Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465170 | KEH35225.1 | 48.182 | 220 | 84 | 6 | 97 | 294 | 230 | 441 | 6.56e-46 | 171 |
| Msa0465170 | KEH35225.1 | 57.317 | 82 | 31 | 2 | 32 | 111 | 325 | 404 | 2.02e-16 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465170 | A0A072VAK7 | 48.182 | 220 | 84 | 6 | 97 | 294 | 230 | 441 | 3.14e-46 | 171 |
| Msa0465170 | A0A072VAK7 | 57.317 | 82 | 31 | 2 | 32 | 111 | 325 | 404 | 9.63e-17 | 90.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0068630 | Msa0465170 | 0.834826 | 2.394003e-56 | -8.615850e-47 |
| Msa0162580 | Msa0465170 | 0.805318 | 1.414185e-49 | -8.615850e-47 |
| Msa0465170 | Msa1398620 | 0.960742 | 6.666196e-119 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465170 | MtrunA17_Chr3g0142541 | 50.000 | 202 | 75 | 6 | 97 | 294 | 139 | 318 | 7.32e-44 | 152 |
| Msa0465170 | MtrunA17_Chr3g0142541 | 58.140 | 86 | 33 | 1 | 48 | 130 | 215 | 300 | 7.75e-22 | 93.2 |
| Msa0465170 | MtrunA17_Chr3g0120901 | 46.000 | 200 | 81 | 6 | 97 | 294 | 125 | 299 | 1.44e-42 | 148 |
| Msa0465170 | MtrunA17_Chr3g0120901 | 68.750 | 64 | 18 | 1 | 48 | 111 | 201 | 262 | 5.75e-20 | 87.8 |
| Msa0465170 | MtrunA17_Chr7g0250281 | 78.947 | 95 | 12 | 3 | 201 | 294 | 56 | 143 | 2.51e-42 | 142 |
| Msa0465170 | MtrunA17_Chr7g0250281 | 58.228 | 79 | 29 | 1 | 48 | 126 | 49 | 123 | 1.99e-24 | 95.9 |
| Msa0465170 | MtrunA17_Chr1g0167711 | 62.105 | 95 | 35 | 1 | 201 | 294 | 56 | 150 | 1.96e-34 | 122 |
| Msa0465170 | MtrunA17_Chr1g0167711 | 49.438 | 89 | 44 | 1 | 51 | 138 | 52 | 140 | 1.85e-20 | 85.9 |
| Msa0465170 | MtrunA17_Chr7g0236141 | 51.579 | 95 | 41 | 3 | 204 | 294 | 130 | 223 | 4.93e-24 | 97.4 |
| Msa0465170 | MtrunA17_Chr7g0236141 | 44.118 | 68 | 36 | 1 | 65 | 130 | 135 | 202 | 3.39e-13 | 67.4 |
| Msa0465170 | MtrunA17_Chr7g0236091 | 51.579 | 95 | 41 | 3 | 204 | 294 | 130 | 223 | 4.93e-24 | 97.4 |
| Msa0465170 | MtrunA17_Chr7g0236091 | 44.118 | 68 | 36 | 1 | 65 | 130 | 135 | 202 | 3.39e-13 | 67.4 |
| Msa0465170 | MtrunA17_Chr7g0236181 | 51.579 | 95 | 41 | 3 | 204 | 294 | 130 | 223 | 4.93e-24 | 97.4 |
| Msa0465170 | MtrunA17_Chr7g0236181 | 44.118 | 68 | 36 | 1 | 65 | 130 | 135 | 202 | 3.39e-13 | 67.4 |
| Msa0465170 | MtrunA17_Chr7g0227651 | 59.091 | 88 | 31 | 3 | 210 | 293 | 296 | 382 | 2.50e-23 | 98.6 |
| Msa0465170 | MtrunA17_Chr7g0227651 | 44.444 | 63 | 30 | 1 | 48 | 110 | 286 | 343 | 4.47e-11 | 62.8 |
| Msa0465170 | MtrunA17_Chr7g0227631 | 59.091 | 88 | 31 | 3 | 210 | 293 | 222 | 308 | 3.89e-23 | 96.7 |
| Msa0465170 | MtrunA17_Chr7g0227631 | 44.444 | 63 | 30 | 1 | 48 | 110 | 212 | 269 | 9.37e-11 | 61.6 |
| Msa0465170 | MtrunA17_Chr7g0227641 | 59.091 | 88 | 31 | 3 | 210 | 293 | 278 | 364 | 1.85e-22 | 95.9 |
| Msa0465170 | MtrunA17_Chr7g0226471 | 53.125 | 96 | 36 | 5 | 207 | 294 | 53 | 147 | 3.03e-21 | 87.8 |
| Msa0465170 | MtrunA17_Chr7g0226471 | 50.000 | 56 | 27 | 1 | 57 | 111 | 53 | 108 | 7.50e-11 | 59.3 |
| Msa0465170 | MtrunA17_Chr3g0107721 | 59.494 | 79 | 28 | 2 | 220 | 294 | 342 | 420 | 4.57e-21 | 92.4 |
| Msa0465170 | MtrunA17_Chr5g0396411 | 49.020 | 102 | 43 | 4 | 197 | 294 | 301 | 397 | 4.95e-21 | 92.0 |
| Msa0465170 | MtrunA17_Chr7g0226481 | 48.958 | 96 | 44 | 3 | 203 | 294 | 256 | 350 | 1.63e-20 | 90.1 |
| Msa0465170 | MtrunA17_Chr7g0255101 | 50.526 | 95 | 43 | 3 | 203 | 294 | 388 | 481 | 1.80e-20 | 90.9 |
| Msa0465170 | MtrunA17_Chr7g0227841 | 52.941 | 85 | 38 | 2 | 211 | 294 | 94 | 177 | 1.98e-20 | 86.3 |
| Msa0465170 | MtrunA17_Chr7g0262091 | 51.064 | 94 | 39 | 3 | 205 | 294 | 301 | 391 | 2.16e-20 | 90.1 |
| Msa0465170 | MtrunA17_Chr7g0262091 | 41.304 | 92 | 49 | 2 | 56 | 142 | 291 | 382 | 2.84e-12 | 66.6 |
| Msa0465170 | MtrunA17_Chr7g0227831 | 51.136 | 88 | 36 | 4 | 210 | 293 | 36 | 120 | 2.41e-20 | 84.7 |
| Msa0465170 | MtrunA17_Chr1g0167231 | 52.500 | 80 | 34 | 2 | 218 | 293 | 55 | 134 | 3.44e-20 | 84.7 |
| Msa0465170 | MtrunA17_Chr3g0139601 | 46.602 | 103 | 45 | 4 | 197 | 293 | 378 | 476 | 3.95e-20 | 90.1 |
| Msa0465170 | MtrunA17_Chr3g0139601 | 38.462 | 78 | 45 | 1 | 53 | 130 | 380 | 454 | 2.69e-11 | 63.9 |
| Msa0465170 | MtrunA17_Chr7g0236211 | 48.958 | 96 | 44 | 3 | 203 | 294 | 295 | 389 | 6.16e-20 | 89.0 |
| Msa0465170 | MtrunA17_Chr7g0236111 | 53.086 | 81 | 34 | 2 | 218 | 294 | 49 | 129 | 1.29e-19 | 82.8 |
| Msa0465170 | MtrunA17_Chr7g0227851 | 43.860 | 114 | 50 | 3 | 191 | 294 | 272 | 381 | 3.51e-19 | 86.7 |
| Msa0465170 | MtrunA17_Chr1g0166251 | 52.632 | 95 | 34 | 4 | 204 | 294 | 299 | 386 | 5.09e-19 | 86.3 |
| Msa0465170 | MtrunA17_Chr7g0236151 | 53.086 | 81 | 34 | 2 | 218 | 294 | 237 | 317 | 7.16e-19 | 85.1 |
| Msa0465170 | MtrunA17_Chr7g0236191 | 53.086 | 81 | 34 | 2 | 218 | 294 | 237 | 317 | 7.16e-19 | 85.1 |
| Msa0465170 | MtrunA17_Chr5g0396401 | 55.556 | 81 | 30 | 3 | 218 | 294 | 299 | 377 | 7.65e-19 | 85.9 |
| Msa0465170 | MtrunA17_Chr7g0262081 | 47.000 | 100 | 45 | 3 | 202 | 293 | 301 | 400 | 1.75e-18 | 84.7 |
| Msa0465170 | MtrunA17_Chr7g0262121 | 47.000 | 100 | 45 | 3 | 202 | 293 | 293 | 392 | 2.10e-18 | 84.7 |
| Msa0465170 | MtrunA17_Chr3g0124051 | 53.247 | 77 | 32 | 2 | 221 | 293 | 219 | 295 | 5.79e-18 | 82.0 |
| Msa0465170 | MtrunA17_Chr5g0396391 | 57.534 | 73 | 25 | 4 | 218 | 288 | 151 | 219 | 8.08e-18 | 80.5 |
| Msa0465170 | MtrunA17_Chr5g0399841 | 40.171 | 117 | 57 | 5 | 191 | 294 | 67 | 183 | 2.88e-17 | 78.2 |
| Msa0465170 | MtrunA17_Chr3g0080781 | 48.864 | 88 | 38 | 3 | 213 | 293 | 97 | 184 | 3.18e-16 | 75.1 |
| Msa0465170 | MtrunA17_Chr5g0399361 | 47.619 | 84 | 40 | 3 | 214 | 294 | 147 | 229 | 3.98e-16 | 75.9 |
| Msa0465170 | MtrunA17_Chr3g0093361 | 52.381 | 84 | 32 | 3 | 215 | 294 | 324 | 403 | 4.53e-16 | 77.8 |
| Msa0465170 | MtrunA17_Chr3g0138571 | 50.000 | 84 | 37 | 3 | 214 | 293 | 304 | 386 | 4.31e-15 | 74.7 |
| Msa0465170 | MtrunA17_Chr3g0091171 | 53.086 | 81 | 30 | 3 | 215 | 291 | 287 | 363 | 4.57e-15 | 74.7 |
| Msa0465170 | MtrunA17_Chr7g0235431 | 41.053 | 95 | 52 | 2 | 203 | 293 | 279 | 373 | 5.13e-15 | 74.7 |
| Msa0465170 | MtrunA17_Chr3g0138561 | 47.500 | 80 | 38 | 2 | 218 | 293 | 90 | 169 | 9.90e-15 | 71.2 |
| Msa0465170 | MtrunA17_Chr4g0041551 | 41.905 | 105 | 56 | 4 | 194 | 293 | 252 | 356 | 1.44e-14 | 73.2 |
| Msa0465170 | MtrunA17_Chr3g0138371 | 50.000 | 80 | 36 | 2 | 218 | 293 | 309 | 388 | 3.28e-14 | 72.4 |
| Msa0465170 | MtrunA17_Chr4g0052151 | 45.238 | 84 | 37 | 3 | 216 | 294 | 10 | 89 | 1.40e-13 | 65.5 |
| Msa0465170 | MtrunA17_Chr3g0136291 | 46.341 | 82 | 36 | 3 | 217 | 294 | 253 | 330 | 1.47e-12 | 67.0 |
| Msa0465170 | MtrunA17_Chr7g0235821 | 43.590 | 78 | 40 | 2 | 221 | 294 | 297 | 374 | 6.18e-11 | 62.4 |
| Msa0465170 | MtrunA17_Chr3g0086041 | 39.506 | 81 | 44 | 2 | 209 | 288 | 307 | 383 | 7.93e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAGTCTTATTTCTTGTTC+TGG | 0.149527 | 3_3:-65522485 | Msa0465170:intron |
| TGTTTACGGGAGATAGAAAA+TGG | 0.225371 | 3_3:-65522446 | Msa0465170:CDS |
| AGGCATTCTGGGACAATCTT+TGG | 0.231457 | 3_3:+65524171 | None:intergenic |
| AGCTGAGATGAAAGGCATTC+TGG | 0.236838 | 3_3:+65524159 | None:intergenic |
| AGGCATTCCGGAACAATCTT+TGG | 0.251117 | 3_3:+65522380 | None:intergenic |
| GTGCTTGGCATTTAAATCTA+TGG | 0.252596 | 3_3:+65522235 | None:intergenic |
| CTTGGCCTCTTATCAGAGTC+TGG | 0.279298 | 3_3:+65524935 | None:intergenic |
| AATTTACAGGAGATAGAAAA+TGG | 0.279856 | 3_3:-65524234 | Msa0465170:intron |
| GGAAATTTACTTATTGTTTA+CGG | 0.306317 | 3_3:-65522460 | Msa0465170:CDS |
| TAAGTCTTATTTCTTGTTCT+GGG | 0.310418 | 3_3:-65522484 | Msa0465170:intron |
| ACGAGCATGAATCCTTCTTT+TGG | 0.325573 | 3_3:+65523062 | None:intergenic |
| ACGAGCATGAATCCTTCTTT+TGG | 0.325573 | 3_3:+65523340 | None:intergenic |
| CATTTGTCTGTCATCGTCAT+TGG | 0.363360 | 3_3:+65523231 | None:intergenic |
| GAAATTTACTTATTGTTTAC+GGG | 0.368137 | 3_3:-65522459 | Msa0465170:CDS |
| AGCTGAGATGAAAGGCATTC+CGG | 0.378666 | 3_3:+65522368 | None:intergenic |
| GGCATTCTGGGACAATCTTT+GGG | 0.382615 | 3_3:+65524172 | None:intergenic |
| GAAATGATGATGAGGTCATT+TGG | 0.386282 | 3_3:-65524200 | Msa0465170:CDS |
| GTTGAAAGTTGGGACTTTGA+TGG | 0.397309 | 3_3:-65523041 | Msa0465170:CDS |
| GTTGAAAGTTGGGACTTTGA+TGG | 0.397309 | 3_3:-65523319 | Msa0465170:CDS |
| GGCATTCCGGAACAATCTTT+GGG | 0.405579 | 3_3:+65522381 | None:intergenic |
| ATCTTGGTTATGTTTACAAT+GGG | 0.409646 | 3_3:-65523271 | Msa0465170:CDS |
| TCCAATGGGTGGCAGTCCAC+CGG | 0.418568 | 3_3:-65524832 | Msa0465170:CDS |
| ATGATGATGATGAGGACATC+TGG | 0.420587 | 3_3:-65522409 | Msa0465170:CDS |
| ATTCATGCTCGTTGAAAGTT+GGG | 0.421275 | 3_3:-65523051 | Msa0465170:CDS |
| ATTCATGCTCGTTGAAAGTT+GGG | 0.421275 | 3_3:-65523329 | Msa0465170:CDS |
| ATATGATTCCAGCCGTATCT+TGG | 0.423244 | 3_3:-65523009 | Msa0465170:CDS |
| ATATGATTCCAGCCGTATCT+TGG | 0.423244 | 3_3:-65523287 | Msa0465170:CDS |
| GCTGAGATGAAAGGCATTCT+GGG | 0.427295 | 3_3:+65524160 | None:intergenic |
| CATCGTCATTGGAAAACAAC+TGG | 0.430054 | 3_3:+65523242 | None:intergenic |
| GCCAATGTTGTACACATAGA+AGG | 0.432871 | 3_3:+65524862 | None:intergenic |
| GATTCATGCTCGTTGAAAGT+TGG | 0.442365 | 3_3:-65523052 | Msa0465170:CDS |
| GATTCATGCTCGTTGAAAGT+TGG | 0.442365 | 3_3:-65523330 | Msa0465170:CDS |
| AAATGATGATGAGGTCATTT+GGG | 0.443371 | 3_3:-65524199 | Msa0465170:CDS |
| TGCTTGTTTAAGAATTATAG+AGG | 0.448930 | 3_3:-65522338 | Msa0465170:CDS |
| TGCTTGTTTAAGAATTATAG+AGG | 0.448930 | 3_3:-65524129 | Msa0465170:CDS |
| CTAGCTGCATCTCTCACTCT+TGG | 0.450711 | 3_3:+65524917 | None:intergenic |
| ATAGAAAATGGGACAGAGAA+TGG | 0.455331 | 3_3:-65524222 | Msa0465170:CDS |
| GGAGGACCCAAAGATTGTTC+CGG | 0.462628 | 3_3:-65522387 | Msa0465170:CDS |
| TATCTTGGTTATGTTTACAA+TGG | 0.472295 | 3_3:-65523272 | Msa0465170:CDS |
| AATATAAGTTTACATCCCCT+TGG | 0.474499 | 3_3:+65522185 | None:intergenic |
| ATAGAAAATGGGATAGAGAA+TGG | 0.474639 | 3_3:-65522434 | Msa0465170:CDS |
| CATTGGCTCATGCGTCCAAT+GGG | 0.477885 | 3_3:-65524846 | Msa0465170:CDS |
| GAGATAATTTCTGTAACATC+TGG | 0.480168 | 3_3:+65522213 | None:intergenic |
| CCCGGTGGACTGCCACCCAT+TGG | 0.482816 | 3_3:+65524831 | None:intergenic |
| TGACGATGACAGACAAATGT+TGG | 0.495059 | 3_3:-65523227 | Msa0465170:CDS |
| TTCAACTACCAGCCAAAAGA+AGG | 0.504170 | 3_3:-65523074 | Msa0465170:intron |
| TTCAACTACCAGCCAAAAGA+AGG | 0.504170 | 3_3:-65523352 | Msa0465170:intron |
| TGCACCCAGACTCTGATAAG+AGG | 0.509832 | 3_3:-65524940 | Msa0465170:CDS |
| TTTCTGTAACATCTGGTGCT+TGG | 0.511968 | 3_3:+65522220 | None:intergenic |
| AGAAATTATCTCTGTGTCCA+AGG | 0.516537 | 3_3:-65522202 | Msa0465170:CDS |
| GTTTACGGGAGATAGAAAAT+GGG | 0.526687 | 3_3:-65522445 | Msa0465170:CDS |
| TTGGCCTCTTATCAGAGTCT+GGG | 0.528966 | 3_3:+65524936 | None:intergenic |
| GTCTTATTTCTTGTTCTGGG+TGG | 0.530220 | 3_3:-65522481 | Msa0465170:CDS |
| ACATTGGCTCATGCGTCCAA+TGG | 0.533033 | 3_3:-65524847 | Msa0465170:CDS |
| GACGATGACAGACAAATGTT+GGG | 0.533955 | 3_3:-65523226 | Msa0465170:CDS |
| AAACATAACCAAGATACGGC+TGG | 0.541067 | 3_3:+65523001 | None:intergenic |
| GAAATTATCTCTGTGTCCAA+GGG | 0.544783 | 3_3:-65522201 | Msa0465170:CDS |
| CCAATGGGTGGCAGTCCACC+GGG | 0.551903 | 3_3:-65524831 | Msa0465170:intron |
| ATTTACAGGAGATAGAAAAT+GGG | 0.554411 | 3_3:-65524233 | Msa0465170:intron |
| TCATTGGAAAACAACTGGAC+TGG | 0.554772 | 3_3:+65523247 | None:intergenic |
| AAACATAACCAAGATACGGC+TGG | 0.557490 | 3_3:+65523279 | None:intergenic |
| ATGGAGAGGATGCTCATGGT+GGG | 0.559895 | 3_3:-65524974 | Msa0465170:CDS |
| TTGTAAACATAACCAAGATA+CGG | 0.567134 | 3_3:+65523275 | None:intergenic |
| CAAGAGTGAGAGATGCAGCT+AGG | 0.568967 | 3_3:-65524916 | Msa0465170:CDS |
| TTATAAACATAACCAAGATA+CGG | 0.577507 | 3_3:+65522997 | None:intergenic |
| AGTTGGGACTTTGATGGTAA+CGG | 0.578740 | 3_3:-65523035 | Msa0465170:CDS |
| AGTTGGGACTTTGATGGTAA+CGG | 0.578740 | 3_3:-65523313 | Msa0465170:CDS |
| TCCTTCTATGTGTACAACAT+TGG | 0.588400 | 3_3:-65524863 | Msa0465170:CDS |
| TGGCTCATGCGTCCAATGGG+TGG | 0.590413 | 3_3:-65524843 | Msa0465170:CDS |
| TGATGATGATGAGGACATCT+GGG | 0.601472 | 3_3:-65522408 | Msa0465170:CDS |
| ACAAATGTTGGGTCATGCGT+CGG | 0.611868 | 3_3:-65523215 | Msa0465170:intron |
| AGAGAATGGAAATGATGATG+AGG | 0.624314 | 3_3:-65524208 | Msa0465170:CDS |
| AGAGATGGAGAGGATGCTCA+TGG | 0.633435 | 3_3:-65524978 | None:intergenic |
| TTGACGCACTAGAGATGGAG+AGG | 0.638526 | 3_3:-65524988 | None:intergenic |
| GATGGAGAGGATGCTCATGG+TGG | 0.643914 | 3_3:-65524975 | Msa0465170:CDS |
| GAATGGAAATGATGATGATG+AGG | 0.647441 | 3_3:-65522417 | Msa0465170:CDS |
| TGATGATGAGGTCATTTGGG+AGG | 0.652261 | 3_3:-65524196 | Msa0465170:CDS |
| TGGAGAGGATGCTCATGGTG+GGG | 0.672694 | 3_3:-65524973 | Msa0465170:CDS |
| AAATTATCTCTGTGTCCAAG+GGG | 0.678004 | 3_3:-65522200 | Msa0465170:CDS |
| TGATGATGAGGACATCTGGG+AGG | 0.799396 | 3_3:-65522405 | Msa0465170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAGTAATTATATATATAT+GGG | + | chr3_3:65522399-65522418 | None:intergenic | 10.0% |
| !! | CAAGAGTAATTATATATATA+TGG | + | chr3_3:65522400-65522419 | None:intergenic | 15.0% |
| !!! | GGTTTATTTTTCAAAAAAAA+TGG | - | chr3_3:65522605-65522624 | Msa0465170:intron | 15.0% |
| !! | CAACTTAAATAAAAAACAAT+CGG | + | chr3_3:65523404-65523423 | None:intergenic | 15.0% |
| !! | AATATTTAATTAACAACTAC+TGG | + | chr3_3:65523446-65523465 | None:intergenic | 15.0% |
| !! | AATTATATTACTCTGTATTT+CGG | - | chr3_3:65524240-65524259 | Msa0465170:intron | 15.0% |
| !! | AAAATTACCTAATTATCTAT+TGG | + | chr3_3:65524414-65524433 | None:intergenic | 15.0% |
| !! | TTTGAAGAAATTCAATAATT+AGG | - | chr3_3:65524433-65524452 | Msa0465170:intron | 15.0% |
| !!! | ATTAATGTAACTTGTGATAA+TGG | + | chr3_3:65522557-65522576 | None:intergenic | 20.0% |
| !!! | TCAACATTTTATCATTAATG+AGG | - | chr3_3:65522820-65522839 | Msa0465170:intron | 20.0% |
| !! | CACATATAATTTGATTGATT+TGG | - | chr3_3:65522846-65522865 | Msa0465170:intron | 20.0% |
| !!! | TGATTTGGTGATATTTATTT+TGG | - | chr3_3:65522861-65522880 | Msa0465170:intron | 20.0% |
| !! | AGATGTTACAAAAATTATCT+CGG | - | chr3_3:65523153-65523172 | Msa0465170:intron | 20.0% |
| !! | AACTTATATTTGAATGATGA+TGG | - | chr3_3:65523192-65523211 | Msa0465170:intron | 20.0% |
| !! | ACTTATATTTGAATGATGAT+GGG | - | chr3_3:65523193-65523212 | Msa0465170:intron | 20.0% |
| !!! | GTTTTTTATTTAAGTTGTCT+CGG | - | chr3_3:65523407-65523426 | Msa0465170:intron | 20.0% |
| !! | TTATAAACATAACCAAGATA+CGG | + | chr3_3:65524158-65524177 | None:intergenic | 20.0% |
| !! | TATCTTGGTTATGTTTATAA+TGG | - | chr3_3:65524158-65524177 | Msa0465170:CDS | 20.0% |
| !! | ATCTTGGTTATGTTTATAAT+GGG | - | chr3_3:65524159-65524178 | Msa0465170:CDS | 20.0% |
| !!! | AAAAAAAGTTTTCAGCTTTA+TGG | + | chr3_3:65524215-65524234 | None:intergenic | 20.0% |
| !!! | ATAAAGCTGAAAACTTTTTT+TGG | - | chr3_3:65524214-65524233 | Msa0465170:CDS | 20.0% |
| !! | AATTAGACCAATAGATAATT+AGG | - | chr3_3:65524404-65524423 | Msa0465170:intron | 20.0% |
| !! | AGTTAAACACAATAAATATG+AGG | + | chr3_3:65524632-65524651 | None:intergenic | 20.0% |
| !! | GGAAATTTACTTATTGTTTA+CGG | - | chr3_3:65524692-65524711 | Msa0465170:intron | 20.0% |
| !! | GAAATTTACTTATTGTTTAC+GGG | - | chr3_3:65524693-65524712 | Msa0465170:intron | 20.0% |
| !!! | ATCATAATGTTAGCTTGTTT+AGG | - | chr3_3:65522584-65522603 | Msa0465170:intron | 25.0% |
| !! | TGATGTTGAAATTGAACTTT+TGG | - | chr3_3:65522651-65522670 | Msa0465170:intron | 25.0% |
| ! | ATGATAAAATGTTGAAGCTT+TGG | + | chr3_3:65522815-65522834 | None:intergenic | 25.0% |
| !!! | TTTGGTGATATTTATTTTGG+TGG | - | chr3_3:65522864-65522883 | Msa0465170:intron | 25.0% |
| !!! | TTGGTGATATTTATTTTGGT+GGG | - | chr3_3:65522865-65522884 | Msa0465170:intron | 25.0% |
| !!! | CTCTTAACTTTTGTTTTTGT+TGG | - | chr3_3:65522894-65522913 | Msa0465170:intron | 25.0% |
| !!! | TGTTTTTGTTGGAAATTTAC+AGG | - | chr3_3:65522905-65522924 | Msa0465170:intron | 25.0% |
| ! | AATTTACAGGAGATAGAAAA+TGG | - | chr3_3:65522918-65522937 | Msa0465170:intron | 25.0% |
| ! | ATTTACAGGAGATAGAAAAT+GGG | - | chr3_3:65522919-65522938 | Msa0465170:intron | 25.0% |
| ! | TGCTTGTTTAAGAATTATAG+AGG | - | chr3_3:65523023-65523042 | Msa0465170:CDS | 25.0% |
| !! | GAGATAATTTTTGTAACATC+TGG | + | chr3_3:65523154-65523173 | None:intergenic | 25.0% |
| !! | CTTATATTTGAATGATGATG+GGG | - | chr3_3:65523194-65523213 | Msa0465170:intron | 25.0% |
| !!! | TTATATTTGAATGATGATGG+GGG | - | chr3_3:65523195-65523214 | Msa0465170:intron | 25.0% |
| !!! | ATGGATTTTAATTGCATGAA+AGG | + | chr3_3:65523345-65523364 | None:intergenic | 25.0% |
| ! | AAAAAACAATCGGTAAGAAA+AGG | + | chr3_3:65523394-65523413 | None:intergenic | 25.0% |
| !!! | GTACTTTATTTTGGGTATTT+CGG | - | chr3_3:65523536-65523555 | Msa0465170:intron | 25.0% |
| ! | TTTGTAAGCATCAGTTAAAA+TGG | - | chr3_3:65523715-65523734 | Msa0465170:intron | 25.0% |
| ! | TTGTAAACATAACCAAGATA+CGG | + | chr3_3:65523880-65523899 | None:intergenic | 25.0% |
| ! | TATCTTGGTTATGTTTACAA+TGG | - | chr3_3:65523880-65523899 | Msa0465170:intron | 25.0% |
| ! | ATCTTGGTTATGTTTACAAT+GGG | - | chr3_3:65523881-65523900 | Msa0465170:intron | 25.0% |
| !! | TTTTTCCTTGAAAAAACTTC+TGG | + | chr3_3:65524280-65524299 | None:intergenic | 25.0% |
| ! | ATGATAAAATGTTGAAGCTT+CGG | + | chr3_3:65522815-65522834 | None:intergenic | 25.0% |
| ! | ATAAGACTTAAGATATGTAG+AGG | + | chr3_3:65524658-65524677 | None:intergenic | 25.0% |
| !!! | TTAAGTCTTATTTCTTGTTC+TGG | - | chr3_3:65524667-65524686 | Msa0465170:intron | 25.0% |
| !!! | TAAGTCTTATTTCTTGTTCT+GGG | - | chr3_3:65524668-65524687 | Msa0465170:intron | 25.0% |
| ! | TGCTTGTTTAAGAATTATAG+AGG | - | chr3_3:65523023-65523042 | Msa0465170:CDS | 25.0% |
| ! | ATTGAAATTGACTTTGCTGT+CGG | + | chr3_3:65522469-65522488 | None:intergenic | 30.0% |
| AAAATGACTTTGGTGAGAAT+TGG | + | chr3_3:65522509-65522528 | None:intergenic | 30.0% | |
| GCAAATCATGAAAATGACTT+TGG | + | chr3_3:65522519-65522538 | None:intergenic | 30.0% | |
| !! | AATGTAACTTGTGATAATGG+CGG | + | chr3_3:65522554-65522573 | None:intergenic | 30.0% |
| !!! | ACTGATTTTTAAGTACAGTG+TGG | - | chr3_3:65522733-65522752 | Msa0465170:intron | 30.0% |
| ! | AAATGATGATGAGGTCATTT+GGG | - | chr3_3:65522953-65522972 | Msa0465170:intron | 30.0% |
| AAAAATTATCTCGGTTTCCA+AGG | - | chr3_3:65523162-65523181 | Msa0465170:intron | 30.0% | |
| AAAATTATCTCGGTTTCCAA+GGG | - | chr3_3:65523163-65523182 | Msa0465170:intron | 30.0% | |
| AATATAAGTTTACATCCCCT+TGG | + | chr3_3:65523182-65523201 | None:intergenic | 30.0% | |
| !! | TATATTTGAATGATGATGGG+GGG | - | chr3_3:65523196-65523215 | Msa0465170:intron | 30.0% |
| !!! | TATATGTGTAGCTTTTTTCC+TGG | - | chr3_3:65523239-65523258 | Msa0465170:CDS | 30.0% |
| TTGAAAATGTATACGACATG+AGG | + | chr3_3:65523312-65523331 | None:intergenic | 30.0% | |
| AAGGAAAAGTAAAAGTTGAG+AGG | + | chr3_3:65523375-65523394 | None:intergenic | 30.0% | |
| ATCATGTGAGATTTCAATGA+AGG | + | chr3_3:65524002-65524021 | None:intergenic | 30.0% | |
| !!! | ATTCTCCAGAAGTTTTTTCA+AGG | - | chr3_3:65524272-65524291 | Msa0465170:intron | 30.0% |
| ! | ATTTCCACTGAAGATACTTT+TGG | + | chr3_3:65524320-65524339 | None:intergenic | 30.0% |
| AGTACCCATGCTTTATATAA+GGG | + | chr3_3:65524466-65524485 | None:intergenic | 30.0% | |
| CTAACTTAGAGCATAAAAGT+TGG | - | chr3_3:65524488-65524507 | Msa0465170:intron | 30.0% | |
| TGATAAAATGTTGAAGCTTC+GGG | + | chr3_3:65524576-65524595 | None:intergenic | 30.0% | |
| ! | TCAACATTTTATCATTCACG+AGG | - | chr3_3:65524582-65524601 | Msa0465170:intron | 30.0% |
| ATAGAAAATGGGATAGAGAA+TGG | - | chr3_3:65524718-65524737 | Msa0465170:intron | 30.0% | |
| GAGATAATTTCTGTAACATC+TGG | + | chr3_3:65524942-65524961 | None:intergenic | 30.0% | |
| AATATAAGTTTACATCCCCT+TGG | + | chr3_3:65523182-65523201 | None:intergenic | 30.0% | |
| TCCTTCTATGTGTACAACAT+TGG | - | chr3_3:65522289-65522308 | Msa0465170:CDS | 35.0% | |
| GTCTTCTTGGATAGTTATAG+CGG | - | chr3_3:65522373-65522392 | Msa0465170:CDS | 35.0% | |
| TACTCTTGACACATCGTATA+AGG | - | chr3_3:65522412-65522431 | Msa0465170:CDS | 35.0% | |
| ! | TTGAAATTGACTTTGCTGTC+GGG | + | chr3_3:65522468-65522487 | None:intergenic | 35.0% |
| !! | ATGTAACTTGTGATAATGGC+GGG | + | chr3_3:65522553-65522572 | None:intergenic | 35.0% |
| ! | AAAATGGAGTAGTTTGCATG+TGG | - | chr3_3:65522621-65522640 | Msa0465170:intron | 35.0% |
| ATAGAAAATGGGACAGAGAA+TGG | - | chr3_3:65522930-65522949 | Msa0465170:intron | 35.0% | |
| ! | AGAGAATGGAAATGATGATG+AGG | - | chr3_3:65522944-65522963 | Msa0465170:intron | 35.0% |
| ! | GAAATGATGATGAGGTCATT+TGG | - | chr3_3:65522952-65522971 | Msa0465170:intron | 35.0% |
| !!! | AAGTTTTGAGCTGAGATGAA+AGG | + | chr3_3:65523004-65523023 | None:intergenic | 35.0% |
| GTACTTCGCGTTTAAATCTA+TGG | + | chr3_3:65523132-65523151 | None:intergenic | 35.0% | |
| AAATTATCTCGGTTTCCAAG+GGG | - | chr3_3:65523164-65523183 | Msa0465170:intron | 35.0% | |
| TACGACATGAGGACAAAATA+AGG | + | chr3_3:65523301-65523320 | None:intergenic | 35.0% | |
| AAAGTTGAGAGGAACTAGAA+TGG | + | chr3_3:65523364-65523383 | None:intergenic | 35.0% | |
| TGATATGATGCATAGCTACA+TGG | - | chr3_3:65523465-65523484 | Msa0465170:intron | 35.0% | |
| !!! | TCCCTGGTGTACTTTATTTT+GGG | - | chr3_3:65523528-65523547 | Msa0465170:intron | 35.0% |
| ACCCAAAATAAAGTACACCA+GGG | + | chr3_3:65523532-65523551 | None:intergenic | 35.0% | |
| TACCCAAAATAAAGTACACC+AGG | + | chr3_3:65523533-65523552 | None:intergenic | 35.0% | |
| AGCGAGACTTCTTAATTCTA+CGG | + | chr3_3:65523601-65523620 | None:intergenic | 35.0% | |
| ! | TTAAAATGGCCATGTGGTTT+TGG | - | chr3_3:65523729-65523748 | Msa0465170:intron | 35.0% |
| ATTCATGCTCGTTGAAAGTT+GGG | - | chr3_3:65523823-65523842 | Msa0465170:intron | 35.0% | |
| TCAGAATCTGAAAACTGCAT+AGG | - | chr3_3:65523960-65523979 | Msa0465170:intron | 35.0% | |
| ATTCATGCTCGTTGAAAGTT+GGG | - | chr3_3:65523823-65523842 | Msa0465170:intron | 35.0% | |
| !! | AGTCCAGTTGTTTTCTATTG+AGG | - | chr3_3:65524185-65524204 | Msa0465170:CDS | 35.0% |
| !! | GTCCAGTTGTTTTCTATTGA+GGG | - | chr3_3:65524186-65524205 | Msa0465170:CDS | 35.0% |
| !! | TTCTCCAAAAGTATCTTCAG+TGG | - | chr3_3:65524313-65524332 | Msa0465170:intron | 35.0% |
| TACCCATGCTTTATATAAGG+GGG | + | chr3_3:65524464-65524483 | None:intergenic | 35.0% | |
| GTACCCATGCTTTATATAAG+GGG | + | chr3_3:65524465-65524484 | None:intergenic | 35.0% | |
| GAGTACCCATGCTTTATATA+AGG | + | chr3_3:65524467-65524486 | None:intergenic | 35.0% | |
| ! | ATAAAAGTTGGCCTAAGAAG+TGG | - | chr3_3:65524500-65524519 | Msa0465170:intron | 35.0% |
| TGTTTACGGGAGATAGAAAA+TGG | - | chr3_3:65524706-65524725 | Msa0465170:intron | 35.0% | |
| GTTTACGGGAGATAGAAAAT+GGG | - | chr3_3:65524707-65524726 | Msa0465170:intron | 35.0% | |
| ! | GAATGGAAATGATGATGATG+AGG | - | chr3_3:65524735-65524754 | Msa0465170:intron | 35.0% |
| !!! | AAGTTTTGAGCTGAGATGAA+AGG | + | chr3_3:65523004-65523023 | None:intergenic | 35.0% |
| GTGCTTGGCATTTAAATCTA+TGG | + | chr3_3:65524920-65524939 | None:intergenic | 35.0% | |
| AGAAATTATCTCTGTGTCCA+AGG | - | chr3_3:65524950-65524969 | Msa0465170:CDS | 35.0% | |
| GAAATTATCTCTGTGTCCAA+GGG | - | chr3_3:65524951-65524970 | Msa0465170:CDS | 35.0% | |
| AAATTATCTCTGTGTCCAAG+GGG | - | chr3_3:65524952-65524971 | Msa0465170:CDS | 35.0% | |
| GCCAATGTTGTACACATAGA+AGG | + | chr3_3:65522293-65522312 | None:intergenic | 40.0% | |
| AGAAGACACTCAAAACAGGA+AGG | + | chr3_3:65522360-65522379 | None:intergenic | 40.0% | |
| !! | TCCTGTTTTGAGTGTCTTCT+TGG | - | chr3_3:65522360-65522379 | Msa0465170:CDS | 40.0% |
| TCCAAGAAGACACTCAAAAC+AGG | + | chr3_3:65522364-65522383 | None:intergenic | 40.0% | |
| !! | GGGGTATTTACGTCTTTTAC+TGG | + | chr3_3:65522448-65522467 | None:intergenic | 40.0% |
| ! | TGAAATTGACTTTGCTGTCG+GGG | + | chr3_3:65522467-65522486 | None:intergenic | 40.0% |
| !! | TGTGATAATGGCGGGTTAAT+TGG | + | chr3_3:65522545-65522564 | None:intergenic | 40.0% |
| ! | GAGTAGTTTGCATGTGGTTA+GGG | - | chr3_3:65522627-65522646 | Msa0465170:intron | 40.0% |
| CGCGTTTAAATCTATGGAAC+AGG | + | chr3_3:65523126-65523145 | None:intergenic | 40.0% | |
| !! | TTTTCCTGGATTAGAGTCGA+TGG | - | chr3_3:65523253-65523272 | Msa0465170:CDS | 40.0% |
| TAGAGTCGATGGTGTTTCAA+AGG | - | chr3_3:65523264-65523283 | Msa0465170:CDS | 40.0% | |
| CTTGTTTGTAAGTTTGTCCC+TGG | - | chr3_3:65523512-65523531 | Msa0465170:intron | 40.0% | |
| !! | GTCCCTGGTGTACTTTATTT+TGG | - | chr3_3:65523527-65523546 | Msa0465170:intron | 40.0% |
| ! | CAGACTAGATTTTACTCGCT+CGG | - | chr3_3:65523650-65523669 | Msa0465170:intron | 40.0% |
| CATCAGTTAAAATGGCCATG+TGG | - | chr3_3:65523723-65523742 | Msa0465170:intron | 40.0% | |
| CAAGAACAACCAAAACCACA+TGG | + | chr3_3:65523741-65523760 | None:intergenic | 40.0% | |
| !!! | TGTGGTTTTGGTTGTTCTTG+AGG | - | chr3_3:65523741-65523760 | Msa0465170:intron | 40.0% |
| TTAGAGCATACTGACGTTGA+AGG | + | chr3_3:65523774-65523793 | None:intergenic | 40.0% | |
| TTCAACTACCAGCCAAAAGA+AGG | - | chr3_3:65523800-65523819 | Msa0465170:intron | 40.0% | |
| ! | ACGAGCATGAATCCTTCTTT+TGG | + | chr3_3:65523815-65523834 | None:intergenic | 40.0% |
| GATTCATGCTCGTTGAAAGT+TGG | - | chr3_3:65523822-65523841 | Msa0465170:intron | 40.0% | |
| GTTGAAAGTTGGGACTTTGA+TGG | - | chr3_3:65523833-65523852 | Msa0465170:intron | 40.0% | |
| ! | AGTTGGGACTTTGATGGTAA+CGG | - | chr3_3:65523839-65523858 | Msa0465170:intron | 40.0% |
| ATATGATTCCAGCCGTATCT+TGG | - | chr3_3:65523865-65523884 | Msa0465170:intron | 40.0% | |
| AAACATAACCAAGATACGGC+TGG | + | chr3_3:65523876-65523895 | None:intergenic | 40.0% | |
| TCATTGGAAAACAACTGGAC+TGG | + | chr3_3:65523908-65523927 | None:intergenic | 40.0% | |
| CATCGTCATTGGAAAACAAC+TGG | + | chr3_3:65523913-65523932 | None:intergenic | 40.0% | |
| CATTTGTCTGTCATCGTCAT+TGG | + | chr3_3:65523924-65523943 | None:intergenic | 40.0% | |
| TGACGATGACAGACAAATGT+TGG | - | chr3_3:65523925-65523944 | Msa0465170:intron | 40.0% | |
| GACGATGACAGACAAATGTT+GGG | - | chr3_3:65523926-65523945 | Msa0465170:intron | 40.0% | |
| ! | GTAAGTTGACTTTCAAGCGT+CGG | - | chr3_3:65524039-65524058 | Msa0465170:intron | 40.0% |
| TTCAACTACCAGCCAAAAGA+AGG | - | chr3_3:65523800-65523819 | Msa0465170:intron | 40.0% | |
| ! | ACGAGCATGAATCCTTCTTT+TGG | + | chr3_3:65523815-65523834 | None:intergenic | 40.0% |
| GATTCATGCTCGTTGAAAGT+TGG | - | chr3_3:65523822-65523841 | Msa0465170:intron | 40.0% | |
| GTTGAAAGTTGGGACTTTGA+TGG | - | chr3_3:65523833-65523852 | Msa0465170:intron | 40.0% | |
| ! | AGTTGGGACTTTGATGGTAA+CGG | - | chr3_3:65523839-65523858 | Msa0465170:intron | 40.0% |
| ATATGATTCCAGCCGTATCT+TGG | - | chr3_3:65523865-65523884 | Msa0465170:intron | 40.0% | |
| AAACATAACCAAGATACGGC+TGG | + | chr3_3:65523876-65523895 | None:intergenic | 40.0% | |
| CTCCCTCAATAGAAAACAAC+TGG | + | chr3_3:65524191-65524210 | None:intergenic | 40.0% | |
| TGTCCCCCTTATATAAAGCA+TGG | - | chr3_3:65524458-65524477 | Msa0465170:intron | 40.0% | |
| GTCCCCCTTATATAAAGCAT+GGG | - | chr3_3:65524459-65524478 | Msa0465170:intron | 40.0% | |
| !! | GTCTTATTTCTTGTTCTGGG+TGG | - | chr3_3:65524671-65524690 | Msa0465170:intron | 40.0% |
| ! | ATGATGATGATGAGGACATC+TGG | - | chr3_3:65524743-65524762 | Msa0465170:intron | 40.0% |
| ! | TGATGATGATGAGGACATCT+GGG | - | chr3_3:65524744-65524763 | Msa0465170:intron | 40.0% |
| TTTCTGTAACATCTGGTGCT+TGG | + | chr3_3:65524935-65524954 | None:intergenic | 40.0% | |
| TTGGCCTCTTATCAGAGTCT+GGG | + | chr3_3:65522219-65522238 | None:intergenic | 45.0% | |
| GAAGGATAAACAAACCCACC+CGG | + | chr3_3:65522342-65522361 | None:intergenic | 45.0% | |
| ! | GGAGTAGTTTGCATGTGGTT+AGG | - | chr3_3:65522626-65522645 | Msa0465170:intron | 45.0% |
| ! | TGATGATGAGGTCATTTGGG+AGG | - | chr3_3:65522956-65522975 | Msa0465170:intron | 45.0% |
| !! | GGCATTCTGGGACAATCTTT+GGG | + | chr3_3:65522983-65523002 | None:intergenic | 45.0% |
| !! | AGGCATTCTGGGACAATCTT+TGG | + | chr3_3:65522984-65523003 | None:intergenic | 45.0% |
| !! | GCTGAGATGAAAGGCATTCT+GGG | + | chr3_3:65522995-65523014 | None:intergenic | 45.0% |
| !! | AGCTGAGATGAAAGGCATTC+TGG | + | chr3_3:65522996-65523015 | None:intergenic | 45.0% |
| !! | AACACCATCGACTCTAATCC+AGG | + | chr3_3:65523260-65523279 | None:intergenic | 45.0% |
| ! | GCATGAATCCTTCTTTTGGC+TGG | + | chr3_3:65523811-65523830 | None:intergenic | 45.0% |
| ACAAATGTTGGGTCATGCGT+CGG | - | chr3_3:65523937-65523956 | Msa0465170:intron | 45.0% | |
| ! | GCATGAATCCTTCTTTTGGC+TGG | + | chr3_3:65523811-65523830 | None:intergenic | 45.0% |
| AGCATCCACGTTCACTTCTT+AGG | + | chr3_3:65524535-65524554 | None:intergenic | 45.0% | |
| GGCATTCCGGAACAATCTTT+GGG | + | chr3_3:65524774-65524793 | None:intergenic | 45.0% | |
| AGGCATTCCGGAACAATCTT+TGG | + | chr3_3:65524775-65524794 | None:intergenic | 45.0% | |
| !! | AGCTGAGATGAAAGGCATTC+CGG | + | chr3_3:65522996-65523015 | None:intergenic | 45.0% |
| ATGGAGAGGATGCTCATGGT+GGG | - | chr3_3:65522178-65522197 | Msa0465170:CDS | 50.0% | |
| TGCACCCAGACTCTGATAAG+AGG | - | chr3_3:65522212-65522231 | Msa0465170:CDS | 50.0% | |
| CTTGGCCTCTTATCAGAGTC+TGG | + | chr3_3:65522220-65522239 | None:intergenic | 50.0% | |
| CTAGCTGCATCTCTCACTCT+TGG | + | chr3_3:65522238-65522257 | None:intergenic | 50.0% | |
| CAAGAGTGAGAGATGCAGCT+AGG | - | chr3_3:65522236-65522255 | Msa0465170:CDS | 50.0% | |
| !! | ACATTGGCTCATGCGTCCAA+TGG | - | chr3_3:65522305-65522324 | Msa0465170:CDS | 50.0% |
| !! | CATTGGCTCATGCGTCCAAT+GGG | - | chr3_3:65522306-65522325 | Msa0465170:CDS | 50.0% |
| !! | TTGAATGATGATGGGGGGCT+AGG | - | chr3_3:65523201-65523220 | Msa0465170:intron | 50.0% |
| AGCGTGAGAAAATGCCCTAG+TGG | - | chr3_3:65523561-65523580 | Msa0465170:intron | 50.0% | |
| ! | GAAAATGCCCTAGTGGACCA+CGG | - | chr3_3:65523568-65523587 | Msa0465170:intron | 50.0% |
| AATTCTACGGTTCTCAGCCG+TGG | + | chr3_3:65523588-65523607 | None:intergenic | 50.0% | |
| ! | GTTGGCCTAAGAAGTGAACG+TGG | - | chr3_3:65524527-65524546 | Msa0465170:intron | 50.0% |
| ! | TGATGATGAGGACATCTGGG+AGG | - | chr3_3:65524747-65524766 | Msa0465170:intron | 50.0% |
| GGAGGACCCAAAGATTGTTC+CGG | - | chr3_3:65524765-65524784 | Msa0465170:intron | 50.0% | |
| TGGAGAGGATGCTCATGGTG+GGG | - | chr3_3:65522179-65522198 | Msa0465170:CDS | 55.0% | |
| GGATAAACAAACCCACCCGG+TGG | + | chr3_3:65522339-65522358 | None:intergenic | 55.0% | |
| TTCTCAGCCGTGGTCCACTA+GGG | + | chr3_3:65523578-65523597 | None:intergenic | 55.0% | |
| GGCCTAAGAAGTGGACGTGT+TGG | - | chr3_3:65524509-65524528 | Msa0465170:intron | 55.0% | |
| GGCCAACACGTCCACTTCTT+AGG | + | chr3_3:65524514-65524533 | None:intergenic | 55.0% | |
| TGGCTCATGCGTCCAATGGG+TGG | - | chr3_3:65522309-65522328 | Msa0465170:CDS | 60.0% | |
| TCCAATGGGTGGCAGTCCAC+CGG | - | chr3_3:65522320-65522339 | Msa0465170:CDS | 60.0% | |
| GTTCTCAGCCGTGGTCCACT+AGG | + | chr3_3:65523579-65523598 | None:intergenic | 60.0% | |
| CCAATGGGTGGCAGTCCACC+GGG | - | chr3_3:65522321-65522340 | Msa0465170:CDS | 65.0% | |
| !! | CCCGGTGGACTGCCACCCAT+TGG | + | chr3_3:65522324-65522343 | None:intergenic | 70.0% |
| ATGGGTGGCAGTCCACCGGG+TGG | - | chr3_3:65522324-65522343 | Msa0465170:CDS | 70.0% | |
| TGGGTGGCAGTCCACCGGGT+GGG | - | chr3_3:65522325-65522344 | Msa0465170:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 65522178 | 65524996 | 65522178 | ID=Msa0465170;Name=Msa0465170 |
| chr3_3 | mRNA | 65522178 | 65524996 | 65522178 | ID=Msa0465170-mRNA-1;Parent=Msa0465170;Name=Msa0465170-mRNA-1;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.4|1|1|5|0|294 |
| chr3_3 | exon | 65524832 | 65524996 | 65524832 | ID=Msa0465170-mRNA-1:exon:14596;Parent=Msa0465170-mRNA-1 |
| chr3_3 | exon | 65524080 | 65524247 | 65524080 | ID=Msa0465170-mRNA-1:exon:14595;Parent=Msa0465170-mRNA-1 |
| chr3_3 | exon | 65523216 | 65523362 | 65523216 | ID=Msa0465170-mRNA-1:exon:14594;Parent=Msa0465170-mRNA-1 |
| chr3_3 | exon | 65523005 | 65523084 | 65523005 | ID=Msa0465170-mRNA-1:exon:14593;Parent=Msa0465170-mRNA-1 |
| chr3_3 | exon | 65522178 | 65522502 | 65522178 | ID=Msa0465170-mRNA-1:exon:14592;Parent=Msa0465170-mRNA-1 |
| chr3_3 | CDS | 65524832 | 65524996 | 65524832 | ID=Msa0465170-mRNA-1:cds;Parent=Msa0465170-mRNA-1 |
| chr3_3 | CDS | 65524080 | 65524247 | 65524080 | ID=Msa0465170-mRNA-1:cds;Parent=Msa0465170-mRNA-1 |
| chr3_3 | CDS | 65523216 | 65523362 | 65523216 | ID=Msa0465170-mRNA-1:cds;Parent=Msa0465170-mRNA-1 |
| chr3_3 | CDS | 65523005 | 65523084 | 65523005 | ID=Msa0465170-mRNA-1:cds;Parent=Msa0465170-mRNA-1 |
| chr3_3 | CDS | 65522178 | 65522502 | 65522178 | ID=Msa0465170-mRNA-1:cds;Parent=Msa0465170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
