Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0461750 | XP_013460004.2 | 98.891 | 992 | 11 | 0 | 1 | 992 | 136 | 1127 | 0.0 | 2049 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0461750 | sp|F4I116|SYLC_ARATH | 70.523 | 994 | 275 | 4 | 1 | 990 | 103 | 1082 | 0.0 | 1488 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0461750 | A0A396INR9 | 98.891 | 992 | 11 | 0 | 1 | 992 | 136 | 1127 | 0.0 | 2049 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0461750 | Msa0790400 | 0.810986 | 8.775031e-51 | -8.615850e-47 |
Msa0461750 | Msa1123350 | 0.804060 | 2.589366e-49 | -8.615850e-47 |
Msa0461750 | Msa1421560 | 0.807660 | 4.535976e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0461750 | MtrunA17_Chr3g0101981 | 98.891 | 992 | 11 | 0 | 1 | 992 | 136 | 1127 | 0.0 | 2049 |
Msa0461750 | MtrunA17_Chr7g0214721 | 79.121 | 1001 | 190 | 5 | 1 | 990 | 108 | 1100 | 0.0 | 1632 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0461750 | AT1G09620.1 | 70.523 | 994 | 275 | 4 | 1 | 990 | 103 | 1082 | 0.0 | 1488 |
Find 250 sgRNAs with CRISPR-Local
Find 514 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCATTATGCAGAGTTTATT+TGG | 0.118960 | 3_3:+60254677 | Msa0461750:CDS |
TGCTGAGATTTCGGAGTTTC+AGG | 0.139977 | 3_3:+60250288 | Msa0461750:CDS |
GTTGATGATCTTAAGGCTTT+TGG | 0.141253 | 3_3:+60250349 | Msa0461750:CDS |
TTTCAAGTATGTTTGTTTCT+TGG | 0.170074 | 3_3:-60251172 | None:intergenic |
TTGCTTCAGAAGCAACTTTC+AGG | 0.207186 | 3_3:+60254823 | Msa0461750:CDS |
AGAATCCTGTAGATATTTAT+TGG | 0.218050 | 3_3:-60254782 | None:intergenic |
GGCAAAAGGTAAGATGATTT+TGG | 0.221738 | 3_3:-60254123 | None:intergenic |
GTGTTGCCTGATGGGAAATA+TGG | 0.227710 | 3_3:+60250703 | Msa0461750:CDS |
TCCTGAGAAGTTTAAGGTTT+TGG | 0.229764 | 3_3:+60250609 | Msa0461750:CDS |
TGCTGTCTCAAACACAAAAT+TGG | 0.236931 | 3_3:-60254341 | None:intergenic |
ATCGAAAGTTGCTGCGAAAT+CGG | 0.255551 | 3_3:+60250216 | Msa0461750:CDS |
ATCATAAAAGCCAGTCTTTA+GGG | 0.262278 | 3_3:-60254542 | None:intergenic |
CAAACGGCAGTCTCAAATTC+AGG | 0.265312 | 3_3:-60255137 | None:intergenic |
TGCTCCGGAATCAGAAATTA+TGG | 0.270285 | 3_3:+60254999 | Msa0461750:CDS |
GCTGTTGCTGGGAAATTTAA+AGG | 0.271129 | 3_3:+60250187 | Msa0461750:CDS |
GCTAGGGAGATTCAGCAATT+TGG | 0.276910 | 3_3:+60250067 | Msa0461750:CDS |
GATCATAAAAGCCAGTCTTT+AGG | 0.279076 | 3_3:-60254543 | None:intergenic |
AAATATGACAACCACTTATA+AGG | 0.283838 | 3_3:-60250313 | None:intergenic |
CTTGATTAGGAGCAAGCTTT+TGG | 0.289176 | 3_3:+60251260 | Msa0461750:CDS |
TGCAGCTGATGCTGATTCTT+TGG | 0.308725 | 3_3:+60255245 | Msa0461750:CDS |
CTTCTTGCCCATGTAGATAC+TGG | 0.308779 | 3_3:+60255335 | Msa0461750:exon |
AATCTTCGTTAAAGCTGTTC+TGG | 0.312431 | 3_3:-60254966 | None:intergenic |
ATCATTGAAGTTCCGCCATT+TGG | 0.316311 | 3_3:+60251075 | Msa0461750:CDS |
TGCTCACGTTCATTTGGTCT+TGG | 0.318883 | 3_3:+60253812 | Msa0461750:CDS |
TGTTAAGGATGTTAGGTATA+CGG | 0.323328 | 3_3:+60250477 | Msa0461750:CDS |
TTCAAACCATGTAAGCTCTT+TGG | 0.323857 | 3_3:-60254386 | None:intergenic |
TGATGACTACATGGCGTTGC+AGG | 0.331946 | 3_3:+60250975 | Msa0461750:CDS |
GACGGCAATGTTAATTTCAT+TGG | 0.332867 | 3_3:-60254476 | None:intergenic |
ATTTAAAGATAAGAAAGTTC+AGG | 0.334149 | 3_3:+60251227 | Msa0461750:CDS |
TATATCTGATGCTGAGATTT+CGG | 0.341395 | 3_3:+60250279 | Msa0461750:CDS |
CTGGTATCCATTTGATCTTC+GGG | 0.342901 | 3_3:+60254081 | Msa0461750:CDS |
TGGGCTTGCTCACGTTCATT+TGG | 0.351731 | 3_3:+60253806 | Msa0461750:CDS |
GACTTGTTTGCTTGAGCTTA+CGG | 0.353807 | 3_3:+60250822 | Msa0461750:CDS |
CTAACAAAAGCATCAAAATA+AGG | 0.356226 | 3_3:-60250418 | None:intergenic |
TGGTGAAATTGAGGTTCTTC+GGG | 0.356396 | 3_3:+60255158 | Msa0461750:CDS |
GAATTTAACTGTTGTTGATA+AGG | 0.357125 | 3_3:+60250129 | Msa0461750:CDS |
GAGGTACCCTAGAGTGATTT+TGG | 0.358590 | 3_3:-60250792 | None:intergenic |
TGAAGTCCAAAGCGGCGTTT+AGG | 0.360778 | 3_3:+60251001 | Msa0461750:CDS |
AGCCGTGTGCGGATCATGAT+AGG | 0.361447 | 3_3:+60250521 | Msa0461750:CDS |
GCCGCCATAATTTCTGATTC+CGG | 0.361751 | 3_3:-60255003 | None:intergenic |
CTTCGCCCTAAACGCCGCTT+TGG | 0.362091 | 3_3:-60251007 | None:intergenic |
GTTGGCTGTTGATGATCTTA+AGG | 0.366304 | 3_3:+60250342 | Msa0461750:CDS |
GTAAGGTTGTTAAGGATGTT+AGG | 0.367750 | 3_3:+60250470 | Msa0461750:CDS |
TGATGCTACACGCTTCTCTT+TGG | 0.368017 | 3_3:+60254291 | Msa0461750:CDS |
TTGGTGAAATTGAGGTTCTT+CGG | 0.372279 | 3_3:+60255157 | Msa0461750:CDS |
AGTTATGTATGCCTTTCTTA+AGG | 0.379478 | 3_3:+60255076 | Msa0461750:CDS |
AAGACGGCAGTAGGACTTCC+AGG | 0.383040 | 3_3:-60255315 | None:intergenic |
ACTGGTATCCATTTGATCTT+CGG | 0.385909 | 3_3:+60254080 | Msa0461750:CDS |
TATTGGCACTCTTTAGTGTA+AGG | 0.387718 | 3_3:-60254765 | None:intergenic |
CCATTTGATCTTCGGGTGTC+TGG | 0.388973 | 3_3:+60254088 | Msa0461750:CDS |
ATTTCTGTTGGCACTACAAC+AGG | 0.392955 | 3_3:-60254874 | None:intergenic |
CCACGAGGCCAGTGACGCTT+GGG | 0.393245 | 3_3:-60254169 | None:intergenic |
AGCAACTGACTGATGATGTC+TGG | 0.396202 | 3_3:+60253972 | Msa0461750:CDS |
GTGCGCAGAGACGGTTTGCC+TGG | 0.396732 | 3_3:+60251104 | Msa0461750:CDS |
ACTTGTTTGCTTGAGCTTAC+GGG | 0.397198 | 3_3:+60250823 | Msa0461750:CDS |
TGAGGTTCTTCGGGAAAACT+TGG | 0.398811 | 3_3:+60255167 | Msa0461750:CDS |
CAAAAGCTTGCTCCTAATCA+AGG | 0.398982 | 3_3:-60251259 | None:intergenic |
ATGAAATATCAGTGGACTTA+GGG | 0.399717 | 3_3:-60254021 | None:intergenic |
TTTGCTTGAGCTTACGGGTC+AGG | 0.400682 | 3_3:+60250828 | Msa0461750:CDS |
CGCTTCTCTTTGGCTGATGC+TGG | 0.402032 | 3_3:+60254301 | Msa0461750:CDS |
GAGAAAATGTCCAAGTCTAC+TGG | 0.403043 | 3_3:+60254226 | Msa0461750:CDS |
AGGATTCTATTGTTCTGATA+AGG | 0.406687 | 3_3:+60254797 | Msa0461750:CDS |
AGGAAGCTAAGCCCTTGATT+AGG | 0.411731 | 3_3:+60251247 | Msa0461750:CDS |
TGTTGCCTGATGGGAAATAT+GGG | 0.412669 | 3_3:+60250704 | Msa0461750:CDS |
GATCAGTGGTACATTACATA+TGG | 0.412701 | 3_3:+60253677 | Msa0461750:CDS |
CAGCAAATGCGGCAATTCTC+AGG | 0.413251 | 3_3:+60254359 | Msa0461750:CDS |
AGGAGGAAGCGATGGACCTC+GGG | 0.416815 | 3_3:+60255106 | Msa0461750:CDS |
TCGAAAGTTGCTGCGAAATC+GGG | 0.418696 | 3_3:+60250217 | Msa0461750:CDS |
CACATATATAATCTCATTCA+AGG | 0.419606 | 3_3:-60250884 | None:intergenic |
GAAAATGAGAATGCTGTTGC+TGG | 0.421524 | 3_3:+60250175 | Msa0461750:CDS |
AATGGCGGAACTTCAATGAT+AGG | 0.423472 | 3_3:-60251072 | None:intergenic |
ACAATTGTGTTCAATAGTTA+CGG | 0.424593 | 3_3:+60257329 | Msa0461750:three_prime_UTR |
CTGTTGCTGGGAAATTTAAA+GGG | 0.426091 | 3_3:+60250188 | Msa0461750:CDS |
GTGGGCAAGTTTGTCTCTGT+TGG | 0.426100 | 3_3:+60257153 | Msa0461750:three_prime_UTR |
TAGTGGTTTCAATCGTGATT+TGG | 0.426126 | 3_3:+60254606 | Msa0461750:CDS |
GAAGTCCAAAGCGGCGTTTA+GGG | 0.427851 | 3_3:+60251002 | Msa0461750:CDS |
TTTATCAATGGGAGATTATG+AGG | 0.434040 | 3_3:+60250248 | Msa0461750:CDS |
TGCTGCGAAATCGGGTGGAC+AGG | 0.434221 | 3_3:+60250225 | Msa0461750:CDS |
GCGGCGTTTAGGGCGAAGTT+TGG | 0.434256 | 3_3:+60251012 | Msa0461750:CDS |
CTAGACATCACCCTCTTCTC+TGG | 0.439476 | 3_3:-60253623 | None:intergenic |
TCCAAAACCTTAAACTTCTC+AGG | 0.443670 | 3_3:-60250610 | None:intergenic |
TTTATGATCTTCAGGCTGCT+AGG | 0.449226 | 3_3:+60254557 | Msa0461750:CDS |
ACCTTAAACTTCTCAGGAAA+AGG | 0.451795 | 3_3:-60250604 | None:intergenic |
GCACACGGCTGCCCATCTAA+TGG | 0.452966 | 3_3:-60250508 | None:intergenic |
CTCTAATTCCTCGATTTCCT+CGG | 0.453600 | 3_3:-60250107 | None:intergenic |
CCAGACACCCGAAGATCAAA+TGG | 0.454786 | 3_3:-60254088 | None:intergenic |
CAAGTGAACTTGATTTCTGT+TGG | 0.456726 | 3_3:-60254886 | None:intergenic |
CTGAATTTGAGACTGCCGTT+TGG | 0.461105 | 3_3:+60255138 | Msa0461750:CDS |
TCCTTCTTATACCTTAAGAA+AGG | 0.461245 | 3_3:-60255087 | None:intergenic |
GCTGATTCTTTGGCTAAAGC+TGG | 0.462486 | 3_3:+60255255 | Msa0461750:CDS |
TCTGCATAATGCGGACAGAT+AGG | 0.462745 | 3_3:-60254667 | None:intergenic |
GATGAAATATCAGTGGACTT+AGG | 0.462778 | 3_3:-60254022 | None:intergenic |
AGCTGTTCTGGAGAATGTTA+AGG | 0.464607 | 3_3:-60254954 | None:intergenic |
CCCACGAGGCCAGTGACGCT+TGG | 0.464765 | 3_3:-60254170 | None:intergenic |
TTATGATCTTCAGGCTGCTA+GGG | 0.465497 | 3_3:+60254558 | Msa0461750:CDS |
GTCGCGTCTCATCATGATAC+AGG | 0.465889 | 3_3:-60253748 | None:intergenic |
TATTGAACACAATTGTTGAC+TGG | 0.466009 | 3_3:-60257322 | None:intergenic |
TTGCTTACCAAAATCACTCT+AGG | 0.466850 | 3_3:+60250785 | Msa0461750:CDS |
GTTTGACCATACATAGTCTC+AGG | 0.467034 | 3_3:-60250670 | None:intergenic |
AGTGTAATAAGCCATGTAAA+TGG | 0.467429 | 3_3:-60253888 | None:intergenic |
TCTTTGGCTGATGCTGGTGA+TGG | 0.467750 | 3_3:+60254307 | Msa0461750:CDS |
TCTGCGCACTTGTTTCCAAA+TGG | 0.468906 | 3_3:-60251090 | None:intergenic |
TCTCAGAATTGAGCATTAAG+TGG | 0.473084 | 3_3:-60254207 | None:intergenic |
TTGCAGAACAATGACATGTA+TGG | 0.474570 | 3_3:+60253923 | Msa0461750:CDS |
AGAAATCAAGTTCACTTGCT+TGG | 0.476785 | 3_3:+60254891 | Msa0461750:CDS |
ATGAGGAAGTTGAAGGCGTC+TGG | 0.480845 | 3_3:+60250448 | Msa0461750:CDS |
GCAGAATCTTCTATGAGAAC+AGG | 0.481745 | 3_3:+60254421 | Msa0461750:CDS |
GCCTTTCTTAAGGTATAAGA+AGG | 0.482203 | 3_3:+60255086 | Msa0461750:CDS |
GGCTCACCAAAGAGCTTACA+TGG | 0.484951 | 3_3:+60254380 | Msa0461750:CDS |
AACTATTCGTCAGGCAATTG+AGG | 0.485860 | 3_3:+60254258 | Msa0461750:CDS |
CTTTGGGCTGGTTGAATCAG+TGG | 0.488405 | 3_3:+60253786 | Msa0461750:CDS |
TTACGGGTCAGGATTTGATC+GGG | 0.488636 | 3_3:+60250839 | Msa0461750:CDS |
AGAGTATACGATTATTAAGA+TGG | 0.489000 | 3_3:+60250570 | Msa0461750:CDS |
GGCGTCTGGTAAGGTTGTTA+AGG | 0.490624 | 3_3:+60250462 | Msa0461750:CDS |
TGCAACGCCATGTAGTCATC+AGG | 0.490911 | 3_3:-60250973 | None:intergenic |
AAAGCCCCATATTTCCCATC+AGG | 0.492467 | 3_3:-60250709 | None:intergenic |
CCAAGCGTCACTGGCCTCGT+GGG | 0.492516 | 3_3:+60254170 | Msa0461750:CDS |
ATCGGATTCGACCATTTACA+TGG | 0.492952 | 3_3:+60253877 | Msa0461750:CDS |
ATCAGTGGTACATTACATAT+GGG | 0.493880 | 3_3:+60253678 | Msa0461750:CDS |
TCTGAAATTTCCAGTAGACT+TGG | 0.494172 | 3_3:-60254236 | None:intergenic |
TACATGGTTTGAAGAGACTC+TGG | 0.495450 | 3_3:+60254396 | Msa0461750:CDS |
GGTGTTTGTTGTAGCGCATA+GGG | 0.496195 | 3_3:+60250750 | Msa0461750:CDS |
TTTGGGCTGGTTGAATCAGT+GGG | 0.496656 | 3_3:+60253787 | Msa0461750:CDS |
CCCAAGCGTCACTGGCCTCG+TGG | 0.498016 | 3_3:+60254169 | Msa0461750:CDS |
TGAATGGGTGTTGCCGTTTG+AGG | 0.499476 | 3_3:+60251044 | Msa0461750:CDS |
TCTAATTCCTCGATTTCCTC+GGG | 0.502510 | 3_3:-60250106 | None:intergenic |
CAACTTTCAGGCTCAAAGAA+AGG | 0.503259 | 3_3:+60254835 | Msa0461750:CDS |
TCAGCAATTTGGTAATCCTC+CGG | 0.508383 | 3_3:+60250078 | Msa0461750:CDS |
TGGGAGATTATGAGGAGTGT+TGG | 0.511727 | 3_3:+60250256 | Msa0461750:CDS |
GAGTGCCAATAAATATCTAC+AGG | 0.511886 | 3_3:+60254777 | Msa0461750:CDS |
GAAGTTGAAGGCGTCTGGTA+AGG | 0.512881 | 3_3:+60250453 | Msa0461750:CDS |
ATGATAGGCAAAACCTCAAA+CGG | 0.513536 | 3_3:-60251057 | None:intergenic |
AGTTTGGTGTCAAGGATGAA+TGG | 0.514319 | 3_3:+60251028 | Msa0461750:CDS |
AAGAGGGTGATGTCTAGATC+TGG | 0.516950 | 3_3:+60253629 | Msa0461750:CDS |
TTACATATGGGGAGTCAGAA+TGG | 0.519024 | 3_3:+60253690 | Msa0461750:CDS |
ATAATCTCATTCAAGGAAAG+AGG | 0.519727 | 3_3:-60250877 | None:intergenic |
AGGTGTTTGTTGTAGCGCAT+AGG | 0.520012 | 3_3:+60250749 | Msa0461750:CDS |
CGGGTGGACAGGTTTATCAA+TGG | 0.520158 | 3_3:+60250236 | Msa0461750:CDS |
TTGAGGCCTGAGACTATGTA+TGG | 0.522370 | 3_3:+60250664 | Msa0461750:CDS |
GGTTCGGTTGTGATTGGAGA+CGG | 0.522440 | 3_3:+60250371 | Msa0461750:CDS |
TAGGGCGAAGTTTGGTGTCA+AGG | 0.522625 | 3_3:+60251020 | Msa0461750:CDS |
CTTACGGGTCAGGATTTGAT+CGG | 0.522696 | 3_3:+60250838 | Msa0461750:CDS |
TTCTTGCTGCGGCGACGTTG+AGG | 0.526676 | 3_3:+60250647 | Msa0461750:CDS |
TGAATGAACAATTTGACGGT+TGG | 0.526815 | 3_3:+60254920 | Msa0461750:CDS |
AAATTTCAGAACTATTCGTC+AGG | 0.526947 | 3_3:+60254249 | Msa0461750:CDS |
GATACAGGCTCATGTTAGAC+AGG | 0.527701 | 3_3:-60253733 | None:intergenic |
CATGATAGGGCTAGTGGTGA+AGG | 0.527937 | 3_3:+60250535 | Msa0461750:CDS |
GCACTCTTTAGTGTAAGGTC+AGG | 0.528765 | 3_3:-60254760 | None:intergenic |
AGATTGTCATGTGGGGCTAG+TGG | 0.528796 | 3_3:+60254589 | Msa0461750:CDS |
TACGATTATTAAGATGGAGG+TGG | 0.529151 | 3_3:+60250576 | Msa0461750:CDS |
GGGTGGACAGGTTTATCAAT+GGG | 0.529686 | 3_3:+60250237 | Msa0461750:CDS |
AGTGTGGTTGTAAAGGCAAA+AGG | 0.530282 | 3_3:-60254137 | None:intergenic |
ATGCTTGGGTGTTGCCTGAT+GGG | 0.531636 | 3_3:+60250695 | Msa0461750:CDS |
GTTCCTAGTCGAGTCTCTAT+CGG | 0.532586 | 3_3:+60253859 | Msa0461750:CDS |
TTCAAAAGAGGTTGTAGATG+TGG | 0.535476 | 3_3:+60255212 | Msa0461750:CDS |
GCAGTAGGACTTCCAGGGGA+TGG | 0.535987 | 3_3:-60255309 | None:intergenic |
AAATTGCAGTGTGGTTGTAA+AGG | 0.536059 | 3_3:-60254144 | None:intergenic |
TTTCGAGAAGCCCTAAAGAC+TGG | 0.539290 | 3_3:+60254532 | Msa0461750:CDS |
TGTATGGTCAAACAAATGCT+TGG | 0.542374 | 3_3:+60250680 | Msa0461750:CDS |
ACTGACGGAACTATGATTGT+CGG | 0.542431 | 3_3:+60251201 | Msa0461750:CDS |
AAGGAGGAAGCGATGGACCT+CGG | 0.544155 | 3_3:+60255105 | Msa0461750:CDS |
AGTTTCAGGATCCTTATAAG+TGG | 0.545032 | 3_3:+60250302 | Msa0461750:CDS |
GATAAAGATTGGAACTGCAG+TGG | 0.546313 | 3_3:+60257134 | Msa0461750:three_prime_UTR |
ATGAGTATAGATTGTCATGT+GGG | 0.547862 | 3_3:+60254581 | Msa0461750:CDS |
GCTTTACAACAGAGTTCTGT+AGG | 0.548653 | 3_3:+60255024 | Msa0461750:CDS |
AAGGAAAGAGGAGATTTCAC+AGG | 0.548807 | 3_3:-60250865 | None:intergenic |
GACTCGATCAAGAGACAGAT+AGG | 0.549673 | 3_3:+60255189 | Msa0461750:CDS |
TGAAGCTTGAGTTTGAGTAC+TGG | 0.550901 | 3_3:+60254062 | Msa0461750:CDS |
GCAACTGACTGATGATGTCT+GGG | 0.554089 | 3_3:+60253973 | Msa0461750:CDS |
ATCAAAATAAGGATTCATAT+CGG | 0.554658 | 3_3:-60250407 | None:intergenic |
AGAACCTCAATTTCACCAAA+CGG | 0.556251 | 3_3:-60255153 | None:intergenic |
TCAAAGAAAGGAAATAAGAA+AGG | 0.556298 | 3_3:+60254847 | Msa0461750:CDS |
TGACTCTCCTGATGACTACA+TGG | 0.556661 | 3_3:+60250966 | Msa0461750:CDS |
GTGGCATATGAGGAAGTTGA+AGG | 0.557101 | 3_3:+60250441 | Msa0461750:CDS |
AAACGGCAGTCTCAAATTCA+GGG | 0.557696 | 3_3:-60255136 | None:intergenic |
GTATGGTCAAACAAATGCTT+GGG | 0.558021 | 3_3:+60250681 | Msa0461750:CDS |
AGAGACAATCCTCCATCCCC+TGG | 0.558983 | 3_3:+60255297 | Msa0461750:CDS |
AAACTTACCCAGTATCTACA+TGG | 0.559581 | 3_3:-60255343 | None:intergenic |
GTTGATAAGGATAAGAATGC+TGG | 0.560148 | 3_3:+60250142 | Msa0461750:CDS |
ACTGCCGTTTGGTGAAATTG+AGG | 0.563819 | 3_3:+60255149 | Msa0461750:CDS |
TGGAAACAAGTGCGCAGAGA+CGG | 0.563991 | 3_3:+60251095 | Msa0461750:CDS |
ATAAAGATTGGAACTGCAGT+GGG | 0.565868 | 3_3:+60257135 | Msa0461750:three_prime_UTR |
GTTTGGTGTCAAGGATGAAT+GGG | 0.567640 | 3_3:+60251029 | Msa0461750:CDS |
TATGTGAATGAACAATTTGA+CGG | 0.567755 | 3_3:+60254916 | Msa0461750:CDS |
TGCTTACCAAAATCACTCTA+GGG | 0.570670 | 3_3:+60250786 | Msa0461750:CDS |
GAGACAGATAGGTTCAAAAG+AGG | 0.573315 | 3_3:+60255200 | Msa0461750:CDS |
TTAATAATCGTATACTCTTG+CGG | 0.573987 | 3_3:-60250565 | None:intergenic |
GTCTTGGCACACGTATACCA+TGG | 0.575312 | 3_3:+60253828 | Msa0461750:CDS |
TTTCTTAAGGTATAAGAAGG+AGG | 0.577926 | 3_3:+60255089 | Msa0461750:CDS |
AAGAAACAAACATACTTGAA+AGG | 0.579500 | 3_3:+60251174 | Msa0461750:CDS |
GTATAAGAAGGAGGAAGCGA+TGG | 0.580076 | 3_3:+60255098 | Msa0461750:CDS |
GTACAGTGAGCCAGAGAAGA+GGG | 0.580499 | 3_3:+60253613 | Msa0461750:CDS |
CCTCGTGGGTTTAGATGCAA+TGG | 0.582231 | 3_3:+60254184 | Msa0461750:CDS |
GCCGTGTGCGGATCATGATA+GGG | 0.582314 | 3_3:+60250522 | Msa0461750:CDS |
AAAAGCTTGCTCCTAATCAA+GGG | 0.583127 | 3_3:-60251258 | None:intergenic |
ATGGGCAAGAAGACGGCAGT+AGG | 0.584751 | 3_3:-60255324 | None:intergenic |
ATTAGATGGGCAGCCGTGTG+CGG | 0.586231 | 3_3:+60250510 | Msa0461750:CDS |
TTCTTGCCCATGTAGATACT+GGG | 0.588266 | 3_3:+60255336 | Msa0461750:exon |
AAAGTTGCTGCGAAATCGGG+TGG | 0.590795 | 3_3:+60250220 | Msa0461750:CDS |
AATGCTTGGGTGTTGCCTGA+TGG | 0.597981 | 3_3:+60250694 | Msa0461750:CDS |
GCGCACTTGTTTCCAAATGG+CGG | 0.598780 | 3_3:-60251087 | None:intergenic |
GTAGGACTTCCAGGGGATGG+AGG | 0.599100 | 3_3:-60255306 | None:intergenic |
ACATCATCAGTCAGTTGCTG+AGG | 0.601580 | 3_3:-60253968 | None:intergenic |
TATCATGATGAGACGCGACA+TGG | 0.601773 | 3_3:+60253752 | Msa0461750:CDS |
CAAATAAACTCTGCATAATG+CGG | 0.603242 | 3_3:-60254676 | None:intergenic |
TATCTACATGGGCAAGAAGA+CGG | 0.604927 | 3_3:-60255331 | None:intergenic |
ATATCAGTGGACTTAGGGAA+AGG | 0.609848 | 3_3:-60254016 | None:intergenic |
TGTGTTTGAGACAGCAAATG+CGG | 0.611103 | 3_3:+60254348 | Msa0461750:CDS |
AGGTCAGGAGCATCCGCTGT+TGG | 0.612362 | 3_3:-60254745 | None:intergenic |
TCCATCAAAATAGACAACAT+AGG | 0.613893 | 3_3:-60250910 | None:intergenic |
AACGGATGATGAAATATCAG+TGG | 0.613984 | 3_3:-60254029 | None:intergenic |
GTTTGTTGTAGCGCATAGGG+CGG | 0.614359 | 3_3:+60250753 | Msa0461750:CDS |
TCTTGGCACACGTATACCAT+GGG | 0.614967 | 3_3:+60253829 | Msa0461750:CDS |
GTTTCAATCGTGATTTGGTG+CGG | 0.619319 | 3_3:+60254611 | Msa0461750:CDS |
TGTACAGTGAGCCAGAGAAG+AGG | 0.620900 | 3_3:+60253612 | Msa0461750:CDS |
ACTAGGAACTGTTCATCCCA+TGG | 0.622213 | 3_3:-60253845 | None:intergenic |
GAAGGCAGGTTGGCCAACAG+CGG | 0.624208 | 3_3:+60254732 | Msa0461750:CDS |
AGACGGCAGTAGGACTTCCA+GGG | 0.624579 | 3_3:-60255314 | None:intergenic |
AGGAGAGTCACTAGGCACAC+TGG | 0.625764 | 3_3:-60250953 | None:intergenic |
AAAATGAGAATGCTGTTGCT+GGG | 0.626996 | 3_3:+60250176 | Msa0461750:CDS |
AACTTCAGCATGTTCTCACA+AGG | 0.630542 | 3_3:-60257183 | None:intergenic |
TAGTCATCAGGAGAGTCACT+AGG | 0.633101 | 3_3:-60250961 | None:intergenic |
TTAAGATCATCAACAGCCAA+CGG | 0.634238 | 3_3:-60250340 | None:intergenic |
AGCAAACAAGTCGGTCTCTG+AGG | 0.634515 | 3_3:-60250811 | None:intergenic |
TACTTGAAAGGATTCACTGA+CGG | 0.634539 | 3_3:+60251186 | Msa0461750:CDS |
GGAGGAAGCGATGGACCTCG+GGG | 0.637388 | 3_3:+60255107 | Msa0461750:CDS |
AGGCACACTGGTCACCACTC+CGG | 0.645744 | 3_3:-60250941 | None:intergenic |
GTATACGATTATTAAGATGG+AGG | 0.648854 | 3_3:+60250573 | Msa0461750:CDS |
CACGAGGCCAGTGACGCTTG+GGG | 0.655463 | 3_3:-60254168 | None:intergenic |
GTTGCCTGATGGGAAATATG+GGG | 0.656515 | 3_3:+60250705 | Msa0461750:CDS |
GATAAGGATAAGAATGCTGG+TGG | 0.656941 | 3_3:+60250145 | Msa0461750:CDS |
GCCCTATCATGATCCGCACA+CGG | 0.658647 | 3_3:-60250523 | None:intergenic |
AACTTACCCAGTATCTACAT+GGG | 0.658872 | 3_3:-60255342 | None:intergenic |
GATGAGTATAGATTGTCATG+TGG | 0.664637 | 3_3:+60254580 | Msa0461750:CDS |
TCAGTGGTACATTACATATG+GGG | 0.664658 | 3_3:+60253679 | Msa0461750:CDS |
ACACGATCAGCATAGATAGA+CGG | 0.667879 | 3_3:-60254448 | None:intergenic |
GCGGATCATGATAGGGCTAG+TGG | 0.668176 | 3_3:+60250529 | Msa0461750:CDS |
TCCGGAATCAGAAATTATGG+CGG | 0.689567 | 3_3:+60255002 | Msa0461750:CDS |
TGAGTATAGATTGTCATGTG+GGG | 0.690050 | 3_3:+60254582 | Msa0461750:CDS |
CGATCAGCATAGATAGACGG+TGG | 0.694172 | 3_3:-60254445 | None:intergenic |
GACGGCAGTAGGACTTCCAG+GGG | 0.699615 | 3_3:-60255313 | None:intergenic |
AATCCGATAGAGACTCGACT+AGG | 0.700123 | 3_3:-60253862 | None:intergenic |
AATTCAGGGCTTGAGCCCCG+AGG | 0.700721 | 3_3:-60255122 | None:intergenic |
AGATCATCAACAGCCAACGG+CGG | 0.709945 | 3_3:-60250337 | None:intergenic |
TTGTAGCTCTGACAGATCAG+TGG | 0.710938 | 3_3:+60253663 | Msa0461750:CDS |
GATGGATAAAGGTACCGGAG+TGG | 0.717470 | 3_3:+60250927 | Msa0461750:CDS |
GTAAGCTCAAGCAAACAAGT+CGG | 0.723183 | 3_3:-60250820 | None:intergenic |
GCAGGATCTGAAGTCCAAAG+CGG | 0.754939 | 3_3:+60250993 | Msa0461750:CDS |
CCATTGCATCTAAACCCACG+AGG | 0.758499 | 3_3:-60254184 | None:intergenic |
GCTTGGGGAAAATTGCAGTG+TGG | 0.777480 | 3_3:-60254153 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTATATTGATAATTTTAAA+AGG | - | chr3_3:60251340-60251359 | None:intergenic | 10.0% |
!! | ATAAAATAATGAAGTTATTA+TGG | - | chr3_3:60252929-60252948 | None:intergenic | 10.0% |
!!! | TAATAACTTCATTATTTTAT+AGG | + | chr3_3:60252929-60252948 | Msa0461750:intron | 10.0% |
!!! | AATAACTTCATTATTTTATA+GGG | + | chr3_3:60252930-60252949 | Msa0461750:intron | 10.0% |
!!! | ACTATGATAATAATTTTTTT+TGG | - | chr3_3:60255970-60255989 | None:intergenic | 10.0% |
!! | TTAAATAATGAATAATTCAT+AGG | - | chr3_3:60256331-60256350 | None:intergenic | 10.0% |
!! | AATGAAAAAATTATTGAAAT+CGG | - | chr3_3:60256356-60256375 | None:intergenic | 10.0% |
!!! | ATTTGTTATAGAAATTTTCT+GGG | - | chr3_3:60252219-60252238 | None:intergenic | 15.0% |
!!! | AATTTGTTATAGAAATTTTC+TGG | - | chr3_3:60252220-60252239 | None:intergenic | 15.0% |
!! | ATGGTATTTAATATAGAATA+GGG | - | chr3_3:60253110-60253129 | None:intergenic | 15.0% |
!! | TATGGTATTTAATATAGAAT+AGG | - | chr3_3:60253111-60253130 | None:intergenic | 15.0% |
!!! | TTTAAAACACAATAAAAACA+TGG | - | chr3_3:60255545-60255564 | None:intergenic | 15.0% |
!!! | GTTTTTATTGTGTTTTAAAT+AGG | + | chr3_3:60255546-60255565 | Msa0461750:intron | 15.0% |
!! | ATGAAAAAATTATTGAAATC+GGG | - | chr3_3:60256355-60256374 | None:intergenic | 15.0% |
!! | AAATATTAATTACTGTGAAA+GGG | - | chr3_3:60256387-60256406 | None:intergenic | 15.0% |
!! | ATCAAAATAAGGATTCATAT+CGG | - | chr3_3:60250410-60250429 | None:intergenic | 20.0% |
!! | ATTTAAAGATAAGAAAGTTC+AGG | + | chr3_3:60251227-60251246 | Msa0461750:CDS | 20.0% |
!!! | TCAATTTTTTTTTACCAACT+TGG | + | chr3_3:60251367-60251386 | Msa0461750:intron | 20.0% |
!!! | CAATTTTTTTTTACCAACTT+GGG | + | chr3_3:60251368-60251387 | Msa0461750:intron | 20.0% |
!!! | AATTTTTTTTTACCAACTTG+GGG | + | chr3_3:60251369-60251388 | Msa0461750:intron | 20.0% |
!! | ACTATACACAAAATTTACTT+TGG | + | chr3_3:60251445-60251464 | Msa0461750:intron | 20.0% |
!! | AAATAGATTCAATCAAATAG+AGG | + | chr3_3:60251609-60251628 | Msa0461750:intron | 20.0% |
!! | AATAGATTCAATCAAATAGA+GGG | + | chr3_3:60251610-60251629 | Msa0461750:intron | 20.0% |
!!! | TAAAACAGATTCATATCTTT+TGG | - | chr3_3:60251697-60251716 | None:intergenic | 20.0% |
!! | TTGAAACTAGTATAATGAAA+AGG | + | chr3_3:60251937-60251956 | Msa0461750:intron | 20.0% |
!! | TCTATAAAAATCAAATACGA+TGG | - | chr3_3:60252568-60252587 | None:intergenic | 20.0% |
!!! | ATAAGATAATAGTGTTACTA+TGG | - | chr3_3:60252691-60252710 | None:intergenic | 20.0% |
!! | AAAGTATAGTTGTACATTAT+TGG | + | chr3_3:60252744-60252763 | Msa0461750:intron | 20.0% |
!!! | TTTTTATAATTCCGTATTGA+AGG | + | chr3_3:60253182-60253201 | Msa0461750:intron | 20.0% |
!!! | ACTTATAATTTTACACTTTC+AGG | + | chr3_3:60253578-60253597 | Msa0461750:intron | 20.0% |
!!! | AAGCTTCATTTTTTCTAAAA+CGG | - | chr3_3:60254050-60254069 | None:intergenic | 20.0% |
!! | AATTTCTCCTTTCTTAAAAT+AGG | + | chr3_3:60255371-60255390 | Msa0461750:intron | 20.0% |
!! | GTAATCAAATCAATTAAGAA+AGG | - | chr3_3:60255408-60255427 | None:intergenic | 20.0% |
!! | GTTCTTAATGTATATATCAT+AGG | + | chr3_3:60255481-60255500 | Msa0461750:intron | 20.0% |
!! | CTGAAAATACAAATTAGTAT+TGG | + | chr3_3:60255931-60255950 | Msa0461750:intron | 20.0% |
!!! | TTAGTTTGTATTTTTTCTTG+TGG | - | chr3_3:60255993-60256012 | None:intergenic | 20.0% |
!! | ATGGAGAAATTTAACAATAA+GGG | - | chr3_3:60256183-60256202 | None:intergenic | 20.0% |
!! | ATAATGAATAATTCATAGGT+CGG | - | chr3_3:60256327-60256346 | None:intergenic | 20.0% |
!! | AATATTAATTACTGTGAAAG+GGG | - | chr3_3:60256386-60256405 | None:intergenic | 20.0% |
!! | CAAATATTAATTACTGTGAA+AGG | - | chr3_3:60256388-60256407 | None:intergenic | 20.0% |
!! | TCACAGTAATTAATATTTGT+TGG | + | chr3_3:60256389-60256408 | Msa0461750:intron | 20.0% |
!!! | AATATTTGTTGGTTGAAATT+TGG | + | chr3_3:60256400-60256419 | Msa0461750:intron | 20.0% |
!!! | ATTTGGTTTAATTGCTTTTA+AGG | + | chr3_3:60256470-60256489 | Msa0461750:intron | 20.0% |
!!! | TGTTTTGTCAAATTACAAAA+GGG | - | chr3_3:60256682-60256701 | None:intergenic | 20.0% |
!!! | TTGTTTTGTCAAATTACAAA+AGG | - | chr3_3:60256683-60256702 | None:intergenic | 20.0% |
!! | TCATCTATATATTATCTGTT+TGG | + | chr3_3:60256871-60256890 | Msa0461750:intron | 20.0% |
!!! | ATGAATTTTGAGATAAAGAT+TGG | + | chr3_3:60257123-60257142 | Msa0461750:three_prime_UTR | 20.0% |
! | GAATTTAACTGTTGTTGATA+AGG | + | chr3_3:60250129-60250148 | Msa0461750:CDS | 25.0% |
! | AAATATGACAACCACTTATA+AGG | - | chr3_3:60250316-60250335 | None:intergenic | 25.0% |
!!! | CTAACAAAAGCATCAAAATA+AGG | - | chr3_3:60250421-60250440 | None:intergenic | 25.0% |
!!! | CTTATTTTGATGCTTTTGTT+AGG | + | chr3_3:60250419-60250438 | Msa0461750:CDS | 25.0% |
! | TTAATAATCGTATACTCTTG+CGG | - | chr3_3:60250568-60250587 | None:intergenic | 25.0% |
! | AGAGTATACGATTATTAAGA+TGG | + | chr3_3:60250570-60250589 | Msa0461750:CDS | 25.0% |
! | CACATATATAATCTCATTCA+AGG | - | chr3_3:60250887-60250906 | None:intergenic | 25.0% |
!!! | TTGTCTATTTTGATGGATAA+AGG | + | chr3_3:60250916-60250935 | Msa0461750:CDS | 25.0% |
!! | TTTCAAGTATGTTTGTTTCT+TGG | - | chr3_3:60251175-60251194 | None:intergenic | 25.0% |
! | AAGAAACAAACATACTTGAA+AGG | + | chr3_3:60251174-60251193 | Msa0461750:CDS | 25.0% |
!! | GTAAATTTTGTGTATAGTTG+AGG | - | chr3_3:60251443-60251462 | None:intergenic | 25.0% |
! | AAGATAGAGCAAAATCAATA+TGG | + | chr3_3:60251641-60251660 | Msa0461750:intron | 25.0% |
! | TTATGCCTTGGTTATAAAAA+TGG | + | chr3_3:60251769-60251788 | Msa0461750:intron | 25.0% |
!!! | CAATACCATTTTTATAACCA+AGG | - | chr3_3:60251777-60251796 | None:intergenic | 25.0% |
! | AGATTAGAATACTGTATACT+AGG | - | chr3_3:60252064-60252083 | None:intergenic | 25.0% |
!! | ATTTGAGTTATTATGCAACT+AGG | - | chr3_3:60252126-60252145 | None:intergenic | 25.0% |
! | ATTTCTGTTAATTGTTCTTG+TGG | - | chr3_3:60252180-60252199 | None:intergenic | 25.0% |
! | AAGTCAAGTTATTGATAAGT+AGG | - | chr3_3:60252393-60252412 | None:intergenic | 25.0% |
!! | ATCAATAACTTGACTTTTGA+AGG | + | chr3_3:60252397-60252416 | Msa0461750:intron | 25.0% |
!!! | TACCACATTGTTTTTGTATT+TGG | + | chr3_3:60252427-60252446 | Msa0461750:intron | 25.0% |
! | AGAAGAAACTATTGATAAGT+AGG | - | chr3_3:60252478-60252497 | None:intergenic | 25.0% |
!!! | GAAAAATAGTAGTTTTGCAT+TGG | + | chr3_3:60252968-60252987 | Msa0461750:intron | 25.0% |
! | AATGTTTAGTTGTACATCAT+CGG | + | chr3_3:60253151-60253170 | Msa0461750:intron | 25.0% |
!!! | CTTCTAAAATTACCAATATG+GGG | - | chr3_3:60253245-60253264 | None:intergenic | 25.0% |
!!! | CCTTCTAAAATTACCAATAT+GGG | - | chr3_3:60253246-60253265 | None:intergenic | 25.0% |
!!! | TCCTTCTAAAATTACCAATA+TGG | - | chr3_3:60253247-60253266 | None:intergenic | 25.0% |
! | CTTTGCATTCTTATTACATA+TGG | + | chr3_3:60253296-60253315 | Msa0461750:intron | 25.0% |
! | AACAAATTATGAGATGTATG+AGG | - | chr3_3:60253335-60253354 | None:intergenic | 25.0% |
!!! | AATTTCTAGTTGTAAAGAAC+AGG | - | chr3_3:60253375-60253394 | None:intergenic | 25.0% |
! | CTTTACAACTAGAAATTTAG+AGG | + | chr3_3:60253378-60253397 | Msa0461750:intron | 25.0% |
!! | CATTTTGTGCTAATAATGAA+TGG | + | chr3_3:60253450-60253469 | Msa0461750:intron | 25.0% |
! | AGAATCCTGTAGATATTTAT+TGG | - | chr3_3:60254785-60254804 | None:intergenic | 25.0% |
! | TCAAAGAAAGGAAATAAGAA+AGG | + | chr3_3:60254847-60254866 | Msa0461750:CDS | 25.0% |
! | TATGTGAATGAACAATTTGA+CGG | + | chr3_3:60254916-60254935 | Msa0461750:CDS | 25.0% |
! | ATCAAATCAATTAAGAAAGG+AGG | - | chr3_3:60255405-60255424 | None:intergenic | 25.0% |
!!! | ATTGTTAGTTTTGATGGTTT+TGG | - | chr3_3:60255679-60255698 | None:intergenic | 25.0% |
! | AACCATCAAAACTAACAATA+AGG | + | chr3_3:60255680-60255699 | Msa0461750:intron | 25.0% |
! | ACCATCAAAACTAACAATAA+GGG | + | chr3_3:60255681-60255700 | Msa0461750:intron | 25.0% |
! | TGAACATGATACATGAAATT+TGG | - | chr3_3:60255878-60255897 | None:intergenic | 25.0% |
! | GAAATTTAACAATAAGGGAT+AGG | - | chr3_3:60256178-60256197 | None:intergenic | 25.0% |
! | CATGGAGAAATTTAACAATA+AGG | - | chr3_3:60256184-60256203 | None:intergenic | 25.0% |
! | TTAAATTTCTCCATGAACAT+TGG | + | chr3_3:60256189-60256208 | Msa0461750:intron | 25.0% |
! | TAAATTTCTCCATGAACATT+GGG | + | chr3_3:60256190-60256209 | Msa0461750:intron | 25.0% |
! | AAACACATGACAAAATATGA+AGG | - | chr3_3:60256280-60256299 | None:intergenic | 25.0% |
! | TAATGAATAATTCATAGGTC+GGG | - | chr3_3:60256326-60256345 | None:intergenic | 25.0% |
! | TCTAGATTTATGGATAGATT+TGG | + | chr3_3:60256453-60256472 | Msa0461750:intron | 25.0% |
!! | TTTTGTCAAATTACAAAAGG+GGG | - | chr3_3:60256680-60256699 | None:intergenic | 25.0% |
!! | GTTTTGTCAAATTACAAAAG+GGG | - | chr3_3:60256681-60256700 | None:intergenic | 25.0% |
! | TGTAATTTGACAAAACAAAC+AGG | + | chr3_3:60256685-60256704 | Msa0461750:intron | 25.0% |
!! | TTCAAAAGCATATGTTAACT+AGG | + | chr3_3:60256846-60256865 | Msa0461750:intron | 25.0% |
!! | TGCTTTTATGTGAAAAGTTT+TGG | + | chr3_3:60256923-60256942 | Msa0461750:intron | 25.0% |
!! | TTTTATTAGAGAAGAGGTAA+TGG | + | chr3_3:60257010-60257029 | Msa0461750:intron | 25.0% |
! | ACAATTGTGTTCAATAGTTA+CGG | + | chr3_3:60257329-60257348 | Msa0461750:three_prime_UTR | 25.0% |
!! | ACTTGAGAATATTTTGTGTT+TGG | + | chr3_3:60257359-60257378 | Msa0461750:three_prime_UTR | 25.0% |
TTTATCAATGGGAGATTATG+AGG | + | chr3_3:60250248-60250267 | Msa0461750:CDS | 30.0% | |
TATATCTGATGCTGAGATTT+CGG | + | chr3_3:60250279-60250298 | Msa0461750:CDS | 30.0% | |
!! | TTGATGATCTTAAGGCTTTT+GGG | + | chr3_3:60250350-60250369 | Msa0461750:CDS | 30.0% |
!! | ATTTTGATGCTTTTGTTAGG+TGG | + | chr3_3:60250422-60250441 | Msa0461750:CDS | 30.0% |
TGTTAAGGATGTTAGGTATA+CGG | + | chr3_3:60250477-60250496 | Msa0461750:CDS | 30.0% | |
GTATACGATTATTAAGATGG+AGG | + | chr3_3:60250573-60250592 | Msa0461750:CDS | 30.0% | |
!!! | GGCTTTTGAGATTAATGAAA+CGG | + | chr3_3:60250726-60250745 | Msa0461750:CDS | 30.0% |
!!! | TTTTGAGATTAATGAAACGG+AGG | + | chr3_3:60250729-60250748 | Msa0461750:CDS | 30.0% |
ATAATCTCATTCAAGGAAAG+AGG | - | chr3_3:60250880-60250899 | None:intergenic | 30.0% | |
!! | TCCTATGTTGTCTATTTTGA+TGG | + | chr3_3:60250909-60250928 | Msa0461750:CDS | 30.0% |
TCCATCAAAATAGACAACAT+AGG | - | chr3_3:60250913-60250932 | None:intergenic | 30.0% | |
!! | ATTTTGATGGATAAAGGTAC+CGG | + | chr3_3:60250922-60250941 | Msa0461750:CDS | 30.0% |
TACTTTGGTGAAATATGCAA+AGG | + | chr3_3:60251460-60251479 | Msa0461750:intron | 30.0% | |
!!! | CATTCCACACTTTTTCTAAA+TGG | + | chr3_3:60251496-60251515 | Msa0461750:intron | 30.0% |
CTAATCTTATACTCATTTGG+AGG | - | chr3_3:60251538-60251557 | None:intergenic | 30.0% | |
CTCCAAATGAGTATAAGATT+AGG | + | chr3_3:60251536-60251555 | Msa0461750:intron | 30.0% | |
TGCCTAATCTTATACTCATT+TGG | - | chr3_3:60251541-60251560 | None:intergenic | 30.0% | |
AGTTTCATTCATGTGATAAC+TGG | + | chr3_3:60251806-60251825 | Msa0461750:intron | 30.0% | |
TTATAGATTGTTCACTTCCA+TGG | + | chr3_3:60251891-60251910 | Msa0461750:intron | 30.0% | |
! | TGGTATTTTTCCACAAAGTT+AGG | - | chr3_3:60252097-60252116 | None:intergenic | 30.0% |
! | AAGTAGTATATCTAAGGCAA+AGG | - | chr3_3:60252332-60252351 | None:intergenic | 30.0% |
TGCCAAATACAAAAACAATG+TGG | - | chr3_3:60252432-60252451 | None:intergenic | 30.0% | |
TTCATTGTAACTAACCATTG+AGG | - | chr3_3:60252864-60252883 | None:intergenic | 30.0% | |
TGTTGGAAAATGATGAAAAG+TGG | - | chr3_3:60253031-60253050 | None:intergenic | 30.0% | |
CAGAAATGGAAATATCATGT+TGG | - | chr3_3:60253048-60253067 | None:intergenic | 30.0% | |
! | AATGCAATTTTCAGCATGTA+TGG | - | chr3_3:60253129-60253148 | None:intergenic | 30.0% |
CATGTAGTAAACCTTCAATA+CGG | - | chr3_3:60253196-60253215 | None:intergenic | 30.0% | |
! | TTTTGAATTCTACCCCATAT+TGG | + | chr3_3:60253230-60253249 | Msa0461750:intron | 30.0% |
!! | CCCATATTGGTAATTTTAGA+AGG | + | chr3_3:60253243-60253262 | Msa0461750:intron | 30.0% |
TTAGAAGGAAACTACAGTAA+AGG | + | chr3_3:60253258-60253277 | Msa0461750:intron | 30.0% | |
!! | TAATTTTACACTTTCAGGTG+AGG | + | chr3_3:60253583-60253602 | Msa0461750:intron | 30.0% |
ATCAGTGGTACATTACATAT+GGG | + | chr3_3:60253678-60253697 | Msa0461750:CDS | 30.0% | |
AGTGTAATAAGCCATGTAAA+TGG | - | chr3_3:60253891-60253910 | None:intergenic | 30.0% | |
! | ATGAAATATCAGTGGACTTA+GGG | - | chr3_3:60254024-60254043 | None:intergenic | 30.0% |
AAATTTCAGAACTATTCGTC+AGG | + | chr3_3:60254249-60254268 | Msa0461750:CDS | 30.0% | |
!!! | ATTTTGCTCAGTTGTTTTGA+CGG | - | chr3_3:60254497-60254516 | None:intergenic | 30.0% |
ATCATAAAAGCCAGTCTTTA+GGG | - | chr3_3:60254545-60254564 | None:intergenic | 30.0% | |
ATGAGTATAGATTGTCATGT+GGG | + | chr3_3:60254581-60254600 | Msa0461750:CDS | 30.0% | |
CAAATAAACTCTGCATAATG+CGG | - | chr3_3:60254679-60254698 | None:intergenic | 30.0% | |
AGGATTCTATTGTTCTGATA+AGG | + | chr3_3:60254797-60254816 | Msa0461750:CDS | 30.0% | |
AGTTATGTATGCCTTTCTTA+AGG | + | chr3_3:60255076-60255095 | Msa0461750:CDS | 30.0% | |
TCCTTCTTATACCTTAAGAA+AGG | - | chr3_3:60255090-60255109 | None:intergenic | 30.0% | |
TTTCTTAAGGTATAAGAAGG+AGG | + | chr3_3:60255089-60255108 | Msa0461750:CDS | 30.0% | |
AAATCAATTAAGAAAGGAGG+AGG | - | chr3_3:60255402-60255421 | None:intergenic | 30.0% | |
ACTATACTAGTATTCTCACT+TGG | - | chr3_3:60255577-60255596 | None:intergenic | 30.0% | |
GAGAATACTAGTATAGTCAA+TGG | + | chr3_3:60255580-60255599 | Msa0461750:intron | 30.0% | |
!!! | TCCCTTATTGTTAGTTTTGA+TGG | - | chr3_3:60255685-60255704 | None:intergenic | 30.0% |
!! | ACTGATTTTTACACATACAC+AGG | - | chr3_3:60255830-60255849 | None:intergenic | 30.0% |
! | GTCTATTTCTCGTCAAAATT+TGG | - | chr3_3:60256048-60256067 | None:intergenic | 30.0% |
AATAAGCATGACAACACTAA+AGG | - | chr3_3:60256248-60256267 | None:intergenic | 30.0% | |
AATGAATAATTCATAGGTCG+GGG | - | chr3_3:60256325-60256344 | None:intergenic | 30.0% | |
! | TTGTTGGTTGAAATTTGGTT+TGG | + | chr3_3:60256405-60256424 | Msa0461750:intron | 30.0% |
! | GTGGTTTTCACGAAAAATTT+TGG | + | chr3_3:60256520-60256539 | Msa0461750:intron | 30.0% |
AAGGATTTGCAAAATGAGTT+CGG | + | chr3_3:60256761-60256780 | Msa0461750:intron | 30.0% | |
!! | TTGACGTTTTATTAGAGAAG+AGG | + | chr3_3:60257004-60257023 | Msa0461750:intron | 30.0% |
! | GTAATGGAGATGAAATTAAG+AGG | + | chr3_3:60257026-60257045 | Msa0461750:intron | 30.0% |
TATTGAACACAATTGTTGAC+TGG | - | chr3_3:60257325-60257344 | None:intergenic | 30.0% | |
! | GTTGATAAGGATAAGAATGC+TGG | + | chr3_3:60250142-60250161 | Msa0461750:CDS | 35.0% |
AAAATGAGAATGCTGTTGCT+GGG | + | chr3_3:60250176-60250195 | Msa0461750:CDS | 35.0% | |
CTGTTGCTGGGAAATTTAAA+GGG | + | chr3_3:60250188-60250207 | Msa0461750:CDS | 35.0% | |
AGTTTCAGGATCCTTATAAG+TGG | + | chr3_3:60250302-60250321 | Msa0461750:CDS | 35.0% | |
TTAAGATCATCAACAGCCAA+CGG | - | chr3_3:60250343-60250362 | None:intergenic | 35.0% | |
!!! | GTTGATGATCTTAAGGCTTT+TGG | + | chr3_3:60250349-60250368 | Msa0461750:CDS | 35.0% |
GTAAGGTTGTTAAGGATGTT+AGG | + | chr3_3:60250470-60250489 | Msa0461750:CDS | 35.0% | |
TACGATTATTAAGATGGAGG+TGG | + | chr3_3:60250576-60250595 | Msa0461750:CDS | 35.0% | |
ACCTTAAACTTCTCAGGAAA+AGG | - | chr3_3:60250607-60250626 | None:intergenic | 35.0% | |
!! | TCCTGAGAAGTTTAAGGTTT+TGG | + | chr3_3:60250609-60250628 | Msa0461750:CDS | 35.0% |
TCCAAAACCTTAAACTTCTC+AGG | - | chr3_3:60250613-60250632 | None:intergenic | 35.0% | |
!! | TGAGAAGTTTAAGGTTTTGG+AGG | + | chr3_3:60250612-60250631 | Msa0461750:CDS | 35.0% |
!!! | GAGAAGTTTAAGGTTTTGGA+GGG | + | chr3_3:60250613-60250632 | Msa0461750:CDS | 35.0% |
! | AAAGAAGGTTTTTCTTGCTG+CGG | + | chr3_3:60250636-60250655 | Msa0461750:CDS | 35.0% |
TGTATGGTCAAACAAATGCT+TGG | + | chr3_3:60250680-60250699 | Msa0461750:CDS | 35.0% | |
GTATGGTCAAACAAATGCTT+GGG | + | chr3_3:60250681-60250700 | Msa0461750:CDS | 35.0% | |
TTGCTTACCAAAATCACTCT+AGG | + | chr3_3:60250785-60250804 | Msa0461750:CDS | 35.0% | |
TGCTTACCAAAATCACTCTA+GGG | + | chr3_3:60250786-60250805 | Msa0461750:CDS | 35.0% | |
ATGATAGGCAAAACCTCAAA+CGG | - | chr3_3:60251060-60251079 | None:intergenic | 35.0% | |
!! | GAGATTTGATTTTCATCTCC+AGG | - | chr3_3:60251125-60251144 | None:intergenic | 35.0% |
TACTTGAAAGGATTCACTGA+CGG | + | chr3_3:60251186-60251205 | Msa0461750:CDS | 35.0% | |
! | AAAAGCTTGCTCCTAATCAA+GGG | - | chr3_3:60251261-60251280 | None:intergenic | 35.0% |
!! | TTAATTAACTTGCCCCAAGT+TGG | - | chr3_3:60251384-60251403 | None:intergenic | 35.0% |
CCTTCCATTTAGAAAAAGTG+TGG | - | chr3_3:60251503-60251522 | None:intergenic | 35.0% | |
!!! | CCACACTTTTTCTAAATGGA+AGG | + | chr3_3:60251500-60251519 | Msa0461750:intron | 35.0% |
!! | TCTAGTTCACCTTTTACCAA+GGG | - | chr3_3:60251565-60251584 | None:intergenic | 35.0% |
TTACTGTCATCTCTGATACA+TGG | + | chr3_3:60251666-60251685 | Msa0461750:intron | 35.0% | |
CAAGCAAAATGTTGCTCAAA+TGG | + | chr3_3:60251727-60251746 | Msa0461750:intron | 35.0% | |
CAATGGTAACAATTATGCCT+TGG | + | chr3_3:60251757-60251776 | Msa0461750:intron | 35.0% | |
CATGAAATTCAAAGGACTCT+AGG | - | chr3_3:60251854-60251873 | None:intergenic | 35.0% | |
GTGCATCACATGAAATTCAA+AGG | - | chr3_3:60251862-60251881 | None:intergenic | 35.0% | |
ATTATGCAACTAGGTTGTGA+TGG | - | chr3_3:60252117-60252136 | None:intergenic | 35.0% | |
GCATAGATAAACAGAAAGTG+TGG | + | chr3_3:60252289-60252308 | Msa0461750:intron | 35.0% | |
ACCAGGAAGTAGTATATCTA+AGG | - | chr3_3:60252338-60252357 | None:intergenic | 35.0% | |
TTAGATATACTACTTCCTGG+TGG | + | chr3_3:60252337-60252356 | Msa0461750:intron | 35.0% | |
ATTGTAAATCTACAACCACC+AGG | - | chr3_3:60252355-60252374 | None:intergenic | 35.0% | |
TGATAAGTAGGCAATAGAGT+AGG | - | chr3_3:60252466-60252485 | None:intergenic | 35.0% | |
! | AATTTTGTGTGTGACCATTG+AGG | - | chr3_3:60252633-60252652 | None:intergenic | 35.0% |
AGTTGTAAAGAACAGGTTGT+GGG | - | chr3_3:60253368-60253387 | None:intergenic | 35.0% | |
TAGTTGTAAAGAACAGGTTG+TGG | - | chr3_3:60253369-60253388 | None:intergenic | 35.0% | |
! | AAGTTGACTCATGATATTGC+AGG | - | chr3_3:60253543-60253562 | None:intergenic | 35.0% |
GATCAGTGGTACATTACATA+TGG | + | chr3_3:60253677-60253696 | Msa0461750:CDS | 35.0% | |
TCAGTGGTACATTACATATG+GGG | + | chr3_3:60253679-60253698 | Msa0461750:CDS | 35.0% | |
!!! | ACATGGTTTTGAGCATACTT+TGG | + | chr3_3:60253769-60253788 | Msa0461750:CDS | 35.0% |
!!! | CATGGTTTTGAGCATACTTT+GGG | + | chr3_3:60253770-60253789 | Msa0461750:CDS | 35.0% |
TTGCAGAACAATGACATGTA+TGG | + | chr3_3:60253923-60253942 | Msa0461750:CDS | 35.0% | |
!! | GTCTGGGATTATATTTTCTG+TGG | + | chr3_3:60253989-60254008 | Msa0461750:CDS | 35.0% |
! | TGGGATTATATTTTCTGTGG+TGG | + | chr3_3:60253992-60254011 | Msa0461750:CDS | 35.0% |
! | GATGAAATATCAGTGGACTT+AGG | - | chr3_3:60254025-60254044 | None:intergenic | 35.0% |
AACGGATGATGAAATATCAG+TGG | - | chr3_3:60254032-60254051 | None:intergenic | 35.0% | |
ACTGGTATCCATTTGATCTT+CGG | + | chr3_3:60254080-60254099 | Msa0461750:CDS | 35.0% | |
! | GGCAAAAGGTAAGATGATTT+TGG | - | chr3_3:60254126-60254145 | None:intergenic | 35.0% |
AAATTGCAGTGTGGTTGTAA+AGG | - | chr3_3:60254147-60254166 | None:intergenic | 35.0% | |
TCTCAGAATTGAGCATTAAG+TGG | - | chr3_3:60254210-60254229 | None:intergenic | 35.0% | |
! | TCTGAAATTTCCAGTAGACT+TGG | - | chr3_3:60254239-60254258 | None:intergenic | 35.0% |
TGCTGTCTCAAACACAAAAT+TGG | - | chr3_3:60254344-60254363 | None:intergenic | 35.0% | |
TTCAAACCATGTAAGCTCTT+TGG | - | chr3_3:60254389-60254408 | None:intergenic | 35.0% | |
GACGGCAATGTTAATTTCAT+TGG | - | chr3_3:60254479-60254498 | None:intergenic | 35.0% | |
GATCATAAAAGCCAGTCTTT+AGG | - | chr3_3:60254546-60254565 | None:intergenic | 35.0% | |
GATGAGTATAGATTGTCATG+TGG | + | chr3_3:60254580-60254599 | Msa0461750:CDS | 35.0% | |
TGAGTATAGATTGTCATGTG+GGG | + | chr3_3:60254582-60254601 | Msa0461750:CDS | 35.0% | |
TAGTGGTTTCAATCGTGATT+TGG | + | chr3_3:60254606-60254625 | Msa0461750:CDS | 35.0% | |
CGCATTATGCAGAGTTTATT+TGG | + | chr3_3:60254677-60254696 | Msa0461750:CDS | 35.0% | |
!! | TTGGAGAGAGATTTTGAAGA+AGG | + | chr3_3:60254696-60254715 | Msa0461750:CDS | 35.0% |
!! | AGAGAGATTTTGAAGAAGGA+TGG | + | chr3_3:60254700-60254719 | Msa0461750:CDS | 35.0% |
!! | TTTGAAGAAGGATGGTTTTG+TGG | + | chr3_3:60254708-60254727 | Msa0461750:CDS | 35.0% |
TATTGGCACTCTTTAGTGTA+AGG | - | chr3_3:60254768-60254787 | None:intergenic | 35.0% | |
GAGTGCCAATAAATATCTAC+AGG | + | chr3_3:60254777-60254796 | Msa0461750:CDS | 35.0% | |
CAAGTGAACTTGATTTCTGT+TGG | - | chr3_3:60254889-60254908 | None:intergenic | 35.0% | |
AGAAATCAAGTTCACTTGCT+TGG | + | chr3_3:60254891-60254910 | Msa0461750:CDS | 35.0% | |
TGAATGAACAATTTGACGGT+TGG | + | chr3_3:60254920-60254939 | Msa0461750:CDS | 35.0% | |
AATCTTCGTTAAAGCTGTTC+TGG | - | chr3_3:60254969-60254988 | None:intergenic | 35.0% | |
GCCTTTCTTAAGGTATAAGA+AGG | + | chr3_3:60255086-60255105 | Msa0461750:CDS | 35.0% | |
AGAACCTCAATTTCACCAAA+CGG | - | chr3_3:60255156-60255175 | None:intergenic | 35.0% | |
TTGGTGAAATTGAGGTTCTT+CGG | + | chr3_3:60255157-60255176 | Msa0461750:CDS | 35.0% | |
TTCAAAAGAGGTTGTAGATG+TGG | + | chr3_3:60255212-60255231 | Msa0461750:CDS | 35.0% | |
AACTTACCCAGTATCTACAT+GGG | - | chr3_3:60255345-60255364 | None:intergenic | 35.0% | |
AAACTTACCCAGTATCTACA+TGG | - | chr3_3:60255346-60255365 | None:intergenic | 35.0% | |
!! | GGTGTGACCTATTTTAAGAA+AGG | - | chr3_3:60255381-60255400 | None:intergenic | 35.0% |
TTGCTCCTTCAGATAACAAT+GGG | - | chr3_3:60255611-60255630 | None:intergenic | 35.0% | |
GAAAGAGAACAATGATGAAG+TGG | - | chr3_3:60255652-60255671 | None:intergenic | 35.0% | |
TATAAAGGAATACAGAGTGC+GGG | - | chr3_3:60255795-60255814 | None:intergenic | 35.0% | |
CTATAAAGGAATACAGAGTG+CGG | - | chr3_3:60255796-60255815 | None:intergenic | 35.0% | |
AGGTACACAGGATTCTATAA+AGG | - | chr3_3:60255810-60255829 | None:intergenic | 35.0% | |
CAGTACTAGTAGTACTTCAA+TGG | + | chr3_3:60255846-60255865 | Msa0461750:intron | 35.0% | |
TCAGTAACTAGCATATCTCA+TGG | - | chr3_3:60255915-60255934 | None:intergenic | 35.0% | |
! | TCATGTGTTTCTTGTTGTGA+TGG | + | chr3_3:60256290-60256309 | Msa0461750:intron | 35.0% |
ATGAATAATTCATAGGTCGG+GGG | - | chr3_3:60256324-60256343 | None:intergenic | 35.0% | |
GCACATGAAGTCTAGATTTA+TGG | + | chr3_3:60256443-60256462 | Msa0461750:intron | 35.0% | |
! | ATCCTTTAGAGACAAAACTG+AGG | + | chr3_3:60256569-60256588 | Msa0461750:intron | 35.0% |
! | TCCTTTAGAGACAAAACTGA+GGG | + | chr3_3:60256570-60256589 | Msa0461750:intron | 35.0% |
ATCCATAAACTGAAAAGCAG+AGG | + | chr3_3:60256643-60256662 | Msa0461750:intron | 35.0% | |
TTGACAAAACAAACAGGTCA+TGG | + | chr3_3:60256691-60256710 | Msa0461750:intron | 35.0% | |
CAAACAGGTCATGGTTTATA+AGG | + | chr3_3:60256700-60256719 | Msa0461750:intron | 35.0% | |
TGAATATGCAATGTATGTGC+AGG | - | chr3_3:60256731-60256750 | None:intergenic | 35.0% | |
GCATATTCAAGTCAAGATGA+AGG | + | chr3_3:60256742-60256761 | Msa0461750:intron | 35.0% | |
TTGGATTCTTTCAGAGTTCA+TGG | + | chr3_3:60256942-60256961 | Msa0461750:intron | 35.0% | |
! | AAGAGGCATAAGTGAAGTTT+AGG | + | chr3_3:60257043-60257062 | Msa0461750:intron | 35.0% |
!!! | TAGGCTTGTTTTAATGCATC+TGG | + | chr3_3:60257062-60257081 | Msa0461750:intron | 35.0% |
!!! | CTTGTTTTAATGCATCTGGT+TGG | + | chr3_3:60257066-60257085 | Msa0461750:intron | 35.0% |
ATAAAGATTGGAACTGCAGT+GGG | + | chr3_3:60257135-60257154 | Msa0461750:three_prime_UTR | 35.0% | |
! | TCAGCAATTTGGTAATCCTC+CGG | + | chr3_3:60250078-60250097 | Msa0461750:CDS | 40.0% |
TCTAATTCCTCGATTTCCTC+GGG | - | chr3_3:60250109-60250128 | None:intergenic | 40.0% | |
CTCTAATTCCTCGATTTCCT+CGG | - | chr3_3:60250110-60250129 | None:intergenic | 40.0% | |
GATAAGGATAAGAATGCTGG+TGG | + | chr3_3:60250145-60250164 | Msa0461750:CDS | 40.0% | |
GAAAATGAGAATGCTGTTGC+TGG | + | chr3_3:60250175-60250194 | Msa0461750:CDS | 40.0% | |
GCTGTTGCTGGGAAATTTAA+AGG | + | chr3_3:60250187-60250206 | Msa0461750:CDS | 40.0% | |
ATCGAAAGTTGCTGCGAAAT+CGG | + | chr3_3:60250216-60250235 | Msa0461750:CDS | 40.0% | |
!! | GTTGGCTGTTGATGATCTTA+AGG | + | chr3_3:60250342-60250361 | Msa0461750:CDS | 40.0% |
!!! | GATCTTAAGGCTTTTGGGTT+CGG | + | chr3_3:60250355-60250374 | Msa0461750:CDS | 40.0% |
! | CTTTTGTTAGGTGGCATATG+AGG | + | chr3_3:60250431-60250450 | Msa0461750:CDS | 40.0% |
!!! | ACGGTTTTTTCGCCATTAGA+TGG | + | chr3_3:60250496-60250515 | Msa0461750:CDS | 40.0% |
!!! | CGGTTTTTTCGCCATTAGAT+GGG | + | chr3_3:60250497-60250516 | Msa0461750:CDS | 40.0% |
! | GCCTTTTCCTGAGAAGTTTA+AGG | + | chr3_3:60250603-60250622 | Msa0461750:CDS | 40.0% |
!!! | TAAGGTTTTGGAGGGAAAGA+AGG | + | chr3_3:60250621-60250640 | Msa0461750:CDS | 40.0% |
GTTTGACCATACATAGTCTC+AGG | - | chr3_3:60250673-60250692 | None:intergenic | 40.0% | |
TGTTGCCTGATGGGAAATAT+GGG | + | chr3_3:60250704-60250723 | Msa0461750:CDS | 40.0% | |
GTAAGCTCAAGCAAACAAGT+CGG | - | chr3_3:60250823-60250842 | None:intergenic | 40.0% | |
! | GACTTGTTTGCTTGAGCTTA+CGG | + | chr3_3:60250822-60250841 | Msa0461750:CDS | 40.0% |
ACTTGTTTGCTTGAGCTTAC+GGG | + | chr3_3:60250823-60250842 | Msa0461750:CDS | 40.0% | |
AAGGAAAGAGGAGATTTCAC+AGG | - | chr3_3:60250868-60250887 | None:intergenic | 40.0% | |
!! | AGTTTGGTGTCAAGGATGAA+TGG | + | chr3_3:60251028-60251047 | Msa0461750:CDS | 40.0% |
!! | GTTTGGTGTCAAGGATGAAT+GGG | + | chr3_3:60251029-60251048 | Msa0461750:CDS | 40.0% |
! | AATGGCGGAACTTCAATGAT+AGG | - | chr3_3:60251075-60251094 | None:intergenic | 40.0% |
ATCATTGAAGTTCCGCCATT+TGG | + | chr3_3:60251075-60251094 | Msa0461750:CDS | 40.0% | |
ACTGACGGAACTATGATTGT+CGG | + | chr3_3:60251201-60251220 | Msa0461750:CDS | 40.0% | |
! | CAAAAGCTTGCTCCTAATCA+AGG | - | chr3_3:60251262-60251281 | None:intergenic | 40.0% |
! | CTTGATTAGGAGCAAGCTTT+TGG | + | chr3_3:60251260-60251279 | Msa0461750:CDS | 40.0% |
GTATAAGATTAGGCATCCCT+TGG | + | chr3_3:60251546-60251565 | Msa0461750:intron | 40.0% | |
ATTAGGCATCCCTTGGTAAA+AGG | + | chr3_3:60251553-60251572 | Msa0461750:intron | 40.0% | |
!! | CTCTAGTTCACCTTTTACCA+AGG | - | chr3_3:60251566-60251585 | None:intergenic | 40.0% |
TGTCATCTCTGATACATGGA+TGG | + | chr3_3:60251670-60251689 | Msa0461750:intron | 40.0% | |
GCTCAAATGGTTAGCAACAA+TGG | + | chr3_3:60251740-60251759 | Msa0461750:intron | 40.0% | |
ATTGTTCACTTCCATGGCTA+TGG | + | chr3_3:60251897-60251916 | Msa0461750:intron | 40.0% | |
TTGTTCACTTCCATGGCTAT+GGG | + | chr3_3:60251898-60251917 | Msa0461750:intron | 40.0% | |
AGCTCTCAATTGACGTGATT+AGG | + | chr3_3:60251991-60252010 | Msa0461750:intron | 40.0% | |
GCCTTAGATATACTACTTCC+TGG | + | chr3_3:60252334-60252353 | Msa0461750:intron | 40.0% | |
CCATTGAGGCAAACAAATCA+TGG | - | chr3_3:60252619-60252638 | None:intergenic | 40.0% | |
!! | CCATGATTTGTTTGCCTCAA+TGG | + | chr3_3:60252616-60252635 | Msa0461750:intron | 40.0% |
AATGCAAGTTTGAGCATGTG+TGG | - | chr3_3:60252722-60252741 | None:intergenic | 40.0% | |
ACTGGTTAACGGTACAGAAA+TGG | - | chr3_3:60253062-60253081 | None:intergenic | 40.0% | |
TTACATATGGGGAGTCAGAA+TGG | + | chr3_3:60253690-60253709 | Msa0461750:CDS | 40.0% | |
ATCGGATTCGACCATTTACA+TGG | + | chr3_3:60253877-60253896 | Msa0461750:CDS | 40.0% | |
! | ATATCAGTGGACTTAGGGAA+AGG | - | chr3_3:60254019-60254038 | None:intergenic | 40.0% |
TGAAGCTTGAGTTTGAGTAC+TGG | + | chr3_3:60254062-60254081 | Msa0461750:CDS | 40.0% | |
CTGGTATCCATTTGATCTTC+GGG | + | chr3_3:60254081-60254100 | Msa0461750:CDS | 40.0% | |
AGTGTGGTTGTAAAGGCAAA+AGG | - | chr3_3:60254140-60254159 | None:intergenic | 40.0% | |
GAGAAAATGTCCAAGTCTAC+TGG | + | chr3_3:60254226-60254245 | Msa0461750:CDS | 40.0% | |
AACTATTCGTCAGGCAATTG+AGG | + | chr3_3:60254258-60254277 | Msa0461750:CDS | 40.0% | |
! | TGTGTTTGAGACAGCAAATG+CGG | + | chr3_3:60254348-60254367 | Msa0461750:CDS | 40.0% |
TACATGGTTTGAAGAGACTC+TGG | + | chr3_3:60254396-60254415 | Msa0461750:CDS | 40.0% | |
GCAGAATCTTCTATGAGAAC+AGG | + | chr3_3:60254421-60254440 | Msa0461750:CDS | 40.0% | |
ACACGATCAGCATAGATAGA+CGG | - | chr3_3:60254451-60254470 | None:intergenic | 40.0% | |
!!! | GACTGGCTTTTATGATCTTC+AGG | + | chr3_3:60254549-60254568 | Msa0461750:CDS | 40.0% |
TTTATGATCTTCAGGCTGCT+AGG | + | chr3_3:60254557-60254576 | Msa0461750:CDS | 40.0% | |
TTATGATCTTCAGGCTGCTA+GGG | + | chr3_3:60254558-60254577 | Msa0461750:CDS | 40.0% | |
!! | GTTTCAATCGTGATTTGGTG+CGG | + | chr3_3:60254611-60254630 | Msa0461750:CDS | 40.0% |
TTGCTTCAGAAGCAACTTTC+AGG | + | chr3_3:60254823-60254842 | Msa0461750:CDS | 40.0% | |
CAACTTTCAGGCTCAAAGAA+AGG | + | chr3_3:60254835-60254854 | Msa0461750:CDS | 40.0% | |
ATTTCTGTTGGCACTACAAC+AGG | - | chr3_3:60254877-60254896 | None:intergenic | 40.0% | |
!! | AGCTGTTCTGGAGAATGTTA+AGG | - | chr3_3:60254957-60254976 | None:intergenic | 40.0% |
! | AGATTCTCGAACTTTTGCTC+CGG | + | chr3_3:60254984-60255003 | Msa0461750:CDS | 40.0% |
TGCTCCGGAATCAGAAATTA+TGG | + | chr3_3:60254999-60255018 | Msa0461750:CDS | 40.0% | |
TCCGGAATCAGAAATTATGG+CGG | + | chr3_3:60255002-60255021 | Msa0461750:CDS | 40.0% | |
GCTTTACAACAGAGTTCTGT+AGG | + | chr3_3:60255024-60255043 | Msa0461750:CDS | 40.0% | |
AAACGGCAGTCTCAAATTCA+GGG | - | chr3_3:60255139-60255158 | None:intergenic | 40.0% | |
TGGTGAAATTGAGGTTCTTC+GGG | + | chr3_3:60255158-60255177 | Msa0461750:CDS | 40.0% | |
GAGACAGATAGGTTCAAAAG+AGG | + | chr3_3:60255200-60255219 | Msa0461750:CDS | 40.0% | |
TATCTACATGGGCAAGAAGA+CGG | - | chr3_3:60255334-60255353 | None:intergenic | 40.0% | |
TTCTTGCCCATGTAGATACT+GGG | + | chr3_3:60255336-60255355 | Msa0461750:exon | 40.0% | |
ACAGACCCATTGTTATCTGA+AGG | + | chr3_3:60255603-60255622 | Msa0461750:intron | 40.0% | |
GTTGCTCCTTCAGATAACAA+TGG | - | chr3_3:60255612-60255631 | None:intergenic | 40.0% | |
AGAGAACAATGATGAAGTGG+AGG | - | chr3_3:60255649-60255668 | None:intergenic | 40.0% | |
GGCACAGTTGATTGTGAATT+GGG | - | chr3_3:60256137-60256156 | None:intergenic | 40.0% | |
TGGCACAGTTGATTGTGAAT+TGG | - | chr3_3:60256136-60256155 | None:intergenic | 40.0% | |
TTCACAATCAACTGTGCCAT+TGG | + | chr3_3:60255729-60255748 | Msa0461750:intron | 40.0% | |
TAACCATGACATGTCTCCAA+TGG | - | chr3_3:60255748-60255767 | None:intergenic | 40.0% | |
ATAAAGGAATACAGAGTGCG+GGG | - | chr3_3:60255794-60255813 | None:intergenic | 40.0% | |
TTACACATACACAGGTACAC+AGG | - | chr3_3:60255822-60255841 | None:intergenic | 40.0% | |
ACGAGAAATAGACACTACAC+AGG | + | chr3_3:60256055-60256074 | Msa0461750:intron | 40.0% | |
TAACCATAACGTGTCTCCAA+TGG | + | chr3_3:60256116-60256135 | Msa0461750:intron | 40.0% | |
TTCACAATCAACTGTGCCAT+TGG | - | chr3_3:60255729-60255748 | None:intergenic | 40.0% | |
TGGCACAGTTGATTGTGAAT+TGG | + | chr3_3:60256136-60256155 | Msa0461750:intron | 40.0% | |
GGCACAGTTGATTGTGAATT+GGG | + | chr3_3:60256137-60256156 | Msa0461750:intron | 40.0% | |
CTTAACTCACCCAATGTTCA+TGG | - | chr3_3:60256202-60256221 | None:intergenic | 40.0% | |
TTTGTGTTTCTCCAAGCTTG+TGG | + | chr3_3:60256501-60256520 | Msa0461750:intron | 40.0% | |
TTTCGTGAAAACCACAAGCT+TGG | - | chr3_3:60256515-60256534 | None:intergenic | 40.0% | |
!! | TCCCTCAGTTTTGTCTCTAA+AGG | - | chr3_3:60256574-60256593 | None:intergenic | 40.0% |
!!! | CTGGTTGGTTTTCATTTTGC+AGG | + | chr3_3:60257081-60257100 | Msa0461750:intron | 40.0% |
GATAAAGATTGGAACTGCAG+TGG | + | chr3_3:60257134-60257153 | Msa0461750:three_prime_UTR | 40.0% | |
AACTTCAGCATGTTCTCACA+AGG | - | chr3_3:60257186-60257205 | None:intergenic | 40.0% | |
GCTAGGGAGATTCAGCAATT+TGG | + | chr3_3:60250067-60250086 | Msa0461750:CDS | 45.0% | |
TCGATTTCCTCGGGAAAAAC+CGG | - | chr3_3:60250100-60250119 | None:intergenic | 45.0% | |
TCGAAAGTTGCTGCGAAATC+GGG | + | chr3_3:60250217-60250236 | Msa0461750:CDS | 45.0% | |
GGGTGGACAGGTTTATCAAT+GGG | + | chr3_3:60250237-60250256 | Msa0461750:CDS | 45.0% | |
! | TGGGAGATTATGAGGAGTGT+TGG | + | chr3_3:60250256-60250275 | Msa0461750:CDS | 45.0% |
TGCTGAGATTTCGGAGTTTC+AGG | + | chr3_3:60250288-60250307 | Msa0461750:CDS | 45.0% | |
! | GTTGTCATATTTTCCGCCGT+TGG | + | chr3_3:60250324-60250343 | Msa0461750:CDS | 45.0% |
!!! | CTTTTGGGTTCGGTTGTGAT+TGG | + | chr3_3:60250365-60250384 | Msa0461750:CDS | 45.0% |
GTGGCATATGAGGAAGTTGA+AGG | + | chr3_3:60250441-60250460 | Msa0461750:CDS | 45.0% | |
TTGAGGCCTGAGACTATGTA+TGG | + | chr3_3:60250664-60250683 | Msa0461750:CDS | 45.0% | |
GTGTTGCCTGATGGGAAATA+TGG | + | chr3_3:60250703-60250722 | Msa0461750:CDS | 45.0% | |
GTTGCCTGATGGGAAATATG+GGG | + | chr3_3:60250705-60250724 | Msa0461750:CDS | 45.0% | |
AAAGCCCCATATTTCCCATC+AGG | - | chr3_3:60250712-60250731 | None:intergenic | 45.0% | |
!! | AGGTGTTTGTTGTAGCGCAT+AGG | + | chr3_3:60250749-60250768 | Msa0461750:CDS | 45.0% |
!! | GGTGTTTGTTGTAGCGCATA+GGG | + | chr3_3:60250750-60250769 | Msa0461750:CDS | 45.0% |
!! | GAGGTACCCTAGAGTGATTT+TGG | - | chr3_3:60250795-60250814 | None:intergenic | 45.0% |
CTTACGGGTCAGGATTTGAT+CGG | + | chr3_3:60250838-60250857 | Msa0461750:CDS | 45.0% | |
TTACGGGTCAGGATTTGATC+GGG | + | chr3_3:60250839-60250858 | Msa0461750:CDS | 45.0% | |
TAGTCATCAGGAGAGTCACT+AGG | - | chr3_3:60250964-60250983 | None:intergenic | 45.0% | |
TGACTCTCCTGATGACTACA+TGG | + | chr3_3:60250966-60250985 | Msa0461750:CDS | 45.0% | |
TCTGCGCACTTGTTTCCAAA+TGG | - | chr3_3:60251093-60251112 | None:intergenic | 45.0% | |
AGGAAGCTAAGCCCTTGATT+AGG | + | chr3_3:60251247-60251266 | Msa0461750:CDS | 45.0% | |
!! | AGGAGCAAGCTTTTGGAAAC+AGG | + | chr3_3:60251267-60251286 | Msa0461750:CDS | 45.0% |
TGTTCACTTCCATGGCTATG+GGG | + | chr3_3:60251899-60251918 | Msa0461750:intron | 45.0% | |
! | GTGTTACTATGGCTGAGAGA+CGG | - | chr3_3:60252680-60252699 | None:intergenic | 45.0% |
CCATTGAGGCAAACAGATCA+TGG | - | chr3_3:60252850-60252869 | None:intergenic | 45.0% | |
CCATGATCTGTTTGCCTCAA+TGG | + | chr3_3:60252847-60252866 | Msa0461750:intron | 45.0% | |
!! | AATGCTAAAGAGTGCCCTTG+AGG | - | chr3_3:60253086-60253105 | None:intergenic | 45.0% |
TGTAAAGAACAGGTTGTGGG+AGG | - | chr3_3:60253365-60253384 | None:intergenic | 45.0% | |
AAGAGGGTGATGTCTAGATC+TGG | + | chr3_3:60253629-60253648 | Msa0461750:CDS | 45.0% | |
!! | TTGTAGCTCTGACAGATCAG+TGG | + | chr3_3:60253663-60253682 | Msa0461750:CDS | 45.0% |
GATACAGGCTCATGTTAGAC+AGG | - | chr3_3:60253736-60253755 | None:intergenic | 45.0% | |
TATCATGATGAGACGCGACA+TGG | + | chr3_3:60253752-60253771 | Msa0461750:CDS | 45.0% | |
!! | GTTTTGAGCATACTTTGGGC+TGG | + | chr3_3:60253774-60253793 | Msa0461750:CDS | 45.0% |
!! | TTTGGGCTGGTTGAATCAGT+GGG | + | chr3_3:60253787-60253806 | Msa0461750:CDS | 45.0% |
TGCTCACGTTCATTTGGTCT+TGG | + | chr3_3:60253812-60253831 | Msa0461750:CDS | 45.0% | |
TCTTGGCACACGTATACCAT+GGG | + | chr3_3:60253829-60253848 | Msa0461750:CDS | 45.0% | |
ACTAGGAACTGTTCATCCCA+TGG | - | chr3_3:60253848-60253867 | None:intergenic | 45.0% | |
GTTCCTAGTCGAGTCTCTAT+CGG | + | chr3_3:60253859-60253878 | Msa0461750:CDS | 45.0% | |
AATCCGATAGAGACTCGACT+AGG | - | chr3_3:60253865-60253884 | None:intergenic | 45.0% | |
ACATCATCAGTCAGTTGCTG+AGG | - | chr3_3:60253971-60253990 | None:intergenic | 45.0% | |
! | AGCAACTGACTGATGATGTC+TGG | + | chr3_3:60253972-60253991 | Msa0461750:CDS | 45.0% |
! | GCAACTGACTGATGATGTCT+GGG | + | chr3_3:60253973-60253992 | Msa0461750:CDS | 45.0% |
TGATGCTACACGCTTCTCTT+TGG | + | chr3_3:60254291-60254310 | Msa0461750:CDS | 45.0% | |
TTTCGAGAAGCCCTAAAGAC+TGG | + | chr3_3:60254532-60254551 | Msa0461750:CDS | 45.0% | |
!!! | TGATTTGGTGCGGCGTTTTA+TGG | + | chr3_3:60254621-60254640 | Msa0461750:CDS | 45.0% |
TCTGCATAATGCGGACAGAT+AGG | - | chr3_3:60254670-60254689 | None:intergenic | 45.0% | |
!!! | GAAGGATGGTTTTGTGGTGA+AGG | + | chr3_3:60254714-60254733 | Msa0461750:CDS | 45.0% |
GCACTCTTTAGTGTAAGGTC+AGG | - | chr3_3:60254763-60254782 | None:intergenic | 45.0% | |
GCCGCCATAATTTCTGATTC+CGG | - | chr3_3:60255006-60255025 | None:intergenic | 45.0% | |
GTATAAGAAGGAGGAAGCGA+TGG | + | chr3_3:60255098-60255117 | Msa0461750:CDS | 45.0% | |
CAAACGGCAGTCTCAAATTC+AGG | - | chr3_3:60255140-60255159 | None:intergenic | 45.0% | |
! | CTGAATTTGAGACTGCCGTT+TGG | + | chr3_3:60255138-60255157 | Msa0461750:CDS | 45.0% |
! | ACTGCCGTTTGGTGAAATTG+AGG | + | chr3_3:60255149-60255168 | Msa0461750:CDS | 45.0% |
TGAGGTTCTTCGGGAAAACT+TGG | + | chr3_3:60255167-60255186 | Msa0461750:CDS | 45.0% | |
GACTCGATCAAGAGACAGAT+AGG | + | chr3_3:60255189-60255208 | Msa0461750:CDS | 45.0% | |
!! | TGCAGCTGATGCTGATTCTT+TGG | + | chr3_3:60255245-60255264 | Msa0461750:CDS | 45.0% |
! | GCTGATTCTTTGGCTAAAGC+TGG | + | chr3_3:60255255-60255274 | Msa0461750:CDS | 45.0% |
CTTCTTGCCCATGTAGATAC+TGG | + | chr3_3:60255335-60255354 | Msa0461750:exon | 45.0% | |
! | GAAGGAGCAACTTGTTTGAC+AGG | + | chr3_3:60255621-60255640 | Msa0461750:intron | 45.0% |
TAAAGGAATACAGAGTGCGG+GGG | - | chr3_3:60255793-60255812 | None:intergenic | 45.0% | |
AATAATTCATAGGTCGGGGG+AGG | - | chr3_3:60256321-60256340 | None:intergenic | 45.0% | |
CAAAACTGAGGGATGAAGCA+AGG | + | chr3_3:60256581-60256600 | Msa0461750:intron | 45.0% | |
GGGATGAAGCAAGGAAATGA+TGG | + | chr3_3:60256590-60256609 | Msa0461750:intron | 45.0% | |
!! | GGCCTCTGCTTTTCAGTTTA+TGG | - | chr3_3:60256648-60256667 | None:intergenic | 45.0% |
TACAAAAGGGGGTGAGCTTT+AGG | - | chr3_3:60256669-60256688 | None:intergenic | 45.0% | |
! | CGAGTGAAACCTGTTTTGCA+TGG | + | chr3_3:60256895-60256914 | Msa0461750:intron | 45.0% |
AGCAACTCACCATGCAAAAC+AGG | - | chr3_3:60256907-60256926 | None:intergenic | 45.0% | |
!! | ATAAATAAAATTTGATAAAA+AGG | - | chr3_3:60255430-60255449 | None:intergenic | 5.0% |
! | TAATCCTCCGGTTTTTCCCG+AGG | + | chr3_3:60250090-60250109 | Msa0461750:CDS | 50.0% |
ATTTCCTCGGGAAAAACCGG+AGG | - | chr3_3:60250097-60250116 | None:intergenic | 50.0% | |
! | GGTTTTTCCCGAGGAAATCG+AGG | + | chr3_3:60250099-60250118 | Msa0461750:CDS | 50.0% |
AAAGTTGCTGCGAAATCGGG+TGG | + | chr3_3:60250220-60250239 | Msa0461750:CDS | 50.0% | |
CGGGTGGACAGGTTTATCAA+TGG | + | chr3_3:60250236-60250255 | Msa0461750:CDS | 50.0% | |
AGATCATCAACAGCCAACGG+CGG | - | chr3_3:60250340-60250359 | None:intergenic | 50.0% | |
! | GGTTCGGTTGTGATTGGAGA+CGG | + | chr3_3:60250371-60250390 | Msa0461750:CDS | 50.0% |
!! | ATGAGGAAGTTGAAGGCGTC+TGG | + | chr3_3:60250448-60250467 | Msa0461750:CDS | 50.0% |
!! | GAAGTTGAAGGCGTCTGGTA+AGG | + | chr3_3:60250453-60250472 | Msa0461750:CDS | 50.0% |
GGCGTCTGGTAAGGTTGTTA+AGG | + | chr3_3:60250462-60250481 | Msa0461750:CDS | 50.0% | |
! | CATGATAGGGCTAGTGGTGA+AGG | + | chr3_3:60250535-60250554 | Msa0461750:CDS | 50.0% |
! | AATGCTTGGGTGTTGCCTGA+TGG | + | chr3_3:60250694-60250713 | Msa0461750:CDS | 50.0% |
! | ATGCTTGGGTGTTGCCTGAT+GGG | + | chr3_3:60250695-60250714 | Msa0461750:CDS | 50.0% |
!! | GTTTGTTGTAGCGCATAGGG+CGG | + | chr3_3:60250753-60250772 | Msa0461750:CDS | 50.0% |
AGCAAACAAGTCGGTCTCTG+AGG | - | chr3_3:60250814-60250833 | None:intergenic | 50.0% | |
TTTGCTTGAGCTTACGGGTC+AGG | + | chr3_3:60250828-60250847 | Msa0461750:CDS | 50.0% | |
!! | GATGGATAAAGGTACCGGAG+TGG | + | chr3_3:60250927-60250946 | Msa0461750:CDS | 50.0% |
TGCAACGCCATGTAGTCATC+AGG | - | chr3_3:60250976-60250995 | None:intergenic | 50.0% | |
TGATGACTACATGGCGTTGC+AGG | + | chr3_3:60250975-60250994 | Msa0461750:CDS | 50.0% | |
! | GCAGGATCTGAAGTCCAAAG+CGG | + | chr3_3:60250993-60251012 | Msa0461750:CDS | 50.0% |
TGAAGTCCAAAGCGGCGTTT+AGG | + | chr3_3:60251001-60251020 | Msa0461750:CDS | 50.0% | |
GAAGTCCAAAGCGGCGTTTA+GGG | + | chr3_3:60251002-60251021 | Msa0461750:CDS | 50.0% | |
!! | TAGGGCGAAGTTTGGTGTCA+AGG | + | chr3_3:60251020-60251039 | Msa0461750:CDS | 50.0% |
! | TGAATGGGTGTTGCCGTTTG+AGG | + | chr3_3:60251044-60251063 | Msa0461750:CDS | 50.0% |
GCGCACTTGTTTCCAAATGG+CGG | - | chr3_3:60251090-60251109 | None:intergenic | 50.0% | |
TGGAAACAAGTGCGCAGAGA+CGG | + | chr3_3:60251095-60251114 | Msa0461750:CDS | 50.0% | |
TGTGCGTGCTCCTAACTTTG+TGG | + | chr3_3:60252084-60252103 | Msa0461750:intron | 50.0% | |
GAGGCAAACAGATCATGGAC+AGG | - | chr3_3:60252845-60252864 | None:intergenic | 50.0% | |
TACCGTTAACCAGTGCCTCA+AGG | + | chr3_3:60253068-60253087 | Msa0461750:intron | 50.0% | |
ACCGTTAACCAGTGCCTCAA+GGG | + | chr3_3:60253069-60253088 | Msa0461750:intron | 50.0% | |
TGTACAGTGAGCCAGAGAAG+AGG | + | chr3_3:60253612-60253631 | Msa0461750:CDS | 50.0% | |
GTACAGTGAGCCAGAGAAGA+GGG | + | chr3_3:60253613-60253632 | Msa0461750:CDS | 50.0% | |
CTAGACATCACCCTCTTCTC+TGG | - | chr3_3:60253626-60253645 | None:intergenic | 50.0% | |
GTCGCGTCTCATCATGATAC+AGG | - | chr3_3:60253751-60253770 | None:intergenic | 50.0% | |
!! | CTTTGGGCTGGTTGAATCAG+TGG | + | chr3_3:60253786-60253805 | Msa0461750:CDS | 50.0% |
! | TGGGCTTGCTCACGTTCATT+TGG | + | chr3_3:60253806-60253825 | Msa0461750:CDS | 50.0% |
GTCTTGGCACACGTATACCA+TGG | + | chr3_3:60253828-60253847 | Msa0461750:CDS | 50.0% | |
CCAGACACCCGAAGATCAAA+TGG | - | chr3_3:60254091-60254110 | None:intergenic | 50.0% | |
CCATTTGATCTTCGGGTGTC+TGG | + | chr3_3:60254088-60254107 | Msa0461750:CDS | 50.0% | |
GCTTGGGGAAAATTGCAGTG+TGG | - | chr3_3:60254156-60254175 | None:intergenic | 50.0% | |
! | CAATTTTCCCCAAGCGTCAC+TGG | + | chr3_3:60254161-60254180 | Msa0461750:CDS | 50.0% |
CCATTGCATCTAAACCCACG+AGG | - | chr3_3:60254187-60254206 | None:intergenic | 50.0% | |
CCTCGTGGGTTTAGATGCAA+TGG | + | chr3_3:60254184-60254203 | Msa0461750:CDS | 50.0% | |
TCTTTGGCTGATGCTGGTGA+TGG | + | chr3_3:60254307-60254326 | Msa0461750:CDS | 50.0% | |
CAGCAAATGCGGCAATTCTC+AGG | + | chr3_3:60254359-60254378 | Msa0461750:CDS | 50.0% | |
GGCTCACCAAAGAGCTTACA+TGG | + | chr3_3:60254380-60254399 | Msa0461750:CDS | 50.0% | |
CGATCAGCATAGATAGACGG+TGG | - | chr3_3:60254448-60254467 | None:intergenic | 50.0% | |
AGATTGTCATGTGGGGCTAG+TGG | + | chr3_3:60254589-60254608 | Msa0461750:CDS | 50.0% | |
!!! | GATGGTTTTGTGGTGAAGGC+AGG | + | chr3_3:60254718-60254737 | Msa0461750:CDS | 50.0% |
! | GTTTTGTGGTGAAGGCAGGT+TGG | + | chr3_3:60254722-60254741 | Msa0461750:CDS | 50.0% |
! | GTGCCATTGGAGACATGTCA+TGG | + | chr3_3:60255742-60255761 | Msa0461750:intron | 50.0% |
CACTACACAGGTACACAGTG+CGG | + | chr3_3:60256067-60256086 | Msa0461750:intron | 50.0% | |
ACTACACAGGTACACAGTGC+GGG | + | chr3_3:60256068-60256087 | Msa0461750:intron | 50.0% | |
! | GTGCCATTGGAGACACGTTA+TGG | - | chr3_3:60256122-60256141 | None:intergenic | 50.0% |
GTGGGCAAGTTTGTCTCTGT+TGG | + | chr3_3:60257153-60257172 | Msa0461750:three_prime_UTR | 50.0% | |
ATTAGATGGGCAGCCGTGTG+CGG | + | chr3_3:60250510-60250529 | Msa0461750:CDS | 55.0% | |
AGCCGTGTGCGGATCATGAT+AGG | + | chr3_3:60250521-60250540 | Msa0461750:CDS | 55.0% | |
GCCGTGTGCGGATCATGATA+GGG | + | chr3_3:60250522-60250541 | Msa0461750:CDS | 55.0% | |
GCCCTATCATGATCCGCACA+CGG | - | chr3_3:60250526-60250545 | None:intergenic | 55.0% | |
GCGGATCATGATAGGGCTAG+TGG | + | chr3_3:60250529-60250548 | Msa0461750:CDS | 55.0% | |
AGGAGAGTCACTAGGCACAC+TGG | - | chr3_3:60250956-60250975 | None:intergenic | 55.0% | |
CAGCAAAGACCCCATAGCCA+TGG | - | chr3_3:60251911-60251930 | None:intergenic | 55.0% | |
CATGGCTATGGGGTCTTTGC+TGG | + | chr3_3:60251909-60251928 | Msa0461750:intron | 55.0% | |
!! | GCCCTTGAGGCACTGGTTAA+CGG | - | chr3_3:60253073-60253092 | None:intergenic | 55.0% |
!! | AAAGAGTGCCCTTGAGGCAC+TGG | - | chr3_3:60253080-60253099 | None:intergenic | 55.0% |
CGCTTCTCTTTGGCTGATGC+TGG | + | chr3_3:60254301-60254320 | Msa0461750:CDS | 55.0% | |
AAGGAGGAAGCGATGGACCT+CGG | + | chr3_3:60255105-60255124 | Msa0461750:CDS | 55.0% | |
AGAGACAATCCTCCATCCCC+TGG | + | chr3_3:60255297-60255316 | Msa0461750:CDS | 55.0% | |
AGACGGCAGTAGGACTTCCA+GGG | - | chr3_3:60255317-60255336 | None:intergenic | 55.0% | |
AAGACGGCAGTAGGACTTCC+AGG | - | chr3_3:60255318-60255337 | None:intergenic | 55.0% | |
ATGGGCAAGAAGACGGCAGT+AGG | - | chr3_3:60255327-60255346 | None:intergenic | 55.0% | |
CTACACAGGTACACAGTGCG+GGG | + | chr3_3:60256069-60256088 | Msa0461750:intron | 55.0% | |
TACACAGGTACACAGTGCGG+GGG | + | chr3_3:60256070-60256089 | Msa0461750:intron | 55.0% | |
TGCTGCGAAATCGGGTGGAC+AGG | + | chr3_3:60250225-60250244 | Msa0461750:CDS | 60.0% | |
GCACACGGCTGCCCATCTAA+TGG | - | chr3_3:60250511-60250530 | None:intergenic | 60.0% | |
TTCTTGCTGCGGCGACGTTG+AGG | + | chr3_3:60250647-60250666 | Msa0461750:CDS | 60.0% | |
AGGCACACTGGTCACCACTC+CGG | - | chr3_3:60250944-60250963 | None:intergenic | 60.0% | |
CTTCGCCCTAAACGCCGCTT+TGG | - | chr3_3:60251010-60251029 | None:intergenic | 60.0% | |
! | GCGGCGTTTAGGGCGAAGTT+TGG | + | chr3_3:60251012-60251031 | Msa0461750:CDS | 60.0% |
! | GAAGGCAGGTTGGCCAACAG+CGG | + | chr3_3:60254732-60254751 | Msa0461750:CDS | 60.0% |
!! | AGGTCAGGAGCATCCGCTGT+TGG | - | chr3_3:60254748-60254767 | None:intergenic | 60.0% |
AGGAGGAAGCGATGGACCTC+GGG | + | chr3_3:60255106-60255125 | Msa0461750:CDS | 60.0% | |
AATTCAGGGCTTGAGCCCCG+AGG | - | chr3_3:60255125-60255144 | None:intergenic | 60.0% | |
GTAGGACTTCCAGGGGATGG+AGG | - | chr3_3:60255309-60255328 | None:intergenic | 60.0% | |
GCAGTAGGACTTCCAGGGGA+TGG | - | chr3_3:60255312-60255331 | None:intergenic | 60.0% | |
GACGGCAGTAGGACTTCCAG+GGG | - | chr3_3:60255316-60255335 | None:intergenic | 60.0% | |
ACACAGGTACACAGTGCGGG+GGG | + | chr3_3:60256071-60256090 | Msa0461750:intron | 60.0% | |
GTGCGCAGAGACGGTTTGCC+TGG | + | chr3_3:60251104-60251123 | Msa0461750:CDS | 65.0% | |
CACGAGGCCAGTGACGCTTG+GGG | - | chr3_3:60254171-60254190 | None:intergenic | 65.0% | |
CCACGAGGCCAGTGACGCTT+GGG | - | chr3_3:60254172-60254191 | None:intergenic | 65.0% | |
! | CCAAGCGTCACTGGCCTCGT+GGG | + | chr3_3:60254170-60254189 | Msa0461750:CDS | 65.0% |
GGAGGAAGCGATGGACCTCG+GGG | + | chr3_3:60255107-60255126 | Msa0461750:CDS | 65.0% | |
TGCGGGGGGCTGCAATTGCA+TGG | + | chr3_3:60256085-60256104 | Msa0461750:intron | 65.0% | |
! | CCCAAGCGTCACTGGCCTCG+TGG | + | chr3_3:60254169-60254188 | Msa0461750:CDS | 70.0% |
CCCACGAGGCCAGTGACGCT+TGG | - | chr3_3:60254173-60254192 | None:intergenic | 70.0% | |
GTGCGGGGGCTGCAGTTGCA+TGG | - | chr3_3:60255779-60255798 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 60250061 | 60257416 | 60250061 | ID=Msa0461750;Name=Msa0461750 |
chr3_3 | mRNA | 60250061 | 60257416 | 60250061 | ID=Msa0461750-mRNA-1;Parent=Msa0461750;Name=Msa0461750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|1|1|0.5|0.33|3|321|992 |
chr3_3 | exon | 60250061 | 60251288 | 60250061 | ID=Msa0461750-mRNA-1:exon:12549;Parent=Msa0461750-mRNA-1 |
chr3_3 | exon | 60253600 | 60255357 | 60253600 | ID=Msa0461750-mRNA-1:exon:12550;Parent=Msa0461750-mRNA-1 |
chr3_3 | exon | 60257103 | 60257416 | 60257103 | ID=Msa0461750-mRNA-1:exon:12551;Parent=Msa0461750-mRNA-1 |
chr3_3 | CDS | 60250061 | 60251288 | 60250061 | ID=Msa0461750-mRNA-1:cds;Parent=Msa0461750-mRNA-1 |
chr3_3 | CDS | 60253600 | 60255350 | 60253600 | ID=Msa0461750-mRNA-1:cds;Parent=Msa0461750-mRNA-1 |
chr3_3 | three_prime_UTR | 60255351 | 60255357 | 60255351 | ID=Msa0461750-mRNA-1:three_prime_utr;Parent=Msa0461750-mRNA-1 |
chr3_3 | three_prime_UTR | 60257103 | 60257416 | 60257103 | ID=Msa0461750-mRNA-1:three_prime_utr;Parent=Msa0461750-mRNA-1 |
Gene Sequence |
Protein sequence |