AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1123350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123350 MtrunA17_Chr7g0262801 100.000 445 0 0 1 445 1 445 0.0 896
Msa1123350 MtrunA17_Chr1g0182711 96.644 447 12 2 1 445 1 446 0.0 862
Msa1123350 MtrunA17_Chr4g0050561 48.556 381 185 4 65 437 30 407 2.43e-115 344
Msa1123350 MtrunA17_Chr1g0192151 45.669 381 185 2 77 436 37 416 4.33e-112 336
Msa1123350 MtrunA17_Chr4g0014731 44.737 380 189 1 78 436 38 417 8.75e-112 335
Msa1123350 MtrunA17_Chr3g0108321 52.288 306 141 3 67 370 40 342 1.01e-111 333
Msa1123350 MtrunA17_Chr3g0145011 46.092 371 193 2 73 436 18 388 2.74e-107 323
Msa1123350 MtrunA17_Chr3g0141901 45.251 358 196 0 79 436 28 385 2.91e-105 318
Msa1123350 MtrunA17_Chr8g0345461 46.334 341 175 3 111 445 85 423 1.27e-104 317
Msa1123350 MtrunA17_Chr1g0200081 49.201 313 154 3 135 445 123 432 2.18e-101 309
Msa1123350 MtrunA17_Chr7g0264521 47.577 227 116 1 189 415 208 431 3.76e-61 213
Msa1123350 MtrunA17_Chr7g0264521 41.026 234 138 0 181 414 473 706 2.82e-53 191
Msa1123350 MtrunA17_Chr7g0217421 44.490 245 135 1 188 432 40 283 5.73e-61 203
Msa1123350 MtrunA17_Chr1g0180791 47.137 227 117 1 189 415 207 430 2.28e-60 210
Msa1123350 MtrunA17_Chr1g0180791 41.453 234 137 0 181 414 472 705 3.15e-54 193
Msa1123350 MtrunA17_Chr2g0327121 46.256 227 119 2 189 415 209 432 2.47e-56 199
Msa1123350 MtrunA17_Chr2g0327121 41.453 234 137 0 181 414 474 707 5.36e-53 190
Msa1123350 MtrunA17_Chr4g0052411 40.816 245 144 1 188 432 230 473 3.74e-56 197
Msa1123350 MtrunA17_Chr2g0297281 41.224 245 143 1 188 432 287 530 6.72e-55 194
Msa1123350 MtrunA17_Chr7g0248361 37.377 305 177 5 141 432 136 439 1.73e-54 192
Msa1123350 MtrunA17_Chr7g0255651 39.095 243 148 0 172 414 267 509 1.86e-54 191
Msa1123350 MtrunA17_Chr7g0255651 26.923 234 157 4 210 431 36 267 7.35e-19 89.4
Msa1123350 MtrunA17_Chr4g0031821 43.320 247 136 3 189 432 322 567 2.13e-54 194
Msa1123350 MtrunA17_Chr8g0388371 39.841 251 142 2 189 431 406 655 8.76e-53 190
Msa1123350 MtrunA17_Chr7g0260601 42.972 249 134 4 189 432 242 487 1.38e-52 187
Msa1123350 MtrunA17_Chr6g0476861 39.576 283 165 4 155 432 163 444 4.51e-52 186
Msa1123350 MtrunA17_Chr3g0094871 41.463 246 141 2 189 432 13 257 1.07e-51 180
Msa1123350 MtrunA17_Chr5g0429571 42.520 254 138 4 182 430 308 558 1.81e-51 185
Msa1123350 MtrunA17_Chr3g0143721 39.592 245 147 1 188 432 250 493 2.59e-51 184
Msa1123350 MtrunA17_Chr3g0104211 42.063 252 142 3 182 430 299 549 1.69e-50 182
Msa1123350 MtrunA17_Chr7g0255691 38.168 262 160 1 172 431 271 532 1.92e-49 176
Msa1123350 MtrunA17_Chr7g0255691 30.000 220 148 3 192 407 22 239 2.22e-24 105
Msa1123350 MtrunA17_Chr8g0362771 39.754 244 144 2 189 432 239 479 2.20e-48 176
Msa1123350 MtrunA17_Chr3g0135721 37.943 282 164 3 152 433 196 466 3.00e-48 176
Msa1123350 MtrunA17_Chr2g0331161 40.079 252 147 2 189 437 417 667 3.93e-48 176
Msa1123350 MtrunA17_Chr2g0316851 38.723 235 133 4 186 413 593 823 1.22e-47 176
Msa1123350 MtrunA17_Chr7g0255641 40.562 249 145 2 185 431 656 903 1.61e-47 175
Msa1123350 MtrunA17_Chr7g0255641 35.047 214 123 5 226 428 432 640 1.66e-28 119
Msa1123350 MtrunA17_Chr4g0033451 40.164 244 137 3 188 425 381 621 8.61e-47 173
Msa1123350 MtrunA17_Chr6g0456351 40.891 247 140 3 189 433 319 561 9.86e-47 170
Msa1123350 MtrunA17_Chr7g0255721 40.637 251 146 2 183 431 681 930 6.98e-46 170
Msa1123350 MtrunA17_Chr7g0255721 32.218 239 153 4 186 420 385 618 1.44e-29 122
Msa1123350 MtrunA17_Chr1g0158881 37.600 250 147 3 186 433 328 570 1.08e-45 169
Msa1123350 MtrunA17_Chr3g0135761 36.140 285 171 3 149 433 191 464 1.33e-44 165
Msa1123350 MtrunA17_Chr5g0432631 39.184 245 145 2 189 433 231 471 3.48e-43 162
Msa1123350 MtrunA17_Chr7g0255901 39.676 247 140 7 177 418 629 871 4.49e-43 162
Msa1123350 MtrunA17_Chr2g0277831 39.381 226 135 2 189 413 245 469 1.67e-42 160
Msa1123350 MtrunA17_Chr2g0277831 38.627 233 138 3 185 415 531 760 7.72e-40 152
Msa1123350 MtrunA17_Chr4g0004121 36.923 260 150 5 181 431 236 490 3.01e-42 156
Msa1123350 MtrunA17_Chr5g0397121 36.327 245 148 4 188 429 514 753 2.23e-41 157
Msa1123350 MtrunA17_Chr1g0195731 38.961 231 132 5 188 414 935 1160 7.47e-41 155
Msa1123350 MtrunA17_Chr7g0246111 36.626 243 145 5 175 414 200 436 2.28e-40 150
Msa1123350 MtrunA17_Chr1g0204031 38.261 230 134 5 188 414 558 782 3.74e-40 153
Msa1123350 MtrunA17_Chr4g0026631 35.662 272 143 11 181 445 121 367 1.01e-39 147
Msa1123350 MtrunA17_Chr3g0129971 39.149 235 132 5 188 414 297 528 1.19e-39 152
Msa1123350 MtrunA17_Chr8g0387641 35.217 230 141 4 188 414 522 746 2.02e-39 151
Msa1123350 MtrunA17_Chr4g0038101 37.391 230 135 5 189 414 723 947 2.20e-39 151
Msa1123350 MtrunA17_Chr1g0202371 37.391 230 135 5 188 414 398 621 2.47e-39 150
Msa1123350 MtrunA17_Chr1g0195741 37.662 231 135 5 188 414 939 1164 2.56e-39 151
Msa1123350 MtrunA17_Chr2g0321241 34.328 268 152 9 181 445 126 372 3.37e-39 146
Msa1123350 MtrunA17_Chr3g0116131 37.333 225 132 5 188 408 903 1122 3.61e-38 147
Msa1123350 MtrunA17_Chr4g0052271 36.170 235 143 5 181 413 113 342 9.89e-38 141
Msa1123350 MtrunA17_Chr4g0043381 34.956 226 144 1 189 414 839 1061 2.45e-37 145
Msa1123350 MtrunA17_Chr6g0462581 36.522 230 137 5 188 414 501 724 3.82e-37 144
Msa1123350 MtrunA17_Chr1g0202381 36.522 230 138 5 188 414 469 693 4.10e-37 144
Msa1123350 MtrunA17_Chr2g0327231 41.566 166 97 0 182 347 341 506 1.43e-36 140
Msa1123350 MtrunA17_Chr2g0327231 47.727 88 42 1 189 276 155 238 5.76e-19 89.4
Msa1123350 MtrunA17_Chr3g0127401 36.957 230 135 5 189 414 83 306 2.09e-36 137
Msa1123350 MtrunA17_Chr6g0459561 36.992 246 141 8 176 415 371 608 6.10e-35 137
Msa1123350 MtrunA17_Chr3g0086401 38.306 248 126 5 189 414 387 629 1.03e-34 137
Msa1123350 MtrunA17_Chr3g0086401 35.111 225 128 6 199 413 106 322 9.95e-30 122
Msa1123350 MtrunA17_Chr3g0086411 34.733 262 150 4 172 415 200 458 4.28e-34 133
Msa1123350 MtrunA17_Chr3g0086411 38.194 144 83 2 275 412 7 150 1.47e-18 87.8
Msa1123350 MtrunA17_Chr5g0432641 34.191 272 171 4 166 433 166 433 1.02e-33 134
Msa1123350 MtrunA17_Chr4g0047411 33.569 283 159 7 177 432 166 446 1.76e-33 133
Msa1123350 MtrunA17_Chr3g0127431 35.931 231 136 6 189 414 86 309 7.15e-33 128
Msa1123350 MtrunA17_Chr1g0168321 31.597 288 140 6 155 432 134 374 8.23e-33 130
Msa1123350 MtrunA17_Chr8g0357301 32.245 245 152 3 195 430 477 716 5.17e-32 129
Msa1123350 MtrunA17_Chr4g0062081 70.886 79 22 1 190 267 10 88 5.74e-32 117
Msa1123350 MtrunA17_Chr3g0135781 41.615 161 90 2 189 349 57 213 2.29e-31 119
Msa1123350 MtrunA17_Chr6g0459541 33.206 262 138 10 183 414 38 292 1.20e-30 121
Msa1123350 MtrunA17_Chr2g0289231 35.498 231 128 7 188 407 298 518 1.46e-30 124
Msa1123350 MtrunA17_Chr6g0459551 34.071 226 128 7 181 400 96 306 6.36e-26 109
Msa1123350 MtrunA17_Chr5g0432391 37.278 169 97 2 265 430 81 243 1.27e-23 102
Msa1123350 MtrunA17_Chr1g0190401 31.527 203 134 3 172 370 659 860 1.34e-22 101
Msa1123350 MtrunA17_Chr8g0372701 35.260 173 98 6 191 357 225 389 2.19e-14 75.1
Msa1123350 MtrunA17_Chr5g0404651 34.783 161 92 5 202 357 229 381 5.97e-14 73.9
Msa1123350 MtrunA17_Chr5g0404291 35.664 143 78 5 223 361 387 519 6.65e-14 73.9
Msa1123350 MtrunA17_Chr2g0292561 32.934 167 83 7 214 359 226 384 4.47e-12 67.8
Msa1123350 MtrunA17_Chr6g0466811 33.974 156 83 6 214 357 236 383 6.16e-12 67.4
Msa1123350 MtrunA17_Chr6g0452361 31.818 154 90 5 211 357 18 163 1.24e-11 65.1
Msa1123350 MtrunA17_Chr2g0315971 29.891 184 112 7 194 369 477 651 1.27e-11 67.0
Msa1123350 MtrunA17_Chr2g0315971 29.947 187 117 7 191 371 198 376 2.54e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1123350 AT4G29040.1 95.730 445 17 2 1 445 1 443 0.0 854
Msa1123350 AT2G20140.1 95.506 445 18 2 1 445 1 443 0.0 852
Msa1123350 AT5G58290.1 51.381 362 172 2 66 426 33 391 6.43e-133 389
Msa1123350 AT5G20000.1 52.000 325 155 1 114 437 85 409 2.49e-112 337
Msa1123350 AT5G19990.1 51.692 325 156 1 114 437 85 409 3.89e-112 337
Msa1123350 AT5G19990.3 51.692 325 156 1 114 437 85 409 3.89e-112 337
Msa1123350 AT5G19990.2 51.692 325 156 1 114 437 27 351 4.95e-112 334
Msa1123350 AT1G09100.1 45.526 380 186 2 78 436 37 416 1.68e-110 332
Msa1123350 AT3G05530.1 46.006 363 175 1 95 436 55 417 1.95e-110 332
Msa1123350 AT1G45000.1 46.361 371 192 3 73 436 15 385 8.75e-106 320
Msa1123350 AT5G43010.1 46.429 364 191 2 77 436 22 385 3.77e-105 318
Msa1123350 AT1G53750.1 46.199 342 176 3 110 445 84 423 3.90e-104 316
Msa1123350 AT1G53780.3 46.199 342 174 4 111 445 256 594 5.92e-98 306
Msa1123350 AT1G53780.1 46.199 342 174 4 111 445 257 595 6.40e-98 306
Msa1123350 AT1G53780.4 46.199 342 174 4 111 445 257 595 6.40e-98 306
Msa1123350 AT1G53780.2 46.199 342 174 4 111 445 278 616 1.55e-97 305
Msa1123350 AT1G45000.2 44.867 263 138 3 73 328 15 277 2.18e-67 218
Msa1123350 AT3G53230.1 47.577 227 116 1 189 415 207 430 1.21e-60 211
Msa1123350 AT3G53230.1 40.323 248 148 0 181 428 472 719 3.14e-54 194
Msa1123350 AT5G03340.1 47.137 227 117 1 189 415 206 429 6.68e-60 209
Msa1123350 AT5G03340.1 41.453 234 137 0 181 414 471 704 5.16e-53 190
Msa1123350 AT3G09840.1 47.577 227 116 2 189 415 206 429 7.31e-60 209
Msa1123350 AT3G09840.1 41.702 235 136 1 181 414 471 705 3.66e-51 185
Msa1123350 AT2G30950.1 41.633 245 142 1 188 432 225 468 9.51e-57 199
Msa1123350 AT2G30950.2 41.633 245 142 1 188 432 225 468 9.51e-57 199
Msa1123350 AT2G30950.3 41.633 245 142 1 188 432 225 468 9.51e-57 199
Msa1123350 AT2G30950.4 41.633 245 142 1 188 432 229 472 9.53e-57 199
Msa1123350 AT1G07510.1 44.130 247 134 3 189 432 326 571 2.02e-55 197
Msa1123350 AT5G15250.1 43.673 245 137 1 188 432 222 465 4.22e-55 194
Msa1123350 AT1G06430.1 40.408 245 145 1 188 432 218 461 5.51e-55 194
Msa1123350 AT1G06430.3 40.408 245 145 1 188 432 218 461 5.51e-55 194
Msa1123350 AT1G06430.2 40.408 245 145 1 188 432 218 461 5.51e-55 194
Msa1123350 AT3G47060.1 44.355 248 130 4 188 430 323 567 5.37e-54 193
Msa1123350 AT5G58870.1 44.355 248 130 4 188 430 327 571 5.78e-54 193
Msa1123350 AT2G29080.1 44.309 246 134 2 189 432 321 565 1.50e-52 189
Msa1123350 AT5G15250.2 39.925 268 137 2 188 432 222 488 7.70e-52 182
Msa1123350 AT1G50250.1 39.592 245 147 1 188 432 260 503 1.67e-51 185
Msa1123350 AT4G23940.1 39.442 251 143 2 189 431 429 678 3.56e-51 186
Msa1123350 AT5G42270.1 38.776 245 149 1 188 432 248 491 2.72e-50 181
Msa1123350 AT3G15120.2 39.914 233 131 3 186 412 725 954 9.33e-50 182
Msa1123350 AT3G15120.1 39.914 233 131 3 186 412 715 944 9.96e-50 182
Msa1123350 AT1G05910.1 40.726 248 138 3 188 429 379 623 4.48e-49 180
Msa1123350 AT2G03670.1 38.400 250 151 2 185 431 281 530 4.91e-48 174
Msa1123350 AT2G03670.1 32.661 248 160 3 190 431 22 268 3.14e-35 138
Msa1123350 AT2G26140.1 40.408 245 142 2 189 433 226 466 1.04e-47 174
Msa1123350 AT3G56690.1 40.435 230 136 1 185 414 719 947 2.31e-47 175
Msa1123350 AT3G56690.1 41.837 196 110 2 219 413 413 605 7.36e-42 159
Msa1123350 AT3G16290.1 39.749 239 143 1 189 427 409 646 1.38e-46 172
Msa1123350 AT5G53170.1 37.200 250 148 3 186 433 358 600 3.27e-45 168
Msa1123350 AT3G02450.1 40.377 265 150 4 183 443 327 587 5.14e-45 166
Msa1123350 AT2G45500.4 35.743 249 149 6 170 414 63 304 1.42e-43 156
Msa1123350 AT2G45500.3 35.743 249 149 6 170 414 63 304 1.42e-43 156
Msa1123350 AT2G45500.1 35.178 253 153 6 166 414 196 441 2.28e-42 156
Msa1123350 AT2G45500.2 35.178 253 153 6 166 414 192 437 2.72e-42 156
Msa1123350 AT2G45500.5 35.178 253 153 6 166 414 202 447 3.64e-42 156
Msa1123350 AT1G03000.1 37.743 257 153 6 177 429 645 898 3.93e-42 159
Msa1123350 AT1G80350.1 36.154 260 152 5 181 431 230 484 1.20e-41 155
Msa1123350 AT1G02890.1 38.528 231 133 5 188 414 942 1167 1.64e-41 158
Msa1123350 AT4G02480.1 38.528 231 133 5 188 414 961 1186 1.85e-41 158
Msa1123350 AT5G08470.1 37.168 226 139 1 189 414 843 1065 2.12e-40 155
Msa1123350 AT4G28000.3 37.826 230 134 6 188 414 518 741 2.28e-40 154
Msa1123350 AT4G28000.2 37.826 230 134 6 188 414 518 741 2.49e-40 154
Msa1123350 AT5G08470.3 37.168 226 139 1 189 414 834 1056 2.55e-40 154
Msa1123350 AT4G28000.1 37.826 230 134 6 188 414 516 739 2.60e-40 154
Msa1123350 AT5G53540.1 37.391 230 134 5 189 414 86 309 1.10e-39 147
Msa1123350 AT2G34560.1 36.726 226 139 3 189 413 102 324 3.61e-39 145
Msa1123350 AT2G34560.2 36.726 226 139 3 189 413 111 333 5.07e-39 145
Msa1123350 AT3G01610.1 35.366 246 144 3 179 413 222 463 1.94e-38 149
Msa1123350 AT3G01610.1 36.123 227 140 3 189 414 527 749 3.07e-33 133
Msa1123350 AT3G01610.2 35.366 246 144 3 179 413 222 463 1.94e-38 149
Msa1123350 AT3G01610.2 36.123 227 140 3 189 414 527 749 3.19e-33 133
Msa1123350 AT1G64110.1 35.652 230 140 5 188 414 514 738 2.17e-38 148
Msa1123350 AT1G64110.2 35.652 230 140 5 188 414 519 743 2.17e-38 148
Msa1123350 AT1G64110.4 35.652 230 140 5 188 414 519 743 2.17e-38 148
Msa1123350 AT1G64110.5 35.652 230 140 5 188 414 517 741 2.18e-38 148
Msa1123350 AT1G64110.3 35.652 230 140 5 188 414 517 741 2.18e-38 148
Msa1123350 AT5G52882.1 36.957 230 136 6 188 414 515 738 4.74e-38 147
Msa1123350 AT5G64580.1 37.872 235 135 6 188 414 314 545 5.93e-38 147
Msa1123350 AT4G27680.1 36.797 231 134 6 189 414 83 306 4.60e-37 140
Msa1123350 AT2G27600.1 35.055 271 146 11 181 445 123 369 5.05e-37 140
Msa1123350 AT1G50140.2 37.500 232 132 6 189 414 691 915 5.25e-37 144
Msa1123350 AT1G50140.5 37.500 232 132 6 189 414 691 915 5.25e-37 144
Msa1123350 AT1G50140.3 37.500 232 132 6 189 414 713 937 6.29e-37 144
Msa1123350 AT1G50140.1 37.500 232 132 6 189 414 713 937 6.29e-37 144
Msa1123350 AT1G50140.4 37.500 232 132 6 189 414 713 937 6.29e-37 144
Msa1123350 AT2G03670.2 32.661 248 160 3 190 431 22 268 3.52e-36 138
Msa1123350 AT2G03670.2 38.732 142 86 1 185 325 281 422 1.63e-22 99.8
Msa1123350 AT4G24860.3 35.498 231 140 5 188 414 816 1041 8.04e-36 141
Msa1123350 AT4G24860.1 35.498 231 140 5 188 414 818 1043 8.83e-36 141
Msa1123350 AT4G24860.4 35.498 231 140 5 188 414 791 1016 9.06e-36 141
Msa1123350 AT4G24860.2 35.498 231 140 5 188 414 814 1039 1.08e-35 140
Msa1123350 AT3G19740.1 35.115 262 146 7 189 431 703 959 1.69e-35 140
Msa1123350 AT3G27120.1 35.510 245 144 8 176 414 389 625 6.28e-34 135
Msa1123350 AT1G79560.2 32.245 245 152 3 195 430 497 736 6.00e-32 129
Msa1123350 AT1G79560.3 32.245 245 152 3 195 430 497 736 6.24e-32 129
Msa1123350 AT1G79560.1 32.245 245 152 3 195 430 497 736 6.40e-32 129
Msa1123350 AT4G04180.1 35.371 229 131 6 188 407 317 537 1.05e-31 128
Msa1123350 AT4G04180.2 35.371 229 131 6 188 407 312 532 1.10e-31 128
Msa1123350 AT4G04910.1 33.094 278 157 8 177 427 203 478 4.23e-31 127
Msa1123350 AT1G62130.2 32.589 224 132 6 188 408 744 951 5.69e-28 117
Msa1123350 AT1G62130.1 32.589 224 132 6 188 408 751 958 6.20e-28 117
Msa1123350 AT1G02890.2 33.766 231 116 6 188 414 942 1139 1.97e-26 113
Msa1123350 AT3G04340.1 33.690 187 119 3 185 370 782 964 7.88e-23 102
Msa1123350 AT5G08470.2 35.135 148 93 1 189 336 843 987 7.76e-20 93.2
Msa1123350 AT2G18193.1 35.185 162 92 6 200 356 219 372 5.16e-13 71.2
Msa1123350 AT4G36580.1 34.694 147 74 6 223 361 381 513 4.72e-12 68.6
Msa1123350 AT2G18330.1 30.939 181 103 6 185 361 354 516 9.18e-12 67.8
Msa1123350 AT2G18190.1 33.333 165 94 5 200 356 220 376 2.17e-11 66.2
Msa1123350 AT3G28580.1 29.586 169 86 4 214 357 230 390 9.12e-11 64.3
Msa1123350 AT5G17760.1 34.437 151 83 5 214 356 243 385 9.87e-11 64.3

Find 138 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTTAATTTCCTGTATC+TGG 0.101599 7_3:-74234396 None:intergenic
CTCTTCAGTATTGTGAATTA+TGG 0.192739 7_3:+74237885 Msa1123350:three_prime_UTR
CTTTGCAAGAAGTGTCTTTC+CGG 0.232867 7_3:-74234509 None:intergenic
TGTCGTTGCCGTCTGGTTTC+CGG 0.236164 7_3:-74232829 None:intergenic
CCATACCTTGTCGAGGATTA+TGG 0.247627 7_3:-74237961 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.248853 7_3:-74235418 None:intergenic
GAGAGAGAGGGTTATATTAT+AGG 0.266803 7_3:-74232707 None:intergenic
AATCAAGGACTATTTGTTAA+TGG 0.271847 7_3:+74232997 Msa1123350:CDS
CTGCCTCCTTTGTTTCATTT+CGG 0.273091 7_3:+74237830 Msa1123350:three_prime_UTR
CAAACTTCGGTTACTGAAAC+TGG 0.308708 7_3:+74232970 Msa1123350:CDS
ACCAGACGGCAACGACAAAA+AGG 0.312803 7_3:+74232835 Msa1123350:CDS
TACCAGGTTCTTTCTGTTGT+TGG 0.324071 7_3:+74234280 Msa1123350:intron
ATCTATACCTATTTATTCCT+TGG 0.327359 7_3:+74238080 Msa1123350:three_prime_UTR
AGAAGTGTCTTTCCGGTTCC+AGG 0.334762 7_3:-74234502 None:intergenic
GTTAAAGAAAACTATAATTC+AGG 0.354276 7_3:-74237917 None:intergenic
GAAGGTTGAGAAGGCTCCTT+TGG 0.355174 7_3:+74234342 Msa1123350:CDS
CCTGAACTGTATGAAGATAT+TGG 0.355232 7_3:+74234442 Msa1123350:CDS
TACTAGCCCAAGGAATAAAT+AGG 0.361490 7_3:-74238087 None:intergenic
TTCTTTAATTTCCTGTATCT+GGG 0.365835 7_3:-74234395 None:intergenic
ATAGGACGATGTGTTGGAAT+TGG 0.370805 7_3:-74232689 None:intergenic
CCATATAAAATGACTCCCTT+TGG 0.372985 7_3:-74234475 None:intergenic
AGAAGAGTTTGTAGCGAATC+AGG 0.373755 7_3:+74233021 Msa1123350:CDS
CACCAGGAGGCGGTTTGAAC+CGG 0.381250 7_3:+74232795 Msa1123350:CDS
GTTATGTTTAAGAAGAAAGA+AGG 0.390674 7_3:+74237762 Msa1123350:CDS
TATTTATTCCTTGGGCTAGT+AGG 0.391524 7_3:+74238089 Msa1123350:three_prime_UTR
CTGGTGTTCCTTGACCCATA+TGG 0.391979 7_3:-74232778 None:intergenic
TAGAATCAAAACCATCTAAC+TGG 0.394542 7_3:-74235725 None:intergenic
CCATGCTATTGTTTCAAGTT+CGG 0.398918 7_3:+74233153 Msa1123350:CDS
TCAAGATTGCCAACACTCAT+AGG 0.399371 7_3:-74233112 None:intergenic
GTTTCCGGTCACCCGGTTGC+CGG 0.402127 7_3:-74232814 None:intergenic
AGCTGAAGAAGATAGATCTA+AGG 0.403467 7_3:+74233069 Msa1123350:CDS
AGAAGAATTTGTCATGACTA+AGG 0.410103 7_3:+74236023 Msa1123350:CDS
CCAATATCTTCATACAGTTC+AGG 0.412254 7_3:-74234442 None:intergenic
TCTATACCTATTTATTCCTT+GGG 0.416949 7_3:+74238081 Msa1123350:three_prime_UTR
AAGGAATAAATAGGTATAGA+TGG 0.426273 7_3:-74238078 None:intergenic
ATCAAGGCTTTCAATTCTGT+TGG 0.426673 7_3:-74235775 None:intergenic
AGGCGGTTTGAACCGGCAAC+CGG 0.426732 7_3:+74232802 Msa1123350:CDS
AAATTTAGATACATACATCT+AGG 0.429419 7_3:+74235974 Msa1123350:intron
GCAACATTCTTGCGTGTTGT+TGG 0.429964 7_3:+74235361 Msa1123350:CDS
TGGTTTAGATGCCCAGATAC+AGG 0.432553 7_3:+74234384 Msa1123350:CDS
CGAAGTTTGCACTTCGATAA+CGG 0.436584 7_3:-74232956 None:intergenic
TCGCAAACAGCGAAAACAAA+AGG 0.439274 7_3:+74232898 Msa1123350:CDS
AAGAGTGAAGTGAGAGAGAG+AGG 0.442775 7_3:-74232720 None:intergenic
CCGTCTGGTTTCCGGTCACC+CGG 0.444415 7_3:-74232821 None:intergenic
TGTTTGCGACCGACGCGAGC+CGG 0.446908 7_3:-74232884 None:intergenic
GAGTTGCTGAACCAGTTAGA+TGG 0.449762 7_3:+74235714 Msa1123350:CDS
CTTCACATATACAATCCTTC+AGG 0.456387 7_3:-74237789 None:intergenic
CCATAATCCTCGACAAGGTA+TGG 0.457171 7_3:+74237961 Msa1123350:three_prime_UTR
TATAAAATGACTCCCTTTGG+AGG 0.457417 7_3:-74234472 None:intergenic
TGCCGGTTCAAACCGCCTCC+TGG 0.458290 7_3:-74232797 None:intergenic
CATACAGTTCAGGATGTGTA+AGG 0.459525 7_3:-74234432 None:intergenic
TTCATCAATAAAGACAATAG+AGG 0.461693 7_3:-74235464 None:intergenic
GTTGGACCGGAGTATTATGT+TGG 0.467154 7_3:+74233175 Msa1123350:CDS
ATGACTAAGGATGAGTTCTC+TGG 0.469513 7_3:+74236036 Msa1123350:CDS
AGTAACTTCTAACCTTCATT+CGG 0.472587 7_3:-74236113 None:intergenic
TTATGTTTAAGAAGAAAGAA+GGG 0.473265 7_3:+74237763 Msa1123350:CDS
TTATATGGAGAACCTGGAAC+CGG 0.475592 7_3:+74234490 Msa1123350:CDS
TGTTTCAAGTTCGGTTGGAC+CGG 0.476783 7_3:+74233162 Msa1123350:CDS
TTTACGAGAACGCCGAATGA+AGG 0.481823 7_3:+74236101 Msa1123350:CDS
TGAACCGGCAACCGGGTGAC+CGG 0.482682 7_3:+74232810 Msa1123350:CDS
ATTCGAACCGGCGGCACCAC+CGG 0.482797 7_3:+74232865 Msa1123350:CDS
CGACCTGGTCTTAGCAGAGC+TGG 0.483758 7_3:-74235798 None:intergenic
TTGGACCGGAGTATTATGTT+GGG 0.486241 7_3:+74233176 Msa1123350:CDS
ACTGAAACTGGAACGAATCA+AGG 0.486524 7_3:+74232982 Msa1123350:CDS
CTTTGTTGATAAGGATCAGT+TGG 0.488476 7_3:+74233207 Msa1123350:CDS
CGAAATGAAACAAAGGAGGC+AGG 0.490517 7_3:-74237829 None:intergenic
CGCAAACAGCGAAAACAAAA+GGG 0.492686 7_3:+74232899 Msa1123350:CDS
ACGCGAGCCGGTGGTGCCGC+CGG 0.493710 7_3:-74232872 None:intergenic
AAAGCAATATGTACCGAAGC+TGG 0.494002 7_3:+74236069 Msa1123350:CDS
TCAGGAAAGGTTGAAGCCTC+AGG 0.495323 7_3:+74233039 Msa1123350:CDS
TAAGACCAGGTCGAATAGAC+AGG 0.501709 7_3:+74235808 Msa1123350:CDS
GGCTGCGTCGCGGTTGCCGA+CGG 0.504570 7_3:+74232928 Msa1123350:CDS
CGGCAACCGCGACGCAGCCT+CGG 0.510404 7_3:-74232924 None:intergenic
GCTATTGTTTCAAGTTCGGT+TGG 0.512463 7_3:+74233157 Msa1123350:CDS
ACCTTCATTACAGAGACCAT+TGG 0.516269 7_3:-74234325 None:intergenic
TAAAGCAAGTAAGCCAGCTT+CGG 0.519256 7_3:-74236082 None:intergenic
TTATTCCTTGGGCTAGTAGG+AGG 0.524768 7_3:+74238092 Msa1123350:three_prime_UTR
GTCTTAGCAGAGCTGGATCA+AGG 0.525057 7_3:-74235791 None:intergenic
TCTTCAGCTTTCTCCTCCTG+AGG 0.525355 7_3:-74233055 None:intergenic
CTCTGTAATGAAGGTTGAGA+AGG 0.525660 7_3:+74234333 Msa1123350:CDS
CTCTCCCTGATATCAAAACT+AGG 0.526151 7_3:+74235844 Msa1123350:CDS
CGTGGTTCGCCTATGAGTGT+TGG 0.527223 7_3:+74233103 Msa1123350:CDS
TGCCTTCTTAAAATCAGCAT+GGG 0.528839 7_3:-74237730 None:intergenic
TCAAGATGAAGTTGATCCAA+TGG 0.539698 7_3:+74234309 Msa1123350:CDS
TTGCCTTCTTAAAATCAGCA+TGG 0.546147 7_3:-74237731 None:intergenic
TCTAAGGTTGATGATCTTCG+TGG 0.546817 7_3:+74233085 Msa1123350:CDS
AGAGTGAAGTGAGAGAGAGA+GGG 0.548989 7_3:-74232719 None:intergenic
AAAGGACAAGAAATTCGAAC+CGG 0.554284 7_3:+74232853 Msa1123350:CDS
ATTGATGAAATTGACGCTGT+TGG 0.554458 7_3:+74235478 Msa1123350:CDS
TATATTATAGGACGATGTGT+TGG 0.555217 7_3:-74232695 None:intergenic
GAATCATATGCTGACATTGG+TGG 0.555368 7_3:+74234364 Msa1123350:CDS
GGCGGTTTGAACCGGCAACC+GGG 0.577140 7_3:+74232803 Msa1123350:CDS
TCCAATGGTCTCTGTAATGA+AGG 0.577840 7_3:+74234324 Msa1123350:CDS
GAATGTTGCTGATGTTGAGT+TGG 0.578313 7_3:-74235347 None:intergenic
ATTGGTATCAAGCCTCCAAA+GGG 0.581334 7_3:+74234460 Msa1123350:CDS
TATTGGTATCAAGCCTCCAA+AGG 0.581644 7_3:+74234459 Msa1123350:CDS
CATATGGGTCAAGGAACACC+AGG 0.582913 7_3:+74232779 Msa1123350:exon
TCATCAATAAAGACAATAGA+GGG 0.582931 7_3:-74235463 None:intergenic
GCGGCACCACCGGCTCGCGT+CGG 0.584475 7_3:+74232875 Msa1123350:CDS
GAAATGAAACAAAGGAGGCA+GGG 0.585580 7_3:-74237828 None:intergenic
GATAAGGATCAGTTGGAACC+TGG 0.586516 7_3:+74233214 Msa1123350:CDS
AAAGGAGGCAGGGGTAAATG+AGG 0.586817 7_3:-74237818 None:intergenic
TATGTTTAAGAAGAAAGAAG+GGG 0.587164 7_3:+74237764 Msa1123350:CDS
GTGGAGAGCGTGAAATTCAA+AGG 0.587676 7_3:+74235682 Msa1123350:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.588030 7_3:+74235411 Msa1123350:CDS
TACAGTTCAGGATGTGTAAG+GGG 0.589268 7_3:-74234430 None:intergenic
AAAACACCGAAATGAAACAA+AGG 0.594716 7_3:-74237836 None:intergenic
TGCATCAAAATAGCGCAACC+AGG 0.595025 7_3:-74233232 None:intergenic
ATACAGTTCAGGATGTGTAA+GGG 0.600073 7_3:-74234431 None:intergenic
TGCAGGTATGATGCTCACTC+AGG 0.601841 7_3:+74235660 Msa1123350:intron
CGGAAAGACACTTCTTGCAA+AGG 0.603905 7_3:+74234510 Msa1123350:CDS
CGTTATCGAAGTGCAAACTT+CGG 0.605718 7_3:+74232957 Msa1123350:CDS
AAATGAAACAAAGGAGGCAG+GGG 0.606531 7_3:-74237827 None:intergenic
TGAAATTCAAAGGACCATGT+TGG 0.608156 7_3:+74235692 Msa1123350:CDS
GGTCAAGGAACACCAGGAGG+CGG 0.609421 7_3:+74232785 Msa1123350:CDS
AAGAAAGAAGGGGTGCCTGA+AGG 0.613773 7_3:+74237774 Msa1123350:CDS
AGTTTGTAGCGAATCAGGAA+AGG 0.618718 7_3:+74233026 Msa1123350:CDS
TTGGAATCATATGCTGACAT+TGG 0.619347 7_3:+74234361 Msa1123350:CDS
TTGCGACCGACGCGAGCCGG+TGG 0.620039 7_3:-74232881 None:intergenic
CTGGTTCAGCAACTCCAACA+TGG 0.624925 7_3:-74235706 None:intergenic
CCGGGTGACCGGAAACCAGA+CGG 0.626668 7_3:+74232821 Msa1123350:CDS
GATCCAGCTCTGCTAAGACC+AGG 0.627123 7_3:+74235795 Msa1123350:CDS
CAACTGATCCTTATCAACAA+AGG 0.630631 7_3:-74233206 None:intergenic
GAGATGGTCCAAAACTTGTG+AGG 0.639633 7_3:+74235410 Msa1123350:CDS
TTGACGCTGTTGGTACAAAG+AGG 0.641384 7_3:+74235488 Msa1123350:CDS
ATGTCAGCATATGATTCCAA+AGG 0.644573 7_3:-74234358 None:intergenic
GGAAAGGTTGAAGCCTCAGG+AGG 0.645072 7_3:+74233042 Msa1123350:CDS
AAAATCCCAACATAATACTC+CGG 0.653134 7_3:-74233181 None:intergenic
GCGAAAACAAAAGGGTTCCG+AGG 0.654416 7_3:+74232907 Msa1123350:CDS
TTCGATAACGGAGTTACCGT+CGG 0.658917 7_3:-74232944 None:intergenic
AGGTATGATGCTCACTCAGG+TGG 0.668411 7_3:+74235663 Msa1123350:intron
CCGAACTTGAAACAATAGCA+TGG 0.672829 7_3:-74233153 None:intergenic
AGGGTTCCGAGGCTGCGTCG+CGG 0.672989 7_3:+74232918 Msa1123350:CDS
ACACCGAAATGAAACAAAGG+AGG 0.675852 7_3:-74237833 None:intergenic
GGACAAGAAATTCGAACCGG+CGG 0.676843 7_3:+74232856 Msa1123350:CDS
ATACACCTCCTACTAGCCCA+AGG 0.677079 7_3:-74238097 None:intergenic
CAAAACACCATACCTTGTCG+AGG 0.679820 7_3:-74237968 None:intergenic
ATGGGTCAAGGAACACCAGG+AGG 0.699908 7_3:+74232782 Msa1123350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATAAAAACTTTTG+AGG - chr7_3:74233476-74233495 None:intergenic 10.0%
!!! CAAAAGTTTTTATAAAATTT+TGG + chr7_3:74233476-74233495 Msa1123350:intron 10.0%
!! ACAAAAAAAAAAAAAATCAA+TGG - chr7_3:74237249-74237268 None:intergenic 10.0%
!! AAAAAACAAAAAAACCATAT+GGG + chr7_3:74232764-74232783 Msa1123350:exon 15.0%
!! TGTATTAAGTATCAATAAAA+TGG + chr7_3:74233872-74233891 Msa1123350:intron 15.0%
!!! ATTATTAAGAAAAAAGTACA+CGG - chr7_3:74233950-74233969 None:intergenic 15.0%
!! AGCTTAAAGATATTAATATT+TGG + chr7_3:74234036-74234055 Msa1123350:intron 15.0%
!! TATATAATTTATATGATGCT+TGG + chr7_3:74234252-74234271 Msa1123350:intron 15.0%
!! CAATTATATGCATTAATTAA+CGG + chr7_3:74235217-74235236 Msa1123350:intron 15.0%
!!! ATATCTTAATTGTACTATTT+TGG + chr7_3:74236139-74236158 Msa1123350:intron 15.0%
!! TAACTGAATATATGAATTTA+GGG - chr7_3:74236293-74236312 None:intergenic 15.0%
!! TTAACTGAATATATGAATTT+AGG - chr7_3:74236294-74236313 None:intergenic 15.0%
!! AAAAAAAAATATTAGAATGG+TGG + chr7_3:74237471-74237490 Msa1123350:intron 15.0%
!! GAAAAAACAAAAAAACCATA+TGG + chr7_3:74232763-74232782 Msa1123350:exon 20.0%
!! TTAAGTATCAATAAAATGGT+TGG + chr7_3:74233876-74233895 Msa1123350:intron 20.0%
!! TCTATGATAATTCATACAAA+TGG + chr7_3:74234677-74234696 Msa1123350:intron 20.0%
!! TAACTAAAACTCAATAAGAT+TGG + chr7_3:74234700-74234719 Msa1123350:intron 20.0%
!! TGAAAAATATTATCCAATCT+TGG + chr7_3:74234749-74234768 Msa1123350:intron 20.0%
!! GAAAAATATTATCCAATCTT+GGG + chr7_3:74234750-74234769 Msa1123350:intron 20.0%
!! AATAAAACTATAAAGAGAAG+AGG - chr7_3:74234784-74234803 None:intergenic 20.0%
!!! GAATTGATTCAAAAATACTT+AGG + chr7_3:74235388-74235407 Msa1123350:CDS 20.0%
!! AAATTTAGATACATACATCT+AGG + chr7_3:74235974-74235993 Msa1123350:intron 20.0%
!!! ATAGTACAATTTAGATGTTT+TGG - chr7_3:74236165-74236184 None:intergenic 20.0%
!!! ACATCTAAATTGTACTATTT+TGG + chr7_3:74236167-74236186 Msa1123350:intron 20.0%
!! GAATAACAAAATTATAGCAT+AGG + chr7_3:74236314-74236333 Msa1123350:intron 20.0%
!!! TTAAAGGTGTAAATTGAAAA+AGG - chr7_3:74236374-74236393 None:intergenic 20.0%
!! GTGAAATAAACCAAAAAAAT+GGG - chr7_3:74236728-74236747 None:intergenic 20.0%
!! ATAAAACAAAACAAAAGAGT+GGG - chr7_3:74237043-74237062 None:intergenic 20.0%
!! AATAAAACAAAACAAAAGAG+TGG - chr7_3:74237044-74237063 None:intergenic 20.0%
!! AATATAAATGTCAGAAAACA+CGG - chr7_3:74237127-74237146 None:intergenic 20.0%
!! ATATAAATGTAAAAATACCC+AGG - chr7_3:74237179-74237198 None:intergenic 20.0%
!! TAACAGTATAATTAACAGTA+TGG - chr7_3:74237298-74237317 None:intergenic 20.0%
!! CTGTTAATTATACTGTTAAT+TGG + chr7_3:74237300-74237319 Msa1123350:intron 20.0%
!! TTATGTTTAAGAAGAAAGAA+GGG + chr7_3:74237763-74237782 Msa1123350:CDS 20.0%
!! GTTAAAGAAAACTATAATTC+AGG - chr7_3:74237920-74237939 None:intergenic 20.0%
!! TTTCTTTAACTCCAAAAAAT+TGG + chr7_3:74237930-74237949 Msa1123350:three_prime_UTR 20.0%
!!! TGGAAAATTTTCCAATTTTT+TGG - chr7_3:74237944-74237963 None:intergenic 20.0%
!!! CGTTTTTTTTTGTTTTGTTT+TGG + chr7_3:74238180-74238199 Msa1123350:three_prime_UTR 20.0%
!! AATCAAGGACTATTTGTTAA+TGG + chr7_3:74232997-74233016 Msa1123350:CDS 25.0%
! ATGGTGATTATTTGATTCTT+AGG + chr7_3:74233294-74233313 Msa1123350:intron 25.0%
! TGGTGATTATTTGATTCTTA+GGG + chr7_3:74233295-74233314 Msa1123350:intron 25.0%
!!! AGGGTTTTGTTTGAATATAT+TGG + chr7_3:74233314-74233333 Msa1123350:intron 25.0%
!!! GAATTTTTAGGTTTAGGTTT+AGG + chr7_3:74233348-74233367 Msa1123350:intron 25.0%
! TAAGTGAGAAAACATATAGT+TGG + chr7_3:74233388-74233407 Msa1123350:intron 25.0%
!!! TTTGGTTTTGGTTGTTTTTA+GGG + chr7_3:74233438-74233457 Msa1123350:intron 25.0%
!! CTCAAGTATAAACTATTTTG+AGG - chr7_3:74233695-74233714 None:intergenic 25.0%
! TCTTAATAATACTCTTGTTC+AGG + chr7_3:74233960-74233979 Msa1123350:intron 25.0%
! AACATAATCAACATGTAAAG+TGG + chr7_3:74233985-74234004 Msa1123350:intron 25.0%
! ACATAATCAACATGTAAAGT+GGG + chr7_3:74233986-74234005 Msa1123350:intron 25.0%
! ATTAATATTTGGCTGTTATG+TGG + chr7_3:74234047-74234066 Msa1123350:intron 25.0%
! TGAACATATCTTAATTGACA+TGG + chr7_3:74234152-74234171 Msa1123350:intron 25.0%
!! TTCTTTAATTTCCTGTATCT+GGG - chr7_3:74234398-74234417 None:intergenic 25.0%
! AGAATTTATGAGTAGTAACA+TGG - chr7_3:74234998-74235017 None:intergenic 25.0%
! ATATTTCTCAAAAAGTCTTC+CGG - chr7_3:74235061-74235080 None:intergenic 25.0%
! ATTCAAAAATACTTAGGAGA+TGG + chr7_3:74235394-74235413 Msa1123350:CDS 25.0%
! TCATCAATAAAGACAATAGA+GGG - chr7_3:74235466-74235485 None:intergenic 25.0%
! TTCATCAATAAAGACAATAG+AGG - chr7_3:74235467-74235486 None:intergenic 25.0%
! CAAAATTATAGCATAGGTTA+TGG + chr7_3:74236320-74236339 Msa1123350:intron 25.0%
! TCTCATTACCTCAAATTATT+TGG - chr7_3:74236432-74236451 None:intergenic 25.0%
!! ATAATTTGAGGTAATGAGAT+TGG + chr7_3:74236433-74236452 Msa1123350:intron 25.0%
!! TAATTTGAGGTAATGAGATT+GGG + chr7_3:74236434-74236453 Msa1123350:intron 25.0%
!!! TCTCTCAAAATTTTAAGTGA+TGG - chr7_3:74236484-74236503 None:intergenic 25.0%
!!! CACTTAAAATTTTGAGAGAA+AGG + chr7_3:74236485-74236504 Msa1123350:intron 25.0%
! CGTGAAATAAACCAAAAAAA+TGG - chr7_3:74236729-74236748 None:intergenic 25.0%
! ATATAAATGTCAGAAAACAC+GGG - chr7_3:74237126-74237145 None:intergenic 25.0%
! TGCTAAATCAAGTGAATTAA+GGG - chr7_3:74237376-74237395 None:intergenic 25.0%
!!! TTCTTGGTATGTTTTTAAAC+TGG + chr7_3:74237503-74237522 Msa1123350:intron 25.0%
!!! AGTAGTTTATCTTGTTTTTC+AGG + chr7_3:74237704-74237723 Msa1123350:intron 25.0%
! GTTATGTTTAAGAAGAAAGA+AGG + chr7_3:74237762-74237781 Msa1123350:CDS 25.0%
! TATGTTTAAGAAGAAAGAAG+GGG + chr7_3:74237764-74237783 Msa1123350:CDS 25.0%
! GGTGTTAAAATGAAGAAAAA+CGG + chr7_3:74238046-74238065 Msa1123350:three_prime_UTR 25.0%
! AAAATGAAGAAAAACGGTAA+CGG + chr7_3:74238052-74238071 Msa1123350:three_prime_UTR 25.0%
! AAGGAATAAATAGGTATAGA+TGG - chr7_3:74238081-74238100 None:intergenic 25.0%
! ATCTATACCTATTTATTCCT+TGG + chr7_3:74238080-74238099 Msa1123350:three_prime_UTR 25.0%
! TCTATACCTATTTATTCCTT+GGG + chr7_3:74238081-74238100 Msa1123350:three_prime_UTR 25.0%
! TGTATGCAAAAAAATTATCG+AGG + chr7_3:74238115-74238134 Msa1123350:three_prime_UTR 25.0%
TATATTATAGGACGATGTGT+TGG - chr7_3:74232698-74232717 None:intergenic 30.0%
AAAATCCCAACATAATACTC+CGG - chr7_3:74233184-74233203 None:intergenic 30.0%
! GATTTTGTCCTTTGTTGATA+AGG + chr7_3:74233198-74233217 Msa1123350:CDS 30.0%
!! ATTTTGATGCATAACAAGGT+AGG + chr7_3:74233244-74233263 Msa1123350:intron 30.0%
! TTTTGATGCATAACAAGGTA+GGG + chr7_3:74233245-74233264 Msa1123350:intron 30.0%
CCATAACAATCAAGAGAAAA+AGG - chr7_3:74233278-74233297 None:intergenic 30.0%
! CCTTTTTCTCTTGATTGTTA+TGG + chr7_3:74233275-74233294 Msa1123350:intron 30.0%
! GAAGATTGCGATGAATTTTT+AGG + chr7_3:74233336-74233355 Msa1123350:intron 30.0%
!!! TGCGATGAATTTTTAGGTTT+AGG + chr7_3:74233342-74233361 Msa1123350:intron 30.0%
TGAGAAAACATATAGTTGGA+AGG + chr7_3:74233392-74233411 Msa1123350:intron 30.0%
! ATATAGTTGGAAGGTTGATT+GGG + chr7_3:74233401-74233420 Msa1123350:intron 30.0%
!!! GTTTGGTTTTGGTTGTTTTT+AGG + chr7_3:74233437-74233456 Msa1123350:intron 30.0%
! TATAAAATTTTGGGCCTGTT+TGG + chr7_3:74233486-74233505 Msa1123350:intron 30.0%
AGTATCAATAAAATGGTTGG+CGG + chr7_3:74233879-74233898 Msa1123350:intron 30.0%
! GACATAGATGAGAGAATTTT+GGG + chr7_3:74234008-74234027 Msa1123350:intron 30.0%
TTTGTGTTCTATCTTCACTT+GGG + chr7_3:74234077-74234096 Msa1123350:intron 30.0%
! GGGATTTTCTATTGCATTTA+TGG + chr7_3:74234097-74234116 Msa1123350:intron 30.0%
GGAATCATACTAAATATGAG+GGG - chr7_3:74234183-74234202 None:intergenic 30.0%
CGGAATCATACTAAATATGA+GGG - chr7_3:74234184-74234203 None:intergenic 30.0%
ACGGAATCATACTAAATATG+AGG - chr7_3:74234185-74234204 None:intergenic 30.0%
ATGATTCCGTGACTTTATTA+TGG + chr7_3:74234195-74234214 Msa1123350:intron 30.0%
TTCACACCATAATAAAGTCA+CGG - chr7_3:74234204-74234223 None:intergenic 30.0%
! CTTCTTTAATTTCCTGTATC+TGG - chr7_3:74234399-74234418 None:intergenic 30.0%
!!! TTTTCATCCTGTTTTGAAGT+GGG - chr7_3:74234735-74234754 None:intergenic 30.0%
!!! TTTTTCATCCTGTTTTGAAG+TGG - chr7_3:74234736-74234755 None:intergenic 30.0%
TTATCCAATCTTGGGTTAAA+TGG + chr7_3:74234758-74234777 Msa1123350:intron 30.0%
!! TTGAATGTGGCATTTTGTTT+TGG + chr7_3:74235563-74235582 Msa1123350:intron 30.0%
!!! TGAATGTGGCATTTTGTTTT+GGG + chr7_3:74235564-74235583 Msa1123350:intron 30.0%
TAGAATCAAAACCATCTAAC+TGG - chr7_3:74235728-74235747 None:intergenic 30.0%
!!! TTAGATGGTTTTGATTCTAG+AGG + chr7_3:74235729-74235748 Msa1123350:CDS 30.0%
AGAAGAATTTGTCATGACTA+AGG + chr7_3:74236023-74236042 Msa1123350:CDS 30.0%
AGTAACTTCTAACCTTCATT+CGG - chr7_3:74236116-74236135 None:intergenic 30.0%
ATGTGGAAGGAAATATTTGT+TGG + chr7_3:74236204-74236223 Msa1123350:intron 30.0%
ATTATAGCATAGGTTATGGT+CGG + chr7_3:74236324-74236343 Msa1123350:intron 30.0%
AGGTGTAAATTGAAAAAGGT+TGG - chr7_3:74236370-74236389 None:intergenic 30.0%
!!! TTTCCTGCGACTTTTTTTAA+AGG - chr7_3:74236390-74236409 None:intergenic 30.0%
TAGAGATGCCAAATAATTTG+AGG + chr7_3:74236421-74236440 Msa1123350:intron 30.0%
! CTCCTGAAAAGATCAATTTT+GGG + chr7_3:74236529-74236548 Msa1123350:intron 30.0%
! TCCTGAAAAGATCAATTTTG+GGG + chr7_3:74236530-74236549 Msa1123350:intron 30.0%
AACATACAGTGTTCTAACAA+GGG - chr7_3:74236797-74236816 None:intergenic 30.0%
AAACATACAGTGTTCTAACA+AGG - chr7_3:74236798-74236817 None:intergenic 30.0%
TTTGTGAGCAAGAGAAAAAA+GGG - chr7_3:74236932-74236951 None:intergenic 30.0%
ATTTGTGAGCAAGAGAAAAA+AGG - chr7_3:74236933-74236952 None:intergenic 30.0%
ACAGATCATAAGTAGATGAA+AGG - chr7_3:74237018-74237037 None:intergenic 30.0%
TGTTATTGACCTGTTTGTTT+AGG + chr7_3:74237266-74237285 Msa1123350:intron 30.0%
GCTAAATCAAGTGAATTAAG+GGG - chr7_3:74237375-74237394 None:intergenic 30.0%
CTGCTAAATCAAGTGAATTA+AGG - chr7_3:74237377-74237396 None:intergenic 30.0%
TTAGCAGAGTGGAAAAAAAA+TGG + chr7_3:74237390-74237409 Msa1123350:intron 30.0%
!! TTGGTATGTTTTTAAACTGG+CGG + chr7_3:74237506-74237525 Msa1123350:intron 30.0%
GATCTTGCTTTGCATTTAAT+TGG + chr7_3:74237582-74237601 Msa1123350:intron 30.0%
! ATTGTCTTCTGCTAGTTTAT+TGG + chr7_3:74237609-74237628 Msa1123350:intron 30.0%
!!! CTTGTACCTTGTATTTTTTG+AGG + chr7_3:74237647-74237666 Msa1123350:intron 30.0%
!!! TACCTTGTATTTTTTGAGGT+GGG + chr7_3:74237651-74237670 Msa1123350:intron 30.0%
! AGATAAACTACTGATGATGA+GGG - chr7_3:74237696-74237715 None:intergenic 30.0%
! AAGATAAACTACTGATGATG+AGG - chr7_3:74237697-74237716 None:intergenic 30.0%
AAAACACCGAAATGAAACAA+AGG - chr7_3:74237839-74237858 None:intergenic 30.0%
CTCTTCAGTATTGTGAATTA+TGG + chr7_3:74237885-74237904 Msa1123350:three_prime_UTR 30.0%
! GTATCTGTGATTTTTGTTCA+CGG + chr7_3:74238025-74238044 Msa1123350:three_prime_UTR 30.0%
AAATGAAGAAAAACGGTAAC+GGG + chr7_3:74238053-74238072 Msa1123350:three_prime_UTR 30.0%
GAGAGAGAGGGTTATATTAT+AGG - chr7_3:74232710-74232729 None:intergenic 35.0%
CAAAAAAACCATATGGGTCA+AGG + chr7_3:74232770-74232789 Msa1123350:exon 35.0%
AAAGGACAAGAAATTCGAAC+CGG + chr7_3:74232853-74232872 Msa1123350:CDS 35.0%
AGCTGAAGAAGATAGATCTA+AGG + chr7_3:74233069-74233088 Msa1123350:CDS 35.0%
!! CCATGCTATTGTTTCAAGTT+CGG + chr7_3:74233153-74233172 Msa1123350:CDS 35.0%
CAACTGATCCTTATCAACAA+AGG - chr7_3:74233209-74233228 None:intergenic 35.0%
! CTTTGTTGATAAGGATCAGT+TGG + chr7_3:74233207-74233226 Msa1123350:CDS 35.0%
!!! CGCTATTTTGATGCATAACA+AGG + chr7_3:74233240-74233259 Msa1123350:CDS 35.0%
! CATATAGTTGGAAGGTTGAT+TGG + chr7_3:74233400-74233419 Msa1123350:intron 35.0%
TCTAATAAGCCAAACCAAAC+AGG - chr7_3:74233503-74233522 None:intergenic 35.0%
CAGCTTATGAACAATGTCAT+AGG - chr7_3:74233581-74233600 None:intergenic 35.0%
GTATCAATAAAATGGTTGGC+GGG + chr7_3:74233880-74233899 Msa1123350:intron 35.0%
! GTACACTATGCTCTTTTTGA+GGG + chr7_3:74233902-74233921 Msa1123350:intron 35.0%
!! TACACTATGCTCTTTTTGAG+GGG + chr7_3:74233903-74233922 Msa1123350:intron 35.0%
! GGACATAGATGAGAGAATTT+TGG + chr7_3:74234007-74234026 Msa1123350:intron 35.0%
CTTTGTGTTCTATCTTCACT+TGG + chr7_3:74234076-74234095 Msa1123350:intron 35.0%
! GTGAATTTTGTGATGCAGTA+AGG + chr7_3:74234219-74234238 Msa1123350:intron 35.0%
! TCAAGATGAAGTTGATCCAA+TGG + chr7_3:74234309-74234328 Msa1123350:CDS 35.0%
ATGTCAGCATATGATTCCAA+AGG - chr7_3:74234361-74234380 None:intergenic 35.0%
TTGGAATCATATGCTGACAT+TGG + chr7_3:74234361-74234380 Msa1123350:CDS 35.0%
ATACAGTTCAGGATGTGTAA+GGG - chr7_3:74234434-74234453 None:intergenic 35.0%
CCAATATCTTCATACAGTTC+AGG - chr7_3:74234445-74234464 None:intergenic 35.0%
CCTGAACTGTATGAAGATAT+TGG + chr7_3:74234442-74234461 Msa1123350:CDS 35.0%
TATAAAATGACTCCCTTTGG+AGG - chr7_3:74234475-74234494 None:intergenic 35.0%
CCATATAAAATGACTCCCTT+TGG - chr7_3:74234478-74234497 None:intergenic 35.0%
!! CCAAAGGGAGTCATTTTATA+TGG + chr7_3:74234475-74234494 Msa1123350:CDS 35.0%
!! GTCATTTTATATGGAGAACC+TGG + chr7_3:74234484-74234503 Msa1123350:CDS 35.0%
! AGCATTTTTGTGTGTTTGAC+AGG + chr7_3:74234535-74234554 Msa1123350:intron 35.0%
! GCATTTTTGTGTGTTTGACA+GGG + chr7_3:74234536-74234555 Msa1123350:intron 35.0%
! TTTTGAACCCACTTCAAAAC+AGG + chr7_3:74234725-74234744 Msa1123350:intron 35.0%
! TTCTCTAAGAGAGATTTGTG+TGG + chr7_3:74234916-74234935 Msa1123350:intron 35.0%
! AGAGAGATTTGTGTGGTTTT+TGG + chr7_3:74234923-74234942 Msa1123350:intron 35.0%
AAGTGCAAGTAACCAAACAA+AGG + chr7_3:74235129-74235148 Msa1123350:intron 35.0%
AGTGCAAGTAACCAAACAAA+GGG + chr7_3:74235130-74235149 Msa1123350:intron 35.0%
TCTGCTTCTTAAGTACTCAT+TGG + chr7_3:74235158-74235177 Msa1123350:intron 35.0%
GCATGTGATCTTTACTTGTA+TGG + chr7_3:74235190-74235209 Msa1123350:intron 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr7_3:74235421-74235440 None:intergenic 35.0%
ATTGATGAAATTGACGCTGT+TGG + chr7_3:74235478-74235497 Msa1123350:CDS 35.0%
CGTTATTGAGTATCAGCTTA+AGG + chr7_3:74235513-74235532 Msa1123350:intron 35.0%
AATGTGTCCTTTCTTGAATG+TGG + chr7_3:74235550-74235569 Msa1123350:intron 35.0%
CAAAATGCCACATTCAAGAA+AGG - chr7_3:74235560-74235579 None:intergenic 35.0%
TGAAATTCAAAGGACCATGT+TGG + chr7_3:74235692-74235711 Msa1123350:CDS 35.0%
ATCAAGGCTTTCAATTCTGT+TGG - chr7_3:74235778-74235797 None:intergenic 35.0%
!!! GTCTCCTAGTTTTGATATCA+GGG - chr7_3:74235851-74235870 None:intergenic 35.0%
! ACACCTTTAAAAAAAGTCGC+AGG + chr7_3:74236384-74236403 Msa1123350:intron 35.0%
TTGGGTAAGAATCTCCTTAA+AGG + chr7_3:74236452-74236471 Msa1123350:intron 35.0%
AGTGATGGTTTAAGCCTTTA+AGG - chr7_3:74236469-74236488 None:intergenic 35.0%
! GCTCCTGAAAAGATCAATTT+TGG + chr7_3:74236528-74236547 Msa1123350:intron 35.0%
TGAACTACGATATGTAGTCT+GGG - chr7_3:74236584-74236603 None:intergenic 35.0%
!!! GCTAATCTCACCCATTTTTT+TGG + chr7_3:74236715-74236734 Msa1123350:intron 35.0%
ATCGAAACAGAGAAGGATAT+AGG - chr7_3:74236831-74236850 None:intergenic 35.0%
TTTCTCTTGCTCACAAATTC+TGG + chr7_3:74236935-74236954 Msa1123350:intron 35.0%
GTGCTTGCATGTAAACTAAA+AGG - chr7_3:74236976-74236995 None:intergenic 35.0%
TTAAAGCTCACGCATATGTA+GGG - chr7_3:74237091-74237110 None:intergenic 35.0%
ATTAAAGCTCACGCATATGT+AGG - chr7_3:74237092-74237111 None:intergenic 35.0%
AAAAATACCCAGGACATGAA+TGG - chr7_3:74237169-74237188 None:intergenic 35.0%
ATTCACTTGATTTAGCAGAG+TGG + chr7_3:74237379-74237398 Msa1123350:intron 35.0%
!! ATGGTGGTGAAAGTTTTTCT+TGG + chr7_3:74237487-74237506 Msa1123350:intron 35.0%
AGATCTCGAATATGACTACT+AGG - chr7_3:74237567-74237586 None:intergenic 35.0%
!!! GTACCTTGTATTTTTTGAGG+TGG + chr7_3:74237650-74237669 Msa1123350:intron 35.0%
AACCCACCTCAAAAAATACA+AGG - chr7_3:74237656-74237675 None:intergenic 35.0%
!!! TTGTATTTTTTGAGGTGGGT+TGG + chr7_3:74237655-74237674 Msa1123350:intron 35.0%
! GATAAACTACTGATGATGAG+GGG - chr7_3:74237695-74237714 None:intergenic 35.0%
TGCCTTCTTAAAATCAGCAT+GGG - chr7_3:74237733-74237752 None:intergenic 35.0%
TTGCCTTCTTAAAATCAGCA+TGG - chr7_3:74237734-74237753 None:intergenic 35.0%
CTTCACATATACAATCCTTC+AGG - chr7_3:74237792-74237811 None:intergenic 35.0%
! ATTTTCCATAATCCTCGACA+AGG + chr7_3:74237956-74237975 Msa1123350:three_prime_UTR 35.0%
TACTAGCCCAAGGAATAAAT+AGG - chr7_3:74238090-74238109 None:intergenic 35.0%
!! TATTTATTCCTTGGGCTAGT+AGG + chr7_3:74238089-74238108 Msa1123350:three_prime_UTR 35.0%
ATAGGACGATGTGTTGGAAT+TGG - chr7_3:74232692-74232711 None:intergenic 40.0%
TCGCAAACAGCGAAAACAAA+AGG + chr7_3:74232898-74232917 Msa1123350:CDS 40.0%
CGCAAACAGCGAAAACAAAA+GGG + chr7_3:74232899-74232918 Msa1123350:CDS 40.0%
CGAAGTTTGCACTTCGATAA+CGG - chr7_3:74232959-74232978 None:intergenic 40.0%
CGTTATCGAAGTGCAAACTT+CGG + chr7_3:74232957-74232976 Msa1123350:CDS 40.0%
CAAACTTCGGTTACTGAAAC+TGG + chr7_3:74232970-74232989 Msa1123350:CDS 40.0%
ACTGAAACTGGAACGAATCA+AGG + chr7_3:74232982-74233001 Msa1123350:CDS 40.0%
AGAAGAGTTTGTAGCGAATC+AGG + chr7_3:74233021-74233040 Msa1123350:CDS 40.0%
AGTTTGTAGCGAATCAGGAA+AGG + chr7_3:74233026-74233045 Msa1123350:CDS 40.0%
!! TCTAAGGTTGATGATCTTCG+TGG + chr7_3:74233085-74233104 Msa1123350:CDS 40.0%
TCAAGATTGCCAACACTCAT+AGG - chr7_3:74233115-74233134 None:intergenic 40.0%
CCGAACTTGAAACAATAGCA+TGG - chr7_3:74233156-74233175 None:intergenic 40.0%
!! GCTATTGTTTCAAGTTCGGT+TGG + chr7_3:74233157-74233176 Msa1123350:CDS 40.0%
! TTGGACCGGAGTATTATGTT+GGG + chr7_3:74233176-74233195 Msa1123350:CDS 40.0%
!! ACCTCGTGTATGTTTGGTTT+TGG + chr7_3:74233426-74233445 Msa1123350:intron 40.0%
ACCAAAACCAAACATACACG+AGG - chr7_3:74233430-74233449 None:intergenic 40.0%
! AATTTTGGGCCTGTTTGGTT+TGG + chr7_3:74233491-74233510 Msa1123350:intron 40.0%
! TGACATGTGTTTTGTGAGTC+TGG + chr7_3:74233533-74233552 Msa1123350:intron 40.0%
CAAGAGTCATGACATTCACT+AGG + chr7_3:74233785-74233804 Msa1123350:intron 40.0%
! GGTACACTATGCTCTTTTTG+AGG + chr7_3:74233901-74233920 Msa1123350:intron 40.0%
TACCAGGTTCTTTCTGTTGT+TGG + chr7_3:74234280-74234299 Msa1123350:intron 40.0%
TCCAATGGTCTCTGTAATGA+AGG + chr7_3:74234324-74234343 Msa1123350:CDS 40.0%
ACCTTCATTACAGAGACCAT+TGG - chr7_3:74234328-74234347 None:intergenic 40.0%
CTCTGTAATGAAGGTTGAGA+AGG + chr7_3:74234333-74234352 Msa1123350:CDS 40.0%
GAATCATATGCTGACATTGG+TGG + chr7_3:74234364-74234383 Msa1123350:CDS 40.0%
TACAGTTCAGGATGTGTAAG+GGG - chr7_3:74234433-74234452 None:intergenic 40.0%
CATACAGTTCAGGATGTGTA+AGG - chr7_3:74234435-74234454 None:intergenic 40.0%
TATTGGTATCAAGCCTCCAA+AGG + chr7_3:74234459-74234478 Msa1123350:CDS 40.0%
ATTGGTATCAAGCCTCCAAA+GGG + chr7_3:74234460-74234479 Msa1123350:CDS 40.0%
TTATATGGAGAACCTGGAAC+CGG + chr7_3:74234490-74234509 Msa1123350:CDS 40.0%
!! CTTTGCAAGAAGTGTCTTTC+CGG - chr7_3:74234512-74234531 None:intergenic 40.0%
TCAAAAAGTCTTCCGGTATG+GGG - chr7_3:74235054-74235073 None:intergenic 40.0%
CTCAAAAAGTCTTCCGGTAT+GGG - chr7_3:74235055-74235074 None:intergenic 40.0%
TCTCAAAAAGTCTTCCGGTA+TGG - chr7_3:74235056-74235075 None:intergenic 40.0%
AGCAGAAACAACCCTTTGTT+TGG - chr7_3:74235144-74235163 None:intergenic 40.0%
GAATGTTGCTGATGTTGAGT+TGG - chr7_3:74235350-74235369 None:intergenic 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr7_3:74235411-74235430 Msa1123350:CDS 40.0%
! ACTTTTCTGATATGCCATGC+AGG + chr7_3:74235643-74235662 Msa1123350:intron 40.0%
! ATTTTCCTGTCTATTCGACC+TGG - chr7_3:74235816-74235835 None:intergenic 40.0%
!!! CTAGTTTTGATATCAGGGAG+AGG - chr7_3:74235846-74235865 None:intergenic 40.0%
CTCTCCCTGATATCAAAACT+AGG + chr7_3:74235844-74235863 Msa1123350:CDS 40.0%
!!! CGTCTCCTAGTTTTGATATC+AGG - chr7_3:74235852-74235871 None:intergenic 40.0%
! AACTAGGAGACGCATTTTCA+CGG + chr7_3:74235860-74235879 Msa1123350:CDS 40.0%
ATGACTAAGGATGAGTTCTC+TGG + chr7_3:74236036-74236055 Msa1123350:CDS 40.0%
AAAGCAATATGTACCGAAGC+TGG + chr7_3:74236069-74236088 Msa1123350:CDS 40.0%
TAAAGCAAGTAAGCCAGCTT+CGG - chr7_3:74236085-74236104 None:intergenic 40.0%
! CTTCCACATGATCAGCTTTT+TGG - chr7_3:74236193-74236212 None:intergenic 40.0%
CAAAAAGCTGATCATGTGGA+AGG + chr7_3:74236191-74236210 Msa1123350:intron 40.0%
AAGTCGCAGGAAAAATGAAG+TGG + chr7_3:74236397-74236416 Msa1123350:intron 40.0%
AGTCGCAGGAAAAATGAAGT+GGG + chr7_3:74236398-74236417 Msa1123350:intron 40.0%
! GCCCCAAAATTGATCTTTTC+AGG - chr7_3:74236534-74236553 None:intergenic 40.0%
TGGGTTCTTTCGAATGAAGA+AGG - chr7_3:74236565-74236584 None:intergenic 40.0%
CTGAACTACGATATGTAGTC+TGG - chr7_3:74236585-74236604 None:intergenic 40.0%
ATCTGCAAAGCCAAAACACT+CGG - chr7_3:74236686-74236705 None:intergenic 40.0%
AAAGCCAGAAAATTCAGGCT+AGG - chr7_3:74236900-74236919 None:intergenic 40.0%
CAAGAGAAAAAAGGGTTGCT+GGG - chr7_3:74236924-74236943 None:intergenic 40.0%
! ATGCGTGAGCTTTAATGCAT+TGG + chr7_3:74237096-74237115 Msa1123350:intron 40.0%
! TGCGTGAGCTTTAATGCATT+GGG + chr7_3:74237097-74237116 Msa1123350:intron 40.0%
TGGAGCTTACCTAAACAAAC+AGG - chr7_3:74237278-74237297 None:intergenic 40.0%
!!! TGGTGTGTTTTTTAACCGCA+AGG + chr7_3:74237541-74237560 Msa1123350:intron 40.0%
AATATGACTACTAGGCCTTG+CGG - chr7_3:74237559-74237578 None:intergenic 40.0%
!!! GACCCATGCTGATTTTAAGA+AGG + chr7_3:74237728-74237747 Msa1123350:CDS 40.0%
AAATGAAACAAAGGAGGCAG+GGG - chr7_3:74237830-74237849 None:intergenic 40.0%
GAAATGAAACAAAGGAGGCA+GGG - chr7_3:74237831-74237850 None:intergenic 40.0%
! CTGCCTCCTTTGTTTCATTT+CGG + chr7_3:74237830-74237849 Msa1123350:three_prime_UTR 40.0%
ACACCGAAATGAAACAAAGG+AGG - chr7_3:74237836-74237855 None:intergenic 40.0%
!! CAAGGTATGGTGTTTTGTTG+CGG + chr7_3:74237974-74237993 Msa1123350:three_prime_UTR 40.0%
AGAGTGAAGTGAGAGAGAGA+GGG - chr7_3:74232722-74232741 None:intergenic 45.0%
AAGAGTGAAGTGAGAGAGAG+AGG - chr7_3:74232723-74232742 None:intergenic 45.0%
!! TTCGATAACGGAGTTACCGT+CGG - chr7_3:74232947-74232966 None:intergenic 45.0%
!! TGTTTCAAGTTCGGTTGGAC+CGG + chr7_3:74233162-74233181 Msa1123350:CDS 45.0%
! GTTGGACCGGAGTATTATGT+TGG + chr7_3:74233175-74233194 Msa1123350:CDS 45.0%
GATAAGGATCAGTTGGAACC+TGG + chr7_3:74233214-74233233 Msa1123350:CDS 45.0%
TGCATCAAAATAGCGCAACC+AGG - chr7_3:74233235-74233254 None:intergenic 45.0%
TGGGAAACCTCGTGTATGTT+TGG + chr7_3:74233420-74233439 Msa1123350:intron 45.0%
! ATGATGCTTGGCTCTTTACC+AGG + chr7_3:74234264-74234283 Msa1123350:intron 45.0%
GTCCAACAACAGAAAGAACC+TGG - chr7_3:74234285-74234304 None:intergenic 45.0%
TGGTTTAGATGCCCAGATAC+AGG + chr7_3:74234384-74234403 Msa1123350:CDS 45.0%
CGGAAAGACACTTCTTGCAA+AGG + chr7_3:74234510-74234529 Msa1123350:CDS 45.0%
TGTGTGTTTGACAGGGCTAT+TGG + chr7_3:74234543-74234562 Msa1123350:intron 45.0%
GAGGCCATTTAACCCAAGAT+TGG - chr7_3:74234765-74234784 None:intergenic 45.0%
! GAAGACACTGACTAGGTAGT+AGG - chr7_3:74235032-74235051 None:intergenic 45.0%
! AGAGTGCTTCCTTTGCTTTC+AGG + chr7_3:74235318-74235337 Msa1123350:intron 45.0%
GCAACATTCTTGCGTGTTGT+TGG + chr7_3:74235361-74235380 Msa1123350:CDS 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr7_3:74235410-74235429 Msa1123350:CDS 45.0%
TTGACGCTGTTGGTACAAAG+AGG + chr7_3:74235488-74235507 Msa1123350:CDS 45.0%
!!! TGGCATTTTGTTTTGGGCGT+AGG + chr7_3:74235570-74235589 Msa1123350:intron 45.0%
!!! GGCATTTTGTTTTGGGCGTA+GGG + chr7_3:74235571-74235590 Msa1123350:intron 45.0%
!!! GCATTTTGTTTTGGGCGTAG+GGG + chr7_3:74235572-74235591 Msa1123350:intron 45.0%
! GTGGAGAGCGTGAAATTCAA+AGG + chr7_3:74235682-74235701 Msa1123350:CDS 45.0%
GAGTTGCTGAACCAGTTAGA+TGG + chr7_3:74235714-74235733 Msa1123350:CDS 45.0%
TAAGACCAGGTCGAATAGAC+AGG + chr7_3:74235808-74235827 Msa1123350:CDS 45.0%
TTTACGAGAACGCCGAATGA+AGG + chr7_3:74236101-74236120 Msa1123350:CDS 45.0%
TGGCCAAAAAGCTGATCATG+TGG + chr7_3:74236187-74236206 Msa1123350:intron 45.0%
AAGCCAAAACACTCGGCAAA+GGG - chr7_3:74236679-74236698 None:intergenic 45.0%
AAAGCCAAAACACTCGGCAA+AGG - chr7_3:74236680-74236699 None:intergenic 45.0%
GGATTGCATCGAAACAGAGA+AGG - chr7_3:74236838-74236857 None:intergenic 45.0%
GTTTCGATGCAATCCCTTCT+AGG + chr7_3:74236843-74236862 Msa1123350:intron 45.0%
GCAGTGTGTTGTACCTAGAA+GGG - chr7_3:74236859-74236878 None:intergenic 45.0%
AGCAGTGTGTTGTACCTAGA+AGG - chr7_3:74236860-74236879 None:intergenic 45.0%
TGGGCAAAGCCAGAAAATTC+AGG - chr7_3:74236905-74236924 None:intergenic 45.0%
GCAAGAGAAAAAAGGGTTGC+TGG - chr7_3:74236925-74236944 None:intergenic 45.0%
! GTGTTCCGTGTTTTCTGACA+CGG + chr7_3:74237064-74237083 Msa1123350:intron 45.0%
! GCGTGAGCTTTAATGCATTG+GGG + chr7_3:74237098-74237117 Msa1123350:intron 45.0%
ATCGTTGACCATTCATGTCC+TGG + chr7_3:74237158-74237177 Msa1123350:intron 45.0%
TCGTTGACCATTCATGTCCT+GGG + chr7_3:74237159-74237178 Msa1123350:intron 45.0%
CGAAATGAAACAAAGGAGGC+AGG - chr7_3:74237832-74237851 None:intergenic 45.0%
CCATACCTTGTCGAGGATTA+TGG - chr7_3:74237964-74237983 None:intergenic 45.0%
CCATAATCCTCGACAAGGTA+TGG + chr7_3:74237961-74237980 Msa1123350:three_prime_UTR 45.0%
CAAAACACCATACCTTGTCG+AGG - chr7_3:74237971-74237990 None:intergenic 45.0%
!! TTATTCCTTGGGCTAGTAGG+AGG + chr7_3:74238092-74238111 Msa1123350:three_prime_UTR 45.0%
!!! AAAAGTTTTTATAAAATTTT+GGG + chr7_3:74233477-74233496 Msa1123350:intron 5.0%
!! AAAAAAAAAAAATATTAGAA+TGG + chr7_3:74237468-74237487 Msa1123350:intron 5.0%
CTGGTGTTCCTTGACCCATA+TGG - chr7_3:74232781-74232800 None:intergenic 50.0%
CATATGGGTCAAGGAACACC+AGG + chr7_3:74232779-74232798 Msa1123350:exon 50.0%
ACCAGACGGCAACGACAAAA+AGG + chr7_3:74232835-74232854 Msa1123350:CDS 50.0%
! TCCTTTTTGTCGTTGCCGTC+TGG - chr7_3:74232839-74232858 None:intergenic 50.0%
GGACAAGAAATTCGAACCGG+CGG + chr7_3:74232856-74232875 Msa1123350:CDS 50.0%
GCGAAAACAAAAGGGTTCCG+AGG + chr7_3:74232907-74232926 Msa1123350:CDS 50.0%
TCAGGAAAGGTTGAAGCCTC+AGG + chr7_3:74233039-74233058 Msa1123350:CDS 50.0%
TCTTCAGCTTTCTCCTCCTG+AGG - chr7_3:74233058-74233077 None:intergenic 50.0%
GAAGGTTGAGAAGGCTCCTT+TGG + chr7_3:74234342-74234361 Msa1123350:CDS 50.0%
!! AGAAGTGTCTTTCCGGTTCC+AGG - chr7_3:74234505-74234524 None:intergenic 50.0%
! GTATGGGGAAGACACTGACT+AGG - chr7_3:74235039-74235058 None:intergenic 50.0%
AGTCAGTGTCTTCCCCATAC+CGG + chr7_3:74235039-74235058 Msa1123350:intron 50.0%
CTTCCTTTGCTTTCAGGCTG+TGG + chr7_3:74235324-74235343 Msa1123350:intron 50.0%
GAGTGAGCATCATACCTGCA+TGG - chr7_3:74235660-74235679 None:intergenic 50.0%
TGCAGGTATGATGCTCACTC+AGG + chr7_3:74235660-74235679 Msa1123350:intron 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr7_3:74235663-74235682 Msa1123350:intron 50.0%
CTGGTTCAGCAACTCCAACA+TGG - chr7_3:74235709-74235728 None:intergenic 50.0%
GTCTTAGCAGAGCTGGATCA+AGG - chr7_3:74235794-74235813 None:intergenic 50.0%
! AGGAGACGCATTTTCACGGT+AGG + chr7_3:74235864-74235883 Msa1123350:intron 50.0%
CGTAGTTCAGCTCTTCTCGT+TGG + chr7_3:74236595-74236614 Msa1123350:intron 50.0%
TTATGAGGCAGCTGCAGGAT+GGG - chr7_3:74236654-74236673 None:intergenic 50.0%
ACTCGGCAAAGGGAGTTATG+AGG - chr7_3:74236669-74236688 None:intergenic 50.0%
! ACTCCCTTTGCCGAGTGTTT+TGG + chr7_3:74236673-74236692 Msa1123350:intron 50.0%
AGGTACAACACACTGCTTGC+AGG + chr7_3:74236863-74236882 Msa1123350:intron 50.0%
! ACTGCTTGCAGGCATTGTTC+TGG + chr7_3:74236874-74236893 Msa1123350:intron 50.0%
! CTGGCCTAGCCTGAATTTTC+TGG + chr7_3:74236893-74236912 Msa1123350:intron 50.0%
AGGGTCCGTGTCAGAAAACA+CGG - chr7_3:74237072-74237091 None:intergenic 50.0%
!! AAGAAAGAAGGGGTGCCTGA+AGG + chr7_3:74237774-74237793 Msa1123350:CDS 50.0%
AAAGGAGGCAGGGGTAAATG+AGG - chr7_3:74237821-74237840 None:intergenic 50.0%
ATACACCTCCTACTAGCCCA+AGG - chr7_3:74238100-74238119 None:intergenic 50.0%
ATGGGTCAAGGAACACCAGG+AGG + chr7_3:74232782-74232801 Msa1123350:CDS 55.0%
! TGTCGTTGCCGTCTGGTTTC+CGG - chr7_3:74232832-74232851 None:intergenic 55.0%
GGAAAGGTTGAAGCCTCAGG+AGG + chr7_3:74233042-74233061 Msa1123350:CDS 55.0%
CGTGGTTCGCCTATGAGTGT+TGG + chr7_3:74233103-74233122 Msa1123350:CDS 55.0%
TGGCCACAGCCTGAAAGCAA+AGG - chr7_3:74235330-74235349 None:intergenic 55.0%
!! TTTTGGGCGTAGGGGTGTGT+GGG + chr7_3:74235580-74235599 Msa1123350:intron 55.0%
GATCCAGCTCTGCTAAGACC+AGG + chr7_3:74235795-74235814 Msa1123350:CDS 55.0%
GTTATGAGGCAGCTGCAGGA+TGG - chr7_3:74236655-74236674 None:intergenic 55.0%
ACTGGCGGTGACTGTTTCAC+TGG + chr7_3:74237521-74237540 Msa1123350:intron 55.0%
GGTCAAGGAACACCAGGAGG+CGG + chr7_3:74232785-74232804 Msa1123350:CDS 60.0%
CACCAGGAGGCGGTTTGAAC+CGG + chr7_3:74232795-74232814 Msa1123350:CDS 60.0%
AGGCGGTTTGAACCGGCAAC+CGG + chr7_3:74232802-74232821 Msa1123350:CDS 60.0%
!! GTTTTGGGCGTAGGGGTGTG+TGG + chr7_3:74235579-74235598 Msa1123350:intron 60.0%
! GTAGGGGTGTGTGGGAACAG+TGG + chr7_3:74235588-74235607 Msa1123350:intron 60.0%
!! CGACCTGGTCTTAGCAGAGC+TGG - chr7_3:74235801-74235820 None:intergenic 60.0%
GGGAGTTATGAGGCAGCTGC+AGG - chr7_3:74236659-74236678 None:intergenic 60.0%
!! TGCCGGTTCAAACCGCCTCC+TGG - chr7_3:74232800-74232819 None:intergenic 65.0%
GGCGGTTTGAACCGGCAACC+GGG + chr7_3:74232803-74232822 Msa1123350:CDS 65.0%
TGAACCGGCAACCGGGTGAC+CGG + chr7_3:74232810-74232829 Msa1123350:CDS 65.0%
GTTTCCGGTCACCCGGTTGC+CGG - chr7_3:74232817-74232836 None:intergenic 65.0%
! CCGTCTGGTTTCCGGTCACC+CGG - chr7_3:74232824-74232843 None:intergenic 65.0%
CCGGGTGACCGGAAACCAGA+CGG + chr7_3:74232821-74232840 Msa1123350:CDS 65.0%
ATTCGAACCGGCGGCACCAC+CGG + chr7_3:74232865-74232884 Msa1123350:CDS 65.0%
TGTTTGCGACCGACGCGAGC+CGG - chr7_3:74232887-74232906 None:intergenic 65.0%
GGGGTGTGTGGGAACAGTGG+AGG + chr7_3:74235591-74235610 Msa1123350:intron 65.0%
GGCAGCTGCAGGATGGGTCA+CGG - chr7_3:74236648-74236667 None:intergenic 65.0%
AGGGTTCCGAGGCTGCGTCG+CGG + chr7_3:74232918-74232937 Msa1123350:CDS 70.0%
TTGCGACCGACGCGAGCCGG+TGG - chr7_3:74232884-74232903 None:intergenic 75.0%
CGGCAACCGCGACGCAGCCT+CGG - chr7_3:74232927-74232946 None:intergenic 75.0%
GGCTGCGTCGCGGTTGCCGA+CGG + chr7_3:74232928-74232947 Msa1123350:CDS 75.0%
!!! ACGCGAGCCGGTGGTGCCGC+CGG - chr7_3:74232875-74232894 None:intergenic 80.0%
!!! GCGGCACCACCGGCTCGCGT+CGG + chr7_3:74232875-74232894 Msa1123350:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 74232688 74238207 74232688 ID=Msa1123350;Name=Msa1123350
chr7_3 mRNA 74232688 74238207 74232688 ID=Msa1123350-mRNA-1;Parent=Msa1123350;Name=Msa1123350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=94|1|1|1|1|1|6|398|445
chr7_3 exon 74232688 74233261 74232688 ID=Msa1123350-mRNA-1:exon:19730;Parent=Msa1123350-mRNA-1
chr7_3 exon 74234286 74234531 74234286 ID=Msa1123350-mRNA-1:exon:19731;Parent=Msa1123350-mRNA-1
chr7_3 exon 74235340 74235509 74235340 ID=Msa1123350-mRNA-1:exon:19732;Parent=Msa1123350-mRNA-1
chr7_3 exon 74235665 74235881 74235665 ID=Msa1123350-mRNA-1:exon:19733;Parent=Msa1123350-mRNA-1
chr7_3 exon 74235982 74236122 74235982 ID=Msa1123350-mRNA-1:exon:19734;Parent=Msa1123350-mRNA-1
chr7_3 exon 74237726 74238207 74237726 ID=Msa1123350-mRNA-1:exon:19735;Parent=Msa1123350-mRNA-1
chr7_3 five_prime_UTR 74232688 74232781 74232688 ID=Msa1123350-mRNA-1:five_prime_utr;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74232782 74233261 74232782 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74234286 74234531 74234286 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74235340 74235509 74235340 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74235665 74235881 74235665 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74235982 74236122 74235982 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 CDS 74237726 74237809 74237726 ID=Msa1123350-mRNA-1:cds;Parent=Msa1123350-mRNA-1
chr7_3 three_prime_UTR 74237810 74238207 74237810 ID=Msa1123350-mRNA-1:three_prime_utr;Parent=Msa1123350-mRNA-1
Gene Sequence

>Msa1123350

ATGGGTCAAGGAACACCAGGAGGCGGTTTGAACCGGCAACCGGGTGACCGGAAACCAGACGGCAACGACAAAAAGGACAAGAAATTCGAACCGGCGGCACCACCGGCTCGCGTCGGTCGCAAACAGCGAAAACAAAAGGGTTCCGAGGCTGCGTCGCGGTTGCCGACGGTAACTCCGTTATCGAAGTGCAAACTTCGGTTACTGAAACTGGAACGAATCAAGGACTATTTGTTAATGGAAGAAGAGTTTGTAGCGAATCAGGAAAGGTTGAAGCCTCAGGAGGAGAAAGCTGAAGAAGATAGATCTAAGGTTGATGATCTTCGTGGTTCGCCTATGAGTGTTGGCAATCTTGAAGAGCTTATTGATGAGAACCATGCTATTGTTTCAAGTTCGGTTGGACCGGAGTATTATGTTGGGATTTTGTCCTTTGTTGATAAGGATCAGTTGGAACCTGGTTGCGCTATTTTGATGCATAACAAGGTTCTTTCTGTTGTTGGACTTCTTCAAGATGAAGTTGATCCAATGGTCTCTGTAATGAAGGTTGAGAAGGCTCCTTTGGAATCATATGCTGACATTGGTGGTTTAGATGCCCAGATACAGGAAATTAAAGAAGCTGTAGAGCTTCCCCTTACACATCCTGAACTGTATGAAGATATTGGTATCAAGCCTCCAAAGGGAGTCATTTTATATGGAGAACCTGGAACCGGAAAGACACTTCTTGCAAAGGCTGTGGCCAACTCAACATCAGCAACATTCTTGCGTGTTGTTGGTAGTGAATTGATTCAAAAATACTTAGGAGATGGTCCAAAACTTGTGAGGGAACTTTTTCGAGTTGCTGATGATCTTTCTCCCTCTATTGTCTTTATTGATGAAATTGACGCTGTTGGTACAAAGAGGTATGATGCTCACTCAGGTGGAGAGCGTGAAATTCAAAGGACCATGTTGGAGTTGCTGAACCAGTTAGATGGTTTTGATTCTAGAGGAGATGTTAAAGTTATTCTCGCAACCAACAGAATTGAAAGCCTTGATCCAGCTCTGCTAAGACCAGGTCGAATAGACAGGAAAATTGAATTTCCTCTCCCTGATATCAAAACTAGGAGACGCATTTTCACGATACATACATCTAGGATGACATTAGCTGACGATGTCAATTTAGAAGAATTTGTCATGACTAAGGATGAGTTCTCTGGAGCTGATATAAAAGCAATATGTACCGAAGCTGGCTTACTTGCTTTACGAGAACGCCGAATGAAGGTGACCCATGCTGATTTTAAGAAGGCAAAAGATAAAGTTATGTTTAAGAAGAAAGAAGGGGTGCCTGAAGGATTGTATATGTGA
Protein sequence

>Msa1123350

MGQGTPGGGLNRQPGDRKPDGNDKKDKKFEPAAPPARVGRKQRKQKGSEAASRLPTVTPLSKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFTIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKDKVMFKKKEGVPEGLYM*