AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0457760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0457760 MtrunA17_Chr3g0087271 81.958 521 17 3 1 454 1 511 0.0 825
Msa0457760 MtrunA17_Chr3g0087261 67.946 521 89 4 1 454 1 510 0.0 705
Msa0457760 MtrunA17_Chr2g0329321 47.284 497 206 5 3 453 2 488 3.64e-161 464
Msa0457760 MtrunA17_Chr2g0329201 45.010 511 198 6 14 453 9 507 4.59e-154 447
Msa0457760 MtrunA17_Chr4g0033311 44.061 522 206 6 7 453 5 515 4.33e-153 445
Msa0457760 MtrunA17_Chr6g0482131 45.492 488 185 5 37 453 35 512 1.13e-152 443
Msa0457760 MtrunA17_Chr4g0033271 43.798 516 205 5 8 453 11 511 8.66e-150 436
Msa0457760 MtrunA17_Chr4g0033321 44.163 514 205 7 10 451 4 507 1.25e-149 436
Msa0457760 MtrunA17_Chr4g0033201 43.411 516 208 7 11 453 8 512 2.41e-149 435
Msa0457760 MtrunA17_Chr4g0033401 44.078 515 205 7 10 451 4 508 3.56e-148 432
Msa0457760 MtrunA17_Chr3g0088441 43.429 525 207 7 7 453 2 514 1.15e-147 431
Msa0457760 MtrunA17_Chr4g0010501 44.877 488 186 6 35 453 21 494 2.61e-147 429
Msa0457760 MtrunA17_Chr2g0329191 44.266 497 197 5 27 453 23 509 3.35e-147 429
Msa0457760 MtrunA17_Chr6g0482071 44.294 517 200 7 8 453 14 513 1.88e-146 428
Msa0457760 MtrunA17_Chr5g0430451 45.509 501 208 6 8 453 8 498 1.95e-146 427
Msa0457760 MtrunA17_Chr6g0482081 46.201 487 180 6 37 451 35 511 1.37e-144 423
Msa0457760 MtrunA17_Chr4g0033191 43.238 488 198 5 36 453 41 519 1.26e-143 421
Msa0457760 MtrunA17_Chr4g0033331 43.762 505 202 7 18 451 20 513 1.92e-143 420
Msa0457760 MtrunA17_Chr4g0033341 42.214 533 215 8 1 453 24 543 9.27e-140 411
Msa0457760 MtrunA17_Chr4g0033261 41.154 520 197 6 8 453 9 493 1.72e-134 396
Msa0457760 MtrunA17_Chr4g0043091 45.606 421 197 3 56 451 88 501 2.38e-133 394
Msa0457760 MtrunA17_Chr6g0482941 42.885 513 210 8 9 453 15 512 1.09e-131 390
Msa0457760 MtrunA17_Chr6g0482951 42.829 516 206 9 9 453 15 512 2.01e-130 387
Msa0457760 MtrunA17_Chr4g0033231 44.028 427 175 4 56 453 102 493 5.28e-128 380
Msa0457760 MtrunA17_Chr4g0042171 44.681 423 199 6 56 451 84 498 4.51e-126 375
Msa0457760 MtrunA17_Chr4g0074561 43.160 424 206 4 56 452 96 511 1.01e-123 370
Msa0457760 MtrunA17_Chr3g0087201 49.412 340 157 3 113 451 17 342 1.76e-121 357
Msa0457760 MtrunA17_Chr2g0288021 39.370 508 229 5 11 451 12 507 6.47e-121 362
Msa0457760 MtrunA17_Chr2g0288071 44.208 423 203 3 56 453 128 542 3.04e-120 362
Msa0457760 MtrunA17_Chr2g0301231 44.656 421 174 5 63 453 1 392 3.07e-120 356
Msa0457760 MtrunA17_Chr3g0090131 37.474 483 216 5 39 454 22 485 3.10e-120 360
Msa0457760 MtrunA17_Chr2g0317821 39.024 492 223 5 28 451 21 503 1.29e-118 357
Msa0457760 MtrunA17_Chr2g0317841 39.024 492 223 5 28 451 21 503 1.53e-118 357
Msa0457760 MtrunA17_Chr4g0074551 38.846 520 234 6 1 453 22 524 2.28e-118 357
Msa0457760 MtrunA17_Chr4g0006111 39.592 490 199 6 35 453 62 525 4.09e-118 355
Msa0457760 MtrunA17_Chr4g0006131 40.600 500 199 8 24 451 26 499 2.48e-117 353
Msa0457760 MtrunA17_Chr3g0090111 36.439 483 220 6 39 454 20 482 8.04e-116 348
Msa0457760 MtrunA17_Chr4g0006971 38.351 485 208 8 37 451 26 489 3.32e-112 340
Msa0457760 MtrunA17_Chr7g0242691 37.331 517 228 9 8 453 4 495 1.80e-110 335
Msa0457760 MtrunA17_Chr7g0242681 40.566 424 202 9 56 451 98 499 6.03e-103 317
Msa0457760 MtrunA17_Chr1g0195611 35.551 481 223 6 38 451 27 487 1.37e-96 300
Msa0457760 MtrunA17_Chr5g0428831 35.102 490 216 8 37 451 26 488 4.40e-96 298
Msa0457760 MtrunA17_Chr7g0234091 35.656 488 220 9 35 453 71 533 8.17e-92 288
Msa0457760 MtrunA17_Chr7g0234111 35.343 481 218 8 39 451 76 531 2.40e-90 284
Msa0457760 MtrunA17_Chr5g0418871 46.786 280 121 3 56 307 43 322 9.15e-89 274
Msa0457760 MtrunA17_Chr7g0234131 33.958 480 236 8 35 451 71 532 6.73e-88 278
Msa0457760 MtrunA17_Chr1g0195641 35.516 397 176 5 37 367 26 408 3.37e-78 249
Msa0457760 MtrunA17_Chr7g0230651 38.919 370 174 7 56 398 32 376 7.04e-78 247
Msa0457760 MtrunA17_Chr7g0236731 43.541 209 103 2 86 289 57 255 1.22e-52 178
Msa0457760 MtrunA17_Chr7g0227561 37.190 242 103 2 40 238 48 283 2.43e-51 176
Msa0457760 MtrunA17_Chr8g0352881 37.398 123 66 2 183 295 36 157 3.66e-22 92.8
Msa0457760 MtrunA17_Chr5g0418861 48.193 83 42 1 370 451 8 90 7.65e-22 89.7
Msa0457760 MtrunA17_Chr3g0087191 38.621 145 20 2 37 112 21 165 5.77e-21 89.7
Msa0457760 MtrunA17_Chr4g0068871 23.598 428 222 9 58 454 182 535 1.04e-18 89.0
Msa0457760 MtrunA17_Chr2g0288031 60.714 56 22 0 122 177 5 60 2.51e-17 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0457760 AT2G44480.1 45.175 487 187 4 35 451 32 508 4.85e-150 437
Msa0457760 AT2G44480.3 45.175 487 187 4 35 451 63 539 6.72e-150 438
Msa0457760 AT2G44480.2 49.038 416 175 3 63 451 1 406 6.26e-148 428
Msa0457760 AT2G44450.1 41.529 484 199 5 38 451 31 500 2.32e-133 394
Msa0457760 AT3G60130.2 47.418 426 181 7 57 454 40 450 9.86e-133 391
Msa0457760 AT5G44640.1 40.156 513 217 8 12 451 6 501 1.88e-132 392
Msa0457760 AT3G60130.1 43.958 480 218 8 10 454 39 502 3.11e-132 392
Msa0457760 AT5G42260.1 40.392 510 217 7 9 447 4 497 1.33e-131 390
Msa0457760 AT5G54570.1 42.710 487 201 8 35 451 27 505 2.63e-130 387
Msa0457760 AT1G26560.1 44.340 424 199 5 56 451 92 506 4.66e-129 383
Msa0457760 AT5G54570.2 46.635 416 187 7 63 451 1 408 2.89e-128 379
Msa0457760 AT3G60130.3 46.479 426 174 8 57 454 40 439 7.00e-126 373
Msa0457760 AT3G18080.1 45.519 424 192 5 56 453 99 509 2.04e-125 374
Msa0457760 AT2G44450.2 47.383 363 176 3 90 451 1 349 1.62e-123 363
Msa0457760 AT3G60140.1 43.794 427 203 6 56 453 86 504 1.16e-122 369
Msa0457760 AT5G24550.1 38.104 517 240 8 9 453 3 511 5.57e-122 366
Msa0457760 AT2G25630.1 42.453 424 185 6 56 451 91 483 1.37e-120 361
Msa0457760 AT3G18070.3 40.535 486 200 8 36 453 28 492 3.11e-120 360
Msa0457760 AT3G18070.1 40.329 486 207 8 36 453 28 498 2.63e-119 358
Msa0457760 AT1G61820.1 39.836 487 216 5 34 451 26 504 8.56e-119 357
Msa0457760 AT1G47600.2 40.486 494 205 10 28 453 38 510 2.70e-118 356
Msa0457760 AT1G51470.1 40.524 496 203 10 28 453 38 511 5.04e-118 355
Msa0457760 AT1G47600.1 40.688 494 205 11 28 453 38 511 8.47e-118 354
Msa0457760 AT1G61810.1 39.638 497 219 6 28 451 19 507 2.67e-117 353
Msa0457760 AT5G25980.2 39.579 523 232 11 1 451 12 522 4.13e-117 354
Msa0457760 AT4G21760.2 37.524 517 236 8 8 453 23 523 4.48e-117 353
Msa0457760 AT5G24540.1 38.521 514 238 7 11 453 5 511 5.86e-117 353
Msa0457760 AT2G44470.3 38.776 490 215 8 38 453 29 507 1.97e-115 351
Msa0457760 AT1G61810.5 42.651 415 204 4 63 451 1 407 2.05e-113 340
Msa0457760 AT1G02850.2 38.750 480 208 7 38 451 26 485 2.63e-113 342
Msa0457760 AT1G61820.3 45.040 373 196 3 80 451 1 365 2.85e-113 338
Msa0457760 AT1G61810.3 39.669 484 211 6 28 438 19 494 4.20e-113 343
Msa0457760 AT4G27830.1 36.699 515 223 10 9 451 1 484 7.60e-112 339
Msa0457760 AT3G60120.1 38.241 489 220 8 37 453 13 491 1.54e-111 339
Msa0457760 AT2G32860.2 41.014 434 205 10 54 451 153 571 2.82e-111 341
Msa0457760 AT5G26000.1 38.314 522 240 10 1 451 1 511 2.17e-110 337
Msa0457760 AT2G44490.1 40.465 430 210 10 56 451 75 492 3.19e-110 337
Msa0457760 AT2G32860.1 40.371 431 211 9 54 451 153 570 1.79e-109 336
Msa0457760 AT4G21760.1 36.364 517 232 9 8 453 23 513 6.61e-109 332
Msa0457760 AT1G02850.5 37.177 503 207 8 38 451 26 508 1.23e-108 331
Msa0457760 AT5G36890.1 38.389 422 216 4 56 451 76 479 8.46e-108 328
Msa0457760 AT5G36890.2 38.389 422 216 4 56 451 76 479 8.53e-108 328
Msa0457760 AT1G02850.4 37.103 504 207 9 38 451 26 509 7.36e-107 327
Msa0457760 AT4G27830.2 40.000 420 197 8 63 451 1 396 8.11e-107 323
Msa0457760 AT4G27820.1 38.367 490 208 9 32 451 17 482 1.73e-106 325
Msa0457760 AT5G54570.3 41.109 433 178 7 35 398 27 451 2.23e-106 323
Msa0457760 AT2G44460.1 42.254 426 206 8 56 451 89 504 9.70e-105 323
Msa0457760 AT2G44480.5 46.945 311 154 2 142 451 2 302 1.23e-103 311
Msa0457760 AT3G21370.1 39.815 432 217 8 56 454 93 514 5.84e-103 317
Msa0457760 AT3G18070.2 42.417 422 211 10 36 453 28 421 9.48e-103 313
Msa0457760 AT4G22100.1 38.785 428 215 6 52 451 74 482 4.91e-102 314
Msa0457760 AT4G27820.2 40.855 421 193 8 63 451 1 397 2.21e-101 309
Msa0457760 AT4G27820.3 40.855 421 193 8 63 451 1 397 2.21e-101 309
Msa0457760 AT1G02850.1 36.875 480 190 8 38 451 26 458 2.21e-101 311
Msa0457760 AT1G52400.3 40.416 433 205 9 56 451 99 515 4.20e-101 312
Msa0457760 AT1G52400.1 40.416 433 205 9 56 451 99 515 4.20e-101 312
Msa0457760 AT1G75940.1 40.416 433 215 8 56 454 97 520 4.59e-101 312
Msa0457760 AT3G62750.2 35.728 515 225 11 5 451 23 499 2.42e-100 310
Msa0457760 AT3G62750.1 35.827 508 220 11 12 451 4 473 4.33e-100 308
Msa0457760 AT3G09260.1 40.930 430 212 8 56 454 95 513 2.40e-99 307
Msa0457760 AT1G45191.4 37.161 479 212 8 38 451 29 483 2.61e-99 307
Msa0457760 AT5G25980.3 38.248 468 207 9 1 398 12 467 3.49e-99 305
Msa0457760 AT5G25980.1 38.248 468 207 9 1 398 12 467 3.49e-99 305
Msa0457760 AT1G45191.2 35.918 490 209 7 38 451 29 489 2.54e-98 304
Msa0457760 AT3G03640.1 38.657 432 219 7 56 453 95 514 6.79e-98 304
Msa0457760 AT1G45191.6 36.268 477 230 8 38 451 29 494 8.95e-98 303
Msa0457760 AT1G66280.1 39.767 430 216 7 56 454 96 513 3.36e-97 302
Msa0457760 AT1G45191.1 38.353 425 226 7 52 451 93 506 4.34e-97 302
Msa0457760 AT1G60090.2 35.417 480 223 8 38 451 24 482 1.69e-96 300
Msa0457760 AT1G66270.1 39.302 430 218 7 56 454 96 513 3.07e-96 299
Msa0457760 AT5G28510.1 34.156 527 256 10 9 454 6 522 8.32e-96 298
Msa0457760 AT1G66270.2 39.486 428 218 7 56 454 96 511 9.05e-96 298
Msa0457760 AT1G60090.1 34.979 486 224 8 38 451 24 489 2.28e-95 297
Msa0457760 AT2G44460.2 44.022 368 192 7 88 451 1 358 6.03e-95 293
Msa0457760 AT3G62750.6 38.425 419 197 9 63 451 1 388 4.58e-94 290
Msa0457760 AT3G62750.5 38.425 419 197 9 63 451 1 388 4.58e-94 290
Msa0457760 AT5G24540.2 37.037 459 212 6 9 397 3 454 9.27e-94 291
Msa0457760 AT3G18070.7 45.342 322 161 5 134 453 1 309 9.32e-93 283
Msa0457760 AT3G62740.1 34.545 495 222 9 29 451 14 478 1.10e-92 290
Msa0457760 AT1G61810.4 39.364 409 168 5 28 363 19 420 3.46e-92 286
Msa0457760 AT5G26000.2 36.831 467 215 8 1 398 1 456 1.29e-91 285
Msa0457760 AT2G44480.4 47.284 313 95 3 35 278 63 374 8.70e-91 281
Msa0457760 AT2G44470.1 36.490 433 191 7 38 397 29 450 2.03e-90 282
Msa0457760 AT3G60140.2 42.090 335 158 5 56 362 86 412 2.59e-87 274
Msa0457760 AT1G02850.3 37.046 413 158 6 38 362 26 424 3.50e-87 273
Msa0457760 AT5G48375.1 38.482 382 156 6 56 416 88 411 3.02e-86 271
Msa0457760 AT3G62750.4 34.989 463 196 10 5 400 23 447 9.40e-85 268
Msa0457760 AT3G18070.4 41.905 315 115 3 36 284 28 340 1.57e-80 254
Msa0457760 AT1G52400.2 38.889 378 179 8 56 397 99 460 1.15e-79 254
Msa0457760 AT3G62740.2 36.049 405 164 7 29 362 14 394 2.06e-79 253
Msa0457760 AT2G44470.2 39.514 329 127 5 38 296 29 355 2.06e-76 244
Msa0457760 AT3G62750.7 37.017 362 146 6 12 306 4 350 9.12e-76 241
Msa0457760 AT3G62750.8 37.017 362 146 6 12 306 4 350 9.12e-76 241
Msa0457760 AT3G62750.3 36.856 369 151 6 5 306 23 376 3.54e-75 242
Msa0457760 AT1G45191.5 36.872 358 151 4 38 320 29 386 7.34e-74 238
Msa0457760 AT3G18070.5 40.176 341 157 9 36 363 28 334 1.16e-73 235
Msa0457760 AT1G60270.1 41.522 289 137 4 52 313 77 360 1.48e-72 234
Msa0457760 AT1G45191.3 39.617 313 127 2 38 288 29 341 1.63e-72 234
Msa0457760 AT1G60270.2 41.727 278 130 4 63 313 1 273 2.04e-70 225
Msa0457760 AT3G18070.6 45.259 232 115 3 134 363 1 222 1.29e-63 206
Msa0457760 AT1G61810.2 40.780 282 95 3 28 237 19 300 1.62e-61 202
Msa0457760 AT5G16580.1 38.255 298 155 6 115 408 27 299 3.72e-59 196
Msa0457760 AT1G51490.1 37.618 319 146 10 56 344 78 373 6.90e-59 199
Msa0457760 AT3G06510.2 23.288 438 247 11 57 454 158 546 6.61e-17 84.0
Msa0457760 AT3G06510.1 23.077 429 225 11 57 454 158 512 2.96e-14 75.5

Find 105 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTTCCTTTGTGAATTT+TGG 0.030488 3_3:-52878039 None:intergenic
GCCCTTAAGCTTTATTTAAT+TGG 0.134073 3_3:-52882828 None:intergenic
TGATCATATTACCTGATATT+TGG 0.172492 3_3:-52877224 None:intergenic
ATATTTGGCCTTATACAATT+TGG 0.224460 3_3:-52877209 None:intergenic
ATAAAGATTATGAAAGAAAT+TGG 0.229099 3_3:+52875892 Msa0457760:CDS
CCTGTTTCATACACCATTAA+TGG 0.239205 3_3:+52877061 Msa0457760:CDS
AGCTCTTGAAGATGAATATA+AGG 0.279995 3_3:+52876806 Msa0457760:CDS
ACTTAAGCTTACACTACTTT+AGG 0.287213 3_3:-52876840 None:intergenic
TTCATATGTATTGAGATAAT+TGG 0.297420 3_3:+52882800 Msa0457760:three_prime_UTR
GCCTCCATGGTATCCATTAA+TGG 0.303144 3_3:-52877074 None:intergenic
TGAAGTAGGTCATGTTGATA+TGG 0.309455 3_3:-52878140 None:intergenic
CCTTCGTAACACTGTTTCAT+TGG 0.312599 3_3:+52876772 Msa0457760:CDS
TTCATAGTAGTGAGTAATTA+AGG 0.320997 3_3:-52877665 None:intergenic
TGATCCTAATACCATCTTTA+CGG 0.327105 3_3:-52881918 None:intergenic
CCGGTGTACATAACTGAAAA+TGG 0.328735 3_3:+52880675 Msa0457760:CDS
GCTTCAAGACATTTGGAGAT+AGG 0.339805 3_3:+52877011 Msa0457760:CDS
CCTGCAAAATAGGTCAGTTT+TGG 0.341796 3_3:+52882972 Msa0457760:three_prime_UTR
GTGCCATAGGCTCATCAAAA+AGG 0.358255 3_3:+52877628 Msa0457760:intron
TACCAATTAAATAAAGCTTA+AGG 0.360905 3_3:+52882826 Msa0457760:three_prime_UTR
GGATAGTGACCATATGTAAT+TGG 0.362632 3_3:-52877982 None:intergenic
AGAGAAAATCAGGAGGAAAA+AGG 0.365403 3_3:-52874546 None:intergenic
ACTCAAATTTGATCTTCATT+TGG 0.365745 3_3:+52882713 Msa0457760:exon
TAGCCCGTAAAGATGGTATT+AGG 0.367113 3_3:+52881914 Msa0457760:CDS
TCCAACATATTTAGAGCATC+TGG 0.370979 3_3:-52877110 None:intergenic
CACATGTTGTGATGCAGTTC+CGG 0.372703 3_3:-52874488 None:intergenic
GGTATTGGTCCCTGCAAAAT+AGG 0.376796 3_3:+52882962 Msa0457760:three_prime_UTR
CCAATTCCAAAGAGAAAATC+AGG 0.378563 3_3:-52874556 None:intergenic
TGCTGCAGCCAAATTGTATA+AGG 0.379528 3_3:+52877201 Msa0457760:CDS
CCATTAATGGTGTATGAAAC+AGG 0.390045 3_3:-52877061 None:intergenic
GCAGGCTACACGATACGATT+TGG 0.390192 3_3:+52882603 Msa0457760:CDS
AATTGGTTCTTCTGCTTACC+AGG 0.392026 3_3:+52874573 Msa0457760:CDS
TTTGTGATCGGCAACACTAT+TGG 0.400174 3_3:-52877695 None:intergenic
GTTCATACTTTACTGCTTGA+AGG 0.402290 3_3:-52881969 None:intergenic
GGAAGGACCTGTAGCTTTCA+TGG 0.405185 3_3:-52874422 None:intergenic
TGTCACTACTACTACAACTT+TGG 0.405256 3_3:+52874383 Msa0457760:five_prime_UTR
GATTATGAAAGAAATTGGTT+TGG 0.407666 3_3:+52875897 Msa0457760:CDS
AGTAGGCTAAAATATGGTAT+TGG 0.408530 3_3:+52882947 Msa0457760:three_prime_UTR
ACCAATTAAATAAAGCTTAA+GGG 0.410923 3_3:+52882827 Msa0457760:three_prime_UTR
TGGAGATAGGGTTAAGCATT+GGG 0.413839 3_3:+52877024 Msa0457760:CDS
GATCCTAATACCATCTTTAC+GGG 0.424683 3_3:-52881917 None:intergenic
TCTTTACGGGCTACGTTGAC+TGG 0.425906 3_3:-52881904 None:intergenic
ACAAACAATGATATCATCCT+TGG 0.426317 3_3:+52878005 Msa0457760:CDS
ATTGTATAAGGCCAAATATC+AGG 0.426496 3_3:+52877213 Msa0457760:CDS
CTTCAAGACATTTGGAGATA+GGG 0.430530 3_3:+52877012 Msa0457760:CDS
AAGGATGATATCATTGTTTG+TGG 0.430797 3_3:-52878003 None:intergenic
CTTCGTAACACTGTTTCATT+GGG 0.433323 3_3:+52876773 Msa0457760:CDS
TTTGCTCATCCAATTACATA+TGG 0.434508 3_3:+52877973 Msa0457760:CDS
ATTCACACCAAGAAAATCAT+AGG 0.436183 3_3:-52878079 None:intergenic
ACTATGCTGCTTCATTCAAT+AGG 0.440030 3_3:+52874521 Msa0457760:CDS
TATGTTGGAAATTGCTCTAC+TGG 0.447346 3_3:+52877124 Msa0457760:CDS
GCTCTTGAAGATGAATATAA+GGG 0.448342 3_3:+52876807 Msa0457760:CDS
ATGAAGAATGGTGTAGCTAT+TGG 0.450804 3_3:+52878311 Msa0457760:CDS
TCGGCAACACTATTGGAATA+TGG 0.458003 3_3:-52877688 None:intergenic
TCCATAAATACTTACGAATG+AGG 0.464054 3_3:-52878179 None:intergenic
TTGGAGATAGGGTTAAGCAT+TGG 0.464172 3_3:+52877023 Msa0457760:CDS
TTTCAGGTGTTGGTCAATCA+AGG 0.465042 3_3:+52881869 Msa0457760:intron
ACGATTTGGAATAATTTATG+TGG 0.466735 3_3:+52882617 Msa0457760:CDS
TTGTGCAGACGGATTTGAAT+TGG 0.470407 3_3:+52880586 Msa0457760:intron
GGAATTTGAGATGGCTATCA+TGG 0.493604 3_3:-52881945 None:intergenic
GCCAGATGCTCTAAATATGT+TGG 0.497289 3_3:+52877109 Msa0457760:CDS
AAGTGATGAGCAACAATGTA+GGG 0.499808 3_3:-52877163 None:intergenic
TGAATGCAAGTAACATACTA+AGG 0.504746 3_3:-52882781 None:intergenic
GCTGCAAAAGTTCCTTCTCA+AGG 0.507675 3_3:+52882686 Msa0457760:CDS
TTGACCACAGCAATGAAGAA+TGG 0.509388 3_3:+52878299 Msa0457760:CDS
GTCAACGTAGCCCGTAAAGA+TGG 0.512028 3_3:+52881907 Msa0457760:CDS
TATTCATCTTCAAGAGCTTG+TGG 0.514988 3_3:-52876801 None:intergenic
GAAGAATTTAAAATTATCAA+AGG 0.521384 3_3:+52878054 Msa0457760:CDS
TGGTGTAGCTATTGGCTCCT+CGG 0.529880 3_3:+52878319 Msa0457760:CDS
TCTACTTGCAGCTTTGTGAT+CGG 0.532372 3_3:-52877707 None:intergenic
GATAGCTATGAATGGGATGC+AGG 0.533103 3_3:+52882585 Msa0457760:CDS
TCTGCAGCCATGAAAGCTAC+AGG 0.533465 3_3:+52874415 Msa0457760:exon
CAAACAATGATATCATCCTT+GGG 0.536800 3_3:+52878006 Msa0457760:CDS
TGCATCCCATTCATAGCTAT+CGG 0.537019 3_3:-52882583 None:intergenic
TGCTTGCATATCAGTGAAGT+AGG 0.537710 3_3:-52878154 None:intergenic
ATTTGAGTTATCCCTTGAGA+AGG 0.539367 3_3:-52882698 None:intergenic
GTCATGTTGATATGGGTTGG+TGG 0.541020 3_3:-52878132 None:intergenic
CAGGTGGAGAAGTGCCTCCA+TGG 0.544070 3_3:-52877087 None:intergenic
GTAACATACTAAGGTGACAT+TGG 0.547315 3_3:-52882772 None:intergenic
AAAGTGATGAGCAACAATGT+AGG 0.552733 3_3:-52877164 None:intergenic
GAAGTAGGTCATGTTGATAT+GGG 0.560351 3_3:-52878139 None:intergenic
ACAAGATGATGAATTCCCTT+CGG 0.561063 3_3:-52880621 None:intergenic
GAATATTCTTGACCATGAGA+TGG 0.567125 3_3:-52875935 None:intergenic
TACACCATTCTTCATTGCTG+TGG 0.567568 3_3:-52878303 None:intergenic
CTTGAAGGAGGAATTTGAGA+TGG 0.568650 3_3:-52881954 None:intergenic
ACATATTTAGAGCATCTGGC+AGG 0.577817 3_3:-52877106 None:intergenic
ATGTGAAGGGCTACTATGCA+TGG 0.578020 3_3:+52882553 Msa0457760:CDS
CTGCAAAAGTTCCTTCTCAA+GGG 0.584964 3_3:+52882687 Msa0457760:CDS
CTTGAAGCAAAAGTCTGCAT+AGG 0.590277 3_3:-52876996 None:intergenic
CATACAGATTCTCCATCTCA+TGG 0.592212 3_3:+52875923 Msa0457760:CDS
TACACCATTAATGGATACCA+TGG 0.597109 3_3:+52877070 Msa0457760:CDS
CATACTTTACTGCTTGAAGG+AGG 0.601828 3_3:-52881966 None:intergenic
CAGAGATGGTGCAAATGTGA+AGG 0.608155 3_3:+52882539 Msa0457760:intron
TAGGTCATGTTGATATGGGT+TGG 0.611086 3_3:-52878135 None:intergenic
TTGGCTATACGTCTATCCGA+AGG 0.613872 3_3:+52880605 Msa0457760:CDS
TATTTAGAGCATCTGGCAGG+TGG 0.615635 3_3:-52877103 None:intergenic
AATGAAGCAGCATAGTGACT+TGG 0.621907 3_3:-52874514 None:intergenic
CAATGAAACAGTGTTACGAA+GGG 0.642383 3_3:-52876771 None:intergenic
TGGCTATACGTCTATCCGAA+GGG 0.650376 3_3:+52880606 Msa0457760:CDS
CCAATGAAACAGTGTTACGA+AGG 0.651781 3_3:-52876772 None:intergenic
AATGCTTTGTGCATAATATG+TGG 0.655668 3_3:-52878109 None:intergenic
AGATACATACAAGAATCCAC+CGG 0.670477 3_3:+52880656 Msa0457760:CDS
CAGACTCCCAAAATTCACAA+AGG 0.677592 3_3:+52878032 Msa0457760:CDS
AGAGATGGTGCAAATGTGAA+GGG 0.682450 3_3:+52882540 Msa0457760:intron
ACCATTAATGGATACCATGG+AGG 0.695140 3_3:+52877073 Msa0457760:CDS
ATTCCAAAGAGAAAATCAGG+AGG 0.702676 3_3:-52874553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTATTAATTTTTTTA+TGG - chr3_3:52875777-52875796 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr3_3:52878943-52878962 Msa0457760:intron 0.0%
!! TATATATATATATATATATA+GGG + chr3_3:52878980-52878999 Msa0457760:intron 0.0%
!! TATATATATATATATATATA+GGG - chr3_3:52878980-52878999 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr3_3:52878943-52878962 None:intergenic 0.0%
!! TTCAAAAAAAAAAAAATGAT+AGG + chr3_3:52875352-52875371 Msa0457760:intron 10.0%
!! ATGGTAAAATAAAATATTTA+TGG - chr3_3:52875758-52875777 None:intergenic 10.0%
!! ATTAATAAATATATTGAACT+AGG + chr3_3:52875784-52875803 Msa0457760:intron 10.0%
!! TTAATAAATATATTGAACTA+GGG + chr3_3:52875785-52875804 Msa0457760:intron 10.0%
!! ATTAATAAATATATTGAACT+AGG + chr3_3:52875784-52875803 Msa0457760:intron 10.0%
!! TTAATAAATATATTGAACTA+GGG + chr3_3:52875785-52875804 Msa0457760:intron 10.0%
!!! AATATTTAACTTGATTAATA+AGG + chr3_3:52875985-52876004 Msa0457760:intron 10.0%
!! ACCAAAAAAAAAAAAAAAAA+AGG + chr3_3:52876022-52876041 Msa0457760:intron 10.0%
!! ATTTAAATAGTAACTATATA+AGG - chr3_3:52876364-52876383 None:intergenic 10.0%
!!! TAAATGATCTATTTTTTAAT+TGG + chr3_3:52876379-52876398 Msa0457760:intron 10.0%
!!! AAATGATCTATTTTTTAATT+GGG + chr3_3:52876380-52876399 Msa0457760:intron 10.0%
!! AAATAAAATAATTACAAAAG+GGG - chr3_3:52876677-52876696 None:intergenic 10.0%
!!! TTTATTTTATTTTTGCAATA+GGG - chr3_3:52876870-52876889 None:intergenic 10.0%
!!! ATTTATTTTATTTTTGCAAT+AGG - chr3_3:52876871-52876890 None:intergenic 10.0%
!! CTTAATTTAATGAATAAAAT+AGG + chr3_3:52876960-52876979 Msa0457760:intron 10.0%
!!! AAAATAAACATTGATTTTTT+TGG + chr3_3:52877913-52877932 Msa0457760:intron 10.0%
!! TAATCCATATATATATATAT+AGG + chr3_3:52879202-52879221 Msa0457760:intron 10.0%
!! AATCCATATATATATATATA+GGG + chr3_3:52879203-52879222 Msa0457760:intron 10.0%
!! TATATATATATATATATAGG+GGG - chr3_3:52879000-52879019 None:intergenic 10.0%
!! ATATATATATATATTTACCA+AGG + chr3_3:52880051-52880070 Msa0457760:intron 10.0%
!! TATTTATAATAGAAAAACAT+GGG - chr3_3:52880119-52880138 None:intergenic 10.0%
!! TTATTTATAATAGAAAAACA+TGG - chr3_3:52880120-52880139 None:intergenic 10.0%
!!! TTTATTAAGATTTTTTTTTG+AGG - chr3_3:52882127-52882146 None:intergenic 10.0%
!!! AAATTGAGTTTATAATATTT+TGG - chr3_3:52882152-52882171 None:intergenic 10.0%
!!! CTTTCAAATTCAATATTTTA+GGG - chr3_3:52875289-52875308 None:intergenic 15.0%
!!! TCTTTCAAATTCAATATTTT+AGG - chr3_3:52875290-52875309 None:intergenic 15.0%
!! TGAATTTGAAAGAAAAAAAA+TGG + chr3_3:52875297-52875316 Msa0457760:intron 15.0%
!! ATAAAGATTATGAAAGAAAT+TGG + chr3_3:52875892-52875911 Msa0457760:CDS 15.0%
!!! TTTTTTTTTTTTTGGTACAA+GGG - chr3_3:52876018-52876037 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGGTACA+AGG - chr3_3:52876019-52876038 None:intergenic 15.0%
!!! GCCTTTTTTTTTTTTTTTTT+TGG - chr3_3:52876026-52876045 None:intergenic 15.0%
!!! GAAATATTACAAGATTTTTA+CGG + chr3_3:52876082-52876101 Msa0457760:intron 15.0%
!!! AATGATCTATTTTTTAATTG+GGG + chr3_3:52876381-52876400 Msa0457760:intron 15.0%
!!! TATAAAAAATTTAGTTCACA+TGG - chr3_3:52876730-52876749 None:intergenic 15.0%
!!! TAAATTTTTTATATATACGG+TGG + chr3_3:52876737-52876756 Msa0457760:intron 15.0%
!! ATTTAATGAATAAAATAGGA+AGG + chr3_3:52876964-52876983 Msa0457760:intron 15.0%
!!! CACTATAAATACATTTTTTA+AGG - chr3_3:52877565-52877584 None:intergenic 15.0%
!! AAGAATAAGAAGATTATTAT+TGG + chr3_3:52877803-52877822 Msa0457760:intron 15.0%
!!! CAATGTTTATTTTCATAAAA+CGG - chr3_3:52877906-52877925 None:intergenic 15.0%
!!! GAACTTAATATTTATTTTTC+AGG + chr3_3:52877950-52877969 Msa0457760:intron 15.0%
!!! GAAGAATTTAAAATTATCAA+AGG + chr3_3:52878054-52878073 Msa0457760:CDS 15.0%
!! AGCCATTATATAAAAAAAAT+CGG + chr3_3:52878220-52878239 Msa0457760:intron 15.0%
!!! AACCGATTTTTTTTATATAA+TGG - chr3_3:52878225-52878244 None:intergenic 15.0%
!! ATCCATATATATATATATAG+GGG + chr3_3:52879204-52879223 Msa0457760:intron 15.0%
!! AAAACATATAAAAATTAGAG+TGG - chr3_3:52879680-52879699 None:intergenic 15.0%
!! TGTTTATAATAGAAAACATT+GGG - chr3_3:52880365-52880384 None:intergenic 15.0%
!! TTGTTTATAATAGAAAACAT+TGG - chr3_3:52880366-52880385 None:intergenic 15.0%
!!! TATATTATTTGTTGTGAATT+AGG + chr3_3:52880950-52880969 Msa0457760:intron 15.0%
!! ATATTAATCAATTAACTCTT+AGG + chr3_3:52881670-52881689 Msa0457760:intron 15.0%
!! AATATAGTGAAATAGAATTA+GGG - chr3_3:52882060-52882079 None:intergenic 15.0%
!! TAATATAGTGAAATAGAATT+AGG - chr3_3:52882061-52882080 None:intergenic 15.0%
!!! TTATAAACTCAATTTTTTGT+TGG + chr3_3:52882157-52882176 Msa0457760:intron 15.0%
!! TGTTTATTTAAGAGTTTAAA+GGG - chr3_3:52882455-52882474 None:intergenic 15.0%
!! TTGTTTATTTAAGAGTTTAA+AGG - chr3_3:52882456-52882475 None:intergenic 15.0%
!! TAATCAATAAATTCTTTCTA+AGG - chr3_3:52882495-52882514 None:intergenic 15.0%
!!! TAGAAAGAATTTATTGATTA+TGG + chr3_3:52882495-52882514 Msa0457760:intron 15.0%
!! AAACTATAAAAAAAATTGCA+GGG - chr3_3:52883005-52883024 None:intergenic 15.0%
!! AAAACTATAAAAAAAATTGC+AGG - chr3_3:52883006-52883025 None:intergenic 15.0%
!!! GCAATTTTTTTTATAGTTTT+TGG + chr3_3:52883006-52883025 Msa0457760:three_prime_UTR 15.0%
!! AACTATAAAAAAAATTTGCA+AGG - chr3_3:52883065-52883084 None:intergenic 15.0%
!! ACAAGCAAAATAAATTTAGT+GGG - chr3_3:52874645-52874664 None:intergenic 20.0%
!! AACAAGCAAAATAAATTTAG+TGG - chr3_3:52874646-52874665 None:intergenic 20.0%
!!! TTTTCAAAAAGGACTAAAAT+AGG + chr3_3:52874762-52874781 Msa0457760:intron 20.0%
!! AATACTTACAAAATTAGCAT+AGG - chr3_3:52874851-52874870 None:intergenic 20.0%
!! ATTTGAAAGAAAAAAAATGG+AGG + chr3_3:52875300-52875319 Msa0457760:intron 20.0%
!! AATAAATTATTAGAGTAACC+TGG - chr3_3:52875489-52875508 None:intergenic 20.0%
!!! TTTTCTTCAAAAGACAAAAA+CGG - chr3_3:52875725-52875744 None:intergenic 20.0%
!! TGAATATTCTTATCTTACTT+GGG - chr3_3:52875960-52875979 None:intergenic 20.0%
!! CAATTGATGAAATTTATGTT+TGG + chr3_3:52877606-52877625 Msa0457760:intron 20.0%
!!! TATATAATGGCTTATTTTAC+TGG - chr3_3:52878212-52878231 None:intergenic 20.0%
!! TTAATAGCTATATTATGATG+CGG + chr3_3:52878509-52878528 Msa0457760:intron 20.0%
!! TCCATATATATATATATAGG+GGG + chr3_3:52879205-52879224 Msa0457760:intron 20.0%
!!! TTTTTATATGTTTTTGCAAC+TGG + chr3_3:52879686-52879705 Msa0457760:intron 20.0%
!! TAAAGTTTAATAGAGACAAA+AGG + chr3_3:52880182-52880201 Msa0457760:intron 20.0%
!! AAAGTTTAATAGAGACAAAA+GGG + chr3_3:52880183-52880202 Msa0457760:intron 20.0%
!! AAAGTTTAATAGAGACAAAA+TGG + chr3_3:52880183-52880202 Msa0457760:intron 20.0%
!! CAATGCTAAATAATGAAAAA+AGG - chr3_3:52880721-52880740 None:intergenic 20.0%
!!! TTTTTCATTATTTAGCATTG+AGG + chr3_3:52880721-52880740 Msa0457760:intron 20.0%
!! AACAAACTTAGATCTAATAT+AGG + chr3_3:52881045-52881064 Msa0457760:intron 20.0%
!! GTTTATTTAAGAGTTTAAAG+GGG - chr3_3:52882454-52882473 None:intergenic 20.0%
!! TTCATATGTATTGAGATAAT+TGG + chr3_3:52882800-52882819 Msa0457760:three_prime_UTR 20.0%
!! TACCAATTAAATAAAGCTTA+AGG + chr3_3:52882826-52882845 Msa0457760:three_prime_UTR 20.0%
!! ACCAATTAAATAAAGCTTAA+GGG + chr3_3:52882827-52882846 Msa0457760:three_prime_UTR 20.0%
!! TGATTTTTATCATCGATACA+AGG + chr3_3:52875677-52875696 Msa0457760:intron 25.0%
! GATTATGAAAGAAATTGGTT+TGG + chr3_3:52875897-52875916 Msa0457760:CDS 25.0%
! GTGAATATTCTTATCTTACT+TGG - chr3_3:52875961-52875980 None:intergenic 25.0%
! CTACAATAATGTCATTAATG+AGG + chr3_3:52876319-52876338 Msa0457760:intron 25.0%
!!! ATATTTGGCCTTATACAATT+TGG - chr3_3:52877212-52877231 None:intergenic 25.0%
! TGATCATATTACCTGATATT+TGG - chr3_3:52877227-52877246 None:intergenic 25.0%
!!! AACACAACCACTTTTTAATT+CGG - chr3_3:52877459-52877478 None:intergenic 25.0%
! TTCATAGTAGTGAGTAATTA+AGG - chr3_3:52877668-52877687 None:intergenic 25.0%
!! ATTCTTCCTTTGTGAATTTT+GGG - chr3_3:52878041-52878060 None:intergenic 25.0%
!! AATTCTTCCTTTGTGAATTT+TGG - chr3_3:52878042-52878061 None:intergenic 25.0%
! GCTATATGACATGAAAAATT+TGG - chr3_3:52878427-52878446 None:intergenic 25.0%
! TTGATTAAAAATCTGCTTCA+AGG + chr3_3:52878624-52878643 Msa0457760:intron 25.0%
! GATAAATTAGAGCAATAAAC+AGG + chr3_3:52878651-52878670 Msa0457760:intron 25.0%
!!! TTGTTTTACAAGATGTTTGA+TGG - chr3_3:52878774-52878793 None:intergenic 25.0%
! AAAGTGAAAATCACACATTA+AGG - chr3_3:52879069-52879088 None:intergenic 25.0%
! ATAAAAGACACCTTCATAAA+AGG + chr3_3:52879167-52879186 Msa0457760:intron 25.0%
! TTGTATCATTATGGAAACTA+GGG - chr3_3:52879547-52879566 None:intergenic 25.0%
! TTTGTATCATTATGGAAACT+AGG - chr3_3:52879548-52879567 None:intergenic 25.0%
! TAGTTTCCATAATGATACAA+AGG + chr3_3:52879547-52879566 Msa0457760:intron 25.0%
! AGTTTCCATAATGATACAAA+GGG + chr3_3:52879548-52879567 Msa0457760:intron 25.0%
! GATTAAAACACAACTTAAGT+TGG - chr3_3:52879929-52879948 None:intergenic 25.0%
! ATCCATTGGATTAAAAACAA+GGG - chr3_3:52879956-52879975 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG - chr3_3:52880096-52880115 None:intergenic 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG + chr3_3:52880206-52880225 Msa0457760:intron 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG - chr3_3:52880096-52880115 None:intergenic 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG + chr3_3:52880206-52880225 Msa0457760:intron 25.0%
!! CAAAGCATTATATGTATATG+GGG - chr3_3:52880530-52880549 None:intergenic 25.0%
!! CCAAAGCATTATATGTATAT+GGG - chr3_3:52880531-52880550 None:intergenic 25.0%
! CCATATACATATAATGCTTT+GGG + chr3_3:52880529-52880548 Msa0457760:intron 25.0%
! TTTCTTCACTAAGTATCAAA+TGG - chr3_3:52880555-52880574 None:intergenic 25.0%
! CTTAGTGAAGAAAAAGTTTA+TGG + chr3_3:52880562-52880581 Msa0457760:intron 25.0%
! TTGAGGAGTAATTGTATATT+AGG + chr3_3:52880738-52880757 Msa0457760:intron 25.0%
! ACTCAATTAATTGATTGCAT+AGG - chr3_3:52880841-52880860 None:intergenic 25.0%
!!! CATAGTTTTGATGCTTAATT+TGG - chr3_3:52880886-52880905 None:intergenic 25.0%
! CAAATTAAGCATCAAAACTA+TGG + chr3_3:52880884-52880903 Msa0457760:intron 25.0%
! TTATGTAAGTATGTCCATTA+GGG - chr3_3:52880915-52880934 None:intergenic 25.0%
!! CTCTATTTATCTTTTACTTG+TGG - chr3_3:52881092-52881111 None:intergenic 25.0%
! CTTTACAAAGAGATACAAAA+AGG + chr3_3:52881209-52881228 Msa0457760:intron 25.0%
! AAAACATTTGTAAACACCTT+GGG - chr3_3:52881336-52881355 None:intergenic 25.0%
!! TAAAAATCATAGCACGATTT+TGG - chr3_3:52881532-52881551 None:intergenic 25.0%
!!! GAGTCAAATTTTTGAAGTTT+GGG - chr3_3:52881628-52881647 None:intergenic 25.0%
!!! TGAGTCAAATTTTTGAAGTT+TGG - chr3_3:52881629-52881648 None:intergenic 25.0%
! CAATTAACTCTTAGGAAAAT+AGG + chr3_3:52881678-52881697 Msa0457760:intron 25.0%
!!! GTTAGCTAGATGTATTTTTA+TGG - chr3_3:52881776-52881795 None:intergenic 25.0%
! GAATTGATCTCATAATTAAC+AGG - chr3_3:52882321-52882340 None:intergenic 25.0%
! GAGTAGGAAGTAAAATATTA+GGG + chr3_3:52882343-52882362 Msa0457760:intron 25.0%
!! ACGATTTGGAATAATTTATG+TGG + chr3_3:52882617-52882636 Msa0457760:CDS 25.0%
! ACTCAAATTTGATCTTCATT+TGG + chr3_3:52882713-52882732 Msa0457760:exon 25.0%
!!! AGATTTTCCTTTGTTGTTTT+TGG + chr3_3:52882744-52882763 Msa0457760:three_prime_UTR 25.0%
!!! TCTTTAACAACTCTCTTTTT+TGG + chr3_3:52882910-52882929 Msa0457760:three_prime_UTR 25.0%
!!! CTTTAACAACTCTCTTTTTT+GGG + chr3_3:52882911-52882930 Msa0457760:three_prime_UTR 25.0%
!!! GTTTTTAGTAGGCTAAAATA+TGG + chr3_3:52882941-52882960 Msa0457760:three_prime_UTR 25.0%
ATGCATTGTTGCTAATAATG+TGG - chr3_3:52874608-52874627 None:intergenic 30.0%
ATTTAGTGGGAAGTCAATAA+TGG - chr3_3:52874632-52874651 None:intergenic 30.0%
TTATACATAGCTCGTCATAA+AGG + chr3_3:52874665-52874684 Msa0457760:intron 30.0%
! CGCAACATTTCTTTTCAAAA+AGG + chr3_3:52874751-52874770 Msa0457760:intron 30.0%
AATACTTTGACATTGTTGTC+AGG + chr3_3:52874883-52874902 Msa0457760:intron 30.0%
ATACTTTGACATTGTTGTCA+GGG + chr3_3:52874884-52874903 Msa0457760:intron 30.0%
ATAGAACACTTCAAATCTCA+GGG - chr3_3:52874915-52874934 None:intergenic 30.0%
TTGATGCCTCAAAAAATATG+AGG + chr3_3:52875055-52875074 Msa0457760:intron 30.0%
ATATATGCAGTAACCAATGA+CGG - chr3_3:52875118-52875137 None:intergenic 30.0%
CTCAGTAGAAAAAAAAGAAG+AGG + chr3_3:52875243-52875262 Msa0457760:intron 30.0%
GAAAAAAAATGGAGGAAAGT+TGG + chr3_3:52875308-52875327 Msa0457760:intron 30.0%
CTGAAAAATTTGCACAAACA+AGG - chr3_3:52875400-52875419 None:intergenic 30.0%
! CTTGTTTGTGCAAATTTTTC+AGG + chr3_3:52875398-52875417 Msa0457760:intron 30.0%
AAGGAGCTTCAAATATAGAT+GGG + chr3_3:52875424-52875443 Msa0457760:intron 30.0%
TTGATTGAGCAGAAAAGATT+GGG + chr3_3:52875628-52875647 Msa0457760:intron 30.0%
! ATTCTTTTGCCACTATATGA+TGG + chr3_3:52876126-52876145 Msa0457760:intron 30.0%
TCTCTTAATCCATCATATAG+TGG - chr3_3:52876138-52876157 None:intergenic 30.0%
!! CTATATGATGGATTAAGAGA+CGG + chr3_3:52876138-52876157 Msa0457760:intron 30.0%
TTGTAGAATTTAACTCCCAT+AGG - chr3_3:52876305-52876324 None:intergenic 30.0%
TAAGGTTTATACCATTTGCT+AGG - chr3_3:52876346-52876365 None:intergenic 30.0%
TTGCAATTTCTCTTCATTCA+GGG - chr3_3:52876454-52876473 None:intergenic 30.0%
TTTGCAATTTCTCTTCATTC+AGG - chr3_3:52876455-52876474 None:intergenic 30.0%
ACTAACAAAGTTTGCATTCA+GGG + chr3_3:52876543-52876562 Msa0457760:intron 30.0%
ACTAACAAAGTCTACATTCA+GGG + chr3_3:52876575-52876594 Msa0457760:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG + chr3_3:52876603-52876622 Msa0457760:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + chr3_3:52876604-52876623 Msa0457760:intron 30.0%
!!! TTTTTTATATATACGGTGGC+AGG + chr3_3:52876741-52876760 Msa0457760:intron 30.0%
AGCTCTTGAAGATGAATATA+AGG + chr3_3:52876806-52876825 Msa0457760:CDS 30.0%
GCTCTTGAAGATGAATATAA+GGG + chr3_3:52876807-52876826 Msa0457760:CDS 30.0%
ACTTAAGCTTACACTACTTT+AGG - chr3_3:52876843-52876862 None:intergenic 30.0%
ATTGTATAAGGCCAAATATC+AGG + chr3_3:52877213-52877232 Msa0457760:CDS 30.0%
GATCAAACCGAATTAAAAAG+TGG + chr3_3:52877449-52877468 Msa0457760:intron 30.0%
!!! TATCACTCGACATTTTTTAG+TGG - chr3_3:52877487-52877506 None:intergenic 30.0%
!! AAATTTATGTTTGGTGCCAT+AGG + chr3_3:52877615-52877634 Msa0457760:intron 30.0%
GCTCATCAAAAAGGAAAAAT+TGG + chr3_3:52877637-52877656 Msa0457760:CDS 30.0%
!! AGAGCACTTGACTTTTTATT+TGG + chr3_3:52877727-52877746 Msa0457760:CDS 30.0%
!! CACTTGACTTTTTATTTGGA+TGG + chr3_3:52877731-52877750 Msa0457760:CDS 30.0%
TTTGCTCATCCAATTACATA+TGG + chr3_3:52877973-52877992 Msa0457760:CDS 30.0%
AAGGATGATATCATTGTTTG+TGG - chr3_3:52878006-52878025 None:intergenic 30.0%
ACAAACAATGATATCATCCT+TGG + chr3_3:52878005-52878024 Msa0457760:CDS 30.0%
CAAACAATGATATCATCCTT+GGG + chr3_3:52878006-52878025 Msa0457760:CDS 30.0%
! AAAGGTTCCTATGATTTTCT+TGG + chr3_3:52878072-52878091 Msa0457760:CDS 30.0%
ATTCACACCAAGAAAATCAT+AGG - chr3_3:52878082-52878101 None:intergenic 30.0%
AATGCTTTGTGCATAATATG+TGG - chr3_3:52878112-52878131 None:intergenic 30.0%
ACCTCATTCGTAAGTATTTA+TGG + chr3_3:52878178-52878197 Msa0457760:intron 30.0%
TCCATAAATACTTACGAATG+AGG - chr3_3:52878182-52878201 None:intergenic 30.0%
AAAAATAGAAGATCATACCG+AGG - chr3_3:52878339-52878358 None:intergenic 30.0%
!!! GGTATGATCTTCTATTTTTG+TGG + chr3_3:52878340-52878359 Msa0457760:intron 30.0%
!!! TCTGTATGTGTTGTTTTTCT+TGG + chr3_3:52878368-52878387 Msa0457760:intron 30.0%
!!! TTGGCTTCTTTGTTTTTGTT+TGG + chr3_3:52878387-52878406 Msa0457760:intron 30.0%
GCTATTAATTGTAGCTTCAT+AGG - chr3_3:52878497-52878516 None:intergenic 30.0%
! GATGTCTTTTAAACCTCTAT+TGG + chr3_3:52878549-52878568 Msa0457760:intron 30.0%
! TGATGGACAAAATGTAAGTT+TGG - chr3_3:52878757-52878776 None:intergenic 30.0%
! GAAGTTGATTCCATGATATA+GGG - chr3_3:52878875-52878894 None:intergenic 30.0%
! TGAAGTTGATTCCATGATAT+AGG - chr3_3:52878876-52878895 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr3_3:52879111-52879130 Msa0457760:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG - chr3_3:52879117-52879136 None:intergenic 30.0%
! ATTGAAGACACCTTTTATGA+AGG - chr3_3:52879180-52879199 None:intergenic 30.0%
GCCCCCTATATATATATATA+TGG - chr3_3:52880026-52880045 None:intergenic 30.0%
ATTGCATGCATTGGATTAAA+AGG + chr3_3:52879265-52879284 Msa0457760:intron 30.0%
TGAAGAAAGAAGGAAAGAAT+TGG - chr3_3:52879340-52879359 None:intergenic 30.0%
TTAAAACGTGTGAAGAAAGA+AGG - chr3_3:52879350-52879369 None:intergenic 30.0%
GTTTCCATAATGATACAAAG+GGG + chr3_3:52879549-52879568 Msa0457760:intron 30.0%
TTTCCATAATGATACAAAGG+GGG + chr3_3:52879550-52879569 Msa0457760:intron 30.0%
TGGATGCTGAAAAGATTTAA+GGG - chr3_3:52879660-52879679 None:intergenic 30.0%
!!! ATCCCTTGTTTTTAATCCAA+TGG + chr3_3:52879951-52879970 Msa0457760:intron 30.0%
CATCCATTGGATTAAAAACA+AGG - chr3_3:52879957-52879976 None:intergenic 30.0%
! ATGACTTTTGTATGTGAGAA+TGG - chr3_3:52879993-52880012 None:intergenic 30.0%
! ATAGAAAAACATGGGTGTTT+TGG - chr3_3:52880111-52880130 None:intergenic 30.0%
! ATAGAAAACATTGGGTGTTT+TGG - chr3_3:52880357-52880376 None:intergenic 30.0%
CCCATATACATATAATGCTT+TGG + chr3_3:52880528-52880547 Msa0457760:intron 30.0%
! CCCAAAGCATTATATGTATA+TGG - chr3_3:52880532-52880551 None:intergenic 30.0%
ACTCTACAAGAATTTGAACA+TGG - chr3_3:52880805-52880824 None:intergenic 30.0%
GTTATGTAAGTATGTCCATT+AGG - chr3_3:52880916-52880935 None:intergenic 30.0%
CTTCACACGTCTAAATTTAT+TGG - chr3_3:52880989-52881008 None:intergenic 30.0%
CAAGAAATGTTTACCCAATT+CGG + chr3_3:52881129-52881148 Msa0457760:intron 30.0%
! ACTTGTTGAAGCTAATTTCT+TGG - chr3_3:52881237-52881256 None:intergenic 30.0%
! GTAGAAATTAGGTTTGTTCT+TGG - chr3_3:52881263-52881282 None:intergenic 30.0%
GAAAACATTTGTAAACACCT+TGG - chr3_3:52881337-52881356 None:intergenic 30.0%
AAATCAAAGGAGGTAACTTT+AGG - chr3_3:52881407-52881426 None:intergenic 30.0%
!! TTGTTTTGTGAATACGTTTC+AGG + chr3_3:52881853-52881872 Msa0457760:intron 30.0%
TGATCCTAATACCATCTTTA+CGG - chr3_3:52881921-52881940 None:intergenic 30.0%
TAGGGAAACTTGTAAATCTA+GGG - chr3_3:52882042-52882061 None:intergenic 30.0%
TTAGGGAAACTTGTAAATCT+AGG - chr3_3:52882043-52882062 None:intergenic 30.0%
TTCAAAGAGTCTAATCTACA+AGG - chr3_3:52882298-52882317 None:intergenic 30.0%
CGAGTAGGAAGTAAAATATT+AGG + chr3_3:52882342-52882361 Msa0457760:intron 30.0%
! ATTTTCCGATAGCTATGAAT+GGG + chr3_3:52882578-52882597 Msa0457760:CDS 30.0%
GGAAATTCCAAAAACAACAA+AGG - chr3_3:52882754-52882773 None:intergenic 30.0%
TGAATGCAAGTAACATACTA+AGG - chr3_3:52882784-52882803 None:intergenic 30.0%
!! GCCCTTAAGCTTTATTTAAT+TGG - chr3_3:52882831-52882850 None:intergenic 30.0%
AGTAGGCTAAAATATGGTAT+TGG + chr3_3:52882947-52882966 Msa0457760:three_prime_UTR 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG - chr3_3:52883033-52883052 None:intergenic 30.0%
TGTCACTACTACTACAACTT+TGG + chr3_3:52874383-52874402 Msa0457760:five_prime_UTR 35.0%
CAGAGAAAAAAGATAGAGGA+GGG - chr3_3:52874446-52874465 None:intergenic 35.0%
TAGCCAGAGAAAAAAGATAG+AGG - chr3_3:52874450-52874469 None:intergenic 35.0%
! ACTATGCTGCTTCATTCAAT+AGG + chr3_3:52874521-52874540 Msa0457760:CDS 35.0%
AGAGAAAATCAGGAGGAAAA+AGG - chr3_3:52874549-52874568 None:intergenic 35.0%
! TTTCCTCCTGATTTTCTCTT+TGG + chr3_3:52874550-52874569 Msa0457760:CDS 35.0%
ATTCCAAAGAGAAAATCAGG+AGG - chr3_3:52874556-52874575 None:intergenic 35.0%
CCAATTCCAAAGAGAAAATC+AGG - chr3_3:52874559-52874578 None:intergenic 35.0%
!!! CCTGATTTTCTCTTTGGAAT+TGG + chr3_3:52874556-52874575 Msa0457760:CDS 35.0%
CATTGTTGCTAATAATGTGG+TGG - chr3_3:52874605-52874624 None:intergenic 35.0%
TAAAACGACATCGAAAACAC+CGG - chr3_3:52874702-52874721 None:intergenic 35.0%
CATAGAACACTTCAAATCTC+AGG - chr3_3:52874916-52874935 None:intergenic 35.0%
!!! TTTTTGAGGCATCAAGTCAT+TGG - chr3_3:52875050-52875069 None:intergenic 35.0%
GTCTTGAGCATGTTTACAAT+AGG - chr3_3:52875096-52875115 None:intergenic 35.0%
TGTCACTATGTGTATTGTGT+TGG + chr3_3:52875165-52875184 Msa0457760:intron 35.0%
ATTTGTCAACATGTGTACCT+TGG + chr3_3:52875211-52875230 Msa0457760:intron 35.0%
! AAATGGAGGAAAGTTGGTTA+AGG + chr3_3:52875314-52875333 Msa0457760:intron 35.0%
! AATGGAGGAAAGTTGGTTAA+GGG + chr3_3:52875315-52875334 Msa0457760:intron 35.0%
!!! GTGCAAATTTTTCAGGTAGA+AGG + chr3_3:52875405-52875424 Msa0457760:intron 35.0%
GAAGGAGCTTCAAATATAGA+TGG + chr3_3:52875423-52875442 Msa0457760:intron 35.0%
CCTTGAGCTCAAATATTCAA+TGG - chr3_3:52875562-52875581 None:intergenic 35.0%
CCATTGAATATTTGAGCTCA+AGG + chr3_3:52875559-52875578 Msa0457760:intron 35.0%
! TCTTTTCTGCTCAATCAAGA+GGG - chr3_3:52875626-52875645 None:intergenic 35.0%
! ATCTTTTCTGCTCAATCAAG+AGG - chr3_3:52875627-52875646 None:intergenic 35.0%
CTTGATTGAGCAGAAAAGAT+TGG + chr3_3:52875627-52875646 Msa0457760:intron 35.0%
TGATTGAGCAGAAAAGATTG+GGG + chr3_3:52875629-52875648 Msa0457760:intron 35.0%
GAATATTCTTGACCATGAGA+TGG - chr3_3:52875938-52875957 None:intergenic 35.0%
!! TGTTAACCTCCGATTTTTAG+GGG - chr3_3:52876055-52876074 None:intergenic 35.0%
! GTGTTAACCTCCGATTTTTA+GGG - chr3_3:52876056-52876075 None:intergenic 35.0%
! TGTGTTAACCTCCGATTTTT+AGG - chr3_3:52876057-52876076 None:intergenic 35.0%
TGCAATGATATCGTATACAG+AGG + chr3_3:52876262-52876281 Msa0457760:intron 35.0%
GCAATGATATCGTATACAGA+GGG + chr3_3:52876263-52876282 Msa0457760:intron 35.0%
ATTAATGAGGTCCTAGCAAA+TGG + chr3_3:52876332-52876351 Msa0457760:intron 35.0%
TCAGGGACTAAAGTGATTAA+CGG + chr3_3:52876496-52876515 Msa0457760:intron 35.0%
ATTAACGGAGTCTACATTCA+GGG + chr3_3:52876511-52876530 Msa0457760:intron 35.0%
GACTAACAAAGTTTGCATTC+AGG + chr3_3:52876542-52876561 Msa0457760:intron 35.0%
GACTAACAAAGTCTACATTC+AGG + chr3_3:52876574-52876593 Msa0457760:intron 35.0%
! AGTCACTTTAGTCCATGAAT+CGG - chr3_3:52876650-52876669 None:intergenic 35.0%
CAATGAAACAGTGTTACGAA+GGG - chr3_3:52876774-52876793 None:intergenic 35.0%
CTTCGTAACACTGTTTCATT+GGG + chr3_3:52876773-52876792 Msa0457760:CDS 35.0%
TATTCATCTTCAAGAGCTTG+TGG - chr3_3:52876804-52876823 None:intergenic 35.0%
! GACTTTTGCTTCAAGACATT+TGG + chr3_3:52877004-52877023 Msa0457760:CDS 35.0%
CTTCAAGACATTTGGAGATA+GGG + chr3_3:52877012-52877031 Msa0457760:CDS 35.0%
CCATTAATGGTGTATGAAAC+AGG - chr3_3:52877064-52877083 None:intergenic 35.0%
CCTGTTTCATACACCATTAA+TGG + chr3_3:52877061-52877080 Msa0457760:CDS 35.0%
! TACACCATTAATGGATACCA+TGG + chr3_3:52877070-52877089 Msa0457760:CDS 35.0%
! TCCAACATATTTAGAGCATC+TGG - chr3_3:52877113-52877132 None:intergenic 35.0%
TATGTTGGAAATTGCTCTAC+TGG + chr3_3:52877124-52877143 Msa0457760:CDS 35.0%
AAGTGATGAGCAACAATGTA+GGG - chr3_3:52877166-52877185 None:intergenic 35.0%
AAAGTGATGAGCAACAATGT+AGG - chr3_3:52877167-52877186 None:intergenic 35.0%
! TGCCACTCAACATTTTTCAT+CGG + chr3_3:52877388-52877407 Msa0457760:intron 35.0%
!! ATCGATCTTAAAAGTGTCAG+CGG - chr3_3:52877432-52877451 None:intergenic 35.0%
! TTTCCTTTTTGATGAGCCTA+TGG - chr3_3:52877634-52877653 None:intergenic 35.0%
GGATAGTGACCATATGTAAT+TGG - chr3_3:52877985-52878004 None:intergenic 35.0%
GAAGTAGGTCATGTTGATAT+GGG - chr3_3:52878142-52878161 None:intergenic 35.0%
TGAAGTAGGTCATGTTGATA+TGG - chr3_3:52878143-52878162 None:intergenic 35.0%
ATGAAGAATGGTGTAGCTAT+TGG + chr3_3:52878311-52878330 Msa0457760:CDS 35.0%
ATCATGGAATCAACTTCAGT+TGG + chr3_3:52878878-52878897 Msa0457760:intron 35.0%
!!! GTGTGTGTGTTGGTTTTTAT+AGG - chr3_3:52878911-52878930 None:intergenic 35.0%
TGTTAAAAGACACCACCAAA+GGG - chr3_3:52879039-52879058 None:intergenic 35.0%
TTGTTAAAAGACACCACCAA+AGG - chr3_3:52879040-52879059 None:intergenic 35.0%
TGAGAATGAATTGCATGCAT+TGG + chr3_3:52879256-52879275 Msa0457760:intron 35.0%
ATGCATTGGATTAAAAGGAG+TGG + chr3_3:52879270-52879289 Msa0457760:intron 35.0%
ATGGGTCTGTATGAAGAATT+GGG - chr3_3:52879520-52879539 None:intergenic 35.0%
TATGGAAACTAGGGATAGAT+GGG - chr3_3:52879538-52879557 None:intergenic 35.0%
TTATGGAAACTAGGGATAGA+TGG - chr3_3:52879539-52879558 None:intergenic 35.0%
TTTCCCCCTTTGTATCATTA+TGG - chr3_3:52879556-52879575 None:intergenic 35.0%
GTGGATGCTGAAAAGATTTA+AGG - chr3_3:52879661-52879680 None:intergenic 35.0%
TGAGAATGAATTGCATCCAT+TGG - chr3_3:52879970-52879989 None:intergenic 35.0%
!! TGCACCTTAGTGTTTTTAAG+TGG + chr3_3:52880244-52880263 Msa0457760:intron 35.0%
!!! GCACCTTAGTGTTTTTAAGT+GGG + chr3_3:52880245-52880264 Msa0457760:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr3_3:52880241-52880260 None:intergenic 35.0%
! AAGTTTATGGTTTGTGCAGA+CGG + chr3_3:52880575-52880594 Msa0457760:intron 35.0%
ACAAGATGATGAATTCCCTT+CGG - chr3_3:52880624-52880643 None:intergenic 35.0%
AGATACATACAAGAATCCAC+CGG + chr3_3:52880656-52880675 Msa0457760:CDS 35.0%
! CCATTTTCAGTTATGTACAC+CGG - chr3_3:52880678-52880697 None:intergenic 35.0%
AGAAGCAATAAGTCTCCATA+AGG + chr3_3:52880762-52880781 Msa0457760:intron 35.0%
TCTCCATAAGGAGGATAATT+TGG + chr3_3:52880774-52880793 Msa0457760:intron 35.0%
TCACCAAATTATCCTCCTTA+TGG - chr3_3:52880780-52880799 None:intergenic 35.0%
AAACTATGGAGATACCCTAA+TGG + chr3_3:52880898-52880917 Msa0457760:intron 35.0%
ATTTAGACGTGTGAAGCAAA+AGG + chr3_3:52880993-52881012 Msa0457760:intron 35.0%
CGAATTGGGTAAACATTTCT+TGG - chr3_3:52881131-52881150 None:intergenic 35.0%
TCGGAAAATGGGTAGAAATT+AGG - chr3_3:52881274-52881293 None:intergenic 35.0%
TCATTGAGTGTCATGTTCAT+GGG - chr3_3:52881303-52881322 None:intergenic 35.0%
ATCATTGAGTGTCATGTTCA+TGG - chr3_3:52881304-52881323 None:intergenic 35.0%
TTGAAAAGAGAGGGAAACTT+GGG - chr3_3:52881430-52881449 None:intergenic 35.0%
TTTGAAAAGAGAGGGAAACT+TGG - chr3_3:52881431-52881450 None:intergenic 35.0%
GAGCACTATTTGAAAAGAGA+GGG - chr3_3:52881439-52881458 None:intergenic 35.0%
TGAGCACTATTTGAAAAGAG+AGG - chr3_3:52881440-52881459 None:intergenic 35.0%
!!! CATAGCACGATTTTGGAATA+TGG - chr3_3:52881525-52881544 None:intergenic 35.0%
TAGCTACTGGTAGAAAATTG+TGG - chr3_3:52881563-52881582 None:intergenic 35.0%
CTAGGTAGTGTTAAGAACTA+TGG - chr3_3:52881740-52881759 None:intergenic 35.0%
GATCCTAATACCATCTTTAC+GGG - chr3_3:52881920-52881939 None:intergenic 35.0%
GTTCATACTTTACTGCTTGA+AGG - chr3_3:52881972-52881991 None:intergenic 35.0%
TATGAGATCAATTCTCGAGT+AGG + chr3_3:52882327-52882346 Msa0457760:intron 35.0%
ATCGTTAGACTACCTTTGAA+AGG + chr3_3:52882377-52882396 Msa0457760:intron 35.0%
! TTTAGAGTCGTTCCTTTCAA+AGG - chr3_3:52882392-52882411 None:intergenic 35.0%
! TCGAACTCGCATATTTTGTT+AGG + chr3_3:52882414-52882433 Msa0457760:intron 35.0%
! CGAACTCGCATATTTTGTTA+GGG + chr3_3:52882415-52882434 Msa0457760:intron 35.0%
! GAACTCGCATATTTTGTTAG+GGG + chr3_3:52882416-52882435 Msa0457760:intron 35.0%
! CATTTTCCGATAGCTATGAA+TGG + chr3_3:52882577-52882596 Msa0457760:CDS 35.0%
! ATTTGAGTTATCCCTTGAGA+AGG - chr3_3:52882701-52882720 None:intergenic 35.0%
GTAACATACTAAGGTGACAT+TGG - chr3_3:52882775-52882794 None:intergenic 35.0%
!!! AACAACTCTCTTTTTTGGGA+AGG + chr3_3:52882915-52882934 Msa0457760:three_prime_UTR 35.0%
!!! TGGGAAGGATTGTTTTTAGT+AGG + chr3_3:52882930-52882949 Msa0457760:three_prime_UTR 35.0%
! CAAAACTGACCTATTTTGCA+GGG - chr3_3:52882974-52882993 None:intergenic 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG + chr3_3:52883022-52883041 Msa0457760:three_prime_UTR 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG - chr3_3:52883034-52883053 None:intergenic 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG + chr3_3:52883032-52883051 Msa0457760:intron 35.0%
GAAAAAAGATAGAGGAGGGA+AGG - chr3_3:52874442-52874461 None:intergenic 40.0%
CCAGAGAAAAAAGATAGAGG+AGG - chr3_3:52874447-52874466 None:intergenic 40.0%
!!! CCTCCTCTATCTTTTTTCTC+TGG + chr3_3:52874444-52874463 Msa0457760:CDS 40.0%
!!! ACACTTTTTGCTGTTGTCAC+CGG + chr3_3:52874469-52874488 Msa0457760:CDS 40.0%
AATGAAGCAGCATAGTGACT+TGG - chr3_3:52874517-52874536 None:intergenic 40.0%
! AATTGGTTCTTCTGCTTACC+AGG + chr3_3:52874573-52874592 Msa0457760:CDS 40.0%
ATAATGTGGTGGTATGAACC+TGG - chr3_3:52874594-52874613 None:intergenic 40.0%
CATAAAGGCCACTGTATTTC+CGG + chr3_3:52874680-52874699 Msa0457760:intron 40.0%
!!! ACACGGCCTCATATTTTTTG+AGG - chr3_3:52875064-52875083 None:intergenic 40.0%
ACAATAGGTTTGATCGCACA+CGG - chr3_3:52875081-52875100 None:intergenic 40.0%
CTACTGAGAATCGTAATCCA+AGG - chr3_3:52875231-52875250 None:intergenic 40.0%
GCTTCAAATATAGATGGGAG+AGG + chr3_3:52875429-52875448 Msa0457760:intron 40.0%
ACCTTCACTAAACAACATCC+AGG + chr3_3:52875468-52875487 Msa0457760:intron 40.0%
! ACCTGGATGTTGTTTAGTGA+AGG - chr3_3:52875472-52875491 None:intergenic 40.0%
! TTTTCTGCTCAATCAAGAGG+GGG - chr3_3:52875624-52875643 None:intergenic 40.0%
! CTTTTCTGCTCAATCAAGAG+GGG - chr3_3:52875625-52875644 None:intergenic 40.0%
CATACAGATTCTCCATCTCA+TGG + chr3_3:52875923-52875942 Msa0457760:CDS 40.0%
GGCTACATTCCCCTAAAAAT+CGG + chr3_3:52876043-52876062 Msa0457760:intron 40.0%
TACATTCCCCTAAAAATCGG+AGG + chr3_3:52876046-52876065 Msa0457760:intron 40.0%
ATATCGTATACAGAGGGCAA+GGG + chr3_3:52876269-52876288 Msa0457760:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr3_3:52876407-52876426 Msa0457760:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr3_3:52876408-52876427 Msa0457760:intron 40.0%
GATTAACGGAGTCTACATTC+AGG + chr3_3:52876510-52876529 Msa0457760:intron 40.0%
CTTTAGTCCATGAATCGGAA+GGG - chr3_3:52876645-52876664 None:intergenic 40.0%
ACTTTAGTCCATGAATCGGA+AGG - chr3_3:52876646-52876665 None:intergenic 40.0%
CCAATGAAACAGTGTTACGA+AGG - chr3_3:52876775-52876794 None:intergenic 40.0%
CCTTCGTAACACTGTTTCAT+TGG + chr3_3:52876772-52876791 Msa0457760:CDS 40.0%
CTTGAAGCAAAAGTCTGCAT+AGG - chr3_3:52876999-52877018 None:intergenic 40.0%
GCTTCAAGACATTTGGAGAT+AGG + chr3_3:52877011-52877030 Msa0457760:CDS 40.0%
TTGGAGATAGGGTTAAGCAT+TGG + chr3_3:52877023-52877042 Msa0457760:CDS 40.0%
TGGAGATAGGGTTAAGCATT+GGG + chr3_3:52877024-52877043 Msa0457760:CDS 40.0%
! ACCATTAATGGATACCATGG+AGG + chr3_3:52877073-52877092 Msa0457760:CDS 40.0%
! ACATATTTAGAGCATCTGGC+AGG - chr3_3:52877109-52877128 None:intergenic 40.0%
! GCCAGATGCTCTAAATATGT+TGG + chr3_3:52877109-52877128 Msa0457760:CDS 40.0%
TGCTGCAGCCAAATTGTATA+AGG + chr3_3:52877201-52877220 Msa0457760:CDS 40.0%
TTGCTCATTCACTGCATCAA+CGG + chr3_3:52877357-52877376 Msa0457760:intron 40.0%
TGCCGATGAAAAATGTTGAG+TGG - chr3_3:52877393-52877412 None:intergenic 40.0%
TCGGCAACACTATTGGAATA+TGG - chr3_3:52877691-52877710 None:intergenic 40.0%
TTTGTGATCGGCAACACTAT+TGG - chr3_3:52877698-52877717 None:intergenic 40.0%
! TCTACTTGCAGCTTTGTGAT+CGG - chr3_3:52877710-52877729 None:intergenic 40.0%
CAGACTCCCAAAATTCACAA+AGG + chr3_3:52878032-52878051 Msa0457760:CDS 40.0%
TAGGTCATGTTGATATGGGT+TGG - chr3_3:52878138-52878157 None:intergenic 40.0%
TGCTTGCATATCAGTGAAGT+AGG - chr3_3:52878157-52878176 None:intergenic 40.0%
TTGACCACAGCAATGAAGAA+TGG + chr3_3:52878299-52878318 Msa0457760:CDS 40.0%
TACACCATTCTTCATTGCTG+TGG - chr3_3:52878306-52878325 None:intergenic 40.0%
GCTATATTATGATGCGGTTG+TGG + chr3_3:52878515-52878534 Msa0457760:intron 40.0%
!! GGGAGCGTTGATATGTTAAA+AGG - chr3_3:52878855-52878874 None:intergenic 40.0%
TATCAACGCTCCCTATATCA+TGG + chr3_3:52878862-52878881 Msa0457760:intron 40.0%
! TTTTGTTACAAGCCACCCTT+TGG + chr3_3:52879021-52879040 Msa0457760:intron 40.0%
GATGCAATTGATTGGAGGTT+GGG - chr3_3:52879481-52879500 None:intergenic 40.0%
TGATGCAATTGATTGGAGGT+TGG - chr3_3:52879482-52879501 None:intergenic 40.0%
AGAGGGATGATGCAATTGAT+TGG - chr3_3:52879489-52879508 None:intergenic 40.0%
TGTATGAAGAATTGGGGATG+AGG - chr3_3:52879513-52879532 None:intergenic 40.0%
TGGGTCTGTATGAAGAATTG+GGG - chr3_3:52879519-52879538 None:intergenic 40.0%
GATGGGTCTGTATGAAGAAT+TGG - chr3_3:52879521-52879540 None:intergenic 40.0%
! GTTTTTGCAACTGGAACTGT+TGG + chr3_3:52879695-52879714 Msa0457760:intron 40.0%
GAGAGAGTTTGTCACATGAT+TGG + chr3_3:52879896-52879915 Msa0457760:intron 40.0%
GCACCCACTTAAAAACACTA+AGG - chr3_3:52880251-52880270 None:intergenic 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr3_3:52880303-52880322 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr3_3:52880304-52880323 None:intergenic 40.0%
! ACTTGCACCTCAGTGTTTTT+AGG + chr3_3:52880487-52880506 Msa0457760:intron 40.0%
! TTGTGCAGACGGATTTGAAT+TGG + chr3_3:52880586-52880605 Msa0457760:intron 40.0%
! TTTTCAGTTATGTACACCGG+TGG - chr3_3:52880675-52880694 None:intergenic 40.0%
CCGGTGTACATAACTGAAAA+TGG + chr3_3:52880675-52880694 Msa0457760:CDS 40.0%
AGCAATAAGTCTCCATAAGG+AGG + chr3_3:52880765-52880784 Msa0457760:intron 40.0%
GGTCATTCTTAGACCGAATT+GGG - chr3_3:52881145-52881164 None:intergenic 40.0%
AGGTCATTCTTAGACCGAAT+TGG - chr3_3:52881146-52881165 None:intergenic 40.0%
GTCTAAGAATGACCTACTCT+GGG + chr3_3:52881151-52881170 Msa0457760:intron 40.0%
TCTAAGAATGACCTACTCTG+GGG + chr3_3:52881152-52881171 Msa0457760:intron 40.0%
! ATTTCTCTTTTCCCCAGAGT+AGG - chr3_3:52881166-52881185 None:intergenic 40.0%
ATGGGAAGAGATCGGAAAAT+GGG - chr3_3:52881285-52881304 None:intergenic 40.0%
TCATGTTCATGGGAAGAGAT+CGG - chr3_3:52881293-52881312 None:intergenic 40.0%
! CAATGATTTTCACTCACCCA+AGG + chr3_3:52881317-52881336 Msa0457760:intron 40.0%
!! ACTTTAGGATTGAGGGTCTT+TGG - chr3_3:52881392-52881411 None:intergenic 40.0%
!! GGAGGTAACTTTAGGATTGA+GGG - chr3_3:52881399-52881418 None:intergenic 40.0%
!! AGGAGGTAACTTTAGGATTG+AGG - chr3_3:52881400-52881419 None:intergenic 40.0%
GAAACTTGGGAAATCAAAGG+AGG - chr3_3:52881417-52881436 None:intergenic 40.0%
AGGGAAACTTGGGAAATCAA+AGG - chr3_3:52881420-52881439 None:intergenic 40.0%
! GCCTAAATCGTGTCACTATA+AGG + chr3_3:52881475-52881494 Msa0457760:intron 40.0%
GCCTTATAGTGACACGATTT+AGG - chr3_3:52881479-52881498 None:intergenic 40.0%
CAAAATGCAGATGTAGCTAC+TGG - chr3_3:52881576-52881595 None:intergenic 40.0%
! ACAATCGTGGCACGATTTTT+AGG - chr3_3:52881599-52881618 None:intergenic 40.0%
ACACTACCTAGCTAAATGTC+TGG + chr3_3:52881749-52881768 Msa0457760:intron 40.0%
TATGGTCCAGACATTTAGCT+AGG - chr3_3:52881758-52881777 None:intergenic 40.0%
! TGTGAATACGTTTCAGGTGT+TGG + chr3_3:52881859-52881878 Msa0457760:intron 40.0%
!! TTTCAGGTGTTGGTCAATCA+AGG + chr3_3:52881869-52881888 Msa0457760:intron 40.0%
TAGCCCGTAAAGATGGTATT+AGG + chr3_3:52881914-52881933 Msa0457760:CDS 40.0%
! GGAATTTGAGATGGCTATCA+TGG - chr3_3:52881948-52881967 None:intergenic 40.0%
CTTGAAGGAGGAATTTGAGA+TGG - chr3_3:52881957-52881976 None:intergenic 40.0%
CATACTTTACTGCTTGAAGG+AGG - chr3_3:52881969-52881988 None:intergenic 40.0%
! GAGATACTTGGTTTGAGTCA+CGG + chr3_3:52882247-52882266 Msa0457760:intron 40.0%
ATATCTTGTCGAACATGCTC+AGG - chr3_3:52882275-52882294 None:intergenic 40.0%
! TGTCCTTTTTGTTGCAGAGA+TGG + chr3_3:52882525-52882544 Msa0457760:intron 40.0%
AGAGATGGTGCAAATGTGAA+GGG + chr3_3:52882540-52882559 Msa0457760:intron 40.0%
TGCATCCCATTCATAGCTAT+CGG - chr3_3:52882586-52882605 None:intergenic 40.0%
!! ATCCCAAGTACTCTGCTTTT+TGG + chr3_3:52882664-52882683 Msa0457760:CDS 40.0%
! AGCCAAAAAGCAGAGTACTT+GGG - chr3_3:52882669-52882688 None:intergenic 40.0%
CTGCAAAAGTTCCTTCTCAA+GGG + chr3_3:52882687-52882706 Msa0457760:CDS 40.0%
! CCAAAACTGACCTATTTTGC+AGG - chr3_3:52882975-52882994 None:intergenic 40.0%
! CCTGCAAAATAGGTCAGTTT+TGG + chr3_3:52882972-52882991 Msa0457760:three_prime_UTR 40.0%
CACATGTTGTGATGCAGTTC+CGG - chr3_3:52874491-52874510 None:intergenic 45.0%
CGAAAACACCGGAAATACAG+TGG - chr3_3:52874691-52874710 None:intergenic 45.0%
AACATGCTCAAGACCGTCAT+TGG + chr3_3:52875102-52875121 Msa0457760:intron 45.0%
ATGGGAGAGGACCAAGTATA+TGG + chr3_3:52875442-52875461 Msa0457760:intron 45.0%
TGGGAGAGGACCAAGTATAT+GGG + chr3_3:52875443-52875462 Msa0457760:intron 45.0%
!! GTGAAGGTGTCCCATATACT+TGG - chr3_3:52875456-52875475 None:intergenic 45.0%
GACCACAGCAGTGGTAATAT+TGG + chr3_3:52875651-52875670 Msa0457760:intron 45.0%
CTCCAATATTACCACTGCTG+TGG - chr3_3:52875656-52875675 None:intergenic 45.0%
GATATCGTATACAGAGGGCA+AGG + chr3_3:52876268-52876287 Msa0457760:intron 45.0%
AAGGGAGCAGTCAATCCTAT+GGG + chr3_3:52876287-52876306 Msa0457760:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG - chr3_3:52876483-52876502 None:intergenic 45.0%
GATGAATCCCTTCCGATTCA+TGG + chr3_3:52876635-52876654 Msa0457760:intron 45.0%
GCCTCCATGGTATCCATTAA+TGG - chr3_3:52877077-52877096 None:intergenic 45.0%
! TATTTAGAGCATCTGGCAGG+TGG - chr3_3:52877106-52877125 None:intergenic 45.0%
GTGCCATAGGCTCATCAAAA+AGG + chr3_3:52877628-52877647 Msa0457760:intron 45.0%
!! TTTTGGGAGTCTGTTACCCA+AGG - chr3_3:52878025-52878044 None:intergenic 45.0%
!! GTCATGTTGATATGGGTTGG+TGG - chr3_3:52878135-52878154 None:intergenic 45.0%
TTATGATGCGGTTGTGGACA+TGG + chr3_3:52878521-52878540 Msa0457760:intron 45.0%
GCAAGCTAACACACCAATAG+AGG - chr3_3:52878565-52878584 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr3_3:52879036-52879055 None:intergenic 45.0%
CTCTTTCTGCTTCAACTGTG+CGG + chr3_3:52879380-52879399 Msa0457760:intron 45.0%
GGGATGATGCAATTGATTGG+AGG - chr3_3:52879486-52879505 None:intergenic 45.0%
AGAATTGGGGATGAGGAAGA+GGG - chr3_3:52879506-52879525 None:intergenic 45.0%
AAGAATTGGGGATGAGGAAG+AGG - chr3_3:52879507-52879526 None:intergenic 45.0%
TTTGCAACTGGAACTGTTGG+TGG + chr3_3:52879698-52879717 Msa0457760:intron 45.0%
! AACTGGAACTGTTGGTGGAA+GGG + chr3_3:52879703-52879722 Msa0457760:intron 45.0%
AAGGAAACACGAGGAGAAGA+GGG + chr3_3:52879752-52879771 Msa0457760:intron 45.0%
!! CAGCTTGTTAACTTGCACCT+TGG - chr3_3:52880477-52880496 None:intergenic 45.0%
GCACCCACCTAAAAACACTA+AGG + chr3_3:52880297-52880316 Msa0457760:intron 45.0%
!!! TGCACCTCAGTGTTTTTAGG+TGG + chr3_3:52880490-52880509 Msa0457760:intron 45.0%
!!! GCACCTCAGTGTTTTTAGGT+GGG + chr3_3:52880491-52880510 Msa0457760:intron 45.0%
TTGGCTATACGTCTATCCGA+AGG + chr3_3:52880605-52880624 Msa0457760:CDS 45.0%
TGGCTATACGTCTATCCGAA+GGG + chr3_3:52880606-52880625 Msa0457760:CDS 45.0%
GGTCTAAGAATGACCTACTC+TGG + chr3_3:52881150-52881169 Msa0457760:intron 45.0%
CATGGGAAGAGATCGGAAAA+TGG - chr3_3:52881286-52881305 None:intergenic 45.0%
TTGGTGAGTGTTCTCTTGAG+AGG - chr3_3:52881373-52881392 None:intergenic 45.0%
GGTAGAAAATTGTGGCGCAA+TGG - chr3_3:52881555-52881574 None:intergenic 45.0%
GTTTGGGAAGTTGACAATCG+TGG - chr3_3:52881612-52881631 None:intergenic 45.0%
CTCTCAACCAAGTGACTTCT+CGG - chr3_3:52882210-52882229 None:intergenic 45.0%
CTCTTCAACCTCGAGATACT+TGG + chr3_3:52882235-52882254 Msa0457760:intron 45.0%
GACTCAAACCAAGTATCTCG+AGG - chr3_3:52882246-52882265 None:intergenic 45.0%
GCACCATCTCTGCAACAAAA+AGG - chr3_3:52882531-52882550 None:intergenic 45.0%
CAGAGATGGTGCAAATGTGA+AGG + chr3_3:52882539-52882558 Msa0457760:intron 45.0%
ATGTGAAGGGCTACTATGCA+TGG + chr3_3:52882553-52882572 Msa0457760:CDS 45.0%
GATAGCTATGAATGGGATGC+AGG + chr3_3:52882585-52882604 Msa0457760:CDS 45.0%
! CAGCCAAAAAGCAGAGTACT+TGG - chr3_3:52882670-52882689 None:intergenic 45.0%
GCTGCAAAAGTTCCTTCTCA+AGG + chr3_3:52882686-52882705 Msa0457760:CDS 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG + chr3_3:52882962-52882981 Msa0457760:three_prime_UTR 45.0%
!! AAAATAAAATAATTACAAAA+GGG - chr3_3:52876678-52876697 None:intergenic 5.0%
!! TAAAATAAAATAATTACAAA+AGG - chr3_3:52876679-52876698 None:intergenic 5.0%
!!! AACTAAATTTTTTATATATA+CGG + chr3_3:52876734-52876753 Msa0457760:intron 5.0%
!! TAGAAAATAATAAATTTAAT+AGG - chr3_3:52876898-52876917 None:intergenic 5.0%
!!! ATTCTTTATTTTTTAAATTA+AGG - chr3_3:52877789-52877808 None:intergenic 5.0%
!! AAAAAAAAAAAGATTATTAT+TGG + chr3_3:52877837-52877856 Msa0457760:intron 5.0%
!! ATATATATATATATATATAG+GGG - chr3_3:52878999-52879018 None:intergenic 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG - chr3_3:52880171-52880190 None:intergenic 5.0%
TCTGCAGCCATGAAAGCTAC+AGG + chr3_3:52874415-52874434 Msa0457760:exon 50.0%
GGAAGGACCTGTAGCTTTCA+TGG - chr3_3:52874425-52874444 None:intergenic 50.0%
CAAGGGAGCAGTCAATCCTA+TGG + chr3_3:52876286-52876305 Msa0457760:intron 50.0%
CTTTAGTCCCTGAATGGGAG+AGG + chr3_3:52876413-52876432 Msa0457760:intron 50.0%
GACGAATCCTCTCCCATTCA+GGG - chr3_3:52876423-52876442 None:intergenic 50.0%
TGACGAATCCTCTCCCATTC+AGG - chr3_3:52876424-52876443 None:intergenic 50.0%
ATTGCAAAACAGCCCCTGCA+TGG + chr3_3:52876467-52876486 Msa0457760:intron 50.0%
CCCTGAAATTGACCATGCAG+GGG - chr3_3:52876482-52876501 None:intergenic 50.0%
CCCCTGCATGGTCAATTTCA+GGG + chr3_3:52876479-52876498 Msa0457760:intron 50.0%
GTCCCTGAAATTGACCATGC+AGG - chr3_3:52876484-52876503 None:intergenic 50.0%
!! TGGTGTAGCTATTGGCTCCT+CGG + chr3_3:52878319-52878338 Msa0457760:CDS 50.0%
GTGTGTGTGTGTGTGTGTGT+TGG - chr3_3:52878921-52878940 None:intergenic 50.0%
TGTTACAAGCCACCCTTTGG+TGG + chr3_3:52879024-52879043 Msa0457760:intron 50.0%
! GGGGGCATATCACATGAGAA+TGG + chr3_3:52879223-52879242 Msa0457760:intron 50.0%
CAATTGATTGGAGGTTGGGC+TGG - chr3_3:52879477-52879496 None:intergenic 50.0%
! CAACTGGAACTGTTGGTGGA+AGG + chr3_3:52879702-52879721 Msa0457760:intron 50.0%
GAAGGAAACACGAGGAGAAG+AGG + chr3_3:52879751-52879770 Msa0457760:intron 50.0%
! CTTTCTGCCGCCACCATTTT+CGG - chr3_3:52879814-52879833 None:intergenic 50.0%
AGACAGAACGCATGCGTGAA+AGG + chr3_3:52879864-52879883 Msa0457760:intron 50.0%
GACAGAACGCATGCGTGAAA+GGG + chr3_3:52879865-52879884 Msa0457760:intron 50.0%
TGGGTGCAAGTTAACAGTGG+GGG - chr3_3:52880284-52880303 None:intergenic 50.0%
GTGGGTGCAAGTTAACAGTG+GGG - chr3_3:52880285-52880304 None:intergenic 50.0%
GGTGGGTGCAAGTTAACAGT+GGG - chr3_3:52880286-52880305 None:intergenic 50.0%
AGGTGGGTGCAAGTTAACAG+TGG - chr3_3:52880287-52880306 None:intergenic 50.0%
GCACCCACCTAAAAACACTG+AGG - chr3_3:52880497-52880516 None:intergenic 50.0%
! TCTTTACGGGCTACGTTGAC+TGG - chr3_3:52881907-52881926 None:intergenic 50.0%
GTCAACGTAGCCCGTAAAGA+TGG + chr3_3:52881907-52881926 Msa0457760:CDS 50.0%
TGTTCGACCGAGAAGTCACT+TGG + chr3_3:52882200-52882219 Msa0457760:intron 50.0%
GCAGGCTACACGATACGATT+TGG + chr3_3:52882603-52882622 Msa0457760:CDS 50.0%
AAGAGGGGGAGAGAGAGAGA+GGG - chr3_3:52875610-52875629 None:intergenic 55.0%
AAGATTGGGGACCACAGCAG+TGG + chr3_3:52875642-52875661 Msa0457760:intron 55.0%
GCCCCTGCATGGTCAATTTC+AGG + chr3_3:52876478-52876497 Msa0457760:intron 55.0%
!! GAACTGGTGGTGGAAGGTGA+GGG - chr3_3:52879414-52879433 None:intergenic 55.0%
!! CCTTGGTGATGGAAGGTTGG+GGG - chr3_3:52879443-52879462 None:intergenic 55.0%
!! CCCTTGGTGATGGAAGGTTG+GGG - chr3_3:52879444-52879463 None:intergenic 55.0%
CCCCAACCTTCCATCACCAA+GGG + chr3_3:52879441-52879460 Msa0457760:intron 55.0%
!! CCCCTTGGTGATGGAAGGTT+GGG - chr3_3:52879445-52879464 None:intergenic 55.0%
CCCAACCTTCCATCACCAAG+GGG + chr3_3:52879442-52879461 Msa0457760:intron 55.0%
TGGAGGTGGAAGGAAACACG+AGG + chr3_3:52879743-52879762 Msa0457760:intron 55.0%
!! ACGACCCCTTGATGGTGGAA+GGG + chr3_3:52879780-52879799 Msa0457760:intron 55.0%
CCAACCCTTCCACCATCAAG+GGG - chr3_3:52879787-52879806 None:intergenic 55.0%
CCCAACCCTTCCACCATCAA+GGG - chr3_3:52879788-52879807 None:intergenic 55.0%
!! CCCTTGATGGTGGAAGGGTT+GGG + chr3_3:52879785-52879804 Msa0457760:intron 55.0%
!! CCTTGATGGTGGAAGGGTTG+GGG + chr3_3:52879786-52879805 Msa0457760:intron 55.0%
CGCATGCGTGAAAGGGAAGA+AGG + chr3_3:52879872-52879891 Msa0457760:intron 55.0%
CAAGAGGGGGAGAGAGAGAG+AGG - chr3_3:52875611-52875630 None:intergenic 60.0%
!! CAGGTGGAGAAGTGCCTCCA+TGG - chr3_3:52877090-52877109 None:intergenic 60.0%
!! GGAACTGGTGGTGGAAGGTG+AGG - chr3_3:52879415-52879434 None:intergenic 60.0%
!! TCGTCGGAACTGGTGGTGGA+AGG - chr3_3:52879420-52879439 None:intergenic 60.0%
GATGGAAGGTTGGGGGTCGT+CGG - chr3_3:52879436-52879455 None:intergenic 60.0%
CCCCCAACCTTCCATCACCA+AGG + chr3_3:52879440-52879459 Msa0457760:intron 60.0%
!! GCCCCTTGGTGATGGAAGGT+TGG - chr3_3:52879446-52879465 None:intergenic 60.0%
!! ATTGGAGGTTGGGCTGGCGA+CGG - chr3_3:52879471-52879490 None:intergenic 60.0%
TTCTCCGCGACAGCAAGTGG+AGG + chr3_3:52879726-52879745 Msa0457760:intron 60.0%
!! TCCACCTCCACTTGCTGTCG+CGG - chr3_3:52879733-52879752 None:intergenic 60.0%
CGACAGCAAGTGGAGGTGGA+AGG + chr3_3:52879733-52879752 Msa0457760:intron 60.0%
!! GACGACCCCTTGATGGTGGA+AGG + chr3_3:52879779-52879798 Msa0457760:intron 60.0%
!! CCCCTTGATGGTGGAAGGGT+TGG + chr3_3:52879784-52879803 Msa0457760:intron 60.0%
CCCCAACCCTTCCACCATCA+AGG - chr3_3:52879789-52879808 None:intergenic 60.0%
!! AAGGGTTGGGGCGCCGAAAA+TGG + chr3_3:52879798-52879817 Msa0457760:intron 60.0%
TTGGGGGTCGTCGGAACTGG+TGG - chr3_3:52879427-52879446 None:intergenic 65.0%
AGGTTGGGGGTCGTCGGAAC+TGG - chr3_3:52879430-52879449 None:intergenic 65.0%
GGGTTCTCCGCGACAGCAAG+TGG + chr3_3:52879723-52879742 Msa0457760:intron 65.0%
TCCGCGACAGCAAGTGGAGG+TGG + chr3_3:52879729-52879748 Msa0457760:intron 65.0%
CGACGACGACCCCTTGATGG+TGG + chr3_3:52879775-52879794 Msa0457760:intron 65.0%
!! GGTTGGGGCGCCGAAAATGG+TGG + chr3_3:52879801-52879820 Msa0457760:intron 65.0%
!! TGGGGCGCCGAAAATGGTGG+CGG + chr3_3:52879804-52879823 Msa0457760:intron 65.0%
GGGGTCGTCGGAACTGGTGG+TGG - chr3_3:52879424-52879443 None:intergenic 70.0%
!! GGCGGCCCCTTGGTGATGGA+AGG - chr3_3:52879450-52879469 None:intergenic 70.0%
GGGCGACGACGACCCCTTGA+TGG + chr3_3:52879772-52879791 Msa0457760:intron 70.0%
CGACGGCGGCCCCTTGGTGA+TGG - chr3_3:52879454-52879473 None:intergenic 75.0%
!! GGAGGTTGGGCTGGCGACGG+CGG - chr3_3:52879468-52879487 None:intergenic 75.0%
! GGCTGGCGACGGCGGCCCCT+TGG - chr3_3:52879460-52879479 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 52874339 52883087 52874339 ID=Msa0457760;Name=Msa0457760
chr3_3 mRNA 52874339 52883087 52874339 ID=Msa0457760-mRNA-1;Parent=Msa0457760;Name=Msa0457760-mRNA-1;_AED=0.12;_eAED=0.12;_QI=85|0.6|0.72|1|0.6|0.63|11|353|454
chr3_3 exon 52874339 52874594 52874339 ID=Msa0457760-mRNA-1:exon:10205;Parent=Msa0457760-mRNA-1
chr3_3 exon 52875886 52875961 52875886 ID=Msa0457760-mRNA-1:exon:10206;Parent=Msa0457760-mRNA-1
chr3_3 exon 52876763 52876850 52876763 ID=Msa0457760-mRNA-1:exon:10207;Parent=Msa0457760-mRNA-1
chr3_3 exon 52876982 52877234 52876982 ID=Msa0457760-mRNA-1:exon:10208;Parent=Msa0457760-mRNA-1
chr3_3 exon 52877637 52877752 52877637 ID=Msa0457760-mRNA-1:exon:10209;Parent=Msa0457760-mRNA-1
chr3_3 exon 52877972 52878186 52877972 ID=Msa0457760-mRNA-1:exon:10210;Parent=Msa0457760-mRNA-1
chr3_3 exon 52878279 52878340 52878279 ID=Msa0457760-mRNA-1:exon:10211;Parent=Msa0457760-mRNA-1
chr3_3 exon 52880594 52880696 52880594 ID=Msa0457760-mRNA-1:exon:10212;Parent=Msa0457760-mRNA-1
chr3_3 exon 52881875 52881983 52881875 ID=Msa0457760-mRNA-1:exon:10213;Parent=Msa0457760-mRNA-1
chr3_3 exon 52882542 52883048 52882542 ID=Msa0457760-mRNA-1:exon:10214;Parent=Msa0457760-mRNA-1
chr3_3 exon 52883070 52883087 52883070 ID=Msa0457760-mRNA-1:exon:10215;Parent=Msa0457760-mRNA-1
chr3_3 five_prime_UTR 52874339 52874423 52874339 ID=Msa0457760-mRNA-1:five_prime_utr;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52874424 52874594 52874424 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52875886 52875961 52875886 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52876763 52876850 52876763 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52876982 52877234 52876982 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52877637 52877752 52877637 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52877972 52878186 52877972 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52878279 52878340 52878279 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52880594 52880696 52880594 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52881875 52881983 52881875 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 CDS 52882542 52882713 52882542 ID=Msa0457760-mRNA-1:cds;Parent=Msa0457760-mRNA-1
chr3_3 three_prime_UTR 52882714 52883048 52882714 ID=Msa0457760-mRNA-1:three_prime_utr;Parent=Msa0457760-mRNA-1
chr3_3 three_prime_UTR 52883070 52883087 52883070 ID=Msa0457760-mRNA-1:three_prime_utr;Parent=Msa0457760-mRNA-1
Gene Sequence

>Msa0457760

ATGAAAGCTACAGGTCCTTCCCTCCTCTATCTTTTTTCTCTGGCTACACTTTTTGCTGTTGTCACCGGAACTGCATCACAACATGTGCATCCAAGTCACTATGCTGCTTCATTCAATAGGAGCCTTTTTCCTCCTGATTTTCTCTTTGGAATTGGTTCTTCTGCTTACCAGAGTGACATAAAGATTATGAAAGAAATTGGTTTGGACTCATACAGATTCTCCATCTCATGGTCAAGAATATTCCCAAGCTTGATACCCTTCGTAACACTGTTTCATTGGGATCTTCCACAAGCTCTTGAAGATGAATATAAGGGATTTCTAAGTCCTAAAGTAGTGAAGGATTTTGAAGCCTATGCAGACTTTTGCTTCAAGACATTTGGAGATAGGGTTAAGCATTGGGTGACACTTAATGAGCCTGTTTCATACACCATTAATGGATACCATGGAGGCACTTCTCCACCTGCCAGATGCTCTAAATATGTTGGAAATTGCTCTACTGGTGACTCAACTACAGAACCCTACATTGTTGCTCATCACTTTATACTTTCTCATGCTGCTGCAGCCAAATTGTATAAGGCCAAATATCAGGCTCATCAAAAAGGAAAAATTGGAATTACCTTAATTACTCACTACTATGAACCATATTCCAATAGTGTTGCCGATCACAAAGCTGCAAGTAGAGCACTTGACTTTTTATTTGGATGGTTTGCTCATCCAATTACATATGGTCACTATCCACAAACAATGATATCATCCTTGGGTAACAGACTCCCAAAATTCACAAAGGAAGAATTTAAAATTATCAAAGGTTCCTATGATTTTCTTGGTGTGAATTATTACACCACATATTATGCACAAAGCATTCCACCAACCCATATCAACATGACCTACTTCACTGATATGCAAGCAAACCTCATTCCACAAGCATTAACTTTTTTCTTGACCACAGCAATGAAGAATGGTGTAGCTATTGGCTCCTCGACGGATTTGAATTGGCTATACGTCTATCCGAAGGGAATTCATCATCTTGTGACACACATCAAAGATACATACAAGAATCCACCGGTGTACATAACTGAAAATGGTGTTGGTCAATCAAGGAATGACTCAATACCAGTCAACGTAGCCCGTAAAGATGGTATTAGGATCAGATACCATGATAGCCATCTCAAATTCCTCCTTCAAGCAGTAAAAGATGGTGCAAATGTGAAGGGCTACTATGCATGGTCATTTTCCGATAGCTATGAATGGGATGCAGGCTACACGATACGATTTGGAATAATTTATGTGGATTTCGTTAACAATTTGAAAAGATATCCCAAGTACTCTGCTTTTTGGCTGCAAAAGTTCCTTCTCAAGGGATAA
Protein sequence

>Msa0457760

MKATGPSLLYLFSLATLFAVVTGTASQHVHPSHYAASFNRSLFPPDFLFGIGSSAYQSDIKIMKEIGLDSYRFSISWSRIFPSLIPFVTLFHWDLPQALEDEYKGFLSPKVVKDFEAYADFCFKTFGDRVKHWVTLNEPVSYTINGYHGGTSPPARCSKYVGNCSTGDSTTEPYIVAHHFILSHAAAAKLYKAKYQAHQKGKIGITLITHYYEPYSNSVADHKAASRALDFLFGWFAHPITYGHYPQTMISSLGNRLPKFTKEEFKIIKGSYDFLGVNYYTTYYAQSIPPTHINMTYFTDMQANLIPQALTFFLTTAMKNGVAIGSSTDLNWLYVYPKGIHHLVTHIKDTYKNPPVYITENGVGQSRNDSIPVNVARKDGIRIRYHDSHLKFLLQAVKDGANVKGYYAWSFSDSYEWDAGYTIRFGIIYVDFVNNLKRYPKYSAFWLQKFLLKG*