AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466110 MtrunA17_Chr1g0169191 97.159 352 10 0 1 352 1 352 0.0 718
Msa0466110 MtrunA17_Chr3g0118821 96.809 282 9 0 37 318 60 341 0.0 569
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466110 AT3G58830.1 63.469 271 95 3 81 349 72 340 7.12e-118 345
Msa0466110 AT3G58830.2 63.469 271 95 3 81 349 77 345 7.22e-118 345
Msa0466110 AT3G58830.3 65.823 237 77 3 81 315 77 311 2.06e-105 313

Find 131 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTGTGGTTTCTGGTTTC+TGG 0.057163 3_3:+66673180 None:intergenic
CCCTTCACTGACATTGTTTA+TGG 0.078059 3_3:-66672265 Msa0466110:CDS
TTGATGTTGACTGTGGTTTC+TGG 0.127678 3_3:+66673173 None:intergenic
GGAATGGGTTTCTAACTATT+TGG 0.158847 3_3:-66672237 Msa0466110:CDS
ATATGGGGCAGTGACAATTT+TGG 0.203302 3_3:+66673006 None:intergenic
TCTACGTAGAAAGGGATTTA+AGG 0.208357 3_3:-66672947 Msa0466110:CDS
CAAACCTGCTTAACAATAAA+TGG 0.212685 3_3:+66672187 None:intergenic
GAAGAAATTGAAAAGCATTT+TGG 0.233420 3_3:-66672423 Msa0466110:CDS
CTTCCTCAATCGTGTGTGTT+TGG 0.234060 3_3:-66675321 Msa0466110:five_prime_UTR
TGCCCTCAAAGTTGATTCTT+TGG 0.244850 3_3:+66673061 None:intergenic
TTATATCAGGAACTGAAATA+TGG 0.269807 3_3:+66672989 None:intergenic
TTGCGTGATAATTGAGATTC+TGG 0.288376 3_3:-66675717 Msa0466110:five_prime_UTR
TGTTTATGCTTCATCGGATT+TGG 0.322780 3_3:-66675579 Msa0466110:five_prime_UTR
GAGATGGATAGATGGATAGA+TGG 0.328926 3_3:+66675351 None:intergenic
GGGAATGTGGTACGAGCAAC+TGG 0.332306 3_3:+66673443 None:intergenic
TTCCTCAATCGTGTGTGTTT+GGG 0.343936 3_3:-66675320 Msa0466110:five_prime_UTR
GAAAGTTGTAAATCAGAGTT+TGG 0.356510 3_3:-66672847 Msa0466110:CDS
TCGTTGGGCATGATGATGTC+TGG 0.366443 3_3:+66673422 None:intergenic
GCCTCCACTTGAGTCTTCAT+TGG 0.369973 3_3:-66672869 Msa0466110:CDS
AGAAGTATTTAATAAGGAAT+AGG 0.381243 3_3:+66673238 None:intergenic
CAGTCAATGTATCTTATATC+AGG 0.381565 3_3:+66672976 None:intergenic
TTTGTCGTTCTGATTTGAAT+TGG 0.389014 3_3:+66673263 None:intergenic
CTCTGTGTCTGAGGAAGACT+TGG 0.390918 3_3:+66673330 None:intergenic
CAAGTGAGAAGTATTTAATA+AGG 0.394930 3_3:+66673232 None:intergenic
TATATCAGGAACTGAAATAT+GGG 0.405912 3_3:+66672990 None:intergenic
GATAATACACATTACCAGTT+TGG 0.409220 3_3:+66671693 None:intergenic
TAATCTGTGTTCACTCAAAA+CGG 0.409941 3_3:-66671625 Msa0466110:three_prime_UTR
GCAGATGTGAAAGCGGCATT+TGG 0.416507 3_3:-66673084 Msa0466110:CDS
AGGAATCTTGAGAGTACAAT+TGG 0.419350 3_3:-66672653 Msa0466110:CDS
GAAGGAACGAGATGGATAGA+TGG 0.420720 3_3:+66675343 None:intergenic
GGGCATTCTATGTTCAACTA+TGG 0.421228 3_3:-66673043 Msa0466110:CDS
CTGACATTGTTTATGGCAAT+CGG 0.424991 3_3:-66672258 Msa0466110:CDS
AAGGGCTAGAAAGCAATTAC+AGG 0.425208 3_3:-66673299 Msa0466110:CDS
TAGGATCTGGCAATAGCTTC+TGG 0.429090 3_3:+66671839 None:intergenic
TTGTTTATGGCAATCGGAAT+GGG 0.438839 3_3:-66672252 Msa0466110:CDS
CTGATATAAGATACATTGAC+TGG 0.441013 3_3:-66672975 Msa0466110:CDS
TATGCTTCATCGGATTTGGT+CGG 0.444785 3_3:-66675575 Msa0466110:five_prime_UTR
ATTTCTTCAGCTGTGCCACC+TGG 0.452323 3_3:+66672438 None:intergenic
GGAGCCATTTATTGTTAAGC+AGG 0.454977 3_3:-66672191 Msa0466110:intron
AGAAGTTTCTCAGAGGGACT+TGG 0.459372 3_3:+66673358 None:intergenic
CTGGGCTGCTCTACGTAGAA+AGG 0.459911 3_3:-66672956 Msa0466110:CDS
GGCCAAAGAATCAACTTTGA+GGG 0.460017 3_3:-66673063 Msa0466110:CDS
TACGGCCGGGATTTATTGAA+TGG 0.460666 3_3:-66675407 Msa0466110:five_prime_UTR
CTACGTAGAAAGGGATTTAA+GGG 0.460767 3_3:-66672946 Msa0466110:CDS
CGTCAAACACCATTCACTTT+CGG 0.461685 3_3:-66675272 Msa0466110:intron
GATTTGGTCGGGCTGCGTGA+GGG 0.470896 3_3:-66675563 Msa0466110:intron
GGCTCCTCTGCAAGACTCAA+TGG 0.471686 3_3:+66672208 None:intergenic
ATGCTTCATCGGATTTGGTC+GGG 0.473805 3_3:-66675574 Msa0466110:five_prime_UTR
GTCCCTCTGAGAAACTTCTA+TGG 0.478928 3_3:-66673354 Msa0466110:CDS
AGACAGACAAAGGGAATTCA+AGG 0.479391 3_3:-66673148 Msa0466110:CDS
AGCTGTAGCAACATGTGGTC+AGG 0.481320 3_3:-66673525 Msa0466110:five_prime_UTR
GGATAGATGGATAGATGGGT+AGG 0.481454 3_3:+66675356 None:intergenic
TACCCTACTCTTTAACGCTC+TGG 0.487917 3_3:-66672891 Msa0466110:CDS
TGGCCAAAGAATCAACTTTG+AGG 0.489408 3_3:-66673064 Msa0466110:CDS
GTAAAGTACTGGTCTAGAAG+AGG 0.490645 3_3:-66671877 Msa0466110:CDS
GTCAAGTGTTTATGCTTCAT+CGG 0.492206 3_3:-66675585 Msa0466110:five_prime_UTR
TTGACACAATGTCTAGGATC+TGG 0.492519 3_3:+66671826 None:intergenic
AAACTACATTTGTAAAGTAC+TGG 0.493301 3_3:-66671888 Msa0466110:CDS
ATTGTTTATGGCAATCGGAA+TGG 0.494457 3_3:-66672253 Msa0466110:CDS
CCCAGAAAATTAGTATGCTA+TGG 0.495081 3_3:+66671773 None:intergenic
ATCGCACTTCAGTAACTTTG+AGG 0.496034 3_3:+66675380 None:intergenic
AGATGGATAGATGGATAGAT+GGG 0.500276 3_3:+66675352 None:intergenic
AATCTGTGTTCACTCAAAAC+GGG 0.500997 3_3:-66671624 Msa0466110:three_prime_UTR
GGCCAGAGCGTTAAAGAGTA+GGG 0.506103 3_3:+66672889 None:intergenic
GCTGTATTTAGTAACTCAGC+TGG 0.507393 3_3:-66672814 Msa0466110:intron
CGGTTGTGAGAGCTTTGCCA+TGG 0.513266 3_3:-66675681 Msa0466110:five_prime_UTR
GATGCATTCATGCGATCATA+CGG 0.513801 3_3:-66675425 Msa0466110:five_prime_UTR
CGGTTGTGAGAGCTTCATCA+TGG 0.527203 3_3:-66675612 Msa0466110:five_prime_UTR
TCAATCGTGTGTGTTTGGGT+TGG 0.528675 3_3:-66675316 Msa0466110:five_prime_UTR
TGACTCAACACTAACCTGTC+AGG 0.529657 3_3:+66674193 None:intergenic
CTATGGAGACAAGTCTATCA+AGG 0.534134 3_3:+66671790 None:intergenic
GAGAACTTACCGAAAGTGAA+TGG 0.534557 3_3:+66675263 None:intergenic
TGGGCTGCTCTACGTAGAAA+GGG 0.534826 3_3:-66672955 Msa0466110:CDS
GGATTTGGTCGGGCTGCGTG+AGG 0.538199 3_3:-66675564 Msa0466110:five_prime_UTR
CTCACAACCGCACGATTCAT+CGG 0.540430 3_3:+66675625 None:intergenic
TTACGCAGGTGATTGATACA+AGG 0.543357 3_3:-66674224 Msa0466110:intron
AGGGACTTGGCTATCTGCAT+TGG 0.544545 3_3:+66673371 None:intergenic
TTGAGATTCTGGGAAGGAGC+TGG 0.547448 3_3:-66675706 Msa0466110:five_prime_UTR
TTAATTAAGATTTGGTGATG+TGG 0.548430 3_3:-66675456 Msa0466110:five_prime_UTR
GACGCCGCAGCACTGTGTTG+TGG 0.548728 3_3:+66675291 None:intergenic
AGGCCAGAGCGTTAAAGAGT+AGG 0.550814 3_3:+66672888 None:intergenic
TTGTTGCAACTCTGTGTCTG+AGG 0.551570 3_3:+66673321 None:intergenic
GATAGATGGATAGATGGGTA+GGG 0.554464 3_3:+66675357 None:intergenic
AACATCAACTAGACAGACAA+AGG 0.555337 3_3:-66673158 Msa0466110:CDS
TAAAGTACTGGTCTAGAAGA+GGG 0.555992 3_3:-66671876 Msa0466110:CDS
GCCATAAACAATGTCAGTGA+AGG 0.556282 3_3:+66672264 None:intergenic
AGACACAGAGTTGCAACAAA+GGG 0.557784 3_3:-66673317 Msa0466110:CDS
CGTTGGGCATGATGATGTCT+GGG 0.560325 3_3:+66673423 None:intergenic
AACCCAAACACACACGATTG+AGG 0.562828 3_3:+66675318 None:intergenic
CATTCATGCGATCATACGGC+CGG 0.566818 3_3:-66675421 Msa0466110:five_prime_UTR
CCATAAACAATGTCAGTGAA+GGG 0.567655 3_3:+66672265 None:intergenic
CATGATGATGTCTGGGAATG+TGG 0.568095 3_3:+66673430 None:intergenic
GGCAATAGCTTCTGGTCAAG+TGG 0.568702 3_3:+66671847 None:intergenic
ACACACACGATTGAGGAAGA+AGG 0.574402 3_3:+66675325 None:intergenic
ACTGCAGGAGTGAAGAAGCC+AGG 0.579048 3_3:-66672456 Msa0466110:intron
CAGACACAGAGTTGCAACAA+AGG 0.579774 3_3:-66673318 Msa0466110:CDS
AGACAAGTCTATCAAGGATG+TGG 0.585793 3_3:+66671796 None:intergenic
ACATCAACTAGACAGACAAA+GGG 0.586910 3_3:-66673157 Msa0466110:CDS
TACGCAGGTGATTGATACAA+GGG 0.588207 3_3:-66674223 Msa0466110:intron
GGTTGTGAGAGCTTTGCCAT+GGG 0.593154 3_3:-66675680 Msa0466110:five_prime_UTR
TGCGTGATAATTGAGATTCT+GGG 0.593482 3_3:-66675716 Msa0466110:five_prime_UTR
GACCATAGAAGTTTCTCAGA+GGG 0.594094 3_3:+66673352 None:intergenic
TGAAGCATCAGAGTTAATCA+TGG 0.595342 3_3:-66672397 Msa0466110:intron
TGTCTAGTTGATGTTGACTG+TGG 0.599422 3_3:+66673166 None:intergenic
GCGTGCCATTCAATAAATCC+CGG 0.605280 3_3:+66675402 None:intergenic
ACAAGGGTAAGTTACCTGAC+AGG 0.607943 3_3:-66674207 Msa0466110:intron
TGGGTTGTGAGTGGATGGAA+AGG 0.618328 3_3:-66675532 Msa0466110:intron
GGCTCTTTGACACAATGTCT+AGG 0.619400 3_3:+66671820 None:intergenic
GGTTGTGAGAGCTTCATCAT+GGG 0.623455 3_3:-66675611 Msa0466110:five_prime_UTR
GACGAATCACAACTCGCCCA+TGG 0.626690 3_3:+66675664 None:intergenic
TTGAGGAAGAAGGAACGAGA+TGG 0.631328 3_3:+66675335 None:intergenic
CTTTCCAATGAAGACTCAAG+TGG 0.631381 3_3:+66672865 None:intergenic
ACCATGATGGTTCAAAAGCG+AGG 0.633614 3_3:-66672673 Msa0466110:CDS
CTTCGTGAGTATGACCATGA+TGG 0.634215 3_3:-66672686 Msa0466110:CDS
CAAGTCTATCAAGGATGTGG+CGG 0.639966 3_3:+66671799 None:intergenic
ATTCATGCGATCATACGGCC+GGG 0.642789 3_3:-66675420 Msa0466110:five_prime_UTR
AGAGCCATTGAGTCTTGCAG+AGG 0.643454 3_3:-66672212 Msa0466110:CDS
TGATATAAGATACATTGACT+GGG 0.644285 3_3:-66672974 Msa0466110:CDS
TCCAATGAAGACTCAAGTGG+AGG 0.644383 3_3:+66672868 None:intergenic
CATAAACAATGTCAGTGAAG+GGG 0.650053 3_3:+66672266 None:intergenic
ATATCAGGAACTGAAATATG+GGG 0.654119 3_3:+66672991 None:intergenic
TGCATTGGCAAGTGATAGAG+TGG 0.659077 3_3:+66673386 None:intergenic
ATTCTGGGAAGGAGCTGGTG+CGG 0.660668 3_3:-66675701 Msa0466110:five_prime_UTR
GGATCCACAACACAGTGCTG+CGG 0.669078 3_3:-66675295 Msa0466110:five_prime_UTR
TGATAATTGAGATTCTGGGA+AGG 0.677729 3_3:-66675712 Msa0466110:five_prime_UTR
TAGATCGCCGATGAATCGTG+CGG 0.693040 3_3:-66675632 Msa0466110:five_prime_UTR
GGAATGTGGTACGAGCAACT+GGG 0.693669 3_3:+66673444 None:intergenic
GGACCATAGAAGTTTCTCAG+AGG 0.703711 3_3:+66673351 None:intergenic
CATACAGCTGTAGCAACATG+TGG 0.711649 3_3:-66673530 Msa0466110:five_prime_UTR
GTGGTGGGCAGATGTGAAAG+CGG 0.723068 3_3:-66673091 Msa0466110:CDS
GCAGGAGTGAAGAAGCCAGG+TGG 0.732956 3_3:-66672453 Msa0466110:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATCAATAATAATTTTCT+TGG + chr3_3:66672693-66672712 None:intergenic 10.0%
!! TCGAATTTACATTATTTAAT+CGG - chr3_3:66672042-66672061 Msa0466110:intron 15.0%
!! ATTATTATTGATAAATCTCT+AGG - chr3_3:66672698-66672717 Msa0466110:intron 15.0%
!!! TTTCATGTATATTTTAAAGT+TGG - chr3_3:66672957-66672976 Msa0466110:CDS 15.0%
!!! GAATTTTTTTTTTAATGAGA+AGG - chr3_3:66673503-66673522 Msa0466110:five_prime_UTR 15.0%
!!! GATTAAACAAATTTGAAATT+TGG + chr3_3:66673667-66673686 None:intergenic 15.0%
!! TATGTTAAACCATAAATATT+CGG - chr3_3:66674964-66674983 Msa0466110:intron 15.0%
!! TTCATAAATTAAAATGTACA+AGG + chr3_3:66675258-66675277 None:intergenic 15.0%
!! TTTGGAAAATAAGTTGTTTA+TGG + chr3_3:66672172-66672191 None:intergenic 20.0%
!! AAAAAGCTTATTCATATGTT+TGG + chr3_3:66672190-66672209 None:intergenic 20.0%
!! TATTACTATCCTTAATATTG+TGG - chr3_3:66672356-66672375 Msa0466110:intron 20.0%
!! AACAAGCAATATAAAAAACT+TGG + chr3_3:66672443-66672462 None:intergenic 20.0%
!! TTTGAACTTAATTCATGTAA+AGG - chr3_3:66672747-66672766 Msa0466110:intron 20.0%
!! CATGAACAAAAAAAAAATCA+TGG + chr3_3:66673133-66673152 None:intergenic 20.0%
!!! CATGATTTTTTTTTTGTTCA+TGG - chr3_3:66673131-66673150 Msa0466110:CDS 20.0%
!! TGACTAATATTAATCAACTA+TGG - chr3_3:66673271-66673290 Msa0466110:CDS 20.0%
!!! ATAGGCATTCAATATTATTT+TGG - chr3_3:66673431-66673450 Msa0466110:CDS 20.0%
!!! TATTTATTACCATTTCCTTT+TGG - chr3_3:66673541-66673560 Msa0466110:five_prime_UTR 20.0%
!!! AGAAGTATTTAATAAGGAAT+AGG + chr3_3:66674035-66674054 None:intergenic 20.0%
!! CAGAAAGAAATGTTTATAAA+TGG + chr3_3:66675316-66675335 None:intergenic 20.0%
!!! ACTATTTTTTTTTACCAAAC+TGG - chr3_3:66675563-66675582 Msa0466110:intron 20.0%
!! TATAGAAAAATGAGAAAGTT+GGG - chr3_3:66675669-66675688 Msa0466110:five_prime_UTR 20.0%
!!! TTAATTAAGATTTGGTGATG+TGG - chr3_3:66671814-66671833 Msa0466110:CDS 25.0%
! CTTCTAATTATTGCTTATAC+TGG - chr3_3:66672122-66672141 Msa0466110:intron 25.0%
! ATAAGTTGTTTATGGAAACA+TGG + chr3_3:66672164-66672183 None:intergenic 25.0%
! AATTGCATTAATGATGTGTT+TGG - chr3_3:66672403-66672422 Msa0466110:CDS 25.0%
! TAATTGTTTAGTACCATGAT+AGG - chr3_3:66672831-66672850 Msa0466110:CDS 25.0%
!!! TGAAAATTTTGTTTTTACGC+AGG - chr3_3:66673032-66673051 Msa0466110:CDS 25.0%
! TTACATATGCTCAATAATAC+AGG + chr3_3:66673193-66673212 None:intergenic 25.0%
! GTATGTAATAGCAATCTTAA+AGG + chr3_3:66673404-66673423 None:intergenic 25.0%
!!! AATATTATTTTGGCAACTAC+TGG - chr3_3:66673441-66673460 Msa0466110:CDS 25.0%
!!! CAAGTGAGAAGTATTTAATA+AGG + chr3_3:66674041-66674060 None:intergenic 25.0%
! TATATCAGGAACTGAAATAT+GGG + chr3_3:66674283-66674302 None:intergenic 25.0%
! TTATATCAGGAACTGAAATA+TGG + chr3_3:66674284-66674303 None:intergenic 25.0%
!! TGATATAAGATACATTGACT+GGG - chr3_3:66674296-66674315 Msa0466110:intron 25.0%
!!! TTCAAACTTGTTCTGAAATT+TGG - chr3_3:66674498-66674517 Msa0466110:intron 25.0%
! TAAGCTTATGTTAAAATGCT+AGG - chr3_3:66674732-66674751 Msa0466110:intron 25.0%
!!! GAAGAAATTGAAAAGCATTT+TGG - chr3_3:66674847-66674866 Msa0466110:intron 25.0%
!!! TATGTAGTTTGATTTGATTC+AGG - chr3_3:66674939-66674958 Msa0466110:intron 25.0%
!! TTTGGTAAAAGTGTAGTTAA+AGG - chr3_3:66675213-66675232 Msa0466110:intron 25.0%
! AAACTACATTTGTAAAGTAC+TGG - chr3_3:66675382-66675401 Msa0466110:five_prime_UTR 25.0%
! GTATAGAAAAATGAGAAAGT+TGG - chr3_3:66675668-66675687 Msa0466110:five_prime_UTR 25.0%
GTAACTGAATGAGAAAATGT+AGG + chr3_3:66672083-66672102 None:intergenic 30.0%
AAACAGTGTCATAAGTGTTT+AGG - chr3_3:66672242-66672261 Msa0466110:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr3_3:66672278-66672297 Msa0466110:CDS 30.0%
CAAATAAGTCAATCCAAACA+GGG - chr3_3:66672279-66672298 Msa0466110:CDS 30.0%
! ACTTTTTGTGGTTACTGTTA+CGG - chr3_3:66672330-66672349 Msa0466110:intron 30.0%
TGGAATTCTCCACAATATTA+AGG + chr3_3:66672368-66672387 None:intergenic 30.0%
ACACATCATTAATGCAATTG+TGG + chr3_3:66672402-66672421 None:intergenic 30.0%
ACAGAGATGAAATGTTATGA+TGG - chr3_3:66672497-66672516 Msa0466110:intron 30.0%
! CTTTTCTACTAAAGAAGCAA+TGG + chr3_3:66672553-66672572 None:intergenic 30.0%
TTCATCTAAAAATCCTCACA+TGG - chr3_3:66672788-66672807 Msa0466110:intron 30.0%
TACATGAAAAACTGACATGT+AGG + chr3_3:66672946-66672965 None:intergenic 30.0%
!! AAATCTCTTGCTTTTGGTTA+TGG - chr3_3:66673318-66673337 Msa0466110:CDS 30.0%
CTATTACATACCTTTCGTAT+AGG - chr3_3:66673413-66673432 Msa0466110:CDS 30.0%
ATATTGAATGCCTATACGAA+AGG + chr3_3:66673426-66673445 None:intergenic 30.0%
! TATTACCATTTCCTTTTGGT+TGG - chr3_3:66673545-66673564 Msa0466110:five_prime_UTR 30.0%
!! ATTACCATTTCCTTTTGGTT+GGG - chr3_3:66673546-66673565 Msa0466110:intron 30.0%
! TTTGTCGTTCTGATTTGAAT+TGG + chr3_3:66674010-66674029 None:intergenic 30.0%
ATATCAGGAACTGAAATATG+GGG + chr3_3:66674282-66674301 None:intergenic 30.0%
CAGTCAATGTATCTTATATC+AGG + chr3_3:66674297-66674316 None:intergenic 30.0%
CTGATATAAGATACATTGAC+TGG - chr3_3:66674295-66674314 Msa0466110:intron 30.0%
GAAAGTTGTAAATCAGAGTT+TGG - chr3_3:66674423-66674442 Msa0466110:intron 30.0%
! TCTTCATTGTTGTTGTAATC+AGG - chr3_3:66674560-66674579 Msa0466110:intron 30.0%
TAGGATTGTGAAAATTCTGA+GGG - chr3_3:66674751-66674770 Msa0466110:intron 30.0%
ATACTTTGTATGTATACTGC+AGG - chr3_3:66674799-66674818 Msa0466110:intron 30.0%
CAAACCTGCTTAACAATAAA+TGG + chr3_3:66675086-66675105 None:intergenic 30.0%
! AGAATGTTTAGAGTGAAGTT+TGG - chr3_3:66675195-66675214 Msa0466110:intron 30.0%
! TCCATAGCATACTAATTTTC+TGG - chr3_3:66675496-66675515 Msa0466110:five_prime_UTR 30.0%
! CCATAGCATACTAATTTTCT+GGG - chr3_3:66675497-66675516 Msa0466110:five_prime_UTR 30.0%
GATAATACACATTACCAGTT+TGG + chr3_3:66675580-66675599 None:intergenic 30.0%
ACTTAACTAACCAAAAAGAC+AGG + chr3_3:66675612-66675631 None:intergenic 30.0%
TAATCTGTGTTCACTCAAAA+CGG - chr3_3:66675645-66675664 Msa0466110:five_prime_UTR 30.0%
! TGATAATTGAGATTCTGGGA+AGG - chr3_3:66671558-66671577 Msa0466110:three_prime_UTR 35.0%
GTCAAGTGTTTATGCTTCAT+CGG - chr3_3:66671685-66671704 Msa0466110:three_prime_UTR 35.0%
TGTTTATGCTTCATCGGATT+TGG - chr3_3:66671691-66671710 Msa0466110:three_prime_UTR 35.0%
AGATGGATAGATGGATAGAT+GGG + chr3_3:66671921-66671940 None:intergenic 35.0%
!! AACCACAAAAAGTTTGTTGC+TGG + chr3_3:66672323-66672342 None:intergenic 35.0%
!! TGAAATGTTATGATGGACAG+TGG - chr3_3:66672504-66672523 Msa0466110:intron 35.0%
CTATTGAATTACTCTCTACC+TGG + chr3_3:66672653-66672672 None:intergenic 35.0%
! AATCTCTAGGAGAGATTTAG+AGG - chr3_3:66672711-66672730 Msa0466110:intron 35.0%
TAGGAGAGATTTAGAGGTAA+AGG - chr3_3:66672717-66672736 Msa0466110:intron 35.0%
AGGAGAGATTTAGAGGTAAA+GGG - chr3_3:66672718-66672737 Msa0466110:intron 35.0%
ATCTAAAAATCCTCACATGG+TGG - chr3_3:66672791-66672810 Msa0466110:intron 35.0%
TGTTTAGTACCATGATAGGT+AGG - chr3_3:66672835-66672854 Msa0466110:CDS 35.0%
GTTTAGTACCATGATAGGTA+GGG - chr3_3:66672836-66672855 Msa0466110:CDS 35.0%
GGATTTGAGCTCTATTTACA+AGG + chr3_3:66673172-66673191 None:intergenic 35.0%
TCAACTATGGCTATTACTGA+TGG - chr3_3:66673284-66673303 Msa0466110:CDS 35.0%
! GGTAACAAATCTCTTGCTTT+TGG - chr3_3:66673312-66673331 Msa0466110:CDS 35.0%
!! TTATGGTTCTGGATCTAAAG+TGG - chr3_3:66673335-66673354 Msa0466110:CDS 35.0%
TATCGTAATACATGACCATG+TGG - chr3_3:66673359-66673378 Msa0466110:CDS 35.0%
CAACTAAAACACATTCCACA+TGG + chr3_3:66673377-66673396 None:intergenic 35.0%
!! TTACCATTTCCTTTTGGTTG+GGG - chr3_3:66673547-66673566 Msa0466110:intron 35.0%
!!! GGTTTCTGGATTTTGATTAC+TGG + chr3_3:66674079-66674098 None:intergenic 35.0%
AACATCAACTAGACAGACAA+AGG - chr3_3:66674112-66674131 Msa0466110:intron 35.0%
ACATCAACTAGACAGACAAA+GGG - chr3_3:66674113-66674132 Msa0466110:intron 35.0%
! ACTTTTCACTAAGATGTGGT+GGG - chr3_3:66674164-66674183 Msa0466110:intron 35.0%
TCTACGTAGAAAGGGATTTA+AGG - chr3_3:66674323-66674342 Msa0466110:intron 35.0%
CTACGTAGAAAGGGATTTAA+GGG - chr3_3:66674324-66674343 Msa0466110:intron 35.0%
! AGGAATCTTGAGAGTACAAT+TGG - chr3_3:66674617-66674636 Msa0466110:intron 35.0%
CTAGGATTGTGAAAATTCTG+AGG - chr3_3:66674750-66674769 Msa0466110:intron 35.0%
! TGAAGCATCAGAGTTAATCA+TGG - chr3_3:66674873-66674892 Msa0466110:intron 35.0%
AACCATAAATATTCGGATGC+AGG - chr3_3:66674971-66674990 Msa0466110:intron 35.0%
ATAAATATTCGGATGCAGGT+GGG - chr3_3:66674975-66674994 Msa0466110:intron 35.0%
CATAAACAATGTCAGTGAAG+GGG + chr3_3:66675007-66675026 None:intergenic 35.0%
CCATAAACAATGTCAGTGAA+GGG + chr3_3:66675008-66675027 None:intergenic 35.0%
CTGACATTGTTTATGGCAAT+CGG - chr3_3:66675012-66675031 Msa0466110:intron 35.0%
ATTGTTTATGGCAATCGGAA+TGG - chr3_3:66675017-66675036 Msa0466110:intron 35.0%
TTGTTTATGGCAATCGGAAT+GGG - chr3_3:66675018-66675037 Msa0466110:intron 35.0%
! GGAATGGGTTTCTAACTATT+TGG - chr3_3:66675033-66675052 Msa0466110:intron 35.0%
GTTTCAATGATCGTGATGAT+AGG - chr3_3:66675347-66675366 Msa0466110:five_prime_UTR 35.0%
!! TAAAGTACTGGTCTAGAAGA+GGG - chr3_3:66675394-66675413 Msa0466110:five_prime_UTR 35.0%
CCCAGAAAATTAGTATGCTA+TGG + chr3_3:66675500-66675519 None:intergenic 35.0%
AACTAACCAAAAAGACAGGT+TGG + chr3_3:66675608-66675627 None:intergenic 35.0%
AATCTGTGTTCACTCAAAAC+GGG - chr3_3:66675646-66675665 Msa0466110:five_prime_UTR 35.0%
! TATGCTTCATCGGATTTGGT+CGG - chr3_3:66671695-66671714 Msa0466110:three_prime_UTR 40.0%
GATGCATTCATGCGATCATA+CGG - chr3_3:66671845-66671864 Msa0466110:CDS 40.0%
ATCGCACTTCAGTAACTTTG+AGG + chr3_3:66671893-66671912 None:intergenic 40.0%
GATAGATGGATAGATGGGTA+GGG + chr3_3:66671916-66671935 None:intergenic 40.0%
GAGATGGATAGATGGATAGA+TGG + chr3_3:66671922-66671941 None:intergenic 40.0%
TTCCTCAATCGTGTGTGTTT+GGG - chr3_3:66671950-66671969 Msa0466110:intron 40.0%
CGTCAAACACCATTCACTTT+CGG - chr3_3:66671998-66672017 Msa0466110:intron 40.0%
GAGAACTTACCGAAAGTGAA+TGG + chr3_3:66672010-66672029 None:intergenic 40.0%
! TGCCAGCAACAAACTTTTTG+TGG - chr3_3:66672318-66672337 Msa0466110:intron 40.0%
CAATTGTGGACACATTAGTC+TGG + chr3_3:66672388-66672407 None:intergenic 40.0%
GTAGAACTACCACTAAGCAT+AGG - chr3_3:66672624-66672643 Msa0466110:intron 40.0%
!!! TCGTTTTTTTCCACCATGTG+AGG + chr3_3:66672804-66672823 None:intergenic 40.0%
!! TTGCCTAGTGTTTTGTTCCA+TGG - chr3_3:66672859-66672878 Msa0466110:CDS 40.0%
!! TGCCTAGTGTTTTGTTCCAT+GGG - chr3_3:66672860-66672879 Msa0466110:CDS 40.0%
AACCCATGGAACAAAACACT+AGG + chr3_3:66672865-66672884 None:intergenic 40.0%
CAGGATAGTGTCTACTCATT+TGG - chr3_3:66672886-66672905 Msa0466110:CDS 40.0%
TTACGCAGGTGATTGATACA+AGG - chr3_3:66673046-66673065 Msa0466110:CDS 40.0%
TACGCAGGTGATTGATACAA+GGG - chr3_3:66673047-66673066 Msa0466110:CDS 40.0%
TTGAGTCATGATTTCACGTG+TGG - chr3_3:66673092-66673111 Msa0466110:CDS 40.0%
!! CTTGCTTTTGGTTATGGTTC+TGG - chr3_3:66673324-66673343 Msa0466110:CDS 40.0%
AGTAGACACAACACTAAGCA+AGG - chr3_3:66673478-66673497 Msa0466110:exon 40.0%
ATACCCCAACCAAAAGGAAA+TGG + chr3_3:66673553-66673572 None:intergenic 40.0%
ACATGTATACCCCAACCAAA+AGG + chr3_3:66673559-66673578 None:intergenic 40.0%
! GGTGAGTTTTCTCTTTCGTT+GGG + chr3_3:66673866-66673885 None:intergenic 40.0%
! TGGTGAGTTTTCTCTTTCGT+TGG + chr3_3:66673867-66673886 None:intergenic 40.0%
GACCATAGAAGTTTCTCAGA+GGG + chr3_3:66673921-66673940 None:intergenic 40.0%
AGACACAGAGTTGCAACAAA+GGG - chr3_3:66673953-66673972 Msa0466110:intron 40.0%
AAGGGCTAGAAAGCAATTAC+AGG - chr3_3:66673971-66673990 Msa0466110:intron 40.0%
! TTGATGTTGACTGTGGTTTC+TGG + chr3_3:66674100-66674119 None:intergenic 40.0%
! TGTCTAGTTGATGTTGACTG+TGG + chr3_3:66674107-66674126 None:intergenic 40.0%
AGACAGACAAAGGGAATTCA+AGG - chr3_3:66674122-66674141 Msa0466110:intron 40.0%
! GTGCACTTTTCACTAAGATG+TGG - chr3_3:66674160-66674179 Msa0466110:intron 40.0%
! CACTTTTCACTAAGATGTGG+TGG - chr3_3:66674163-66674182 Msa0466110:intron 40.0%
TGGCCAAAGAATCAACTTTG+AGG - chr3_3:66674206-66674225 Msa0466110:intron 40.0%
GGCCAAAGAATCAACTTTGA+GGG - chr3_3:66674207-66674226 Msa0466110:intron 40.0%
! TGCCCTCAAAGTTGATTCTT+TGG + chr3_3:66674212-66674231 None:intergenic 40.0%
GGGCATTCTATGTTCAACTA+TGG - chr3_3:66674227-66674246 Msa0466110:intron 40.0%
! TATGGGGCAGTGACAATTTT+GGG + chr3_3:66674266-66674285 None:intergenic 40.0%
! ATATGGGGCAGTGACAATTT+TGG + chr3_3:66674267-66674286 None:intergenic 40.0%
CTTTCCAATGAAGACTCAAG+TGG + chr3_3:66674408-66674427 None:intergenic 40.0%
GCTGTATTTAGTAACTCAGC+TGG - chr3_3:66674456-66674475 Msa0466110:intron 40.0%
!!! TGAGTGGTGCTTTTTCTGTA+TGG - chr3_3:66674661-66674680 Msa0466110:intron 40.0%
CACCTGCATCCGAATATTTA+TGG + chr3_3:66674976-66674995 None:intergenic 40.0%
CATAAATATTCGGATGCAGG+TGG - chr3_3:66674974-66674993 Msa0466110:intron 40.0%
CCCTTCACTGACATTGTTTA+TGG - chr3_3:66675005-66675024 Msa0466110:intron 40.0%
GCCATAAACAATGTCAGTGA+AGG + chr3_3:66675009-66675028 None:intergenic 40.0%
GGAGCCATTTATTGTTAAGC+AGG - chr3_3:66675079-66675098 Msa0466110:intron 40.0%
AATGATCGTGATGATAGGTG+AGG - chr3_3:66675352-66675371 Msa0466110:five_prime_UTR 40.0%
!! GTAAAGTACTGGTCTAGAAG+AGG - chr3_3:66675393-66675412 Msa0466110:five_prime_UTR 40.0%
! TTGACACAATGTCTAGGATC+TGG + chr3_3:66675447-66675466 None:intergenic 40.0%
AGACAAGTCTATCAAGGATG+TGG + chr3_3:66675477-66675496 None:intergenic 40.0%
CTATGGAGACAAGTCTATCA+AGG + chr3_3:66675483-66675502 None:intergenic 40.0%
!! AACCAAAAAGACAGGTTGGT+GGG + chr3_3:66675604-66675623 None:intergenic 40.0%
! TAACCAAAAAGACAGGTTGG+TGG + chr3_3:66675605-66675624 None:intergenic 40.0%
GGTTGTGAGAGCTTCATCAT+GGG - chr3_3:66671659-66671678 Msa0466110:three_prime_UTR 45.0%
! ATGCTTCATCGGATTTGGTC+GGG - chr3_3:66671696-66671715 Msa0466110:three_prime_UTR 45.0%
TACGGCCGGGATTTATTGAA+TGG - chr3_3:66671863-66671882 Msa0466110:CDS 45.0%
! GCGTGCCATTCAATAAATCC+CGG + chr3_3:66671871-66671890 None:intergenic 45.0%
GGATAGATGGATAGATGGGT+AGG + chr3_3:66671917-66671936 None:intergenic 45.0%
GAAGGAACGAGATGGATAGA+TGG + chr3_3:66671930-66671949 None:intergenic 45.0%
TTGAGGAAGAAGGAACGAGA+TGG + chr3_3:66671938-66671957 None:intergenic 45.0%
ACACACACGATTGAGGAAGA+AGG + chr3_3:66671948-66671967 None:intergenic 45.0%
CTTCCTCAATCGTGTGTGTT+TGG - chr3_3:66671949-66671968 Msa0466110:intron 45.0%
AACCCAAACACACACGATTG+AGG + chr3_3:66671955-66671974 None:intergenic 45.0%
TCAATCGTGTGTGTTTGGGT+TGG - chr3_3:66671954-66671973 Msa0466110:intron 45.0%
CTCAAATTAGAGGCCCTGTT+TGG + chr3_3:66672295-66672314 None:intergenic 45.0%
GCTGGCATTGCTCAAATTAG+AGG + chr3_3:66672305-66672324 None:intergenic 45.0%
!! TGTTATGATGGACAGTGGAC+AGG - chr3_3:66672509-66672528 Msa0466110:intron 45.0%
ACCACTAAGCATAGGTAACC+AGG - chr3_3:66672632-66672651 Msa0466110:intron 45.0%
ACCTGGTTACCTATGCTTAG+TGG + chr3_3:66672636-66672655 None:intergenic 45.0%
!! TGTTTTGTTCCATGGGTTGC+AGG - chr3_3:66672867-66672886 Msa0466110:CDS 45.0%
ACAAGGGTAAGTTACCTGAC+AGG - chr3_3:66673063-66673082 Msa0466110:CDS 45.0%
TGACTCAACACTAACCTGTC+AGG + chr3_3:66673080-66673099 None:intergenic 45.0%
TGGCTATTACTGATGGCAAG+TGG - chr3_3:66673291-66673310 Msa0466110:CDS 45.0%
CATACAGCTGTAGCAACATG+TGG - chr3_3:66673740-66673759 Msa0466110:intron 45.0%
! CATGATGATGTCTGGGAATG+TGG + chr3_3:66673843-66673862 None:intergenic 45.0%
! TGCATTGGCAAGTGATAGAG+TGG + chr3_3:66673887-66673906 None:intergenic 45.0%
AGAAGTTTCTCAGAGGGACT+TGG + chr3_3:66673915-66673934 None:intergenic 45.0%
! GTCCCTCTGAGAAACTTCTA+TGG - chr3_3:66673916-66673935 Msa0466110:intron 45.0%
GGACCATAGAAGTTTCTCAG+AGG + chr3_3:66673922-66673941 None:intergenic 45.0%
TTGTTGCAACTCTGTGTCTG+AGG + chr3_3:66673952-66673971 None:intergenic 45.0%
CAGACACAGAGTTGCAACAA+AGG - chr3_3:66673952-66673971 Msa0466110:intron 45.0%
!! TGACTGTGGTTTCTGGTTTC+TGG + chr3_3:66674093-66674112 None:intergenic 45.0%
TACCCTACTCTTTAACGCTC+TGG - chr3_3:66674379-66674398 Msa0466110:intron 45.0%
TCCAATGAAGACTCAAGTGG+AGG + chr3_3:66674405-66674424 None:intergenic 45.0%
CTTCGTGAGTATGACCATGA+TGG - chr3_3:66674584-66674603 Msa0466110:intron 45.0%
ACCATGATGGTTCAAAAGCG+AGG - chr3_3:66674597-66674616 Msa0466110:intron 45.0%
!! TCCTCGCTTTTGAACCATCA+TGG + chr3_3:66674601-66674620 None:intergenic 45.0%
AAGTCATCAGACACAGTGAG+TGG - chr3_3:66674645-66674664 Msa0466110:intron 45.0%
TAGGATCTGGCAATAGCTTC+TGG + chr3_3:66675434-66675453 None:intergenic 45.0%
GGCTCTTTGACACAATGTCT+AGG + chr3_3:66675453-66675472 None:intergenic 45.0%
CAAGTCTATCAAGGATGTGG+CGG + chr3_3:66675474-66675493 None:intergenic 45.0%
!!! TTTTTTTTTTAATTAAGATT+TGG - chr3_3:66671806-66671825 Msa0466110:exon 5.0%
!! TAAAAAAAAATAGTAAATAA+TGG + chr3_3:66675557-66675576 None:intergenic 5.0%
! TTGAGATTCTGGGAAGGAGC+TGG - chr3_3:66671564-66671583 Msa0466110:three_prime_UTR 50.0%
GGTTGTGAGAGCTTTGCCAT+GGG - chr3_3:66671590-66671609 Msa0466110:three_prime_UTR 50.0%
TAGATCGCCGATGAATCGTG+CGG - chr3_3:66671638-66671657 Msa0466110:three_prime_UTR 50.0%
CTCACAACCGCACGATTCAT+CGG + chr3_3:66671648-66671667 None:intergenic 50.0%
CGGTTGTGAGAGCTTCATCA+TGG - chr3_3:66671658-66671677 Msa0466110:three_prime_UTR 50.0%
TTGACTGGGTTGTGAGTGGA+TGG - chr3_3:66671733-66671752 Msa0466110:three_prime_UTR 50.0%
TGGGTTGTGAGTGGATGGAA+AGG - chr3_3:66671738-66671757 Msa0466110:three_prime_UTR 50.0%
CATTCATGCGATCATACGGC+CGG - chr3_3:66671849-66671868 Msa0466110:CDS 50.0%
ATTCATGCGATCATACGGCC+GGG - chr3_3:66671850-66671869 Msa0466110:CDS 50.0%
CTAGGCAACCCTACCTATCA+TGG + chr3_3:66672847-66672866 None:intergenic 50.0%
AGACACTATCCTGCAACCCA+TGG + chr3_3:66672879-66672898 None:intergenic 50.0%
AGCTGTAGCAACATGTGGTC+AGG - chr3_3:66673745-66673764 Msa0466110:intron 50.0%
GGAATGTGGTACGAGCAACT+GGG + chr3_3:66673829-66673848 None:intergenic 50.0%
! CGTTGGGCATGATGATGTCT+GGG + chr3_3:66673850-66673869 None:intergenic 50.0%
! TCGTTGGGCATGATGATGTC+TGG + chr3_3:66673851-66673870 None:intergenic 50.0%
AGGGACTTGGCTATCTGCAT+TGG + chr3_3:66673902-66673921 None:intergenic 50.0%
CTCTGTGTCTGAGGAAGACT+TGG + chr3_3:66673943-66673962 None:intergenic 50.0%
GCAGATGTGAAAGCGGCATT+TGG - chr3_3:66674186-66674205 Msa0466110:intron 50.0%
TGGGCTGCTCTACGTAGAAA+GGG - chr3_3:66674315-66674334 Msa0466110:intron 50.0%
! GGCCAGAGCGTTAAAGAGTA+GGG + chr3_3:66674384-66674403 None:intergenic 50.0%
! AGGCCAGAGCGTTAAAGAGT+AGG + chr3_3:66674385-66674404 None:intergenic 50.0%
GCCTCCACTTGAGTCTTCAT+TGG - chr3_3:66674401-66674420 Msa0466110:intron 50.0%
ATTTCTTCAGCTGTGCCACC+TGG + chr3_3:66674835-66674854 None:intergenic 50.0%
AGAGCCATTGAGTCTTGCAG+AGG - chr3_3:66675058-66675077 Msa0466110:intron 50.0%
GGCAATAGCTTCTGGTCAAG+TGG + chr3_3:66675426-66675445 None:intergenic 50.0%
! CACCCACCAACCTGTCTTTT+TGG - chr3_3:66675599-66675618 Msa0466110:five_prime_UTR 50.0%
! ATTCTGGGAAGGAGCTGGTG+CGG - chr3_3:66671569-66671588 Msa0466110:three_prime_UTR 55.0%
CGGTTGTGAGAGCTTTGCCA+TGG - chr3_3:66671589-66671608 Msa0466110:three_prime_UTR 55.0%
GACGAATCACAACTCGCCCA+TGG + chr3_3:66671609-66671628 None:intergenic 55.0%
GTGGTTGACTGGGTTGTGAG+TGG - chr3_3:66671729-66671748 Msa0466110:three_prime_UTR 55.0%
GGATCCACAACACAGTGCTG+CGG - chr3_3:66671975-66671994 Msa0466110:intron 55.0%
GGGAATGTGGTACGAGCAAC+TGG + chr3_3:66673830-66673849 None:intergenic 55.0%
!! GTGGTGGGCAGATGTGAAAG+CGG - chr3_3:66674179-66674198 Msa0466110:intron 55.0%
CTGGGCTGCTCTACGTAGAA+AGG - chr3_3:66674314-66674333 Msa0466110:intron 55.0%
ACTGCAGGAGTGAAGAAGCC+AGG - chr3_3:66674814-66674833 Msa0466110:intron 55.0%
GGCTCCTCTGCAAGACTCAA+TGG + chr3_3:66675065-66675084 None:intergenic 55.0%
! GATTTGGTCGGGCTGCGTGA+GGG - chr3_3:66671707-66671726 Msa0466110:three_prime_UTR 60.0%
CTGCGTGAGGGTGGTTGACT+GGG - chr3_3:66671719-66671738 Msa0466110:three_prime_UTR 60.0%
GCAGGAGTGAAGAAGCCAGG+TGG - chr3_3:66674817-66674836 Msa0466110:intron 60.0%
! GGATTTGGTCGGGCTGCGTG+AGG - chr3_3:66671706-66671725 Msa0466110:three_prime_UTR 65.0%
GCTGCGTGAGGGTGGTTGAC+TGG - chr3_3:66671718-66671737 Msa0466110:three_prime_UTR 65.0%
GACGCCGCAGCACTGTGTTG+TGG + chr3_3:66671982-66672001 None:intergenic 65.0%
TTGGTCGGGCTGCGTGAGGG+TGG - chr3_3:66671710-66671729 Msa0466110:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66671556 66675736 66671556 ID=Msa0466110;Name=Msa0466110
chr3_3 mRNA 66671556 66675736 66671556 ID=Msa0466110-mRNA-1;Parent=Msa0466110;Name=Msa0466110-mRNA-1;_AED=0.20;_eAED=0.20;_QI=541|1|1|1|0.57|0.5|8|251|352
chr3_3 exon 66671556 66671923 66671556 ID=Msa0466110-mRNA-1:exon:15206;Parent=Msa0466110-mRNA-1
chr3_3 exon 66672192 66672299 66672192 ID=Msa0466110-mRNA-1:exon:15205;Parent=Msa0466110-mRNA-1
chr3_3 exon 66672398 66672471 66672398 ID=Msa0466110-mRNA-1:exon:15204;Parent=Msa0466110-mRNA-1
chr3_3 exon 66672633 66672710 66672633 ID=Msa0466110-mRNA-1:exon:15203;Parent=Msa0466110-mRNA-1
chr3_3 exon 66672815 66673564 66672815 ID=Msa0466110-mRNA-1:exon:15202;Parent=Msa0466110-mRNA-1
chr3_3 exon 66674208 66674238 66674208 ID=Msa0466110-mRNA-1:exon:15201;Parent=Msa0466110-mRNA-1
chr3_3 exon 66675273 66675541 66675273 ID=Msa0466110-mRNA-1:exon:15200;Parent=Msa0466110-mRNA-1
chr3_3 exon 66675564 66675736 66675564 ID=Msa0466110-mRNA-1:exon:15199;Parent=Msa0466110-mRNA-1
chr3_3 five_prime_UTR 66675564 66675736 66675564 ID=Msa0466110-mRNA-1:five_prime_utr;Parent=Msa0466110-mRNA-1
chr3_3 five_prime_UTR 66675273 66675541 66675273 ID=Msa0466110-mRNA-1:five_prime_utr;Parent=Msa0466110-mRNA-1
chr3_3 five_prime_UTR 66674208 66674238 66674208 ID=Msa0466110-mRNA-1:five_prime_utr;Parent=Msa0466110-mRNA-1
chr3_3 five_prime_UTR 66673497 66673564 66673497 ID=Msa0466110-mRNA-1:five_prime_utr;Parent=Msa0466110-mRNA-1
chr3_3 CDS 66672815 66673496 66672815 ID=Msa0466110-mRNA-1:cds;Parent=Msa0466110-mRNA-1
chr3_3 CDS 66672633 66672710 66672633 ID=Msa0466110-mRNA-1:cds;Parent=Msa0466110-mRNA-1
chr3_3 CDS 66672398 66672471 66672398 ID=Msa0466110-mRNA-1:cds;Parent=Msa0466110-mRNA-1
chr3_3 CDS 66672192 66672299 66672192 ID=Msa0466110-mRNA-1:cds;Parent=Msa0466110-mRNA-1
chr3_3 CDS 66671807 66671923 66671807 ID=Msa0466110-mRNA-1:cds;Parent=Msa0466110-mRNA-1
chr3_3 three_prime_UTR 66671556 66671806 66671556 ID=Msa0466110-mRNA-1:three_prime_utr;Parent=Msa0466110-mRNA-1
Gene Sequence

>Msa0466110

ATGCTGTCTACTAGTGCTGCTGCTCAGCTTCCCAGTTGCTCGTACCACATTCCCAGACATCATCATGCCCAACGAAAGAGAAAACTCACCACTCTATCACTTGCCAATGCAGATAGCCAAGTCCCTCTGAGAAACTTCTATGGTCCAAGTCTTCCTCAGACACAGAGTTGCAACAAAGGGCTAGAAAGCAATTACAGGTCTAGATACAATTCCAATTCAAATCAGAACGACAAACACCTATTCCTTATTAAATACTTCTCACTTGCTGACTCAGAAGACACCAGTAATCAAAATCCAGAAACCAGAAACCACAGTCAACATCAACTAGACAGACAAAGGGAATTCAAGGAACACAAAAAAGACAGTGCACTTTTCACTAAGATGTGGTGGGCAGATGTGAAAGCGGCATTTGGCCAAAGAATCAACTTTGAGGGCATTCTATGTTCAACTATGGTCATCTTAAAAGACCCAAAATTGTCACTGCCCCATATTTCAGTTCCTGATATAAGATACATTGACTGGGCTGCTCTACGTAGAAAGGGATTTAAGGGTGTTGTCTTTGACAAAGATAATACTATTACAGTACCCTACTCTTTAACGCTCTGGCCTCCACTTGAGTCTTCATTGGAAAGTTGTAAATCAGAGTTTGGTCAAGATATTGCTGTATTTAGTAACTCAGCTGGACTTCGTGAGTATGACCATGATGGTTCAAAAGCGAGGAATCTTGAGAGTACAATTGGAATTAAAGTCATCAGACACAGAGTGAAGAAGCCAGGTGGCACAGCTGAAGAAATTGAAAAGCATTTTGGCTGTGAAGCATCAGAGTTAATCATGGTGGGTGATCGCCCCTTCACTGACATTGTTTATGGCAATCGGAATGGGTTTCTAACTATTTGGACAGAGCCATTGAGTCTTGCAGAGGAGCCATTTATTGTTAAGCAGGTGAGGAAGCTAGAAACTACATTTGTAAAGTACTGGTCTAGAAGAGGGTTGAAGCCACTTGACCAGAAGCTATTGCCAGATCCTAGACATTGTGTCAAAGAGCCGCCACATCCTTGA
Protein sequence

>Msa0466110

MLSTSAAAQLPSCSYHIPRHHHAQRKRKLTTLSLANADSQVPLRNFYGPSLPQTQSCNKGLESNYRSRYNSNSNQNDKHLFLIKYFSLADSEDTSNQNPETRNHSQHQLDRQREFKEHKKDSALFTKMWWADVKAAFGQRINFEGILCSTMVILKDPKLSLPHISVPDIRYIDWAALRRKGFKGVVFDKDNTITVPYSLTLWPPLESSLESCKSEFGQDIAVFSNSAGLREYDHDGSKARNLESTIGIKVIRHRVKKPGGTAEEIEKHFGCEASELIMVGDRPFTDIVYGNRNGFLTIWTEPLSLAEEPFIVKQVRKLETTFVKYWSRRGLKPLDQKLLPDPRHCVKEPPHP*