511 317 18 182 673 150 621 1.38e-36 149
Msa0454550 MtrunA17_Chr6g0478721 24.462 744 469 24 194 885 74 776 2.28e-36 148
Msa0454550 MtrunA17_Chr4g0048421 24.101 751 482 24 209 919 173 875 3.78e-36 147
Msa0454550 MtrunA17_Chr5g0415511 24.319 551 368 15 173 694 154 684 3.78e-36 147
Msa0454550 MtrunA17_Chr3g0084811 25.819 763 439 28 206 894 347 1056 1.37e-35 146
Msa0454550 MtrunA17_Chr8g0351821 26.819 481 296 18 10 477 2 439 2.75e-35 140
Msa0454550 MtrunA17_Chr3g0085751 24.229 908 567 37 46 901 39 877 3.74e-35 145
Msa0454550 MtrunA17_Chr5g0415551 27.387 555 337 16 181 709 27 541 5.22e-35 143
Msa0454550 MtrunA17_Chr3g0084061 26.065 798 506 30 161 910 135 896 6.12e-35 144
Msa0454550 MtrunA17_Chr3g0091971 25.777 772 437 32 146 858 113 807 1.21e-34 143
Msa0454550 MtrunA17_Chr1g0168901 27.509 538 292 20 206 693 168 657 2.29e-34 142
Msa0454550 MtrunA17_Chr3g0080871 25.830 542 335 16 183 683 156 671 3.18e-34 142
Msa0454550 MtrunA17_Chr4g0071021 24.797 492 295 14 11 486 3 435 4.27e-34 136
Msa0454550 MtrunA17_Chr7g0257551 27.628 333 214 7 180 493 86 410 1.76e-33 134
Msa0454550 MtrunA17_Chr3g0083591 26.372 565 343 18 203 720 155 693 5.22e-33 138
Msa0454550 MtrunA17_Chr5g0413811 25.825 697 454 25 241 916 1 655 8.71e-33 135
Msa0454550 MtrunA17_Chr5g0417301 23.935 681 393 19 11 669 3 580 2.63e-32 133
Msa0454550 MtrunA17_Chr5g0430331 26.850 473 286 15 11 469 3 429 6.10e-32 130
Msa0454550 MtrunA17_Chr5g0430901 28.256 407 243 13 11 403 3 374 6.40e-32 134
Msa0454550 MtrunA17_Chr3g0101171 60.638 94 37 0 444 537 5 98 8.88e-32 120
Msa0454550 MtrunA17_Chr5g0414291 27.470 415 244 16 43 430 28 412 2.75e-31 127
Msa0454550 MtrunA17_Chr3g0085171 24.439 802 471 32 183 910 138 878 1.31e-30 130
Msa0454550 MtrunA17_Chr1g0197181 27.432 514 305 15 446 902 3 505 2.35e-30 127
Msa0454550 MtrunA17_Chr1g0160871 41.667 156 79 2 650 798 1 151 1.63e-29 115
Msa0454550 MtrunA17_Chr3g0100841 58.242 91 37 1 16 105 8 98 1.92e-29 113
Msa0454550 MtrunA17_Chr2g0309151 26.652 454 292 17 241 674 1 433 7.71e-29 122
Msa0454550 MtrunA17_Chr7g0248411 27.811 338 205 12 80 400 5 320 8.50e-29 118
Msa0454550 MtrunA17_Chr6g0469991 34.454 238 137 10 172 401 142 368 1.26e-28 119
Msa0454550 MtrunA17_Chr1g0189301 44.928 138 69 3 75 212 3 133 1.39e-28 111
Msa0454550 MtrunA17_Chr4g0010491 30.743 296 173 8 175 460 151 424 4.09e-28 118
Msa0454550 MtrunA17_Chr2g0299141 28.272 382 227 12 319 673 13 374 4.54e-28 118
Msa0454550 MtrunA17_Chr5g0410161 26.322 832 466 37 130 885 255 1015 6.05e-28 122
Msa0454550 MtrunA17_Chr3g0082321 29.167 360 197 9 342 673 271 600 7.85e-28 120
Msa0454550 MtrunA17_Chr8g0352211 24.427 655 438 22 34 673 1030 1642 3.26e-27 120
Msa0454550 MtrunA17_Chr3g0085701 32.039 309 180 9 181 478 150 439 3.42e-27 119
Msa0454550 MtrunA17_Chr3g0107181 26.139 505 329 19 187 673 134 612 4.61e-27 119
Msa0454550 MtrunA17_Chr3g0101161 38.579 197 107 4 738 930 3 189 6.22e-26 105
Msa0454550 MtrunA17_Chr5g0417251 24.481 674 435 28 257 895 1 635 1.17e-25 113
Msa0454550 MtrunA17_Chr8g0355071 28.102 274 183 8 231 501 29 291 1.23e-25 108
Msa0454550 MtrunA17_Chr3g0087301 25.349 430 248 17 59 448 45 441 1.35e-25 114
Msa0454550 MtrunA17_Chr2g0308491 29.389 262 169 7 202 460 10 258 3.67e-25 105
Msa0454550 MtrunA17_Chr8g0360991 26.820 522 326 18 205 701 169 659 1.49e-24 111
Msa0454550 MtrunA17_Chr7g0229751 25.794 504 331 18 187 673 97 574 2.88e-24 109
Msa0454550 MtrunA17_Chr2g0299131 31.878 229 136 6 183 401 2 220 2.90e-24 102
Msa0454550 MtrunA17_Chr5g0410301 25.190 790 429 34 183 885 139 853 1.21e-23 107
Msa0454550 MtrunA17_Chr3g0086071 29.314 481 272 21 431 858 11 476 1.24e-23 107
Msa0454550 MtrunA17_Chr3g0096821 25.737 509 331 19 187 673 140 623 1.39e-23 107
Msa0454550 MtrunA17_Chr3g0083681 24.949 493 313 18 206 679 179 633 2.71e-23 107
Msa0454550 MtrunA17_Chr5g0410401 24.894 707 402 33 183 827 17 656 1.92e-22 103
Msa0454550 MtrunA17_Chr5g0415491 28.636 220 144 5 172 386 10 221 2.40e-22 96.7
Msa0454550 MtrunA17_Chr3g0091961 25.537 419 249 12 341 721 4 397 3.41e-22 100
Msa0454550 MtrunA17_Chr3g0083641 23.438 576 335 18 163 680 129 656 3.44e-22 103
Msa0454550 MtrunA17_Chr1g0189311 60.000 80 30 2 215 292 1 80 3.70e-22 91.3
Msa0454550 MtrunA17_Chr5g0410481 25.578 778 412 35 194 885 153 849 4.04e-22 103
Msa0454550 MtrunA17_Chr1g0189261 48.485 99 43 1 1 99 1 91 4.36e-22 91.7
Msa0454550 MtrunA17_Chr7g0229721 24.684 474 320 16 214 673 172 622 4.55e-22 102
Msa0454550 MtrunA17_Chr6g0468111 25.243 515 293 17 172 674 33 467 6.87e-22 100
Msa0454550 MtrunA17_Chr6g0468401 25.069 363 231 13 10 364 2 331 2.41e-21 96.7
Msa0454550 MtrunA17_Chr3g0105571 25.417 480 315 17 209 671 119 572 5.75e-21 98.2
Msa0454550 MtrunA17_Chr5g0443761 25.098 510 297 19 209 676 33 499 9.45e-21 99.0
Msa0454550 MtrunA17_Chr3g0096721 25.572 481 317 17 209 673 167 622 1.33e-20 98.2
Msa0454550 MtrunA17_Chr1g0169941 28.814 236 153 6 272 502 31 256 1.50e-20 94.4
Msa0454550 MtrunA17_Chr6g0470001 27.699 491 286 21 434 886 3 462 1.81e-20 97.4
Msa0454550 MtrunA17_Chr3g0085721 28.125 256 168 6 154 403 112 357 2.90e-20 94.0
Msa0454550 MtrunA17_Chr2g0282981 25.381 394 241 13 27 403 26 383 3.67e-20 94.7
Msa0454550 MtrunA17_Chr8g0338681 28.125 256 161 8 241 489 1 240 4.32e-20 90.9
Msa0454550 MtrunA17_Chr3g0085431 26.560 561 319 25 386 913 2 502 7.69e-20 94.4
Msa0454550 MtrunA17_Chr8g0338861 26.975 367 233 14 320 673 7 351 2.32e-19 93.6
Msa0454550 MtrunA17_Chr5g0410351 25.042 595 367 21 156 721 124 668 4.08e-19 93.6
Msa0454550 MtrunA17_Chr5g0416571 24.324 370 203 12 11 364 3 311 8.24e-19 89.0
Msa0454550 MtrunA17_Chr3g0108811 24.070 511 336 16 187 673 157 639 8.58e-19 92.8
Msa0454550 MtrunA17_Chr8g0392521 28.125 192 126 5 181 364 131 318 8.71e-19 89.0
Msa0454550 MtrunA17_Chr3g0105521 25.100 498 317 19 187 664 30 491 2.25e-18 91.3
Msa0454550 MtrunA17_Chr3g0108821 25.437 515 335 18 209 704 168 652 2.33e-18 91.3
Msa0454550 MtrunA17_Chr5g0410261 25.487 565 320 22 379 881 356 881 3.39e-18 90.5
Msa0454550 MtrunA17_Chr3g0082381 26.235 324 190 14 42 350 43 332 4.71e-18 86.7
Msa0454550 MtrunA17_Chr1g0197191 28.405 257 151 6 160 404 93 328 5.29e-18 86.7
Msa0454550 MtrunA17_Chr6g0468141 31.250 240 119 9 181 411 55 257 9.35e-18 84.3
Msa0454550 MtrunA17_Chr3g0105551 25.210 476 307 18 209 664 165 611 2.03e-17 88.2
Msa0454550 MtrunA17_Chr6g0468201 26.122 490 283 19 435 885 4 453 2.06e-17 87.4
Msa0454550 MtrunA17_Chr2g0282891 24.455 413 203 17 319 687 10 357 2.91e-17 84.7
Msa0454550 MtrunA17_Chr7g0223931 24.686 478 318 16 215 673 1 455 3.64e-17 86.7
Msa0454550 MtrunA17_Chr6g0468361 24.675 462 292 17 435 866 4 439 1.02e-16 84.3
Msa0454550 MtrunA17_Chr5g0444291 45.055 91 28 3 298 367 8 97 1.54e-16 76.3
Msa0454550 MtrunA17_Chr7g0221131 25.600 500 314 20 209 687 241 703 2.36e-16 84.3
Msa0454550 MtrunA17_Chr1g0189341 53.165 79 35 1 818 896 1 77 3.57e-16 75.9
Msa0454550 MtrunA17_Chr3g0082371 27.336 289 170 11 394 673 1 258 3.79e-16 82.4
Msa0454550 MtrunA17_Chr1g0189511 28.571 308 154 13 374 673 6 255 4.50e-16 79.7
Msa0454550 MtrunA17_Chr8g0342131 25.926 567 332 26 206 753 216 713 5.45e-16 83.2
Msa0454550 MtrunA17_Chr7g0255111 24.423 520 338 24 175 670 142 630 5.70e-16 83.6
Msa0454550 MtrunA17_Chr7g0221071 24.254 503 319 20 209 687 96 560 7.55e-16 82.0
Msa0454550 MtrunA17_Chr3g0107211 24.898 490 318 21 209 673 169 633 7.60e-16 82.8
Msa0454550 MtrunA17_Chr7g0255401 23.077 520 331 21 176 652 80 573 8.07e-16 82.8
Msa0454550 MtrunA17_Chr3g0091121 26.067 445 249 23 418 831 8 403 1.97e-15 80.9
Msa0454550 MtrunA17_Chr5g0402671 23.823 722 411 35 183 840 160 806 2.02e-15 81.3
Msa0454550 MtrunA17_Chr8g0374301 23.804 794 506 37 42 802 34 761 2.68e-15 80.9
Msa0454550 MtrunA17_Chr3g0108211 25.714 315 211 10 215 524 1 297 3.73e-15 79.0
Msa0454550 MtrunA17_Chr3g0097031 23.800 479 318 17 209 664 117 571 3.84e-15 80.1
Msa0454550 MtrunA17_Chr3g0091851 23.241 469 320 16 220 673 120 563 3.91e-15 80.5
Msa0454550 MtrunA17_Chr7g0257251 31.677 161 99 4 347 502 10 164 4.67e-15 74.3
Msa0454550 MtrunA17_Chr1g0174511 23.194 526 349 19 210 705 175 675 6.17e-15 80.1
Msa0454550 MtrunA17_Chr3g0100261 24.220 545 339 21 190 701 156 659 6.43e-15 79.7
Msa0454550 MtrunA17_Chr3g0100981 36.296 135 84 1 793 927 3 135 6.72e-15 72.8
Msa0454550 MtrunA17_Chr3g0100771 36.296 135 84 1 793 927 3 135 6.72e-15 72.8
Msa0454550 MtrunA17_Chr5g0402771 27.989 368 211 21 183 527 158 494 1.33e-14 78.6
Msa0454550 MtrunA17_Chr6g0455221 23.180 673 370 30 193 833 198 755 3.07e-14 77.8
Msa0454550 MtrunA17_Chr6g0478771 29.720 286 176 12 170 451 171 435 3.44e-14 77.4
Msa0454550 MtrunA17_Chr2g0299841 27.124 306 186 11 169 463 216 495 3.83e-14 77.4
Msa0454550 MtrunA17_Chr3g0105481 25.284 352 225 13 187 525 96 422 4.32e-14 77.4
Msa0454550 MtrunA17_Chr3g0101411 40.698 86 43 1 1 86 1 78 5.09e-14 68.2
Msa0454550 MtrunA17_Chr3g0105621 25.836 329 207 12 209 525 119 422 9.42e-14 75.1
Msa0454550 MtrunA17_Chr1g0153981 26.165 279 183 10 197 472 193 451 1.08e-13 75.5
Msa0454550 MtrunA17_Chr3g0100691 38.060 134 81 1 793 926 3 134 1.14e-13 68.9
Msa0454550 MtrunA17_Chr3g0085421 26.316 152 101 3 186 332 97 242 1.39e-13 71.6
Msa0454550 MtrunA17_Chr3g0108101 28.782 271 174 9 215 480 1 257 2.22e-13 71.6
Msa0454550 MtrunA17_Chr7g0234891 30.196 255 151 10 209 456 129 363 2.38e-13 73.2
Msa0454550 MtrunA17_Chr2g0313461 23.711 485 313 21 209 673 174 621 2.80e-13 74.7
Msa0454550 MtrunA17_Chr4g0009241 31.077 325 179 20 141 451 683 976 3.55e-13 74.3
Msa0454550 MtrunA17_Chr1g0189331 40.741 108 59 2 697 800 3 109 3.67e-13 67.0
Msa0454550 MtrunA17_Chr7g0220981 27.241 290 189 12 205 488 51 324 3.73e-13 72.8
Msa0454550 MtrunA17_Chr7g0255681 28.309 272 167 9 187 451 190 440 5.40e-13 73.9
Msa0454550 MtrunA17_Chr4g0009171 28.374 289 172 13 141 418 141 405 7.78e-13 73.2
Msa0454550 MtrunA17_Chr5g0414171 28.283 198 132 4 302 499 210 397 1.45e-12 70.9
Msa0454550 MtrunA17_Chr3g0091861 24.000 525 337 23 185 680 84 575 1.70e-12 72.0
Msa0454550 MtrunA17_Chr6g0454931 24.200 500 307 18 187 673 252 692 1.97e-12 71.6
Msa0454550 MtrunA17_Chr1g0172171 25.692 253 169 9 210 460 175 410 3.33e-12 70.5
Msa0454550 MtrunA17_Chr4g0020411 37.500 112 65 2 344 455 43 149 3.33e-12 65.5
Msa0454550 MtrunA17_Chr4g0018431 22.843 788 448 32 175 901 187 875 4.11e-12 70.5
Msa0454550 MtrunA17_Chr7g0257261 24.490 196 127 4 64 250 55 238 7.45e-12 67.0
Msa0454550 MtrunA17_Chr3g0108151 29.000 200 121 7 209 400 169 355 1.07e-11 69.3
Msa0454550 MtrunA17_Chr5g0402721 24.110 365 239 17 183 535 145 483 1.13e-11 68.9
Msa0454550 MtrunA17_Chr2g0313591 24.063 507 318 21 193 673 156 621 2.61e-11 68.2
Msa0454550 MtrunA17_Chr1g0163981 22.857 525 334 19 180 673 135 619 2.64e-11 67.8
Msa0454550 MtrunA17_Chr2g0313491 22.290 489 329 18 209 680 174 628 3.06e-11 67.8
Msa0454550 MtrunA17_Chr8g0351811 28.391 317 190 15 618 910 92 395 3.58e-11 67.4
Msa0454550 MtrunA17_Chr5g0403291 27.126 247 141 14 183 418 34 252 4.87e-11 66.6
Msa0454550 MtrunA17_Chr6g0454851 23.824 638 386 26 187 802 278 837 5.01e-11 67.0
Msa0454550 MtrunA17_Chr5g0414911 25.000 496 302 20 205 673 177 629 6.07e-11 67.0
Msa0454550 MtrunA17_Chr3g0081941 26.126 222 146 7 200 419 156 361 6.30e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0454550 AT3G07040.1 29.958 948 609 19 21 947 13 926 5.76e-131 419
Msa0454550 AT1G58400.3 26.586 914 599 28 1 888 1 868 1.52e-78 276
Msa0454550 AT1G58400.2 26.586 914 599 28 1 888 1 868 1.52e-78 276
Msa0454550 AT1G58390.1 26.584 963 598 33 12 928 4 903 1.47e-77 273
Msa0454550 AT1G58390.2 26.584 963 598 33 12 928 4 903 1.47e-77 273
Msa0454550 AT3G46710.1 30.045 882 520 33 25 877 17 830 1.36e-75 266
Msa0454550 AT5G43470.3 25.938 960 627 25 1 931 1 905 6.05e-75 265
Msa0454550 AT5G43470.2 25.938 960 627 25 1 931 1 905 6.05e-75 265
Msa0454550 AT5G43470.4 25.938 960 627 25 1 931 1 905 6.05e-75 265
Msa0454550 AT5G43470.1 25.938 960 627 25 1 931 1 905 6.05e-75 265
Msa0454550 AT1G58400.1 25.821 914 596 27 1 888 1 858 2.57e-73 261
Msa0454550 AT5G35450.2 25.393 953 622 30 1 927 1 890 1.19e-72 259
Msa0454550 AT5G35450.1 25.393 953 622 30 1 927 1 890 1.19e-72 259
Msa0454550 AT5G48620.6 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT5G48620.1 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT5G48620.4 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT5G48620.2 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT5G48620.3 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT5G48620.5 25.577 954 638 25 1 931 1 905 4.18e-72 257
Msa0454550 AT3G46530.1 28.370 853 542 27 25 870 17 807 7.11e-72 255
Msa0454550 AT1G53350.1 25.572 962 626 30 1 931 1 903 4.91e-71 254
Msa0454550 AT1G59780.2 25.184 949 618 28 1 927 1 879 1.24e-70 253
Msa0454550 AT1G59780.1 25.184 949 618 28 1 927 6 884 1.84e-70 253
Msa0454550 AT3G46730.1 28.904 903 536 29 1 875 1 825 2.11e-70 251
Msa0454550 AT1G58410.1 26.667 945 613 33 12 927 2 895 4.11e-70 251
Msa0454550 AT1G58410.4 26.667 945 613 33 12 927 2 895 4.11e-70 251
Msa0454550 AT1G58410.2 26.667 945 613 33 12 927 2 895 4.11e-70 251
Msa0454550 AT1G50180.1 29.953 641 386 20 34 652 26 625 3.09e-69 248
Msa0454550 AT1G59218.1 25.135 923 583 28 12 885 4 867 7.63e-66 241
Msa0454550 AT1G59218.2 25.135 923 583 28 12 885 4 867 7.63e-66 241
Msa0454550 AT1G59218.3 25.135 923 583 28 12 885 4 867 7.63e-66 241
Msa0454550 AT1G58848.1 25.135 923 583 28 12 885 4 867 7.63e-66 241
Msa0454550 AT1G58848.2 25.135 923 583 28 12 885 4 867 7.63e-66 241
Msa0454550 AT1G59124.2 25.000 916 585 29 12 885 4 859 1.24e-61 228
Msa0454550 AT1G58807.1 25.000 916 585 29 12 885 4 859 1.24e-61 228
Msa0454550 AT1G59620.2 25.618 769 513 17 173 927 14 737 2.33e-61 223
Msa0454550 AT1G59124.1 25.055 906 577 29 12 875 4 849 4.98e-61 224
Msa0454550 AT1G58807.2 25.055 906 577 29 12 875 4 849 4.98e-61 224
Msa0454550 AT3G50950.2 25.250 899 548 32 11 845 3 841 3.16e-59 219
Msa0454550 AT3G50950.1 25.250 899 548 32 11 845 3 841 3.16e-59 219
Msa0454550 AT1G10920.1 27.801 723 465 24 150 843 4 698 4.88e-59 216
Msa0454550 AT1G10920.2 27.801 723 465 24 150 843 4 698 4.88e-59 216
Msa0454550 AT1G10920.4 27.801 723 465 24 150 843 4 698 4.88e-59 216
Msa0454550 AT1G58602.2 24.374 919 593 26 12 885 4 865 2.32e-57 216
Msa0454550 AT1G58602.1 24.374 919 593 26 12 885 4 865 2.32e-57 216
Msa0454550 AT1G58410.3 25.106 940 602 33 12 927 2 863 6.79e-57 212
Msa0454550 AT3G14470.1 26.911 654 403 22 181 793 167 786 8.56e-49 189
Msa0454550 AT3G14470.2 26.911 654 403 22 181 793 167 786 8.56e-49 189
Msa0454550 AT3G14460.1 27.158 556 335 21 175 701 157 671 2.83e-38 155
Msa0454550 AT1G10920.5 27.273 550 350 20 322 843 1 528 7.65e-36 144
Msa0454550 AT1G10920.3 27.273 550 350 20 322 843 1 528 7.65e-36 144
Msa0454550 AT4G26090.1 24.200 781 474 29 145 901 118 804 1.13e-32 137
Msa0454550 AT1G12220.3 25.893 560 347 20 155 673 8 540 1.76e-32 136
Msa0454550 AT1G12280.1 25.926 486 291 15 209 673 178 615 1.81e-32 136
Msa0454550 AT1G12220.1 25.893 560 347 20 155 673 129 661 3.18e-32 135
Msa0454550 AT1G12220.2 25.893 560 347 20 155 673 129 661 3.18e-32 135
Msa0454550 AT1G12210.3 25.385 520 350 14 183 686 112 609 1.17e-31 134
Msa0454550 AT1G12210.2 25.385 520 350 14 183 686 112 609 1.17e-31 134
Msa0454550 AT1G12210.1 25.385 520 350 14 183 686 154 651 1.27e-31 134
Msa0454550 AT4G10780.1 25.872 545 324 21 173 673 128 636 5.97e-30 128
Msa0454550 AT4G10780.2 25.872 545 324 21 173 673 128 636 6.47e-30 128
Msa0454550 AT4G27220.1 26.295 502 296 22 210 678 137 597 2.38e-29 126
Msa0454550 AT4G27220.2 26.295 502 296 22 210 678 145 605 3.12e-29 126
Msa0454550 AT5G47250.1 26.592 534 340 21 204 729 173 662 4.18e-29 125
Msa0454550 AT1G51480.1 25.786 477 291 17 205 652 171 613 6.62e-28 122
Msa0454550 AT1G15890.1 26.800 500 296 20 187 655 156 616 1.35e-27 120
Msa0454550 AT5G05400.1 22.807 969 569 41 6 910 7 860 1.48e-27 120
Msa0454550 AT1G15890.2 26.501 483 287 19 204 655 11 456 1.57e-27 120
Msa0454550 AT5G63020.1 25.103 486 322 17 205 673 172 632 2.14e-27 120
Msa0454550 AT5G05400.2 23.879 758 447 31 209 910 8 691 2.39e-26 116
Msa0454550 AT5G05400.3 23.879 758 447 31 209 910 8 691 2.39e-26 116
Msa0454550 AT4G27190.1 25.219 571 350 20 198 725 150 686 3.28e-26 116
Msa0454550 AT5G43740.1 25.773 485 291 17 205 657 169 616 4.89e-26 115
Msa0454550 AT5G43740.2 25.773 485 291 17 205 657 169 616 4.89e-26 115
Msa0454550 AT5G43730.4 25.776 644 394 26 205 805 170 772 2.52e-25 113
Msa0454550 AT5G43730.1 25.776 644 394 26 205 805 170 772 2.52e-25 113
Msa0454550 AT5G43730.3 25.776 644 394 26 205 805 170 772 2.52e-25 113
Msa0454550 AT5G43730.2 25.776 644 394 26 205 805 170 772 2.52e-25 113
Msa0454550 AT5G43730.5 25.776 644 394 26 205 805 170 772 2.52e-25 113
Msa0454550 AT1G61180.1 24.635 479 291 19 209 655 174 614 5.34e-25 112
Msa0454550 AT1G61180.2 24.635 479 291 19 209 655 174 614 6.82e-25 112
Msa0454550 AT1G61310.1 24.116 481 302 18 209 655 176 627 2.05e-23 107
Msa0454550 AT1G61190.1 24.211 475 295 18 209 652 175 615 4.25e-23 106
Msa0454550 AT1G61190.2 24.211 475 295 18 209 652 175 615 4.78e-23 106
Msa0454550 AT1G61190.3 24.211 475 295 18 209 652 175 615 4.78e-23 106
Msa0454550 AT1G12290.1 26.261 476 295 16 209 668 177 612 1.38e-22 104
Msa0454550 AT1G12290.4 26.261 476 295 16 209 668 135 570 1.75e-22 104
Msa0454550 AT1G12290.3 26.261 476 295 16 209 668 135 570 1.75e-22 104
Msa0454550 AT1G12290.2 26.261 476 295 16 209 668 135 570 1.75e-22 104
Msa0454550 AT1G63350.1 22.632 760 455 26 183 885 150 833 2.01e-22 104
Msa0454550 AT1G63350.4 22.869 739 443 25 183 885 150 797 3.23e-22 103
Msa0454550 AT1G63350.3 22.632 760 455 26 183 885 150 833 3.51e-22 103
Msa0454550 AT1G63350.2 22.632 760 455 26 183 885 150 833 3.51e-22 103
Msa0454550 AT1G61300.1 24.752 505 307 22 168 638 21 486 1.03e-21 101
Msa0454550 AT1G12280.2 24.536 485 266 18 209 673 140 544 1.11e-21 102
Msa0454550 AT5G47260.1 23.077 455 316 14 210 655 172 601 2.59e-21 100
Msa0454550 AT1G61190.4 24.067 536 322 21 209 729 175 640 4.03e-21 100
Msa0454550 AT1G61300.2 27.356 329 201 15 168 480 21 327 1.21e-19 95.1
Msa0454550 AT1G62630.1 25.095 526 330 22 220 726 185 665 2.14e-18 91.3
Msa0454550 AT1G63360.2 24.035 570 357 23 237 780 168 687 3.49e-16 84.3
Msa0454550 AT1G63360.1 24.035 570 357 23 237 780 203 722 5.54e-16 83.6
Msa0454550 AT5G66910.1 23.824 638 381 29 146 733 136 718 6.63e-14 76.6
Msa0454550 AT1G27170.1 22.436 780 492 31 170 888 174 901 1.67e-12 72.4
Msa0454550 AT1G27170.2 22.436 780 492 31 170 888 174 901 1.78e-12 72.4
Msa0454550 AT5G66900.2 22.630 654 400 28 186 802 216 800 1.11e-11 69.7
Msa0454550 AT5G66900.1 22.630 654 400 28 186 802 168 752 1.11e-11 69.3
Msa0454550 AT5G36930.3 27.338 278 164 8 184 451 186 435 2.57e-11 68.6
Msa0454550 AT5G36930.2 27.338 278 164 8 184 451 189 438 2.71e-11 68.6
Msa0454550 AT5G36930.4 27.338 278 164 8 184 451 186 435 2.80e-11 68.6
Msa0454550 AT5G36930.1 27.338 278 164 8 184 451 186 435 2.80e-11 68.6
Msa0454550 AT1G27180.7 27.675 271 172 10 186 451 24 275 5.80e-11 67.4
Msa0454550 AT1G27180.6 27.675 271 172 10 186 451 24 275 5.80e-11 67.4
Msa0454550 AT1G27180.4 27.675 271 172 10 186 451 24 275 5.80e-11 67.4
Msa0454550 AT1G27180.5 27.675 271 172 10 186 451 198 449 7.06e-11 67.0
Msa0454550 AT1G27180.8 27.675 271 172 10 186 451 198 449 7.06e-11 67.0
Msa0454550 AT1G27180.2 27.675 271 172 10 186 451 200 451 7.44e-11 67.0
Msa0454550 AT1G27180.1 27.675 271 172 10 186 451 362 613 7.50e-11 67.0
Msa0454550 AT1G27180.3 27.675 271 172 10 186 451 200 451 7.61e-11 67.0

Find 176 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTAGAGACCTTAGATTTA+AGG 0.148310 3_3:+45939954 Msa0454550:CDS
TTCATGTCTGCAACTTCTTT+TGG 0.153822 3_3:-45938123 None:intergenic
AGTTGGGGAGGTTTCCATTT+TGG 0.190502 3_3:+45940365 Msa0454550:CDS
CCATTTGCTTCCACTATTAA+AGG 0.206014 3_3:+45938074 Msa0454550:CDS
ATTGGTTAATTTGTTGATAA+AGG 0.222520 3_3:+45938602 Msa0454550:CDS
GTCCTTATTTCAAAGTAAAA+AGG 0.236083 3_3:-45941276 Msa0454560:intron
AAGTTTGGAATGAACAATTA+TGG 0.250286 3_3:+45938913 Msa0454550:CDS
CTTTGTTATAACATGTATAC+TGG 0.252568 3_3:-45939294 None:intergenic
TGAAGCTTGTTAATCTCTTT+TGG 0.253017 3_3:-45939998 None:intergenic
TCATCTTGTTTGATGAAGTT+TGG 0.259397 3_3:+45938898 Msa0454550:CDS
TGAGTTTCTCCAATGTAAAA+TGG 0.259403 3_3:-45938549 None:intergenic
GAACAATTATGGAATGATAT+TGG 0.268354 3_3:+45938924 Msa0454550:CDS
AAACAATGCTTCTTATACTT+TGG 0.280402 3_3:+45939356 Msa0454550:CDS
CTCTCTAAGGTTGTTGAATA+TGG 0.294658 3_3:-45938523 None:intergenic
ATACAAGAACCAACCTTCTA+TGG 0.302290 3_3:-45939508 None:intergenic
CCACTTGCAATTGTGGCTAT+TGG 0.302749 3_3:+45939185 Msa0454550:CDS
AATTTGAAATCCATCAAAAT+TGG 0.306306 3_3:+45940583 Msa0454550:CDS
CTTCAGAAGCTTCGCCTTGT+AGG 0.309344 3_3:+45940340 Msa0454550:CDS
CAACTGATGGAGGTGCCTTC+TGG 0.310571 3_3:+45940655 Msa0454550:CDS
CCACTTCGCGTAGCGTTTGT+AGG 0.315678 3_3:-45940108 None:intergenic
TCAAAGCAGACACTGAAATA+TGG 0.315956 3_3:-45941106 Msa0454560:three_prime_UTR
ATGAAGTAAATATCTTTCTT+TGG 0.323251 3_3:-45939222 None:intergenic
GATACATTCATAAGATTATC+AGG 0.326976 3_3:-45939131 None:intergenic
CATAGTTTGCCTTAAATCTA+AGG 0.330264 3_3:-45939963 None:intergenic
AATGATCCTTGATAAAATTC+AGG 0.330564 3_3:+45939589 Msa0454550:CDS
TGGGACACCTCTTATCATAT+TGG 0.334670 3_3:-45938103 None:intergenic
ACGTCTAAAGGTGTTGGATA+TGG 0.337399 3_3:+45940049 Msa0454550:CDS
TGTAGCTCTCTAATCCAAAA+TGG 0.341274 3_3:-45940379 None:intergenic
CAAAACATTTACAAACAAAC+AGG 0.342463 3_3:+45938792 Msa0454550:CDS
GCTAGAAGTTGTCATGTTCA+TGG 0.344809 3_3:+45939554 Msa0454550:CDS
CAAGTGTTTCATCTCATATA+TGG 0.347478 3_3:-45940242 None:intergenic
ACAAATAGCTTACAAAATTC+AGG 0.352227 3_3:+45938386 Msa0454550:CDS
TGTAAAATGGAGCCTCTCTA+AGG 0.359289 3_3:-45938536 None:intergenic
CTTAGATTTAAGGCAAACTA+TGG 0.360317 3_3:+45939964 Msa0454550:CDS
CTTCGCCTTGTAGGGAAGTT+GGG 0.360692 3_3:+45940349 Msa0454550:CDS
AAGCATTGTTTGAGATTGTA+AGG 0.360695 3_3:-45939344 None:intergenic
TCCTTGTGAAATTTCTGAAA+TGG 0.361112 3_3:+45938821 Msa0454550:CDS
TTGGTTAATTTGTTGATAAA+GGG 0.363841 3_3:+45938603 Msa0454550:CDS
CCCATTGTTTAATTAGTCTC+AGG 0.370686 3_3:-45939409 None:intergenic
AAGGCATTCTTTGACTTGAA+TGG 0.371851 3_3:+45939101 Msa0454550:CDS
CAAAGCCCCAAGGGATGAAT+TGG 0.374116 3_3:+45938584 Msa0454550:CDS
GTAGAGAAGGTTCCATTTGT+AGG 0.377320 3_3:+45940778 Msa0454550:CDS
GTGTCAAAGATGATTTGATT+TGG 0.384640 3_3:-45938467 None:intergenic
TAACAGAGTTGATCCATAGA+AGG 0.384686 3_3:+45939495 Msa0454550:CDS
AAAGATATTTACTTCATGAA+TGG 0.394415 3_3:+45939228 Msa0454550:CDS
TGAAAATTTGAGTGTAGAGT+TGG 0.395045 3_3:+45939262 Msa0454550:CDS
TTAACAAGCTTCAAAAGTTA+AGG 0.399812 3_3:+45940008 Msa0454550:CDS
TTTAGTAATTTGAACTTTGA+AGG 0.401879 3_3:-45939797 None:intergenic
TAAAGCTTAAATATCTCAAA+TGG 0.402586 3_3:-45939883 None:intergenic
TTATACTTTGGAATATATCC+TGG 0.403117 3_3:+45939368 Msa0454550:CDS
CGTATTGTCTTCTTCAGCTT+CGG 0.406189 3_3:-45938196 None:intergenic
ATCTCGGTGGTTGGGATGGG+AGG 0.415246 3_3:+45938645 Msa0454550:CDS
ATCAGTTGCTTCCGTTAGCT+CGG 0.416517 3_3:+45938049 Msa0454550:CDS
AAGATATTTACTTCATGAAT+GGG 0.419036 3_3:+45939229 Msa0454550:CDS
AGGAATCTCCCAGGATCTAT+TGG 0.420832 3_3:+45939920 Msa0454550:CDS
GCGTTAACTTCATAGTTTCC+AGG 0.421805 3_3:-45939386 None:intergenic
AAATTAACCAATTCATCCCT+TGG 0.426974 3_3:-45938591 None:intergenic
ATACTAAGGTATAACAAATT+CGG 0.429770 3_3:-45940472 None:intergenic
TGTCATCTCGGTGGTTGGGA+TGG 0.436390 3_3:+45938641 Msa0454550:CDS
CGGTCAACTATTCCTACAAA+TGG 0.438093 3_3:-45940790 Msa0454560:three_prime_UTR
AATTAACCAATTCATCCCTT+GGG 0.438228 3_3:-45938590 None:intergenic
GCTTCGCCTTGTAGGGAAGT+TGG 0.439375 3_3:+45940348 Msa0454550:CDS
TCACTGTCATCTCGGTGGTT+GGG 0.441983 3_3:+45938637 Msa0454550:CDS
CTCACTGTCATCTCGGTGGT+TGG 0.450434 3_3:+45938636 Msa0454550:CDS
CACTTCGCGTAGCGTTTGTA+GGG 0.452430 3_3:-45940107 None:intergenic
GGACAGCAGCCTCATGATCC+TGG 0.452513 3_3:+45938306 Msa0454550:CDS
GTCATCTCGGTGGTTGGGAT+GGG 0.455132 3_3:+45938642 Msa0454550:CDS
TGAAGCTTACCAATAGATCC+TGG 0.456188 3_3:-45939929 None:intergenic
TAGACGTATCATAAGCTAGA+AGG 0.458014 3_3:-45940033 None:intergenic
AGATCTTTCAATGATATCAA+TGG 0.461819 3_3:-45940448 None:intergenic
GCTTTAGAAATACAAAAGTA+AGG 0.462582 3_3:+45939900 Msa0454550:CDS
CTTGCAATTGTGGCTATTGG+TGG 0.463248 3_3:+45939188 Msa0454550:CDS
GCCTTAAATCTAAGGTCTCT+AGG 0.465455 3_3:-45939955 None:intergenic
ATTTAAGAGTCTCAAGCAAC+TGG 0.471742 3_3:+45940543 Msa0454550:CDS
ATATGACATACTTGAAGCCT+TGG 0.472022 3_3:-45940691 None:intergenic
ATTGGAGAAACTCAAGTTGT+GGG 0.473081 3_3:+45938558 Msa0454550:CDS
TTGGTTACTTCCTTTAATAG+TGG 0.473358 3_3:-45938084 None:intergenic
TGGAACTGGTTGATATTGTT+AGG 0.473849 3_3:-45939679 None:intergenic
TTCAGAAGCTTCGCCTTGTA+GGG 0.474788 3_3:+45940341 Msa0454550:CDS
GGGTTTGTCAAAGAGGAAAC+AGG 0.478902 3_3:+45939440 Msa0454550:CDS
GTCTCAAGCAACTGGTACTT+AGG 0.480109 3_3:+45940551 Msa0454550:CDS
GGAAGTAAAGCTGCACATCC+AGG 0.482828 3_3:-45938324 None:intergenic
CCTGAGACTAATTAAACAAT+GGG 0.483325 3_3:+45939409 Msa0454550:CDS
CAACTTTGCTCGCGATAATG+AGG 0.487384 3_3:+45939625 Msa0454550:CDS
ATGTTGAATGCTCAAACATT+CGG 0.495358 3_3:+45939720 Msa0454550:CDS
GTGTTCGAGGACAACATCAA+TGG 0.496359 3_3:+45940752 Msa0454550:CDS
ATTTGATTTGGAGGAATCCA+TGG 0.496505 3_3:-45938455 None:intergenic
CAATGGATCATGAGTTAACA+TGG 0.504479 3_3:-45940431 None:intergenic
GAGCAAAGTTGCAAAAGCTT+AGG 0.509649 3_3:-45939613 None:intergenic
CAAAGCATTGATCGTGTTCG+AGG 0.510964 3_3:+45940739 Msa0454550:CDS
CCTACAAACGCTACGCGAAG+TGG 0.511792 3_3:+45940108 Msa0454550:CDS
GTTAGTGCAATGGATGATAC+TGG 0.513053 3_3:+45938423 Msa0454550:CDS
TTAGTAATTTGAACTTTGAA+GGG 0.513206 3_3:-45939796 None:intergenic
CACCTTCATATGCACAAAAG+AGG 0.514268 3_3:-45940495 None:intergenic
GAGACTTCTTGCAAAACAAA+AGG 0.514730 3_3:+45938871 Msa0454550:CDS
ATGCACAAAAGAGGATACTA+AGG 0.514784 3_3:-45940486 None:intergenic
ATACTTGCCACAAAGCAATC+TGG 0.515756 3_3:-45939773 None:intergenic
CTAGCTTATGATACGTCTAA+AGG 0.516007 3_3:+45940037 Msa0454550:CDS
CATTGGAGAAACTCAAGTTG+TGG 0.516713 3_3:+45938557 Msa0454550:CDS
GAAGTAACCAATATGATAAG+AGG 0.516962 3_3:+45938096 Msa0454550:CDS
TTTGAATACATAGGAACTCA+TGG 0.517228 3_3:+45941038 Msa0454550:intron
TGACAGTAAAGTGTTGGAAC+TGG 0.517587 3_3:-45939693 None:intergenic
TATTTGTAGACGAAGAATCC+TGG 0.518262 3_3:-45938370 None:intergenic
CGCGAAGTGGAAGCAGATCA+TGG 0.519236 3_3:+45940121 Msa0454550:CDS
TCAGTTGCTTCCGTTAGCTC+GGG 0.519761 3_3:+45938050 Msa0454550:CDS
ATTTCTTGACAGTAAAGTGT+TGG 0.520160 3_3:-45939699 None:intergenic
CATATATGAGATGAAACACT+TGG 0.521076 3_3:+45940243 Msa0454550:CDS
TCAAAGATGATTTGATTTGG+AGG 0.522967 3_3:-45938464 None:intergenic
TATGATACGTCTAAAGGTGT+TGG 0.525034 3_3:+45940043 Msa0454550:CDS
ACCTCCCCAACTTCCCTACA+AGG 0.525979 3_3:-45940354 None:intergenic
GATAATTCTGATTCTCCTTG+TGG 0.526523 3_3:+45941062 Msa0454550:CDS
AGTTAATATTCCACAACTGA+TGG 0.527088 3_3:+45940642 Msa0454550:CDS
CTTCTTGAGCCTCTCAAGAT+CGG 0.529292 3_3:-45940161 None:intergenic
CCTTTAATAGTGGAAGCAAA+TGG 0.531188 3_3:-45938074 None:intergenic
AGCAAATGGTCCCGAGCTAA+CGG 0.531567 3_3:-45938060 None:intergenic
ATATGAGACCTTTGAACAGA+TGG 0.534092 3_3:+45941154 Msa0454550:CDS
AGGTCTGCCACTTGCAATTG+TGG 0.535459 3_3:+45939178 Msa0454550:CDS
CCATTGTTTAATTAGTCTCA+GGG 0.540972 3_3:-45939408 None:intergenic
CTGGTGTCTACAACTTGCCA+AGG 0.541868 3_3:+45940674 Msa0454550:CDS
GTGGTTGGGATGGGAGGGCA+AGG 0.542027 3_3:+45938651 Msa0454550:CDS
TCATCAAGCTTAGGACTGAC+TGG 0.542547 3_3:-45939649 None:intergenic
ATTTACTTCATGAATGGGAA+AGG 0.543227 3_3:+45939234 Msa0454550:CDS
AGAGCTACCAGATTGCTTTG+TGG 0.547351 3_3:+45939766 Msa0454550:CDS
ATTAAACAATGGGTAGCGGA+AGG 0.551653 3_3:+45939419 Msa0454550:CDS
CCCTGAGACTAATTAAACAA+TGG 0.553644 3_3:+45939408 Msa0454550:CDS
GCCTTGTAGGGAAGTTGGGG+AGG 0.559278 3_3:+45940353 Msa0454550:CDS
TTGAATACATAGGAACTCAT+GGG 0.563152 3_3:+45941039 Msa0454550:intron
ATGTTGCCGTGTCTTGTAAG+AGG 0.563286 3_3:+45939006 Msa0454550:CDS
AAATCCATCAAAATTGGTGA+AGG 0.564974 3_3:+45940589 Msa0454550:CDS
TGAATCACCCATCTGTTCAA+AGG 0.567547 3_3:-45941162 Msa0454560:three_prime_UTR
ATTCAACTGAATGATGGCAT+TGG 0.569887 3_3:+45940073 Msa0454550:CDS
TTCGCCTTGTAGGGAAGTTG+GGG 0.570982 3_3:+45940350 Msa0454550:CDS
AGAAGAGCTCACTGTCATCT+CGG 0.570994 3_3:+45938629 Msa0454550:CDS
AGAGTTGATCCATAGAAGGT+TGG 0.574110 3_3:+45939499 Msa0454550:CDS
ACTAATTAAACAATGGGTAG+CGG 0.575636 3_3:+45939415 Msa0454550:CDS
GGCGACGAGTCATCAAGCTT+AGG 0.577276 3_3:-45939658 None:intergenic
TATGGAATTCAACTGAATGA+TGG 0.582946 3_3:+45940067 Msa0454550:CDS
AGCGGAAGGGTTTGTCAAAG+AGG 0.584072 3_3:+45939433 Msa0454550:CDS
TTTGTTATAACATGTATACT+GGG 0.585017 3_3:-45939293 None:intergenic
CGAAGACCTCTTACAAGACA+CGG 0.586484 3_3:-45939012 None:intergenic
GAAGGCACCTCCATCAGTTG+TGG 0.586524 3_3:-45940652 None:intergenic
AGCTGATTACCGATCTTGAG+AGG 0.592354 3_3:+45940152 Msa0454550:CDS
GAAGCTTACCAATAGATCCT+GGG 0.593572 3_3:-45939928 None:intergenic
GGAATGTCATCATTGTTGAA+AGG 0.595311 3_3:-45941085 Msa0454560:three_prime_UTR
ATCATTGTTGAAAGGCCACA+AGG 0.600912 3_3:-45941077 Msa0454560:three_prime_UTR
TCTCGGTGGTTGGGATGGGA+GGG 0.603298 3_3:+45938646 Msa0454550:CDS
TTAAACAATGGGTAGCGGAA+GGG 0.604090 3_3:+45939420 Msa0454550:CDS
GAAGAAGACAATACGCGCGA+CGG 0.608675 3_3:+45938204 Msa0454550:CDS
TAAGTCACTAGTTAGTGCAA+TGG 0.609987 3_3:+45938413 Msa0454550:CDS
GGCAAGTTGTAGACACCAGA+AGG 0.611578 3_3:-45940670 None:intergenic
TATGAGACCTTTGAACAGAT+GGG 0.614748 3_3:+45941155 Msa0454550:CDS
ACATCAATGGATCGTAGAGA+AGG 0.616713 3_3:+45940765 Msa0454550:CDS
AAGCAACTGATCGCAAGCGA+AGG 0.617283 3_3:-45938037 None:intergenic
ACACAGATGAAGAGTTGCTG+AGG 0.617839 3_3:+45938760 Msa0454550:CDS
CCAATAGCCACAATTGCAAG+TGG 0.625052 3_3:-45939185 None:intergenic
TCCATTTCAGAAATTTCACA+AGG 0.625769 3_3:-45938822 None:intergenic
TAATATTCCACAACTGATGG+AGG 0.634381 3_3:+45940645 Msa0454550:CDS
ATTAACCAATTCATCCCTTG+GGG 0.634992 3_3:-45938589 None:intergenic
CACAGATGAAGAGTTGCTGA+GGG 0.635894 3_3:+45938761 Msa0454550:CDS
GCTGCACATCCAGGATCATG+AGG 0.642394 3_3:-45938315 None:intergenic
TAAGTTGAACTTCTCTAGAG+AGG 0.643521 3_3:-45940620 None:intergenic
AAAACATTTACAAACAAACA+GGG 0.647953 3_3:+45938793 Msa0454550:CDS
TTGTGGGATTCAAAGCCCCA+AGG 0.648327 3_3:+45938574 Msa0454550:CDS
ACAAAAGTAAGGAATCTCCC+AGG 0.649056 3_3:+45939911 Msa0454550:CDS
CATATTCAACAACCTTAGAG+AGG 0.656445 3_3:+45938524 Msa0454550:CDS
TGATGAATATATGATATGTG+AGG 0.659084 3_3:+45938284 Msa0454550:CDS
TGTGGGATTCAAAGCCCCAA+GGG 0.661908 3_3:+45938575 Msa0454550:CDS
GATGAATATATGATATGTGA+GGG 0.669067 3_3:+45938285 Msa0454550:CDS
ATCAAATCATCTTTGACACG+AGG 0.674690 3_3:+45938471 Msa0454550:CDS
GTAGGGTATTAATCACAACT+AGG 0.674769 3_3:+45938976 Msa0454550:CDS
TGAATACATAGGAACTCATG+GGG 0.684174 3_3:+45941040 Msa0454550:intron
AAACATTTACAAACAAACAG+GGG 0.688861 3_3:+45938794 Msa0454550:CDS
ATGACAAAGACAATTTAACA+AGG 0.693265 3_3:-45940405 None:intergenic
AGAGCTCACTGTCATCTCGG+TGG 0.707010 3_3:+45938632 Msa0454550:CDS
AGTGCAATGGATGATACTGG+TGG 0.723556 3_3:+45938426 Msa0454550:CDS
GAAGTGGAAGCAGATCATGG+CGG 0.849265 3_3:+45940124 Msa0454550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTTTAAAAAAAATT+GGG - chr3_3:45940945-45940964 Msa0454560:intron 0.0%
!!! TATAATTTTTTAAAAAAAAT+TGG - chr3_3:45940946-45940965 Msa0454560:intron 0.0%
!!! ATTGGTTAATTTGTTGATAA+AGG + chr3_3:45938602-45938621 Msa0454550:CDS 20.0%
!!! TTGGTTAATTTGTTGATAAA+GGG + chr3_3:45938603-45938622 Msa0454550:CDS 20.0%
!!! AATACTTTAATTTTCGTGTA+TGG + chr3_3:45938721-45938740 Msa0454550:CDS 20.0%
!! AAAACATTTACAAACAAACA+GGG + chr3_3:45938793-45938812 Msa0454550:CDS 20.0%
!!! TCTTTGATTGATAGTAAAAA+TGG + chr3_3:45938951-45938970 Msa0454550:CDS 20.0%
!!! AAAGATTTTTCATGATTCAA+AGG - chr3_3:45939065-45939084 None:intergenic 20.0%
!! TTTGAATCATGAAAAATCTT+TGG + chr3_3:45939064-45939083 Msa0454550:CDS 20.0%
!! AAAATTGTTGAAAAATGTGA+AGG + chr3_3:45939158-45939177 Msa0454550:CDS 20.0%
!! ATGAAGTAAATATCTTTCTT+TGG - chr3_3:45939225-45939244 None:intergenic 20.0%
!! AAAGATATTTACTTCATGAA+TGG + chr3_3:45939228-45939247 Msa0454550:CDS 20.0%
!! AAGATATTTACTTCATGAAT+GGG + chr3_3:45939229-45939248 Msa0454550:CDS 20.0%
!!! TTTGTTATAACATGTATACT+GGG - chr3_3:45939296-45939315 None:intergenic 20.0%
!! TTAGTAATTTGAACTTTGAA+GGG - chr3_3:45939799-45939818 None:intergenic 20.0%
!! TTTAGTAATTTGAACTTTGA+AGG - chr3_3:45939800-45939819 None:intergenic 20.0%
!! ATTATGTTCCAAAAAATCTA+GGG + chr3_3:45939852-45939871 Msa0454550:CDS 20.0%
!! TAAAGCTTAAATATCTCAAA+TGG - chr3_3:45939886-45939905 None:intergenic 20.0%
!! ATACTAAGGTATAACAAATT+CGG - chr3_3:45940475-45940494 None:intergenic 20.0%
!!! AATTTGAAATCCATCAAAAT+TGG + chr3_3:45940583-45940602 Msa0454550:CDS 20.0%
!! GTGTATATATAAATCACAAT+TGG - chr3_3:45940843-45940862 Msa0454560:intron 20.0%
!!! TTTTAAAAAAAATTGGGGAA+AGG - chr3_3:45940939-45940958 Msa0454560:intron 20.0%
!!! TTCCTTTTTACTTTGAAATA+AGG + chr3_3:45941274-45941293 Msa0454550:three_prime_UTR 20.0%
! TGATGAATATATGATATGTG+AGG + chr3_3:45938284-45938303 Msa0454550:CDS 25.0%
! GATGAATATATGATATGTGA+GGG + chr3_3:45938285-45938304 Msa0454550:CDS 25.0%
! TTGAAAAAGTCTTTAATCTC+AGG - chr3_3:45938348-45938367 None:intergenic 25.0%
!!! TTAAAGACTTTTTCAAAACC+AGG + chr3_3:45938352-45938371 Msa0454550:CDS 25.0%
! ACAAATAGCTTACAAAATTC+AGG + chr3_3:45938386-45938405 Msa0454550:CDS 25.0%
! CAAAACATTTACAAACAAAC+AGG + chr3_3:45938792-45938811 Msa0454550:CDS 25.0%
! AAACATTTACAAACAAACAG+GGG + chr3_3:45938794-45938813 Msa0454550:CDS 25.0%
!! AAGTTTGGAATGAACAATTA+TGG + chr3_3:45938913-45938932 Msa0454550:CDS 25.0%
! GAACAATTATGGAATGATAT+TGG + chr3_3:45938924-45938943 Msa0454550:CDS 25.0%
!! TTGATAGTAAAAATGGAAGT+AGG + chr3_3:45938958-45938977 Msa0454550:CDS 25.0%
! TGATAGTAAAAATGGAAGTA+GGG + chr3_3:45938959-45938978 Msa0454550:CDS 25.0%
!!! TTTGGAGCTTTTTTATAAGA+AGG + chr3_3:45939082-45939101 Msa0454550:CDS 25.0%
! GATACATTCATAAGATTATC+AGG - chr3_3:45939134-45939153 None:intergenic 25.0%
!! CTTTGTTATAACATGTATAC+TGG - chr3_3:45939297-45939316 None:intergenic 25.0%
! AAACAATGCTTCTTATACTT+TGG + chr3_3:45939356-45939375 Msa0454550:CDS 25.0%
!!! TTATACTTTGGAATATATCC+TGG + chr3_3:45939368-45939387 Msa0454550:CDS 25.0%
! AATGATCCTTGATAAAATTC+AGG + chr3_3:45939589-45939608 Msa0454550:CDS 25.0%
! CATTATGTTCCAAAAAATCT+AGG + chr3_3:45939851-45939870 Msa0454550:CDS 25.0%
! TTATGTTCCAAAAAATCTAG+GGG + chr3_3:45939853-45939872 Msa0454550:CDS 25.0%
!!! AATAAATCCCCTAGATTTTT+TGG - chr3_3:45939863-45939882 None:intergenic 25.0%
!!! GCTTTAGAAATACAAAAGTA+AGG + chr3_3:45939900-45939919 Msa0454550:CDS 25.0%
! TTAACAAGCTTCAAAAGTTA+AGG + chr3_3:45940008-45940027 Msa0454550:CDS 25.0%
! CTCAAGAAGTTAAAAATGTT+GGG + chr3_3:45940175-45940194 Msa0454550:CDS 25.0%
! TCAAGAAGTTAAAAATGTTG+GGG + chr3_3:45940176-45940195 Msa0454550:CDS 25.0%
! ATGACAAAGACAATTTAACA+AGG - chr3_3:45940408-45940427 None:intergenic 25.0%
! AGATCTTTCAATGATATCAA+TGG - chr3_3:45940451-45940470 None:intergenic 25.0%
!! TTTTCAAATTCGCTCAAAAA+CGG + chr3_3:45940872-45940891 Msa0454550:intron 25.0%
! AATCGTCAGATCATTAAAAA+TGG + chr3_3:45940981-45941000 Msa0454550:intron 25.0%
!! TATTTGTGCTTTGAATACAT+AGG + chr3_3:45941029-45941048 Msa0454550:intron 25.0%
!! GTCCTTATTTCAAAGTAAAA+AGG - chr3_3:45941279-45941298 Msa0454560:intron 25.0%
TTGGTTACTTCCTTTAATAG+TGG - chr3_3:45938087-45938106 None:intergenic 30.0%
GAAGTAACCAATATGATAAG+AGG + chr3_3:45938096-45938115 Msa0454550:CDS 30.0%
!! TCAAAGATGATTTGATTTGG+AGG - chr3_3:45938467-45938486 None:intergenic 30.0%
GTGTCAAAGATGATTTGATT+TGG - chr3_3:45938470-45938489 None:intergenic 30.0%
TGAGTTTCTCCAATGTAAAA+TGG - chr3_3:45938552-45938571 None:intergenic 30.0%
AATTAACCAATTCATCCCTT+GGG - chr3_3:45938593-45938612 None:intergenic 30.0%
AAATTAACCAATTCATCCCT+TGG - chr3_3:45938594-45938613 None:intergenic 30.0%
! TTTGCTGTCAAAAACTATCT+TGG - chr3_3:45938691-45938710 None:intergenic 30.0%
! TCCTTGTGAAATTTCTGAAA+TGG + chr3_3:45938821-45938840 Msa0454550:CDS 30.0%
TCCATTTCAGAAATTTCACA+AGG - chr3_3:45938825-45938844 None:intergenic 30.0%
! TCATCTTGTTTGATGAAGTT+TGG + chr3_3:45938898-45938917 Msa0454550:CDS 30.0%
ATTTACTTCATGAATGGGAA+AGG + chr3_3:45939234-45939253 Msa0454550:CDS 30.0%
TGAAAATTTGAGTGTAGAGT+TGG + chr3_3:45939262-45939281 Msa0454550:CDS 30.0%
! AAGCATTGTTTGAGATTGTA+AGG - chr3_3:45939347-45939366 None:intergenic 30.0%
! CCATTGTTTAATTAGTCTCA+GGG - chr3_3:45939411-45939430 None:intergenic 30.0%
CCTGAGACTAATTAAACAAT+GGG + chr3_3:45939409-45939428 Msa0454550:CDS 30.0%
ACTAATTAAACAATGGGTAG+CGG + chr3_3:45939415-45939434 Msa0454550:CDS 30.0%
! TTAGGTCCTGAATTTTATCA+AGG - chr3_3:45939598-45939617 None:intergenic 30.0%
ATTTCTTGACAGTAAAGTGT+TGG - chr3_3:45939702-45939721 None:intergenic 30.0%
ATGTTGAATGCTCAAACATT+CGG + chr3_3:45939720-45939739 Msa0454550:CDS 30.0%
! CATAGTTTGCCTTAAATCTA+AGG - chr3_3:45939966-45939985 None:intergenic 30.0%
! CTTAGATTTAAGGCAAACTA+TGG + chr3_3:45939964-45939983 Msa0454550:CDS 30.0%
!!! TGAAGCTTGTTAATCTCTTT+TGG - chr3_3:45940001-45940020 None:intergenic 30.0%
TATGGAATTCAACTGAATGA+TGG + chr3_3:45940067-45940086 Msa0454550:CDS 30.0%
GCTCAAGAAGTTAAAAATGT+TGG + chr3_3:45940174-45940193 Msa0454550:CDS 30.0%
CAAGTGTTTCATCTCATATA+TGG - chr3_3:45940245-45940264 None:intergenic 30.0%
CATATATGAGATGAAACACT+TGG + chr3_3:45940243-45940262 Msa0454550:CDS 30.0%
!! CATTTGCATTTTCAAGATGA+AGG + chr3_3:45940520-45940539 Msa0454550:CDS 30.0%
AAATCCATCAAAATTGGTGA+AGG + chr3_3:45940589-45940608 Msa0454550:CDS 30.0%
AGTTAATATTCCACAACTGA+TGG + chr3_3:45940642-45940661 Msa0454550:CDS 30.0%
TTTGAATACATAGGAACTCA+TGG + chr3_3:45941038-45941057 Msa0454550:intron 30.0%
TTGAATACATAGGAACTCAT+GGG + chr3_3:45941039-45941058 Msa0454550:intron 30.0%
! CCTTTAATAGTGGAAGCAAA+TGG - chr3_3:45938077-45938096 None:intergenic 35.0%
CCATTTGCTTCCACTATTAA+AGG + chr3_3:45938074-45938093 Msa0454550:CDS 35.0%
! TCATGTCTGCAACTTCTTTT+GGG - chr3_3:45938125-45938144 None:intergenic 35.0%
! TTCATGTCTGCAACTTCTTT+TGG - chr3_3:45938126-45938145 None:intergenic 35.0%
TATTTGTAGACGAAGAATCC+TGG - chr3_3:45938373-45938392 None:intergenic 35.0%
TAAGTCACTAGTTAGTGCAA+TGG + chr3_3:45938413-45938432 Msa0454550:CDS 35.0%
!! ATTTGATTTGGAGGAATCCA+TGG - chr3_3:45938458-45938477 None:intergenic 35.0%
ATCAAATCATCTTTGACACG+AGG + chr3_3:45938471-45938490 Msa0454550:CDS 35.0%
!! CTCTCTAAGGTTGTTGAATA+TGG - chr3_3:45938526-45938545 None:intergenic 35.0%
CATATTCAACAACCTTAGAG+AGG + chr3_3:45938524-45938543 Msa0454550:CDS 35.0%
! ATTGGAGAAACTCAAGTTGT+GGG + chr3_3:45938558-45938577 Msa0454550:CDS 35.0%
ATTAACCAATTCATCCCTTG+GGG - chr3_3:45938592-45938611 None:intergenic 35.0%
GAGACTTCTTGCAAAACAAA+AGG + chr3_3:45938871-45938890 Msa0454550:CDS 35.0%
! GTAGGGTATTAATCACAACT+AGG + chr3_3:45938976-45938995 Msa0454550:CDS 35.0%
!! AAGGCATTCTTTGACTTGAA+TGG + chr3_3:45939101-45939120 Msa0454550:CDS 35.0%
CCCTGAGACTAATTAAACAA+TGG + chr3_3:45939408-45939427 Msa0454550:CDS 35.0%
! CCCATTGTTTAATTAGTCTC+AGG - chr3_3:45939412-45939431 None:intergenic 35.0%
CAAAGAGGAAACAGGAAAAA+CGG + chr3_3:45939448-45939467 Msa0454550:CDS 35.0%
! TAACAGAGTTGATCCATAGA+AGG + chr3_3:45939495-45939514 Msa0454550:CDS 35.0%
ATACAAGAACCAACCTTCTA+TGG - chr3_3:45939511-45939530 None:intergenic 35.0%
! TGGAACTGGTTGATATTGTT+AGG - chr3_3:45939682-45939701 None:intergenic 35.0%
ACCTAGAGACCTTAGATTTA+AGG + chr3_3:45939954-45939973 Msa0454550:CDS 35.0%
TAGACGTATCATAAGCTAGA+AGG - chr3_3:45940036-45940055 None:intergenic 35.0%
CTAGCTTATGATACGTCTAA+AGG + chr3_3:45940037-45940056 Msa0454550:CDS 35.0%
! TATGATACGTCTAAAGGTGT+TGG + chr3_3:45940043-45940062 Msa0454550:CDS 35.0%
ATTCAACTGAATGATGGCAT+TGG + chr3_3:45940073-45940092 Msa0454550:CDS 35.0%
TGTAGCTCTCTAATCCAAAA+TGG - chr3_3:45940382-45940401 None:intergenic 35.0%
CAATGGATCATGAGTTAACA+TGG - chr3_3:45940434-45940453 None:intergenic 35.0%
ATGCACAAAAGAGGATACTA+AGG - chr3_3:45940489-45940508 None:intergenic 35.0%
! ATCCTCTTTTGTGCATATGA+AGG + chr3_3:45940493-45940512 Msa0454550:CDS 35.0%
ATTTAAGAGTCTCAAGCAAC+TGG + chr3_3:45940543-45940562 Msa0454550:CDS 35.0%
! TAAGTTGAACTTCTCTAGAG+AGG - chr3_3:45940623-45940642 None:intergenic 35.0%
TAATATTCCACAACTGATGG+AGG + chr3_3:45940645-45940664 Msa0454550:CDS 35.0%
ATATGACATACTTGAAGCCT+TGG - chr3_3:45940694-45940713 None:intergenic 35.0%
CATACCTTTATCACCAACTT+CGG - chr3_3:45940813-45940832 Msa0454560:three_prime_UTR 35.0%
TGAATACATAGGAACTCATG+GGG + chr3_3:45941040-45941059 Msa0454550:intron 35.0%
GATAATTCTGATTCTCCTTG+TGG + chr3_3:45941062-45941081 Msa0454550:CDS 35.0%
GGAATGTCATCATTGTTGAA+AGG - chr3_3:45941088-45941107 Msa0454560:three_prime_UTR 35.0%
TCAAAGCAGACACTGAAATA+TGG - chr3_3:45941109-45941128 Msa0454560:three_prime_UTR 35.0%
ATATGAGACCTTTGAACAGA+TGG + chr3_3:45941154-45941173 Msa0454550:CDS 35.0%
TATGAGACCTTTGAACAGAT+GGG + chr3_3:45941155-45941174 Msa0454550:CDS 35.0%
TGGGACACCTCTTATCATAT+TGG - chr3_3:45938106-45938125 None:intergenic 40.0%
CGTATTGTCTTCTTCAGCTT+CGG - chr3_3:45938199-45938218 None:intergenic 40.0%
GTTAGTGCAATGGATGATAC+TGG + chr3_3:45938423-45938442 Msa0454550:CDS 40.0%
GATACTGGTGGAAAAAACCA+TGG + chr3_3:45938438-45938457 Msa0454550:CDS 40.0%
TGTAAAATGGAGCCTCTCTA+AGG - chr3_3:45938539-45938558 None:intergenic 40.0%
! AGAGAGGCTCCATTTTACAT+TGG + chr3_3:45938540-45938559 Msa0454550:CDS 40.0%
! CATTGGAGAAACTCAAGTTG+TGG + chr3_3:45938557-45938576 Msa0454550:CDS 40.0%
GCGTTAACTTCATAGTTTCC+AGG - chr3_3:45939389-45939408 None:intergenic 40.0%
!! ATTAAACAATGGGTAGCGGA+AGG + chr3_3:45939419-45939438 Msa0454550:CDS 40.0%
!! TTAAACAATGGGTAGCGGAA+GGG + chr3_3:45939420-45939439 Msa0454550:CDS 40.0%
AAAAACGGTGGAAGAAGTTG+CGG + chr3_3:45939463-45939482 Msa0454550:CDS 40.0%
! AGAGTTGATCCATAGAAGGT+TGG + chr3_3:45939499-45939518 Msa0454550:CDS 40.0%
GCTAGAAGTTGTCATGTTCA+TGG + chr3_3:45939554-45939573 Msa0454550:CDS 40.0%
GAGCAAAGTTGCAAAAGCTT+AGG - chr3_3:45939616-45939635 None:intergenic 40.0%
!! TGACAGTAAAGTGTTGGAAC+TGG - chr3_3:45939696-45939715 None:intergenic 40.0%
ATACTTGCCACAAAGCAATC+TGG - chr3_3:45939776-45939795 None:intergenic 40.0%
ACAAAAGTAAGGAATCTCCC+AGG + chr3_3:45939911-45939930 Msa0454550:CDS 40.0%
GAAGCTTACCAATAGATCCT+GGG - chr3_3:45939931-45939950 None:intergenic 40.0%
TGAAGCTTACCAATAGATCC+TGG - chr3_3:45939932-45939951 None:intergenic 40.0%
! GCCTTAAATCTAAGGTCTCT+AGG - chr3_3:45939958-45939977 None:intergenic 40.0%
!! ACGTCTAAAGGTGTTGGATA+TGG + chr3_3:45940049-45940068 Msa0454550:CDS 40.0%
CACCTTCATATGCACAAAAG+AGG - chr3_3:45940498-45940517 None:intergenic 40.0%
! TGCTCCTTCACCAATTTTGA+TGG - chr3_3:45940596-45940615 None:intergenic 40.0%
ACATCAATGGATCGTAGAGA+AGG + chr3_3:45940765-45940784 Msa0454550:CDS 40.0%
GTAGAGAAGGTTCCATTTGT+AGG + chr3_3:45940778-45940797 Msa0454550:CDS 40.0%
CGGTCAACTATTCCTACAAA+TGG - chr3_3:45940793-45940812 Msa0454560:three_prime_UTR 40.0%
TAGGAATAGTTGACCGAAGT+TGG + chr3_3:45940797-45940816 Msa0454550:intron 40.0%
!! TTGACCGAAGTTGGTGATAA+AGG + chr3_3:45940806-45940825 Msa0454550:intron 40.0%
GCTCAAAAACGGCTGTAAAA+TGG + chr3_3:45940883-45940902 Msa0454550:intron 40.0%
ATCATTGTTGAAAGGCCACA+AGG - chr3_3:45941080-45941099 Msa0454560:three_prime_UTR 40.0%
TGAATCACCCATCTGTTCAA+AGG - chr3_3:45941165-45941184 Msa0454560:three_prime_UTR 40.0%
ATCAGTTGCTTCCGTTAGCT+CGG + chr3_3:45938049-45938068 Msa0454550:CDS 45.0%
AGTGCAATGGATGATACTGG+TGG + chr3_3:45938426-45938445 Msa0454550:CDS 45.0%
AGAAGAGCTCACTGTCATCT+CGG + chr3_3:45938629-45938648 Msa0454550:CDS 45.0%
ACACAGATGAAGAGTTGCTG+AGG + chr3_3:45938760-45938779 Msa0454550:CDS 45.0%
CACAGATGAAGAGTTGCTGA+GGG + chr3_3:45938761-45938780 Msa0454550:CDS 45.0%
ATGTTGCCGTGTCTTGTAAG+AGG + chr3_3:45939006-45939025 Msa0454550:CDS 45.0%
CGAAGACCTCTTACAAGACA+CGG - chr3_3:45939015-45939034 None:intergenic 45.0%
CCAATAGCCACAATTGCAAG+TGG - chr3_3:45939188-45939207 None:intergenic 45.0%
CCACTTGCAATTGTGGCTAT+TGG + chr3_3:45939185-45939204 Msa0454550:CDS 45.0%
CTTGCAATTGTGGCTATTGG+TGG + chr3_3:45939188-45939207 Msa0454550:CDS 45.0%
GGGTTTGTCAAAGAGGAAAC+AGG + chr3_3:45939440-45939459 Msa0454550:CDS 45.0%
AGAGGAAACAGGAAAAACGG+TGG + chr3_3:45939451-45939470 Msa0454550:CDS 45.0%
CAACTTTGCTCGCGATAATG+AGG + chr3_3:45939625-45939644 Msa0454550:CDS 45.0%
TCATCAAGCTTAGGACTGAC+TGG - chr3_3:45939652-45939671 None:intergenic 45.0%
AGAGCTACCAGATTGCTTTG+TGG + chr3_3:45939766-45939785 Msa0454550:CDS 45.0%
AGGAATCTCCCAGGATCTAT+TGG + chr3_3:45939920-45939939 Msa0454550:CDS 45.0%
AGCTGATTACCGATCTTGAG+AGG + chr3_3:45940152-45940171 Msa0454550:CDS 45.0%
CTTCTTGAGCCTCTCAAGAT+CGG - chr3_3:45940164-45940183 None:intergenic 45.0%
TTCAGAAGCTTCGCCTTGTA+GGG + chr3_3:45940341-45940360 Msa0454550:CDS 45.0%
! AGTTGGGGAGGTTTCCATTT+TGG + chr3_3:45940365-45940384 Msa0454550:CDS 45.0%
GTCTCAAGCAACTGGTACTT+AGG + chr3_3:45940551-45940570 Msa0454550:CDS 45.0%
!! CAAAGCATTGATCGTGTTCG+AGG + chr3_3:45940739-45940758 Msa0454550:CDS 45.0%
GTGTTCGAGGACAACATCAA+TGG + chr3_3:45940752-45940771 Msa0454550:CDS 45.0%
!!! TAATTTTTTAAAAAAAATTG+GGG - chr3_3:45940944-45940963 Msa0454560:intron 5.0%
AAGCAACTGATCGCAAGCGA+AGG - chr3_3:45938040-45938059 None:intergenic 50.0%
TCAGTTGCTTCCGTTAGCTC+GGG + chr3_3:45938050-45938069 Msa0454550:CDS 50.0%
AGCAAATGGTCCCGAGCTAA+CGG - chr3_3:45938063-45938082 None:intergenic 50.0%
GAAGAAGACAATACGCGCGA+CGG + chr3_3:45938204-45938223 Msa0454550:CDS 50.0%
GGAAGTAAAGCTGCACATCC+AGG - chr3_3:45938327-45938346 None:intergenic 50.0%
TTGTGGGATTCAAAGCCCCA+AGG + chr3_3:45938574-45938593 Msa0454550:CDS 50.0%
TGTGGGATTCAAAGCCCCAA+GGG + chr3_3:45938575-45938594 Msa0454550:CDS 50.0%
CAAAGCCCCAAGGGATGAAT+TGG + chr3_3:45938584-45938603 Msa0454550:CDS 50.0%
TCACTGTCATCTCGGTGGTT+GGG + chr3_3:45938637-45938656 Msa0454550:CDS 50.0%
! AGGTCTGCCACTTGCAATTG+TGG + chr3_3:45939178-45939197 Msa0454550:CDS 50.0%
AGCGGAAGGGTTTGTCAAAG+AGG + chr3_3:45939433-45939452 Msa0454550:CDS 50.0%
CACTTCGCGTAGCGTTTGTA+GGG - chr3_3:45940110-45940129 None:intergenic 50.0%
GAAGTGGAAGCAGATCATGG+CGG + chr3_3:45940124-45940143 Msa0454550:CDS 50.0%
CTTCAGAAGCTTCGCCTTGT+AGG + chr3_3:45940340-45940359 Msa0454550:CDS 50.0%
CTTCGCCTTGTAGGGAAGTT+GGG + chr3_3:45940349-45940368 Msa0454550:CDS 50.0%
TTCGCCTTGTAGGGAAGTTG+GGG + chr3_3:45940350-45940369 Msa0454550:CDS 50.0%
GGCAAGTTGTAGACACCAGA+AGG - chr3_3:45940673-45940692 None:intergenic 50.0%
CTGGTGTCTACAACTTGCCA+AGG + chr3_3:45940674-45940693 Msa0454550:CDS 50.0%
GCTGCACATCCAGGATCATG+AGG - chr3_3:45938318-45938337 None:intergenic 55.0%
AGAGCTCACTGTCATCTCGG+TGG + chr3_3:45938632-45938651 Msa0454550:CDS 55.0%
CTCACTGTCATCTCGGTGGT+TGG + chr3_3:45938636-45938655 Msa0454550:CDS 55.0%
TGTCATCTCGGTGGTTGGGA+TGG + chr3_3:45938641-45938660 Msa0454550:CDS 55.0%
GTCATCTCGGTGGTTGGGAT+GGG + chr3_3:45938642-45938661 Msa0454550:CDS 55.0%
GGCGACGAGTCATCAAGCTT+AGG - chr3_3:45939661-45939680 None:intergenic 55.0%
CCACTTCGCGTAGCGTTTGT+AGG - chr3_3:45940111-45940130 None:intergenic 55.0%
CCTACAAACGCTACGCGAAG+TGG + chr3_3:45940108-45940127 Msa0454550:CDS 55.0%
CGCGAAGTGGAAGCAGATCA+TGG + chr3_3:45940121-45940140 Msa0454550:CDS 55.0%
GCTTCGCCTTGTAGGGAAGT+TGG + chr3_3:45940348-45940367 Msa0454550:CDS 55.0%
ACCTCCCCAACTTCCCTACA+AGG - chr3_3:45940357-45940376 None:intergenic 55.0%
!! GAAGGCACCTCCATCAGTTG+TGG - chr3_3:45940655-45940674 None:intergenic 55.0%
!! CAACTGATGGAGGTGCCTTC+TGG + chr3_3:45940655-45940674 Msa0454550:CDS 55.0%
GGACAGCAGCCTCATGATCC+TGG + chr3_3:45938306-45938325 Msa0454550:CDS 60.0%
ATCTCGGTGGTTGGGATGGG+AGG + chr3_3:45938645-45938664 Msa0454550:CDS 60.0%
TCTCGGTGGTTGGGATGGGA+GGG + chr3_3:45938646-45938665 Msa0454550:CDS 60.0%
GCCTTGTAGGGAAGTTGGGG+AGG + chr3_3:45940353-45940372 Msa0454550:CDS 60.0%
GTGGTTGGGATGGGAGGGCA+AGG + chr3_3:45938651-45938670 Msa0454550:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 45938018 45941315 45938018 ID=Msa0454550;Name=Msa0454550
chr3_3 mRNA 45938018 45941315 45938018 ID=Msa0454550-mRNA-1;Parent=Msa0454550;Name=Msa0454550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0.5|1|1|1|2|119|980
chr3_3 exon 45938018 45940814 45938018 ID=Msa0454550-mRNA-1:exon:8540;Parent=Msa0454550-mRNA-1
chr3_3 exon 45941051 45941315 45941051 ID=Msa0454550-mRNA-1:exon:8541;Parent=Msa0454550-mRNA-1
chr3_3 CDS 45938018 45940814 45938018 ID=Msa0454550-mRNA-1:cds;Parent=Msa0454550-mRNA-1
chr3_3 CDS 45941051 45941196 45941051 ID=Msa0454550-mRNA-1:cds;Parent=Msa0454550-mRNA-1
chr3_3 three_prime_UTR 45941197 45941315 45941197 ID=Msa0454550-mRNA-1:three_prime_utr;Parent=Msa0454550-mRNA-1
Gene Sequence

>Msa0454550

ATGTGTGACACTGTAATCTCCTTCGCTTGCGATCAGTTGCTTCCGTTAGCTCGGGACCATTTGCTTCCACTATTAAAGGAAGTAACCAATATGATAAGAGGTGTCCCAAAAGAAGTTGCAGACATGAAAAATGAACTAGAAAGCATTGAAGACTTCATCAACAATGCAGATAGAATGACCGAAGCTGAAGAAGACAATACGCGCGACGGAATCAAAGCAAAGATCAGACAGCTGAGAGAAGCATCTTTTCACATACAAGATGTCATTGATGAATATATGATATGTGAGGGACAGCAGCCTCATGATCCTGGATGTGCAGCTTTACTTCCTGAGATTAAAGACTTTTTCAAAACCAGGATTCTTCGTCTACAAATAGCTTACAAAATTCAGGACATTAAGTCACTAGTTAGTGCAATGGATGATACTGGTGGAAAAAACCATGGATTCCTCCAAATCAAATCATCTTTGACACGAGGATCAAGTAGTTCTGCAGCAAATGAAAACACCATATTCAACAACCTTAGAGAGGCTCCATTTTACATTGGAGAAACTCAAGTTGTGGGATTCAAAGCCCCAAGGGATGAATTGGTTAATTTGTTGATAAAGGGAAGAGAAGAGCTCACTGTCATCTCGGTGGTTGGGATGGGAGGGCAAGGTAAAACAACTCTTGCCAAGATAGTTTTTGACAGCAAAGATGTTATTGAATACTTTAATTTTCGTGTATGGATCACAGTGTCTCGACACACAGATGAAGAGTTGCTGAGGGACATGTTGCAAAACATTTACAAACAAACAGGGGAAGATCCTTGTGAAATTTCTGAAATGGATCGAAAGTCATTAATTGATAAAGTGAGAGACTTCTTGCAAAACAAAAGGTATATCATCTTGTTTGATGAAGTTTGGAATGAACAATTATGGAATGATATTGGATTTTCTTTGATTGATAGTAAAAATGGAAGTAGGGTATTAATCACAACTAGGAAGATTGATGTTGCCGTGTCTTGTAAGAGGTCTTCGTTTTTTCTTGAAGTGCATGAGTTGAAACCTTTGAATCATGAAAAATCTTTGGAGCTTTTTTATAAGAAGGCATTCTTTGACTTGAATGGACTATGTCCTGATAATCTTATGAATGTATCTTCTAAAATTGTTGAAAAATGTGAAGGTCTGCCACTTGCAATTGTGGCTATTGGTGGTCTTTTGTCTACCAAAGAAAGATATTTACTTCATGAATGGGAAAGGTTTAGTGAAAATTTGAGTGTAGAGTTGGACAACAATCCCAGTATACATGTTATAACAAAGATTTTAAGCTTTAGTTTTCATGATTTACCTTACAATCTCAAACAATGCTTCTTATACTTTGGAATATATCCTGGAAACTATGAAGTTAACGCCCTGAGACTAATTAAACAATGGGTAGCGGAAGGGTTTGTCAAAGAGGAAACAGGAAAAACGGTGGAAGAAGTTGCGGAACAATATTTAACAGAGTTGATCCATAGAAGGTTGGTTCTTGTATCTTCTTTTTCAAGTAATAGCAAAGCTAGAAGTTGTCATGTTCATGGCTTAATACGAGAAATGATCCTTGATAAAATTCAGGACCTAAGCTTTTGCAACTTTGCTCGCGATAATGAGGACCAGTCAGTCCTAAGCTTGATGACTCGTCGCCTAACAATATCAACCAGTTCCAACACTTTACTGTCAAGAAATGTTGAATGCTCAAACATTCGGTCACTGCATGTTTTCAAAAATGAAGAGCTACCAGATTGCTTTGTGGCAAGTATCCCTTCAAAGTTCAAATTACTAAAAGTATTTGATTTTGAAGATGTTTCACTGCATCATTATGTTCCAAAAAATCTAGGGGATTTATTCCATTTGAGATATTTAAGCTTTAGAAATACAAAAGTAAGGAATCTCCCAGGATCTATTGGTAAGCTTCATAACCTAGAGACCTTAGATTTAAGGCAAACTATGGTGCGCGAGTTACCAAAAGAGATTAACAAGCTTCAAAAGTTAAGGCACCTTCTAGCTTATGATACGTCTAAAGGTGTTGGATATGGAATTCAACTGAATGATGGCATTGGAGACATAGTGTCCCTACAAACGCTACGCGAAGTGGAAGCAGATCATGGCGGAGTTGAGCTGATTACCGATCTTGAGAGGCTCAAGAAGTTAAAAATGTTGGGGTTGACTAATGTTAAGAAAGAATACACAAAAGCTATATGTTCTTCCATATATGAGATGAAACACTTGGAGAAGCTATACATTGCTGCAATAAATAGACATGAAGTCATTGATTTTTTGAATTTCGATGTATCATTACATAAACTTCAGAAGCTTCGCCTTGTAGGGAAGTTGGGGAGGTTTCCATTTTGGATTAGAGAGCTACAAAGCCTTGTTAAATTGTCTTTGTCATATTCCATGTTAACTCATGATCCATTGATATCATTGAAAGATCTTCCGAATTTGTTATACCTTAGTATCCTCTTTTGTGCATATGAAGGTGAACATTTGCATTTTCAAGATGAAGGATTTAAGAGTCTCAAGCAACTGGTACTTAGGCGCTTGTATAATTTGAAATCCATCAAAATTGGTGAAGGAGCATTGTCCTCTCTAGAGAAGTTCAACTTAGTTAATATTCCACAACTGATGGAGGTGCCTTCTGGTGTCTACAACTTGCCAAGGCTTCAAGTATGTCATATCATAAACATGACTGATGAATTTGAGCAAAGCATTGATCGTGTTCGAGGACAACATCAATGGATCGTAGAGAAGGTTCCATTTGTAGGAATAGTTGACCGAAGAACTCATGGGGATAATTCTGATTCTCCTTGTGGCCTTTCAACAATGATGACATTCCATATTTCAGTGTCTGCTTTGATGCGTCAATTCTCAAATAAAGAGCAATATGAGACCTTTGAACAGATGGGTGATTCAAGACATTTTTGA
Protein sequence

>Msa0454550

MCDTVISFACDQLLPLARDHLLPLLKEVTNMIRGVPKEVADMKNELESIEDFINNADRMTEAEEDNTRDGIKAKIRQLREASFHIQDVIDEYMICEGQQPHDPGCAALLPEIKDFFKTRILRLQIAYKIQDIKSLVSAMDDTGGKNHGFLQIKSSLTRGSSSSAANENTIFNNLREAPFYIGETQVVGFKAPRDELVNLLIKGREELTVISVVGMGGQGKTTLAKIVFDSKDVIEYFNFRVWITVSRHTDEELLRDMLQNIYKQTGEDPCEISEMDRKSLIDKVRDFLQNKRYIILFDEVWNEQLWNDIGFSLIDSKNGSRVLITTRKIDVAVSCKRSSFFLEVHELKPLNHEKSLELFYKKAFFDLNGLCPDNLMNVSSKIVEKCEGLPLAIVAIGGLLSTKERYLLHEWERFSENLSVELDNNPSIHVITKILSFSFHDLPYNLKQCFLYFGIYPGNYEVNALRLIKQWVAEGFVKEETGKTVEEVAEQYLTELIHRRLVLVSSFSSNSKARSCHVHGLIREMILDKIQDLSFCNFARDNEDQSVLSLMTRRLTISTSSNTLLSRNVECSNIRSLHVFKNEELPDCFVASIPSKFKLLKVFDFEDVSLHHYVPKNLGDLFHLRYLSFRNTKVRNLPGSIGKLHNLETLDLRQTMVRELPKEINKLQKLRHLLAYDTSKGVGYGIQLNDGIGDIVSLQTLREVEADHGGVELITDLERLKKLKMLGLTNVKKEYTKAICSSIYEMKHLEKLYIAAINRHEVIDFLNFDVSLHKLQKLRLVGKLGRFPFWIRELQSLVKLSLSYSMLTHDPLISLKDLPNLLYLSILFCAYEGEHLHFQDEGFKSLKQLVLRRLYNLKSIKIGEGALSSLEKFNLVNIPQLMEVPSGVYNLPRLQVCHIINMTDEFEQSIDRVRGQHQWIVEKVPFVGIVDRRTHGDNSDSPCGLSTMMTFHISVSALMRQFSNKEQYETFEQMGDSRHF*