AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466740 MtrunA17_Chr3g0120451 67.539 191 16 3 79 224 635 824 3.55e-72 237
Msa0466740 MtrunA17_Chr3g0120451 70.866 127 30 3 1 125 1 122 8.66e-40 147
Msa0466740 MtrunA17_Chr3g0097721 39.791 191 67 3 79 224 202 389 1.27e-35 132
Msa0466740 MtrunA17_Chr3g0097721 37.975 158 81 6 1 157 2 143 3.97e-16 77.8
Msa0466740 MtrunA17_Chr3g0097311 39.791 191 70 2 79 224 535 725 2.83e-35 134
Msa0466740 MtrunA17_Chr3g0097311 39.552 134 68 6 21 146 19 147 2.20e-13 70.1
Msa0466740 MtrunA17_Chr3g0097561 49.254 134 55 3 101 224 53 183 2.22e-34 124
Msa0466740 MtrunA17_Chr3g0097331 38.542 192 72 3 79 224 463 654 9.05e-34 129
Msa0466740 MtrunA17_Chr3g0097691 50.000 132 53 2 103 224 112 240 9.92e-34 124
Msa0466740 MtrunA17_Chr4g0003781 48.175 137 52 3 103 224 414 546 1.34e-33 129
Msa0466740 MtrunA17_Chr3g0095011 49.242 132 57 1 103 224 617 748 5.78e-33 127
Msa0466740 MtrunA17_Chr3g0095011 38.406 138 65 6 20 144 15 145 1.61e-13 70.5
Msa0466740 MtrunA17_Chr3g0097501 37.306 193 74 3 79 224 52 244 3.75e-32 120
Msa0466740 MtrunA17_Chr3g0097341 35.417 192 78 2 79 224 554 745 4.91e-32 125
Msa0466740 MtrunA17_Chr3g0097291 48.872 133 57 2 103 224 198 330 9.15e-32 121
Msa0466740 MtrunA17_Chr3g0097291 37.857 140 61 5 37 153 10 146 4.56e-18 83.2
Msa0466740 MtrunA17_Chr3g0097281 47.407 135 60 2 101 224 133 267 1.06e-31 119
Msa0466740 MtrunA17_Chr3g0097701 50.000 132 53 3 103 224 620 748 1.24e-31 124
Msa0466740 MtrunA17_Chr3g0097361 36.979 192 75 3 79 224 623 814 2.01e-31 123
Msa0466740 MtrunA17_Chr3g0097361 29.878 164 82 5 21 183 20 151 5.96e-11 62.8
Msa0466740 MtrunA17_Chr8g0345411 46.667 135 61 2 101 224 172 306 2.51e-31 119
Msa0466740 MtrunA17_Chr3g0097261 36.574 216 81 5 79 245 564 772 3.37e-31 122
Msa0466740 MtrunA17_Chr2g0317551 48.485 132 58 1 103 224 613 744 5.99e-31 122
Msa0466740 MtrunA17_Chr3g0093881 48.120 133 58 2 103 224 624 756 6.95e-31 121
Msa0466740 MtrunA17_Chr3g0093881 35.099 151 83 6 1 147 15 154 3.70e-13 69.7
Msa0466740 MtrunA17_Chr3g0104561 38.342 193 72 4 79 224 552 744 1.53e-30 120
Msa0466740 MtrunA17_Chr3g0104561 36.986 146 71 6 18 159 17 145 3.01e-13 69.7
Msa0466740 MtrunA17_Chr3g0097461 50.376 133 55 2 103 224 613 745 1.86e-30 120
Msa0466740 MtrunA17_Chr3g0097411 47.887 142 61 3 95 224 595 735 3.19e-30 119
Msa0466740 MtrunA17_Chr3g0097411 48.684 76 35 3 10 85 19 90 1.92e-13 70.5
Msa0466740 MtrunA17_Chr3g0097001 35.124 242 105 6 79 274 454 689 3.23e-30 119
Msa0466740 MtrunA17_Chr8g0354061 35.246 244 91 6 79 263 646 881 8.25e-30 118
Msa0466740 MtrunA17_Chr4g0023651 47.368 133 59 2 103 224 318 450 1.17e-29 117
Msa0466740 MtrunA17_Chr3g0097761 36.458 192 76 3 79 224 556 747 2.28e-29 117
Msa0466740 MtrunA17_Chr3g0097761 49.333 75 34 3 13 87 11 81 6.30e-13 68.9
Msa0466740 MtrunA17_Chr8g0354041 42.246 187 82 7 91 263 702 876 3.44e-29 116
Msa0466740 MtrunA17_Chr3g0096901 38.421 190 100 5 101 279 95 278 2.76e-28 109
Msa0466740 MtrunA17_Chr3g0097321 48.855 131 54 3 103 221 616 745 8.39e-28 112
Msa0466740 MtrunA17_Chr5g0420291 40.854 164 82 6 73 224 35 195 6.49e-27 104
Msa0466740 MtrunA17_Chr8g0354031 37.433 187 95 5 91 263 698 876 1.30e-26 109
Msa0466740 MtrunA17_Chr2g0284891 32.743 226 104 9 79 265 527 743 1.35e-26 109
Msa0466740 MtrunA17_Chr2g0284851 33.846 195 102 6 89 265 61 246 1.87e-25 101
Msa0466740 MtrunA17_Chr6g0455871 37.853 177 79 4 101 257 12 177 2.13e-24 97.4
Msa0466740 MtrunA17_Chr6g0469721 38.012 171 85 7 75 233 7 168 4.38e-24 96.7
Msa0466740 MtrunA17_Chr6g0455751 38.071 197 102 6 64 247 533 722 5.25e-24 101
Msa0466740 MtrunA17_Chr6g0455851 40.120 167 69 5 101 247 831 986 6.76e-24 101
Msa0466740 MtrunA17_Chr6g0455851 36.735 147 64 4 37 160 29 169 1.32e-14 73.9
Msa0466740 MtrunA17_Chr6g0455801 37.056 197 99 6 67 247 723 910 2.10e-23 100
Msa0466740 MtrunA17_Chr6g0465231 40.805 174 72 7 72 223 914 1078 2.82e-23 99.8
Msa0466740 MtrunA17_Chr6g0465181 34.921 189 103 5 51 223 922 1106 3.70e-23 99.4
Msa0466740 MtrunA17_Chr6g0465181 35.821 134 74 4 37 162 39 168 1.33e-15 77.0
Msa0466740 MtrunA17_Chr1g0202011 37.306 193 86 7 73 245 2 179 8.46e-23 93.2
Msa0466740 MtrunA17_Chr6g0455781 40.252 159 80 3 101 247 680 835 1.42e-22 97.4
Msa0466740 MtrunA17_Chr3g0097381 50.000 100 37 2 135 224 1 97 3.23e-22 90.1
Msa0466740 MtrunA17_Chr5g0429421 41.212 165 81 6 73 224 701 862 5.68e-22 95.9
Msa0466740 MtrunA17_Chr5g0429421 34.197 193 82 7 37 189 33 220 1.40e-18 85.9
Msa0466740 MtrunA17_Chr6g0455811 37.056 197 103 7 65 247 750 939 5.92e-22 95.9
Msa0466740 MtrunA17_Chr6g0455811 36.290 124 76 2 37 160 31 151 3.28e-14 72.8
Msa0466740 MtrunA17_Chr2g0284871 37.838 148 73 4 103 232 799 945 6.52e-22 95.5
Msa0466740 MtrunA17_Chr2g0284871 32.716 162 93 5 10 162 17 171 4.40e-12 66.2
Msa0466740 MtrunA17_Chr6g0465131 36.126 191 105 5 56 233 905 1091 6.99e-22 95.5
Msa0466740 MtrunA17_Chr6g0465131 34.586 133 78 3 37 162 39 169 8.03e-13 68.6
Msa0466740 MtrunA17_Chr4g0007381 42.424 132 66 1 103 224 879 1010 8.20e-22 95.5
Msa0466740 MtrunA17_Chr6g0455861 41.615 161 71 5 101 245 320 473 8.67e-22 94.7
Msa0466740 MtrunA17_Chr1g0161321 38.415 164 76 5 73 219 54 209 2.00e-21 89.7
Msa0466740 MtrunA17_Chr4g0007111 47.959 98 41 1 104 191 178 275 2.15e-21 92.4
Msa0466740 MtrunA17_Chr4g0022051 36.269 193 87 7 73 245 138 314 2.22e-21 92.0
Msa0466740 MtrunA17_Chr6g0455721 39.634 164 74 4 101 247 764 919 3.00e-21 93.6
Msa0466740 MtrunA17_Chr6g0455721 36.800 125 73 4 37 160 31 150 2.73e-13 70.1
Msa0466740 MtrunA17_Chr6g0465251 35.928 167 90 3 72 223 289 453 3.09e-21 93.2
Msa0466740 MtrunA17_Chr6g0465151 44.203 138 62 2 101 223 732 869 3.68e-21 93.2
Msa0466740 MtrunA17_Chr4g0007331 46.939 98 42 1 104 191 926 1023 4.50e-21 93.2
Msa0466740 MtrunA17_Chr2g0316441 38.037 163 76 4 104 255 741 889 5.19e-21 92.8
Msa0466740 MtrunA17_Chr4g0007291 47.959 98 41 1 104 191 575 672 5.78e-21 92.8
Msa0466740 MtrunA17_Chr3g0106171 41.401 157 75 5 103 247 820 971 5.92e-21 92.8
Msa0466740 MtrunA17_Chr3g0106171 31.053 190 97 6 8 167 7 192 4.51e-14 72.4
Msa0466740 MtrunA17_Chr1g0169661 37.824 193 86 8 72 245 140 317 6.89e-21 90.9
Msa0466740 MtrunA17_Chr2g0284741 30.864 243 136 8 45 265 746 978 8.88e-21 92.4
Msa0466740 MtrunA17_Chr2g0284741 33.939 165 85 7 10 162 13 165 2.66e-11 63.9
Msa0466740 MtrunA17_Chr4g0007141 46.939 98 42 1 104 191 230 327 9.75e-21 91.3
Msa0466740 MtrunA17_Chr4g0007501 43.262 141 58 3 104 228 194 328 1.27e-20 90.5
Msa0466740 MtrunA17_Chr6g0464821 43.089 123 50 2 103 224 185 288 1.33e-20 90.1
Msa0466740 MtrunA17_Chr5g0439451 36.082 194 99 6 103 281 932 1115 1.38e-20 91.7
Msa0466740 MtrunA17_Chr2g0304481 40.000 145 69 4 104 233 865 1006 1.75e-20 91.3
Msa0466740 MtrunA17_Chr2g0304481 35.404 161 84 7 17 162 14 169 7.72e-12 65.9
Msa0466740 MtrunA17_Chr6g0465211 40.351 171 77 7 72 223 891 1055 2.35e-20 90.9
Msa0466740 MtrunA17_Chr6g0465211 33.500 200 101 7 37 219 39 223 2.52e-17 82.0
Msa0466740 MtrunA17_Chr5g0419961 45.536 112 45 3 103 203 472 578 2.88e-20 90.5
Msa0466740 MtrunA17_Chr6g0464631 37.278 169 85 4 72 223 1002 1166 2.97e-20 90.9
Msa0466740 MtrunA17_Chr6g0464631 34.328 134 77 4 37 162 38 168 2.26e-11 64.3
Msa0466740 MtrunA17_Chr4g0007511 39.306 173 76 5 74 228 856 1017 3.73e-20 90.5
Msa0466740 MtrunA17_Chr4g0007451 39.306 173 76 5 74 228 856 1017 3.76e-20 90.5
Msa0466740 MtrunA17_Chr7g0219371 51.020 98 38 1 104 191 748 845 4.14e-20 90.1
Msa0466740 MtrunA17_Chr7g0219371 38.400 125 74 3 37 160 30 152 3.72e-14 72.8
Msa0466740 MtrunA17_Chr2g0284861 33.155 187 87 6 103 265 803 975 4.43e-20 90.1
Msa0466740 MtrunA17_Chr4g0007151 45.631 103 45 2 104 195 921 1023 4.76e-20 90.1
Msa0466740 MtrunA17_Chr4g0007151 34.247 146 85 5 23 163 14 153 5.02e-11 63.2
Msa0466740 MtrunA17_Chr8g0355911 51.087 92 35 1 103 184 199 290 4.86e-20 88.2
Msa0466740 MtrunA17_Chr4g0008241 37.500 152 84 3 73 213 708 859 5.21e-20 90.1
Msa0466740 MtrunA17_Chr6g0455671 40.000 160 77 5 101 247 746 899 5.44e-20 90.1
Msa0466740 MtrunA17_Chr6g0455671 36.641 131 74 4 37 166 31 153 9.29e-14 71.2
Msa0466740 MtrunA17_Chr4g0008201 50.562 89 34 1 114 192 6 94 7.66e-20 84.7
Msa0466740 MtrunA17_Chr4g0007431 45.217 115 47 3 104 208 875 983 7.68e-20 89.7
Msa0466740 MtrunA17_Chr2g0312401 36.066 183 89 6 73 236 171 344 8.80e-20 87.8
Msa0466740 MtrunA17_Chr4g0005021 47.959 98 41 1 104 191 863 960 1.03e-19 89.4
Msa0466740 MtrunA17_Chr4g0007211 38.961 154 63 5 103 232 925 1071 1.06e-19 89.0
Msa0466740 MtrunA17_Chr5g0411301 33.617 235 130 8 27 245 271 495 1.23e-19 88.6
Msa0466740 MtrunA17_Chr4g0008291 48.980 98 40 1 104 191 816 913 1.26e-19 89.0
Msa0466740 MtrunA17_Chr1g0190571 36.364 187 95 6 73 245 557 733 1.31e-19 88.6
Msa0466740 MtrunA17_Chr1g0190571 33.333 174 100 5 15 175 5 175 2.13e-15 76.3
Msa0466740 MtrunA17_Chr4g0008211 36.810 163 80 4 103 255 851 1000 1.46e-19 88.6
Msa0466740 MtrunA17_Chr8g0335921 45.455 110 44 2 110 209 2 105 2.33e-19 83.6
Msa0466740 MtrunA17_Chr5g0446221 42.373 118 57 2 84 191 42 158 2.41e-19 84.0
Msa0466740 MtrunA17_Chr4g0007201 45.631 103 45 2 104 195 922 1024 2.51e-19 88.2
Msa0466740 MtrunA17_Chr5g0436581 44.545 110 51 1 101 200 163 272 2.65e-19 85.5
Msa0466740 MtrunA17_Chr4g0007441 47.959 98 41 1 104 191 853 950 4.17e-19 87.4
Msa0466740 MtrunA17_Chr5g0420241 34.161 161 98 3 13 166 14 173 5.58e-19 82.4
Msa0466740 MtrunA17_Chr8g0354011 40.141 142 61 6 135 263 1 131 6.08e-19 81.3
Msa0466740 MtrunA17_Chr4g0008271 46.465 99 43 1 103 191 841 939 6.17e-19 87.0
Msa0466740 MtrunA17_Chr6g0455701 37.805 164 77 4 101 247 776 931 6.55e-19 86.7
Msa0466740 MtrunA17_Chr6g0455701 34.959 123 72 3 37 159 31 145 3.06e-12 67.0
Msa0466740 MtrunA17_Chr6g0465291 35.928 167 90 3 72 223 1001 1165 8.08e-19 86.7
Msa0466740 MtrunA17_Chr6g0465291 32.895 152 72 4 37 160 59 208 1.21e-11 65.1
Msa0466740 MtrunA17_Chr5g0439461 35.393 178 86 5 76 245 914 1070 1.15e-18 86.3
Msa0466740 MtrunA17_Chr5g0439461 25.893 224 132 3 1 201 2 214 1.89e-11 64.7
Msa0466740 MtrunA17_Chr5g0426051 31.771 192 107 4 95 272 420 601 1.42e-18 85.5
Msa0466740 MtrunA17_Chr6g0463291 31.841 201 86 6 69 224 492 686 1.57e-18 85.5
Msa0466740 MtrunA17_Chr4g0007101 44.898 98 44 1 104 191 926 1023 1.90e-18 85.5
Msa0466740 MtrunA17_Chr4g0007101 35.252 139 81 4 28 163 21 153 1.72e-11 64.7
Msa0466740 MtrunA17_Chr4g0007091 39.597 149 67 5 104 232 919 1064 2.06e-18 85.5
Msa0466740 MtrunA17_Chr4g0007411 38.889 144 65 4 68 192 372 511 2.28e-18 85.1
Msa0466740 MtrunA17_Chr4g0007571 45.918 98 43 1 104 191 695 792 2.46e-18 85.1
Msa0466740 MtrunA17_Chr5g0446861 37.415 147 70 4 92 225 280 417 4.52e-18 84.0
Msa0466740 MtrunA17_Chr3g0097531 53.425 73 24 1 135 197 1 73 6.80e-18 77.0
Msa0466740 MtrunA17_Chr4g0022071 39.695 131 56 3 73 188 225 347 2.08e-17 81.3
Msa0466740 MtrunA17_Chr8g0375511 31.250 192 104 5 103 279 627 805 2.23e-17 82.4
Msa0466740 MtrunA17_Chr6g0478761 37.589 141 72 2 99 229 168 302 2.55e-17 80.9
Msa0466740 MtrunA17_Chr6g0463301 38.760 129 66 2 73 191 905 1030 2.60e-17 82.0
Msa0466740 MtrunA17_Chr6g0463301 33.333 150 83 6 19 159 20 161 2.09e-11 64.3
Msa0466740 MtrunA17_Chr5g0439511 29.796 245 130 7 47 273 87 307 3.52e-17 80.1
Msa0466740 MtrunA17_Chr6g0463281 37.162 148 78 4 101 233 951 1098 3.87e-17 81.6
Msa0466740 MtrunA17_Chr5g0409041 27.273 242 133 6 41 253 32 259 3.97e-17 81.3
Msa0466740 MtrunA17_Chr2g0304331 39.310 145 73 4 104 233 911 1055 4.20e-17 81.3
Msa0466740 MtrunA17_Chr2g0304331 30.108 186 85 5 17 162 60 240 7.68e-11 62.8
Msa0466740 MtrunA17_Chr8g0380831 43.564 101 47 2 101 191 694 794 6.52e-17 80.9
Msa0466740 MtrunA17_Chr6g0463251 36.486 148 79 4 101 233 911 1058 6.91e-17 80.9
Msa0466740 MtrunA17_Chr8g0380811 43.878 98 45 1 104 191 735 832 8.72e-17 80.5
Msa0466740 MtrunA17_Chr3g0097551 36.842 133 70 5 28 154 28 152 9.16e-17 75.9
Msa0466740 MtrunA17_Chr5g0446871 34.756 164 92 4 85 234 844 1006 1.87e-16 79.3
Msa0466740 MtrunA17_Chr5g0446871 35.294 153 78 6 37 182 26 164 4.50e-12 66.2
Msa0466740 MtrunA17_Chr3g0097651 36.975 119 40 1 79 162 520 638 2.36e-16 79.0
Msa0466740 MtrunA17_Chr3g0097651 37.333 150 80 6 1 146 1 140 1.35e-11 64.7
Msa0466740 MtrunA17_Chr2g0304271 39.456 147 71 5 104 233 73 218 2.80e-16 76.6
Msa0466740 MtrunA17_Chr5g0420311 29.688 192 97 6 13 167 14 204 4.12e-16 76.3
Msa0466740 MtrunA17_Chr3g0097471 37.419 155 85 6 1 148 2 151 1.15e-15 73.9
Msa0466740 MtrunA17_Chr1g0165191 33.333 177 97 4 1 167 1 166 1.28e-15 77.0
Msa0466740 MtrunA17_Chr4g0006901 33.758 157 84 3 67 212 503 650 1.34e-15 76.6
Msa0466740 MtrunA17_Chr5g0426041 32.990 194 105 5 99 277 792 975 1.37e-15 77.0
Msa0466740 MtrunA17_Chr2g0284771 36.283 113 61 2 89 190 504 616 1.67e-15 76.6
Msa0466740 MtrunA17_Chr2g0293591 36.184 152 78 4 85 225 786 929 1.74e-15 76.6
Msa0466740 MtrunA17_Chr8g0353761 49.438 89 30 3 135 212 1 85 1.80e-15 70.1
Msa0466740 MtrunA17_Chr7g0222841 30.332 211 102 9 19 194 19 219 1.81e-15 73.9
Msa0466740 MtrunA17_Chr4g0022041 32.386 176 92 6 1 153 1 172 2.44e-15 75.9
Msa0466740 MtrunA17_Chr3g0097571 36.913 149 60 6 101 245 160 278 2.58e-15 74.7
Msa0466740 MtrunA17_Chr1g0190411 32.941 170 90 5 79 233 494 654 2.71e-15 75.9
Msa0466740 MtrunA17_Chr2g0317591 58.333 60 25 0 103 162 286 345 2.87e-15 75.1
Msa0466740 MtrunA17_Chr5g0440141 36.364 143 76 4 103 231 905 1046 2.93e-15 75.9
Msa0466740 MtrunA17_Chr7g0215171 28.571 196 101 6 35 194 30 222 3.21e-15 73.2
Msa0466740 MtrunA17_Chr1g0165971 36.250 160 90 5 1 159 1 149 4.27e-15 75.5
Msa0466740 MtrunA17_Chr4g0014151 42.718 103 49 1 99 191 898 1000 5.52e-15 75.1
Msa0466740 MtrunA17_Chr5g0439921 36.957 138 67 4 103 229 836 964 6.17e-15 75.1
Msa0466740 MtrunA17_Chr8g0345561 37.705 122 62 2 80 191 582 699 7.02e-15 74.7
Msa0466740 MtrunA17_Chr4g0006961 37.209 129 62 3 73 191 511 630 1.04e-14 74.3
Msa0466740 MtrunA17_Chr3g0087421 33.742 163 96 5 1 162 1 152 1.47e-14 73.6
Msa0466740 MtrunA17_Chr4g0006941 35.252 139 77 3 87 212 798 936 1.85e-14 73.6
Msa0466740 MtrunA17_Chr3g0087631 32.484 157 92 3 92 234 800 956 2.06e-14 73.6
Msa0466740 MtrunA17_Chr3g0079661 41.509 106 52 1 104 199 712 817 2.06e-14 73.6
Msa0466740 MtrunA17_Chr4g0024381 39.796 98 49 1 103 190 55 152 2.07e-14 69.3
Msa0466740 MtrunA17_Chr8g0360851 30.508 177 101 5 41 198 488 661 2.28e-14 73.2
Msa0466740 MtrunA17_Chr7g0241441 41.905 105 50 2 99 192 990 1094 3.26e-14 72.8
Msa0466740 MtrunA17_Chr1g0203251 44.444 99 44 2 104 191 975 1073 3.57e-14 72.8
Msa0466740 MtrunA17_Chr2g0298631 37.838 111 63 2 14 124 12 116 3.63e-14 68.9
Msa0466740 MtrunA17_Chr1g0197951 60.784 51 20 0 103 153 164 214 3.81e-14 70.1
Msa0466740 MtrunA17_Chr5g0446091 35.821 134 67 3 103 225 115 240 4.26e-14 71.2
Msa0466740 MtrunA17_Chr1g0165221 29.536 237 143 7 34 257 29 254 5.00e-14 72.4
Msa0466740 MtrunA17_Chr3g0129391 33.846 130 76 1 104 223 666 795 5.04e-14 72.4
Msa0466740 MtrunA17_Chr5g0445711 36.885 122 67 1 80 191 154 275 5.13e-14 71.2
Msa0466740 MtrunA17_Chr4g0006861 37.607 117 61 2 87 191 826 942 5.21e-14 72.0
Msa0466740 MtrunA17_Chr5g0446021 35.821 134 67 3 103 225 854 979 6.65e-14 72.0
Msa0466740 MtrunA17_Chr4g0006421 34.437 151 79 4 73 212 830 971 7.08e-14 71.6
Msa0466740 MtrunA17_Chr6g0465141 35.075 134 76 4 37 162 33 163 7.22e-14 70.1
Msa0466740 MtrunA17_Chr4g0004161 47.059 102 43 2 104 194 899 1000 7.97e-14 71.6
Msa0466740 MtrunA17_Chr4g0004161 31.126 151 77 2 37 162 21 169 5.96e-13 68.9
Msa0466740 MtrunA17_Chr5g0440201 38.060 134 63 4 103 225 838 962 8.99e-14 71.6
Msa0466740 MtrunA17_Chr6g0455691 35.135 148 78 4 101 247 752 882 9.53e-14 71.2
Msa0466740 MtrunA17_Chr6g0455691 34.722 144 76 4 37 180 31 156 2.73e-13 70.1
Msa0466740 MtrunA17_Chr7g0231531 40.000 120 66 4 40 159 42 155 1.07e-13 70.9
Msa0466740 MtrunA17_Chr5g0435341 32.680 153 75 4 79 225 656 786 1.07e-13 71.2
Msa0466740 MtrunA17_Chr5g0403401 33.721 172 92 7 9 169 3 163 1.41e-13 70.9
Msa0466740 MtrunA17_Chr4g0032101 36.567 134 65 4 103 225 837 961 1.48e-13 70.9
Msa0466740 MtrunA17_Chr4g0032101 34.286 140 76 3 37 163 32 168 7.80e-11 62.8
Msa0466740 MtrunA17_Chr7g0222901 30.189 212 103 10 19 194 19 221 1.51e-13 68.6
Msa0466740 MtrunA17_Chr1g0165881 28.788 198 105 6 1 167 1 193 1.54e-13 68.6
Msa0466740 MtrunA17_Chr5g0435331 32.680 153 75 4 79 225 845 975 1.75e-13 70.5
Msa0466740 MtrunA17_Chr5g0446881 39.091 110 57 1 92 191 170 279 2.08e-13 69.3
Msa0466740 MtrunA17_Chr7g0232131 40.000 120 66 4 40 159 42 155 2.31e-13 70.5
Msa0466740 MtrunA17_Chr1g0165901 30.890 191 93 6 8 167 72 254 2.44e-13 70.1
Msa0466740 MtrunA17_Chr6g0455761 37.903 124 69 3 37 160 31 146 2.48e-13 70.1
Msa0466740 MtrunA17_Chr5g0440151 35.338 133 67 2 103 225 833 956 2.64e-13 70.1
Msa0466740 MtrunA17_Chr5g0440151 34.286 140 76 4 37 163 32 168 8.43e-11 62.4
Msa0466740 MtrunA17_Chr4g0003071 37.000 100 53 1 104 193 15 114 2.74e-13 67.0
Msa0466740 MtrunA17_Chr7g0232451 32.432 148 78 2 35 162 47 192 2.76e-13 70.1
Msa0466740 MtrunA17_Chr2g0304281 36.646 161 82 6 17 162 14 169 2.77e-13 70.1
Msa0466740 MtrunA17_Chr5g0440011 35.664 143 77 4 103 231 839 980 2.83e-13 70.1
Msa0466740 MtrunA17_Chr5g0440011 35.032 157 81 5 37 175 32 185 8.70e-13 68.6
Msa0466740 MtrunA17_Chr5g0439791 41.414 99 48 1 103 191 834 932 2.90e-13 70.1
Msa0466740 MtrunA17_Chr5g0439791 33.566 143 75 4 37 163 26 164 3.45e-11 63.5
Msa0466740 MtrunA17_Chr1g0165951 30.857 175 94 3 8 162 4 171 2.95e-13 70.1
Msa0466740 MtrunA17_Chr7g0232211 41.026 117 63 4 43 159 36 146 3.14e-13 69.7
Msa0466740 MtrunA17_Chr1g0165271 36.232 138 79 3 28 162 23 154 3.21e-13 69.3
Msa0466740 MtrunA17_Chr7g0222861 29.469 207 101 9 23 194 23 219 3.31e-13 67.4
Msa0466740 MtrunA17_Chr5g0440031 35.664 143 77 4 103 231 882 1023 3.43e-13 69.7
Msa0466740 MtrunA17_Chr5g0439821 34.965 143 78 4 103 231 898 1039 4.03e-13 69.7
Msa0466740 MtrunA17_Chr1g0165231 36.232 138 79 3 28 162 23 154 4.16e-13 69.7
Msa0466740 MtrunA17_Chr1g0165301 36.232 138 79 3 28 162 23 154 4.16e-13 69.7
Msa0466740 MtrunA17_Chr4g0051961 36.154 130 67 3 76 189 658 787 5.10e-13 69.3
Msa0466740 MtrunA17_Chr5g0446201 33.083 133 76 4 37 160 63 191 5.52e-13 67.0
Msa0466740 MtrunA17_Chr4g0012841 36.522 115 66 3 40 153 29 137 5.62e-13 68.9
Msa0466740 MtrunA17_Chr4g0006931 34.884 129 65 2 73 191 86 205 6.06e-13 67.8
Msa0466740 MtrunA17_Chr7g0245171 29.756 205 88 9 41 194 29 228 6.56e-13 68.6
Msa0466740 MtrunA17_Chr5g0440161 37.313 134 64 4 103 225 878 1002 7.23e-13 68.9
Msa0466740 MtrunA17_Chr5g0440161 34.286 140 76 4 37 163 32 168 5.07e-11 63.2
Msa0466740 MtrunA17_Chr7g0241491 35.714 154 77 4 99 232 940 1091 7.26e-13 68.9
Msa0466740 MtrunA17_Chr5g0439811 33.775 151 85 4 95 231 721 870 7.87e-13 68.6
Msa0466740 MtrunA17_Chr6g0455731 41.176 119 53 4 67 173 730 843 7.96e-13 68.6
Msa0466740 MtrunA17_Chr6g0455731 33.735 166 86 7 3 162 5 152 6.02e-12 65.9
Msa0466740 MtrunA17_Chr5g0408621 33.099 142 79 3 38 169 75 210 8.78e-13 68.6
Msa0466740 MtrunA17_Chr1g0212351 31.507 146 84 4 65 194 443 588 8.92e-13 68.2
Msa0466740 MtrunA17_Chr1g0212351 25.481 208 90 5 10 159 7 207 2.54e-11 63.9
Msa0466740 MtrunA17_Chr2g0291771 34.351 131 71 3 79 194 473 603 9.40e-13 68.6
Msa0466740 MtrunA17_Chr8g0351951 35.115 131 70 2 79 194 235 365 9.48e-13 67.8
Msa0466740 MtrunA17_Chr5g0439931 35.915 142 69 5 114 244 20 150 9.70e-13 65.1
Msa0466740 MtrunA17_Chr8g0363501 32.090 134 73 3 79 194 36 169 9.76e-13 68.2
Msa0466740 MtrunA17_Chr5g0436591 33.083 133 67 3 32 159 35 150 9.98e-13 66.6
Msa0466740 MtrunA17_Chr7g0216801 34.375 160 77 6 99 246 761 904 1.01e-12 68.2
Msa0466740 MtrunA17_Chr1g0169841 35.766 137 71 4 79 198 594 730 1.08e-12 68.2
Msa0466740 MtrunA17_Chr7g0222871 29.245 212 105 10 19 194 19 221 1.08e-12 65.9
Msa0466740 MtrunA17_Chr1g0202001 32.597 181 105 7 8 178 46 219 1.19e-12 68.2
Msa0466740 MtrunA17_Chr7g0257621 27.041 196 106 6 76 254 381 556 1.31e-12 67.8
Msa0466740 MtrunA17_Chr3g0097511 39.583 96 50 4 19 114 17 104 1.32e-12 63.9
Msa0466740 MtrunA17_Chr4g0023641 41.739 115 55 4 37 146 34 141 1.40e-12 66.6
Msa0466740 MtrunA17_Chr3g0097681 30.811 185 72 7 21 153 20 200 1.42e-12 67.0
Msa0466740 MtrunA17_Chr8g0363281 29.050 179 100 5 79 230 315 493 1.65e-12 67.8
Msa0466740 MtrunA17_Chr3g0097271 38.281 128 67 5 21 144 20 139 2.06e-12 66.6
Msa0466740 MtrunA17_Chr8g0362941 32.090 134 73 3 79 194 256 389 2.08e-12 67.4
Msa0466740 MtrunA17_Chr2g0284121 30.114 176 101 5 41 197 692 864 2.24e-12 67.4
Msa0466740 MtrunA17_Chr7g0216661 38.835 103 53 1 99 191 337 439 2.43e-12 67.0
Msa0466740 MtrunA17_Chr8g0363111 34.146 123 66 2 83 190 504 626 2.44e-12 67.0
Msa0466740 MtrunA17_Chr4g0019861 34.932 146 65 5 33 151 25 167 2.61e-12 67.0
Msa0466740 MtrunA17_Chr7g0222881 29.245 212 105 10 19 194 19 221 2.79e-12 64.7
Msa0466740 MtrunA17_Chr4g0024361 36.567 134 65 4 103 225 878 1002 2.82e-12 67.0
Msa0466740 MtrunA17_Chr8g0363241 32.090 134 73 3 79 194 258 391 3.04e-12 66.6
Msa0466740 MtrunA17_Chr1g0201241 36.752 117 61 2 50 162 35 142 3.22e-12 67.0
Msa0466740 MtrunA17_Chr4g0019801 33.962 159 66 6 28 151 21 175 3.48e-12 66.6
Msa0466740 MtrunA17_Chr6g0464831 37.931 116 62 4 37 144 10 123 3.87e-12 64.7
Msa0466740 MtrunA17_Chr1g0165141 37.748 151 81 7 16 162 14 155 3.99e-12 66.6
Msa0466740 MtrunA17_Chr8g0363691 32.090 134 73 3 79 194 764 897 4.02e-12 66.6
Msa0466740 MtrunA17_Chr1g0204461 34.127 126 76 2 39 162 39 159 4.07e-12 66.6
Msa0466740 MtrunA17_Chr5g0441511 44.898 98 44 1 104 191 75 172 4.87e-12 63.5
Msa0466740 MtrunA17_Chr8g0362981 30.657 137 77 3 79 197 256 392 5.22e-12 66.2
Msa0466740 MtrunA17_Chr6g0465221 42.500 80 44 1 71 150 49 126 5.66e-12 62.0
Msa0466740 MtrunA17_Chr4g0051281 30.128 156 82 5 33 164 28 180 5.83e-12 65.1
Msa0466740 MtrunA17_Chr4g0007471 38.583 127 63 4 111 228 279 399 6.36e-12 65.5
Msa0466740 MtrunA17_Chr4g0050731 39.506 81 36 2 128 195 7 87 7.29e-12 60.5
Msa0466740 MtrunA17_Chr6g0455681 34.400 125 76 4 37 160 31 150 7.55e-12 64.3
Msa0466740 MtrunA17_Chr2g0296601 28.859 149 84 3 37 163 20 168 8.61e-12 65.5
Msa0466740 MtrunA17_Chr4g0006451 33.333 135 68 4 73 197 417 539 8.97e-12 65.1
Msa0466740 MtrunA17_Chr5g0446891 36.434 129 74 3 37 160 66 191 9.64e-12 65.1
Msa0466740 MtrunA17_Chr3g0123891 31.609 174 88 5 44 189 32 202 1.03e-11 65.1
Msa0466740 MtrunA17_Chr5g0440101 36.567 134 65 4 103 225 884 1008 1.05e-11 65.5
Msa0466740 MtrunA17_Chr5g0413291 28.221 163 85 5 54 188 46 204 1.10e-11 65.1
Msa0466740 MtrunA17_Chr8g0363061 31.387 137 76 3 79 197 496 632 1.12e-11 65.1
Msa0466740 MtrunA17_Chr3g0142271 34.848 132 70 3 76 191 618 749 1.16e-11 65.1
Msa0466740 MtrunA17_Chr4g0007551 44.330 97 44 1 104 190 442 538 1.18e-11 65.1
Msa0466740 MtrunA17_Chr5g0398441 34.146 123 62 2 76 193 395 503 1.22e-11 65.1
Msa0466740 MtrunA17_Chr2g0278851 33.103 145 77 3 54 186 49 185 1.22e-11 64.7
Msa0466740 MtrunA17_Chr5g0423121 29.000 200 92 7 41 194 29 224 1.23e-11 64.7
Msa0466740 MtrunA17_Chr7g0250401 33.333 135 70 3 37 153 24 156 1.25e-11 64.7
Msa0466740 MtrunA17_Chr8g0372861 37.736 106 55 2 104 198 712 817 1.34e-11 65.1
Msa0466740 MtrunA17_Chr2g0283921 35.849 106 57 2 104 198 712 817 1.37e-11 64.7
Msa0466740 MtrunA17_Chr8g0363601 33.077 130 69 3 83 194 294 423 1.47e-11 64.7
Msa0466740 MtrunA17_Chr5g0408611 30.588 170 98 5 9 168 3 162 1.61e-11 64.7
Msa0466740 MtrunA17_Chr7g0250381 31.783 129 79 3 38 164 22 143 1.72e-11 64.7
Msa0466740 MtrunA17_Chr1g0165161 34.437 151 88 4 16 162 4 147 1.83e-11 62.0
Msa0466740 MtrunA17_Chr7g0215761 36.719 128 66 3 103 215 776 903 1.89e-11 64.3
Msa0466740 MtrunA17_Chr7g0215761 33.824 136 77 5 37 163 30 161 4.19e-11 63.5
Msa0466740 MtrunA17_Chr2g0296591 28.859 149 84 3 37 163 20 168 1.94e-11 64.7
Msa0466740 MtrunA17_Chr1g0165281 37.815 119 69 3 44 162 72 185 2.02e-11 64.3
Msa0466740 MtrunA17_Chr1g0165241 37.815 119 69 3 44 162 72 185 2.02e-11 64.3
Msa0466740 MtrunA17_Chr1g0165311 37.815 119 69 3 44 162 72 185 2.02e-11 64.3
Msa0466740 MtrunA17_Chr1g0165211 34.899 149 80 4 35 172 26 168 2.05e-11 64.3
Msa0466740 MtrunA17_Chr4g0013491 28.977 176 103 5 41 197 220 392 2.11e-11 64.3
Msa0466740 MtrunA17_Chr3g0113221 31.081 148 84 3 29 159 25 171 2.29e-11 64.3
Msa0466740 MtrunA17_Chr8g0362931 33.077 130 69 3 83 194 689 818 2.29e-11 64.3
Msa0466740 MtrunA17_Chr7g0216761 37.864 103 54 1 99 191 94 196 2.42e-11 62.8
Msa0466740 MtrunA17_Chr4g0019841 33.939 165 90 7 11 162 12 170 2.48e-11 63.9
Msa0466740 MtrunA17_Chr5g0437741 31.548 168 81 6 64 204 231 391 2.87e-11 63.9
Msa0466740 MtrunA17_Chr3g0127701 30.818 159 79 5 38 167 24 180 2.89e-11 63.9
Msa0466740 MtrunA17_Chr7g0232171 37.815 119 68 4 41 159 43 155 3.03e-11 63.9
Msa0466740 MtrunA17_Chr6g0478111 33.566 143 76 5 70 195 499 639 3.34e-11 63.9
Msa0466740 MtrunA17_Chr3g0087811 25.628 199 80 4 37 168 24 221 3.56e-11 63.2
Msa0466740 MtrunA17_Chr2g0284191 30.000 140 80 3 76 197 359 498 3.68e-11 63.5
Msa0466740 MtrunA17_Chr3g0127671 30.818 159 79 5 38 167 66 222 3.84e-11 63.5
Msa0466740 MtrunA17_Chr7g0216701 34.337 166 87 5 99 254 749 902 4.02e-11 63.5
Msa0466740 MtrunA17_Chr7g0216641 37.864 103 54 1 99 191 744 846 4.34e-11 63.5
Msa0466740 MtrunA17_Chr4g0058761 34.559 136 72 3 44 169 33 161 4.46e-11 63.5
Msa0466740 MtrunA17_Chr8g0362431 32.308 130 70 3 83 194 302 431 4.63e-11 63.2
Msa0466740 MtrunA17_Chr3g0095201 31.915 141 78 3 76 198 501 641 4.64e-11 63.2
Msa0466740 MtrunA17_Chr7g0258411 33.333 111 56 2 61 153 35 145 4.81e-11 62.0
Msa0466740 MtrunA17_Chr2g0282831 34.127 126 68 3 84 195 465 589 5.45e-11 63.2
Msa0466740 MtrunA17_Chr4g0007131 30.263 228 138 9 22 243 13 225 5.83e-11 62.8
Msa0466740 MtrunA17_Chr4g0007171 31.875 160 99 5 11 167 5 157 5.86e-11 59.7
Msa0466740 MtrunA17_Chr8g0363001 25.991 227 117 8 13 208 8 214 5.97e-11 61.2
Msa0466740 MtrunA17_Chr4g0022061 34.483 116 72 3 37 151 60 172 6.53e-11 62.4
Msa0466740 MtrunA17_Chr1g0159861 27.811 169 102 3 4 153 5 172 6.59e-11 60.1
Msa0466740 MtrunA17_Chr7g0250351 28.378 148 74 3 38 153 22 169 6.78e-11 62.8
Msa0466740 MtrunA17_Chr6g0455791 37.069 116 68 3 60 174 122 233 8.42e-11 61.6
Msa0466740 MtrunA17_Chr7g0216791 34.286 140 79 5 33 163 9 144 8.64e-11 61.6
Msa0466740 MtrunA17_Chr8g0367351 28.931 159 93 3 14 153 11 168 8.86e-11 62.4
Msa0466740 MtrunA17_Chr8g0380941 31.944 144 75 5 41 162 37 179 9.10e-11 62.4
Msa0466740 MtrunA17_Chr7g0216781 36.893 103 55 1 99 191 266 368 9.20e-11 62.0
Msa0466740 MtrunA17_Chr8g0362871 34.545 110 59 2 101 197 317 426 9.77e-11 62.4
Msa0466740 MtrunA17_Chr8g0363401 31.579 133 73 3 83 197 309 441 9.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466740 AT2G01950.1 42.308 104 50 1 103 196 626 729 4.75e-18 84.7
Msa0466740 AT3G05660.1 44.444 108 50 1 97 194 696 803 1.17e-17 83.6
Msa0466740 AT5G23400.1 37.671 146 75 4 65 194 439 584 2.15e-17 82.4
Msa0466740 AT1G31420.1 28.395 243 128 8 41 253 33 259 8.20e-17 80.9
Msa0466740 AT1G31420.3 28.395 243 128 8 41 253 33 259 8.20e-17 80.9
Msa0466740 AT1G31420.2 28.395 243 128 8 41 253 33 259 8.74e-17 80.5
Msa0466740 AT4G13920.1 42.056 107 52 1 95 191 720 826 1.32e-16 80.5
Msa0466740 AT1G74190.1 33.537 164 92 5 103 255 794 951 1.62e-16 80.1
Msa0466740 AT2G34930.1 34.839 155 58 4 79 192 745 897 6.26e-16 78.2
Msa0466740 AT3G24982.1 43.925 107 50 1 95 191 740 846 7.85e-16 78.2
Msa0466740 AT1G45616.1 41.818 110 54 1 92 191 808 917 9.66e-16 77.8
Msa0466740 AT1G47890.1 41.593 113 55 2 95 196 838 950 1.33e-15 77.4
Msa0466740 AT4G13880.1 38.938 113 59 1 89 191 556 668 1.55e-15 77.0
Msa0466740 AT3G24900.1 42.991 107 51 1 95 191 709 815 2.20e-15 76.6
Msa0466740 AT3G24900.2 42.991 107 51 1 95 191 740 846 2.31e-15 76.6
Msa0466740 AT3G25020.1 42.991 107 51 1 95 191 707 813 2.97e-15 76.3
Msa0466740 AT4G39400.1 40.196 102 51 1 104 195 670 771 3.56e-15 76.3
Msa0466740 AT2G33060.1 43.925 107 50 1 95 191 609 715 3.58e-15 75.9
Msa0466740 AT2G32660.1 43.925 107 50 1 95 191 414 520 6.64e-15 75.1
Msa0466740 AT2G32660.2 43.925 107 50 1 95 191 596 702 8.67e-15 74.7
Msa0466740 AT3G25010.1 42.056 107 52 1 95 191 708 814 1.25e-14 74.3
Msa0466740 AT3G25010.2 42.056 107 52 1 95 191 739 845 1.42e-14 74.3
Msa0466740 AT4G13810.3 39.252 107 55 1 95 191 453 559 1.49e-14 73.9
Msa0466740 AT4G13810.1 39.252 107 55 1 95 191 359 465 1.50e-14 73.9
Msa0466740 AT4G13810.2 38.053 113 60 1 89 191 529 641 1.55e-14 73.9
Msa0466740 AT4G13810.2 35.185 108 66 2 55 162 56 159 5.32e-12 66.6
Msa0466740 AT1G07390.1 42.857 98 46 1 103 190 850 947 1.83e-14 73.9
Msa0466740 AT1G07390.3 42.857 98 46 1 103 190 899 996 1.84e-14 73.9
Msa0466740 AT1G74170.2 32.143 168 93 7 101 255 860 1019 1.90e-14 73.9
Msa0466740 AT1G07390.2 42.857 98 46 1 103 190 729 826 1.95e-14 73.9
Msa0466740 AT1G74170.1 32.143 168 93 7 101 255 792 951 1.96e-14 73.9
Msa0466740 AT1G07390.5 42.857 98 46 1 103 190 864 961 2.06e-14 73.9
Msa0466740 AT1G07390.4 42.857 98 46 1 103 190 893 990 2.11e-14 73.9
Msa0466740 AT2G33020.1 41.121 107 53 1 95 191 696 802 2.92e-14 73.2
Msa0466740 AT4G37250.1 27.807 187 103 4 17 175 5 187 3.38e-14 73.2
Msa0466740 AT3G05360.1 31.551 187 102 7 10 178 13 191 5.27e-14 72.4
Msa0466740 AT5G40170.1 37.879 132 67 3 83 204 610 736 5.58e-14 72.4
Msa0466740 AT3G05650.1 41.748 103 50 1 99 191 687 789 5.96e-14 72.4
Msa0466740 AT2G26380.1 25.789 190 103 5 15 169 9 195 7.92e-14 71.6
Msa0466740 AT1G33670.1 29.240 171 90 5 21 163 12 179 8.34e-14 71.6
Msa0466740 AT2G33170.2 36.842 133 68 3 79 195 599 731 9.00e-14 72.0
Msa0466740 AT2G33170.1 36.842 133 68 3 79 195 599 731 9.00e-14 72.0
Msa0466740 AT2G01210.1 34.109 129 68 2 44 155 27 155 9.32e-14 71.6
Msa0466740 AT5G67280.1 26.875 160 93 3 15 155 13 167 9.92e-14 71.6
Msa0466740 AT2G33050.1 41.121 107 53 1 95 191 599 705 1.04e-13 71.6
Msa0466740 AT5G25910.1 42.857 105 50 1 97 191 635 739 1.08e-13 71.6
Msa0466740 AT2G32680.1 39.048 105 54 1 97 191 709 813 1.18e-13 71.6
Msa0466740 AT2G33030.1 40.952 105 52 1 97 191 44 148 1.19e-13 68.9
Msa0466740 AT5G49290.7 32.530 166 84 7 104 253 707 860 1.62e-13 71.2
Msa0466740 AT5G49290.1 32.530 166 84 7 104 253 735 888 1.68e-13 71.2
Msa0466740 AT1G33610.1 27.320 194 103 5 11 169 4 194 1.74e-13 70.5
Msa0466740 AT5G49290.4 32.530 166 84 7 104 253 760 913 1.77e-13 70.9
Msa0466740 AT5G49290.6 32.530 166 84 7 104 253 760 913 1.77e-13 70.9
Msa0466740 AT5G49290.8 32.530 166 84 7 104 253 760 913 1.77e-13 70.9
Msa0466740 AT5G49290.2 32.530 166 84 7 104 253 774 927 1.85e-13 70.9
Msa0466740 AT5G49290.5 32.530 166 84 7 104 253 732 885 1.90e-13 70.9
Msa0466740 AT5G53890.1 33.908 174 89 4 104 265 552 711 2.01e-13 70.9
Msa0466740 AT5G49290.9 32.530 166 84 7 104 253 517 670 2.69e-13 70.5
Msa0466740 AT2G25440.1 42.857 98 46 1 104 191 505 602 4.22e-13 69.7
Msa0466740 AT1G55610.1 42.574 101 48 1 104 194 655 755 4.61e-13 69.7
Msa0466740 AT1G55610.2 42.574 101 48 1 104 194 655 755 4.61e-13 69.7
Msa0466740 AT1G74180.2 40.206 97 48 1 104 190 785 881 4.63e-13 69.7
Msa0466740 AT1G74180.1 40.206 97 48 1 104 190 799 895 4.64e-13 69.7
Msa0466740 AT2G15080.1 38.261 115 60 2 92 195 798 912 4.92e-13 69.7
Msa0466740 AT2G15080.2 38.261 115 60 2 92 195 798 912 4.92e-13 69.7
Msa0466740 AT1G33590.1 27.149 221 116 8 12 204 4 207 5.84e-13 68.9
Msa0466740 AT1G33590.3 27.149 221 116 8 12 204 39 242 6.58e-13 68.9
Msa0466740 AT4G04220.1 42.574 101 47 2 99 188 653 753 6.88e-13 69.3
Msa0466740 AT5G65710.1 36.585 123 63 3 83 191 497 618 7.00e-13 69.3
Msa0466740 AT1G33590.2 27.149 221 116 8 12 204 41 244 7.16e-13 68.9
Msa0466740 AT1G71400.1 32.948 173 94 6 95 254 665 828 7.16e-13 69.3
Msa0466740 AT1G17250.1 34.286 140 78 4 104 231 601 738 8.88e-13 68.9
Msa0466740 AT2G15042.1 29.480 173 97 6 99 256 248 410 1.07e-12 68.2
Msa0466740 AT1G54475.1 40.206 97 48 1 104 190 36 132 1.20e-12 66.2
Msa0466740 AT1G66830.1 31.538 130 71 2 44 155 28 157 1.48e-12 68.2
Msa0466740 AT2G25470.3 39.175 97 49 1 104 190 805 901 1.50e-12 68.2
Msa0466740 AT3G47110.1 33.117 154 93 4 8 157 3 150 1.53e-12 68.2
Msa0466740 AT5G44700.1 30.128 156 71 4 79 196 706 861 1.55e-12 68.2
Msa0466740 AT2G25470.1 39.175 97 49 1 104 190 762 858 1.55e-12 68.2
Msa0466740 AT1G17230.3 33.083 133 73 3 79 195 581 713 1.57e-12 68.2
Msa0466740 AT3G11010.6 41.905 105 51 1 97 191 679 783 1.60e-12 68.2
Msa0466740 AT3G11010.1 41.905 105 51 1 97 191 712 816 1.65e-12 68.2
Msa0466740 AT3G11010.3 41.121 107 53 1 95 191 749 855 1.68e-12 68.2
Msa0466740 AT3G11010.3 28.571 161 77 4 37 162 38 195 2.21e-11 64.7
Msa0466740 AT3G11010.5 41.905 105 51 1 97 191 688 792 1.68e-12 68.2
Msa0466740 AT1G17230.2 33.083 133 73 3 79 195 581 713 1.71e-12 68.2
Msa0466740 AT3G11010.2 41.905 105 51 1 97 191 775 879 1.71e-12 68.2
Msa0466740 AT3G11010.4 41.121 107 53 1 95 191 740 846 1.76e-12 68.2
Msa0466740 AT1G17230.1 33.083 133 73 3 79 195 581 713 1.81e-12 68.2
Msa0466740 AT1G72300.1 40.594 101 50 1 101 191 594 694 1.86e-12 68.2
Msa0466740 AT1G33600.1 27.411 197 92 4 15 163 8 201 2.45e-12 67.4
Msa0466740 AT1G33600.2 27.411 197 92 4 15 163 8 201 2.45e-12 67.4
Msa0466740 AT3G53240.1 36.134 119 65 2 104 212 718 835 2.50e-12 67.4
Msa0466740 AT3G53240.3 36.134 119 65 2 104 212 718 835 2.50e-12 67.4
Msa0466740 AT3G53240.2 36.134 119 65 2 104 212 754 871 2.50e-12 67.4
Msa0466740 AT1G48480.1 27.273 209 90 7 41 197 36 234 3.27e-12 67.0
Msa0466740 AT5G46330.2 35.156 128 67 4 82 193 662 789 3.56e-12 67.0
Msa0466740 AT5G46330.2 35.514 107 57 2 75 176 174 273 4.60e-11 63.9
Msa0466740 AT5G46330.1 35.156 128 67 4 82 193 662 789 3.56e-12 67.0
Msa0466740 AT5G46330.1 35.514 107 57 2 75 176 174 273 4.60e-11 63.9
Msa0466740 AT3G05370.1 31.579 171 78 7 36 168 29 198 5.60e-12 66.6
Msa0466740 AT3G05370.1 35.514 107 59 1 92 188 671 777 2.64e-11 64.3
Msa0466740 AT3G02880.1 27.869 244 118 7 39 231 27 263 5.84e-12 66.2
Msa0466740 AT5G56040.2 39.423 104 52 3 54 154 43 138 6.15e-12 66.2
Msa0466740 AT1G08590.1 32.867 143 81 3 79 206 494 636 6.42e-12 66.2
Msa0466740 AT5G56040.1 39.423 104 52 3 54 154 43 138 6.66e-12 66.2
Msa0466740 AT4G18640.1 35.714 112 64 3 43 153 31 135 6.84e-12 66.2
Msa0466740 AT1G25320.1 35.156 128 65 3 44 153 29 156 7.74e-12 65.9
Msa0466740 AT3G13380.1 41.584 101 49 1 104 194 655 755 9.94e-12 65.9
Msa0466740 AT1G12460.2 32.283 127 71 2 80 191 228 354 1.10e-11 65.5
Msa0466740 AT3G17840.1 29.612 206 89 8 41 197 34 232 1.21e-11 65.5
Msa0466740 AT1G12460.1 32.283 127 71 2 80 191 367 493 1.28e-11 65.5
Msa0466740 AT5G01890.1 34.653 101 56 1 99 189 468 568 2.03e-11 64.7
Msa0466740 AT3G12610.1 25.683 183 79 2 37 162 27 209 2.04e-11 64.3
Msa0466740 AT1G71390.1 31.884 138 71 3 37 153 32 167 2.10e-11 64.7
Msa0466740 AT1G71390.2 31.884 138 71 3 37 153 37 172 2.11e-11 64.7
Msa0466740 AT1G62950.1 34.646 127 65 3 80 191 372 495 2.74e-11 64.3
Msa0466740 AT1G58190.1 28.846 156 85 6 103 236 761 912 3.04e-11 64.3
Msa0466740 AT4G20140.1 33.562 146 66 4 60 184 47 182 3.05e-11 64.3
Msa0466740 AT3G20820.1 33.588 131 71 3 79 194 233 362 3.26e-11 63.5
Msa0466740 AT1G74360.1 32.787 122 65 3 79 184 580 700 3.30e-11 64.3
Msa0466740 AT2G42290.1 27.143 140 85 2 44 166 30 169 3.61e-11 63.9
Msa0466740 AT2G41820.1 33.103 145 76 4 68 191 368 512 3.64e-11 63.9
Msa0466740 AT5G62230.2 36.792 106 61 2 58 162 45 145 4.06e-11 63.9
Msa0466740 AT5G62230.1 36.792 106 61 2 58 162 45 145 4.67e-11 63.5
Msa0466740 AT2G23300.1 31.884 138 72 3 45 162 38 173 4.69e-11 63.5
Msa0466740 AT1G67510.1 32.787 122 81 1 41 162 26 146 5.12e-11 63.5
Msa0466740 AT5G10020.1 33.083 133 78 4 34 159 18 146 5.50e-11 63.5
Msa0466740 AT5G10020.2 33.083 133 78 4 34 159 18 146 5.70e-11 63.5
Msa0466740 AT3G12145.1 34.109 129 71 4 37 162 24 141 6.40e-11 62.4
Msa0466740 AT4G22730.2 35.849 106 63 1 62 162 85 190 7.06e-11 62.8
Msa0466740 AT4G22730.1 35.849 106 63 1 62 162 85 190 7.68e-11 62.8
Msa0466740 AT3G47570.1 36.752 117 68 3 38 154 22 132 8.47e-11 62.8
Msa0466740 AT2G02220.1 31.034 174 98 6 28 200 22 174 8.78e-11 62.8

Find 74 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATTTGCAGTGGGTTTC+TGG 0.125463 3_3:+67698476 Msa0466740:intron
TAATCACGTGTTTGTGGTTT+TGG 0.161664 3_3:+67698558 Msa0466740:CDS
CAACTTTCACTTACGTCAAT+TGG 0.290050 3_3:-67698587 None:intergenic
GTGGTTCTCTATTCCTCAAC+AGG 0.299153 3_3:+67698506 Msa0466740:CDS
TTTCACAGTCACTCTACTTT+GGG 0.299417 3_3:+67698446 Msa0466740:CDS
TCCTGCTATGTTGGGAATCC+TGG 0.304672 3_3:+67698334 Msa0466740:CDS
CCTCCAGCATGCTTTCCTCT+TGG 0.340003 3_3:+67696163 Msa0466740:CDS
CTCTATTCCTCAACAGGGCT+TGG 0.346787 3_3:+67698512 Msa0466740:CDS
AAACCACAAACACGTGATTA+AGG 0.358004 3_3:-67698555 None:intergenic
AGTGATGTTACTTATGCATT+TGG 0.365907 3_3:-67697924 None:intergenic
GACAAAGTTGACGTGGTAAC+AGG 0.371931 3_3:-67698229 None:intergenic
TAATTAATATCAACCATGTT+AGG 0.373720 3_3:+67695982 None:intergenic
GAAAATAGAAGAAAGTTTAA+TGG 0.376333 3_3:+67698901 Msa0466740:CDS
GTTGGGAATCCTGGACTTTG+TGG 0.378841 3_3:+67698343 Msa0466740:CDS
GTGATGTTACTTATGCATTT+GGG 0.381567 3_3:-67697923 None:intergenic
CAGTCACTCTACTTTGGGTT+GGG 0.385070 3_3:+67698451 Msa0466740:CDS
GTTTAATGGCACTAAAACTT+GGG 0.397579 3_3:+67698915 Msa0466740:CDS
TTTCCAGCTGCATTCTGTCT+TGG 0.399018 3_3:-67698882 None:intergenic
TTCTCCAACAAGTTTATTGT+CGG 0.410001 3_3:-67698203 None:intergenic
TTGATGCTTCCTGCTATGTT+GGG 0.416328 3_3:+67698326 Msa0466740:CDS
CTTGGAGGCACACTTATTCT+CGG 0.420217 3_3:+67698530 Msa0466740:CDS
CTATCCGACAATAAACTTGT+TGG 0.425133 3_3:+67698199 Msa0466740:CDS
AGTTTAATGGCACTAAAACT+TGG 0.426971 3_3:+67698914 Msa0466740:CDS
CTTTGAAGTTGAGTCCCAAC+CGG 0.436280 3_3:-67698301 None:intergenic
ATAGAAGAAGCAGATTGAAT+AGG 0.442416 3_3:+67698954 Msa0466740:exon
GTTCCTTAATCACGTGTTTG+TGG 0.443187 3_3:+67698552 Msa0466740:CDS
ACAGTCACTCTACTTTGGGT+TGG 0.444875 3_3:+67698450 Msa0466740:CDS
GTGGGTTTCTGGTGTATTTG+TGG 0.455476 3_3:+67698487 Msa0466740:intron
GCATTGCTTCTCTTCAAACT+TGG 0.455507 3_3:+67696126 Msa0466740:CDS
TATGACTCATGATCACATAT+TGG 0.460335 3_3:-67698376 None:intergenic
CACTAAAACTTGGGGTAGAC+CGG 0.467111 3_3:+67698924 Msa0466740:CDS
CATTGCGTCCTCCTCCATCT+AGG 0.471886 3_3:-67698399 None:intergenic
TTTGATGCTTCCTGCTATGT+TGG 0.485378 3_3:+67698325 Msa0466740:CDS
GATCATGAGTCATACCTAGA+TGG 0.490038 3_3:+67698385 Msa0466740:CDS
TATTCCTCAACAGGGCTTGG+AGG 0.493881 3_3:+67698515 Msa0466740:CDS
TTCGAGTCAAGTTCAATGAC+TGG 0.506734 3_3:-67698114 None:intergenic
TCCAGGATTCCCAACATAGC+AGG 0.512128 3_3:-67698335 None:intergenic
TTGACTCGAAATCATTTCAC+AGG 0.515613 3_3:+67698127 Msa0466740:CDS
GGTCCAAGACAGAATGCAGC+TGG 0.516634 3_3:+67698879 Msa0466740:intron
GCTTCTCTTCAAACTTGGTG+TGG 0.527074 3_3:+67696131 Msa0466740:CDS
ACTAGATTGAAAACTTGTGC+GGG 0.529296 3_3:-67698085 None:intergenic
TTTGAAGTTGAGTCCCAACC+GGG 0.532723 3_3:-67698300 None:intergenic
TAATAGTAGTAGCGAAACAA+TGG 0.534966 3_3:-67696022 None:intergenic
GGACCAAGAGGAAAGCATGC+TGG 0.539160 3_3:-67696166 None:intergenic
GGACCTTCCTCAAGTGGTTG+CGG 0.550204 3_3:+67698975 Msa0466740:three_prime_UTR
CATAAGTAACATCACTGGCA+TGG 0.550885 3_3:+67697931 Msa0466740:CDS
TAGTTGGACAAATCCCGGTT+GGG 0.556636 3_3:+67698287 Msa0466740:intron
AATAGTAGTAGCGAAACAAT+GGG 0.559274 3_3:-67696021 None:intergenic
ATAAATGCCGCAACCACTTG+AGG 0.560600 3_3:-67698982 None:intergenic
TTACCTAGTTGGACAAATCC+CGG 0.560887 3_3:+67698282 Msa0466740:intron
AATAGTAGCAATACGCAGCT+TGG 0.562229 3_3:+67696075 Msa0466740:CDS
TGAATAGGACCTTCCTCAAG+TGG 0.562799 3_3:+67698969 Msa0466740:three_prime_UTR
TCATGATCACATATTGGTAG+AGG 0.564596 3_3:-67698370 None:intergenic
AGAGGAGCTCCACAAAGTCC+AGG 0.572409 3_3:-67698352 None:intergenic
ATAAGTAACATCACTGGCAT+GGG 0.573172 3_3:+67697932 Msa0466740:CDS
TGTCTACAACAATATTTGAA+AGG 0.575525 3_3:+67696049 Msa0466740:CDS
CTAGTTGGACAAATCCCGGT+TGG 0.594453 3_3:+67698286 Msa0466740:intron
AACTAGATTGAAAACTTGTG+CGG 0.594695 3_3:-67698086 None:intergenic
AAATGCATAAGTAACATCAC+TGG 0.596936 3_3:+67697926 Msa0466740:CDS
TGGTAGTAACTGCAATGAGA+AGG 0.598363 3_3:+67696095 Msa0466740:CDS
AGTAACATCACTGGCATGGG+AGG 0.599718 3_3:+67697935 Msa0466740:CDS
TGTGCCTCCAAGCCCTGTTG+AGG 0.602594 3_3:-67698519 None:intergenic
TGGTTCTCTATTCCTCAACA+GGG 0.609242 3_3:+67698507 Msa0466740:CDS
TTTAATGGCACTAAAACTTG+GGG 0.618827 3_3:+67698916 Msa0466740:CDS
CAGATTCAAGAAACTCAAGA+AGG 0.618918 3_3:-67698251 None:intergenic
TTGTGAAGTGAAGCCTAACA+TGG 0.622762 3_3:-67695995 None:intergenic
GAGTCATACCTAGATGGAGG+AGG 0.624078 3_3:+67698391 Msa0466740:CDS
ATGCCGCAACCACTTGAGGA+AGG 0.628839 3_3:-67698978 None:intergenic
GTTCAATGTGACAACATCAC+AGG 0.629334 3_3:+67696222 Msa0466740:CDS
GGAAAGATATCAAGAGACAT+CGG 0.639864 3_3:+67698148 Msa0466740:CDS
CATGAGTCATACCTAGATGG+AGG 0.641691 3_3:+67698388 Msa0466740:CDS
CTAGATTGAAAACTTGTGCG+GGG 0.655795 3_3:-67698084 None:intergenic
CAAGAAGGACAAAGTTGACG+TGG 0.660483 3_3:-67698236 None:intergenic
CCAAGAGGAAAGCATGCTGG+AGG 0.665812 3_3:-67696163 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAACAATTTTTTTCATTAA+TGG - chr3_3:67696190-67696209 None:intergenic 15.0%
!!! CATGAAAATTTAAAATATCT+TGG + chr3_3:67696870-67696889 Msa0466740:intron 15.0%
!! TAAATGTGATAAAGAAAATA+AGG - chr3_3:67698644-67698663 None:intergenic 15.0%
!!! ATGAAAAAAATTGTTGTTCA+TGG + chr3_3:67696193-67696212 Msa0466740:CDS 20.0%
!! TATTATTATGATCATGTGAT+TGG - chr3_3:67696380-67696399 None:intergenic 20.0%
!!! CTTTTAAAAAATTGAAGCTA+AGG - chr3_3:67696752-67696771 None:intergenic 20.0%
!!! CTTAGCTTCAATTTTTTAAA+AGG + chr3_3:67696750-67696769 Msa0466740:intron 20.0%
!!! ATTTCATTCAATCTTTTAAC+TGG + chr3_3:67697539-67697558 Msa0466740:intron 20.0%
!! AATTTGCAATTCATTCATAT+TGG + chr3_3:67697737-67697756 Msa0466740:intron 20.0%
!! ATTTCGAATTGTATACAAAA+GGG + chr3_3:67697987-67698006 Msa0466740:intron 20.0%
!! GAAAATAGAAGAAAGTTTAA+TGG + chr3_3:67698901-67698920 Msa0466740:CDS 20.0%
! TGTCTACAACAATATTTGAA+AGG + chr3_3:67696049-67696068 Msa0466740:CDS 25.0%
!! AAAAATTGTTGTTCATGGAA+AGG + chr3_3:67696198-67696217 Msa0466740:CDS 25.0%
! AGATTTGAGTGATGAAAATT+TGG - chr3_3:67696484-67696503 None:intergenic 25.0%
! TTAACAAACTCTTTGGTATT+TGG - chr3_3:67696776-67696795 None:intergenic 25.0%
! TTCGAAAACTTGAATCTTTA+AGG + chr3_3:67696799-67696818 Msa0466740:intron 25.0%
!!! ACTCTTTAATTTGAAGAGTT+TGG + chr3_3:67697013-67697032 Msa0466740:intron 25.0%
! GAATCCATATCAAATGAAAT+CGG - chr3_3:67697125-67697144 None:intergenic 25.0%
! CATTTGATATGGATTCTAAA+TGG + chr3_3:67697129-67697148 Msa0466740:intron 25.0%
! AGTTTAAGCAATACAATTCT+AGG + chr3_3:67697179-67697198 Msa0466740:intron 25.0%
! AAACTCAGAACTTCTATTTA+TGG + chr3_3:67697373-67697392 Msa0466740:intron 25.0%
! TTGTCACACAATTCTTTATT+TGG + chr3_3:67697455-67697474 Msa0466740:intron 25.0%
! GGAAAATAGTTTGGATTATT+TGG + chr3_3:67697514-67697533 Msa0466740:intron 25.0%
!!! GCAAATTTGTTATGTTTGAT+AGG - chr3_3:67697724-67697743 None:intergenic 25.0%
!! CTTTTGTATACAATTCGAAA+TGG - chr3_3:67697988-67698007 None:intergenic 25.0%
! CATTTCGAATTGTATACAAA+AGG + chr3_3:67697986-67698005 Msa0466740:intron 25.0%
!!! AGTGAAGTTTTTTGTATGAT+TGG + chr3_3:67698677-67698696 Msa0466740:intron 25.0%
AATAGTAGTAGCGAAACAAT+GGG - chr3_3:67696024-67696043 None:intergenic 30.0%
TAATAGTAGTAGCGAAACAA+TGG - chr3_3:67696025-67696044 None:intergenic 30.0%
!! TTTTTCATTAATGGACCAAG+AGG - chr3_3:67696181-67696200 None:intergenic 30.0%
ATTCAAGCTTAAGTCTAAGT+AGG - chr3_3:67696331-67696350 None:intergenic 30.0%
TACTTAGACTTAAGCTTGAA+TGG + chr3_3:67696330-67696349 Msa0466740:intron 30.0%
CATCATTAAAGGATAAGTCT+AGG - chr3_3:67696431-67696450 None:intergenic 30.0%
CAAGTGAAGATCATCATTAA+AGG - chr3_3:67696442-67696461 None:intergenic 30.0%
CTTTAATGATGATCTTCACT+TGG + chr3_3:67696440-67696459 Msa0466740:intron 30.0%
TTCACTTGGATAATCTTCAT+TGG + chr3_3:67696454-67696473 Msa0466740:intron 30.0%
! TTTGAAGGTTAATTTGACTG+AGG - chr3_3:67696512-67696531 None:intergenic 30.0%
TGATGCATGTAACATATCTA+TGG - chr3_3:67696556-67696575 None:intergenic 30.0%
AGTAAAACTCACATGCTTAA+CGG - chr3_3:67696628-67696647 None:intergenic 30.0%
ATTGAAGCTAAGGTCAATAT+GGG - chr3_3:67696742-67696761 None:intergenic 30.0%
AATTGAAGCTAAGGTCAATA+TGG - chr3_3:67696743-67696762 None:intergenic 30.0%
GAACTAAATGAATCTATTCC+TGG + chr3_3:67696834-67696853 Msa0466740:intron 30.0%
TAAATGAATCTATTCCTGGT+TGG + chr3_3:67696838-67696857 Msa0466740:intron 30.0%
! ATTAAAGAGTTTTCCAATGC+TGG - chr3_3:67697003-67697022 None:intergenic 30.0%
AATTTGAAGAGTTTGGTCAT+TGG + chr3_3:67697020-67697039 Msa0466740:intron 30.0%
! TGTTTCTAAACTAGAGAGAT+TGG - chr3_3:67697087-67697106 None:intergenic 30.0%
! TCTCTCTAGTTTAGAAACAT+TGG + chr3_3:67697088-67697107 Msa0466740:intron 30.0%
ATTCCTCCATTTCAATTGAA+CGG + chr3_3:67697152-67697171 Msa0466740:intron 30.0%
TATATCCATGTTGGAAACTT+AGG - chr3_3:67697206-67697225 None:intergenic 30.0%
CTTTGTGTATATATCCATGT+TGG - chr3_3:67697215-67697234 None:intergenic 30.0%
CAACATGGATATATACACAA+AGG + chr3_3:67697213-67697232 Msa0466740:intron 30.0%
! TGACATTTGCTGATATATGT+GGG - chr3_3:67697424-67697443 None:intergenic 30.0%
! ATGACATTTGCTGATATATG+TGG - chr3_3:67697425-67697444 None:intergenic 30.0%
ATCAGCAAATGTCATCTATT+TGG + chr3_3:67697430-67697449 Msa0466740:intron 30.0%
! TATTTTCCCTACCTAATTTG+TGG - chr3_3:67697502-67697521 None:intergenic 30.0%
ATTAGGTAGGGAAAATAGTT+TGG + chr3_3:67697505-67697524 Msa0466740:intron 30.0%
GCATATTATTCTCCATGAAA+AGG - chr3_3:67697607-67697626 None:intergenic 30.0%
ATGGAGAATAATATGCTAAC+TGG + chr3_3:67697611-67697630 Msa0466740:intron 30.0%
! CTTGTCTGGTAATTTTTCAT+TGG + chr3_3:67697697-67697716 Msa0466740:intron 30.0%
ATTGGAGAAAACAATTTCTC+TGG + chr3_3:67697755-67697774 Msa0466740:intron 30.0%
TATCTCATCACTGATACAAT+TGG + chr3_3:67697868-67697887 Msa0466740:intron 30.0%
TTTCCCACAATAAACTTTCA+GGG + chr3_3:67697894-67697913 Msa0466740:intron 30.0%
! GTGATGTTACTTATGCATTT+GGG - chr3_3:67697926-67697945 None:intergenic 30.0%
! AGTGATGTTACTTATGCATT+TGG - chr3_3:67697927-67697946 None:intergenic 30.0%
AAATGCATAAGTAACATCAC+TGG + chr3_3:67697926-67697945 Msa0466740:CDS 30.0%
GTATACAATTCGAAATGGAA+TGG - chr3_3:67697983-67698002 None:intergenic 30.0%
! GACTTAGAGTATTATGACAA+TGG + chr3_3:67698013-67698032 Msa0466740:intron 30.0%
AACTAGATTGAAAACTTGTG+CGG - chr3_3:67698089-67698108 None:intergenic 30.0%
TTCTCCAACAAGTTTATTGT+CGG - chr3_3:67698206-67698225 None:intergenic 30.0%
TATGACTCATGATCACATAT+TGG - chr3_3:67698379-67698398 None:intergenic 30.0%
! TTTTTGTATGATTGGTACCA+CGG + chr3_3:67698685-67698704 Msa0466740:intron 30.0%
! TTGTAATTTTGTCAAACCCA+CGG - chr3_3:67698711-67698730 None:intergenic 30.0%
! GTGTGGCTTTTACAAAATTA+CGG - chr3_3:67698741-67698760 None:intergenic 30.0%
AGTTTAATGGCACTAAAACT+TGG + chr3_3:67698914-67698933 Msa0466740:CDS 30.0%
GTTTAATGGCACTAAAACTT+GGG + chr3_3:67698915-67698934 Msa0466740:CDS 30.0%
TTTAATGGCACTAAAACTTG+GGG + chr3_3:67698916-67698935 Msa0466740:CDS 30.0%
!!! TGCTTCTTCTATTTTGATTC+CGG - chr3_3:67698946-67698965 None:intergenic 30.0%
ATAGAAGAAGCAGATTGAAT+AGG + chr3_3:67698954-67698973 Msa0466740:exon 30.0%
!! CGCATAACATTTTTAGACTT+TGG - chr3_3:67699073-67699092 None:intergenic 30.0%
TGATCTACACCAACAATACT+TGG + chr3_3:67696260-67696279 Msa0466740:intron 35.0%
! TTTCACCTTCCAAGTATTGT+TGG - chr3_3:67696272-67696291 None:intergenic 35.0%
ACCTTCAAAACCAAACAAAC+TGG + chr3_3:67696523-67696542 Msa0466740:intron 35.0%
! CTTAACGGATGCAAAGATAT+CGG - chr3_3:67696613-67696632 None:intergenic 35.0%
!! AATCAAAATGGTTTGCTGAG+AGG - chr3_3:67696671-67696690 None:intergenic 35.0%
CAGGTAATTCGGAATCAAAA+TGG - chr3_3:67696683-67696702 None:intergenic 35.0%
AAACAACCAAGCAGGTAATT+CGG - chr3_3:67696694-67696713 None:intergenic 35.0%
CGAAGACTTAACAAACTCTT+TGG - chr3_3:67696783-67696802 None:intergenic 35.0%
! AATCTATTCCTGGTTGGTTA+GGG + chr3_3:67696844-67696863 Msa0466740:intron 35.0%
! AGAGTTTTCCAAGAGATGAA+GGG - chr3_3:67696926-67696945 None:intergenic 35.0%
AATATTCCCGGTCAGAAAAT+CGG - chr3_3:67696976-67696995 None:intergenic 35.0%
!! TGCACCGATTTCATTTGATA+TGG + chr3_3:67697118-67697137 Msa0466740:intron 35.0%
TTCCTCCATTTCAATTGAAC+GGG + chr3_3:67697153-67697172 Msa0466740:intron 35.0%
CTTATCCCGTTCAATTGAAA+TGG - chr3_3:67697161-67697180 None:intergenic 35.0%
!! ATGGATGAAACTCTAGAGTT+AGG - chr3_3:67697260-67697279 None:intergenic 35.0%
! TCTAGAGTTTCATCCATAGA+TGG + chr3_3:67697263-67697282 Msa0466740:intron 35.0%
CCAAAATATGTCTCCATCTA+TGG - chr3_3:67697279-67697298 None:intergenic 35.0%
! CCATAGATGGAGACATATTT+TGG + chr3_3:67697276-67697295 Msa0466740:intron 35.0%
ATGGACCACAATAATTTCAG+AGG + chr3_3:67697392-67697411 Msa0466740:intron 35.0%
ACCACAATAATTTCAGAGGA+GGG + chr3_3:67697396-67697415 Msa0466740:intron 35.0%
! TAATTTGTGGCAGAACATAG+GGG - chr3_3:67697489-67697508 None:intergenic 35.0%
! CTAATTTGTGGCAGAACATA+GGG - chr3_3:67697490-67697509 None:intergenic 35.0%
TGGAGAAATTCCTGATTGTT+GGG + chr3_3:67697559-67697578 Msa0466740:intron 35.0%
! AGGCTTATCTTTCCTTTTCA+TGG + chr3_3:67697592-67697611 Msa0466740:intron 35.0%
GTTTATCGATCTCATAGCAT+TGG + chr3_3:67697658-67697677 Msa0466740:intron 35.0%
ATCATCACTTCCATACTATG+TGG - chr3_3:67697800-67697819 None:intergenic 35.0%
TTGAGATCAAACCAGTTTGA+AGG + chr3_3:67697821-67697840 Msa0466740:intron 35.0%
TTGGAATGTTACCTTCAAAC+TGG - chr3_3:67697835-67697854 None:intergenic 35.0%
CTTTCCCACAATAAACTTTC+AGG + chr3_3:67697893-67697912 Msa0466740:intron 35.0%
AGACCCTGAAAGTTTATTGT+GGG - chr3_3:67697900-67697919 None:intergenic 35.0%
TAGACCCTGAAAGTTTATTG+TGG - chr3_3:67697901-67697920 None:intergenic 35.0%
ATAAGTAACATCACTGGCAT+GGG + chr3_3:67697932-67697951 Msa0466740:CDS 35.0%
CTGATAAGTTGTTAGCTGAA+AGG - chr3_3:67698057-67698076 None:intergenic 35.0%
CTTTCAGCTAACAACTTATC+AGG + chr3_3:67698055-67698074 Msa0466740:intron 35.0%
ACTAGATTGAAAACTTGTGC+GGG - chr3_3:67698088-67698107 None:intergenic 35.0%
! TTGACTCGAAATCATTTCAC+AGG + chr3_3:67698127-67698146 Msa0466740:CDS 35.0%
GGAAAGATATCAAGAGACAT+CGG + chr3_3:67698148-67698167 Msa0466740:CDS 35.0%
CTATCCGACAATAAACTTGT+TGG + chr3_3:67698199-67698218 Msa0466740:CDS 35.0%
CAGATTCAAGAAACTCAAGA+AGG - chr3_3:67698254-67698273 None:intergenic 35.0%
TCATGATCACATATTGGTAG+AGG - chr3_3:67698373-67698392 None:intergenic 35.0%
! TTTTCACAGTCACTCTACTT+TGG + chr3_3:67698445-67698464 Msa0466740:CDS 35.0%
TTTCACAGTCACTCTACTTT+GGG + chr3_3:67698446-67698465 Msa0466740:CDS 35.0%
AAACCACAAACACGTGATTA+AGG - chr3_3:67698558-67698577 None:intergenic 35.0%
! TAATCACGTGTTTGTGGTTT+TGG + chr3_3:67698558-67698577 Msa0466740:CDS 35.0%
! AATCACGTGTTTGTGGTTTT+GGG + chr3_3:67698559-67698578 Msa0466740:CDS 35.0%
CAACTTTCACTTACGTCAAT+TGG - chr3_3:67698590-67698609 None:intergenic 35.0%
GGTTTGACAAAATTACAACG+AGG + chr3_3:67698713-67698732 Msa0466740:intron 35.0%
AAGTTGACAGAATAACAGTG+TGG - chr3_3:67698758-67698777 None:intergenic 35.0%
! TAACGACTTTTGTGATTGTC+AGG + chr3_3:67698858-67698877 Msa0466740:intron 35.0%
TTGTGAAGTGAAGCCTAACA+TGG - chr3_3:67695998-67696017 None:intergenic 40.0%
AATAGTAGCAATACGCAGCT+TGG + chr3_3:67696075-67696094 Msa0466740:CDS 40.0%
TGGTAGTAACTGCAATGAGA+AGG + chr3_3:67696095-67696114 Msa0466740:CDS 40.0%
GCATTGCTTCTCTTCAAACT+TGG + chr3_3:67696126-67696145 Msa0466740:CDS 40.0%
GTTCAATGTGACAACATCAC+AGG + chr3_3:67696222-67696241 Msa0466740:CDS 40.0%
CTACACCAACAATACTTGGA+AGG + chr3_3:67696264-67696283 Msa0466740:intron 40.0%
!!! GCCAGTTTGTTTGGTTTTGA+AGG - chr3_3:67696527-67696546 None:intergenic 40.0%
! TGGAATGAAGCCAGTTTGTT+TGG - chr3_3:67696536-67696555 None:intergenic 40.0%
TTGATTCCGAATTACCTGCT+TGG + chr3_3:67696685-67696704 Msa0466740:intron 40.0%
! GAATCTATTCCTGGTTGGTT+AGG + chr3_3:67696843-67696862 Msa0466740:intron 40.0%
! GAGAGTTTTCCAAGAGATGA+AGG - chr3_3:67696927-67696946 None:intergenic 40.0%
TCTTGGAAAACTCTCTTCCT+TGG + chr3_3:67696932-67696951 Msa0466740:intron 40.0%
GCTAACACTTAAGTCAACCA+AGG - chr3_3:67696952-67696971 None:intergenic 40.0%
! AATGCTGGTTGGAATATTCC+CGG - chr3_3:67696988-67697007 None:intergenic 40.0%
! AAGAGTTTTCCAATGCTGGT+TGG - chr3_3:67696999-67697018 None:intergenic 40.0%
TTGAAGAGTTTGGTCATTGG+AGG + chr3_3:67697023-67697042 Msa0466740:intron 40.0%
ATTGGAGGAAATTCCTTGTC+AGG + chr3_3:67697038-67697057 Msa0466740:intron 40.0%
TTCAGATAGAACACCTGACA+AGG - chr3_3:67697054-67697073 None:intergenic 40.0%
ATCCCGTTCAATTGAAATGG+AGG - chr3_3:67697158-67697177 None:intergenic 40.0%
TAGGTCCTAAGTTTCCAACA+TGG + chr3_3:67697198-67697217 Msa0466740:intron 40.0%
GACCACAATAATTTCAGAGG+AGG + chr3_3:67697395-67697414 Msa0466740:intron 40.0%
! CCTAATTTGTGGCAGAACAT+AGG - chr3_3:67697491-67697510 None:intergenic 40.0%
CCTATGTTCTGCCACAAATT+AGG + chr3_3:67697488-67697507 Msa0466740:intron 40.0%
TGTTCTGCCACAAATTAGGT+AGG + chr3_3:67697492-67697511 Msa0466740:intron 40.0%
GTTCTGCCACAAATTAGGTA+GGG + chr3_3:67697493-67697512 Msa0466740:intron 40.0%
CTGGAGAAATTCCTGATTGT+TGG + chr3_3:67697558-67697577 Msa0466740:intron 40.0%
! TTCCTGATTGTTGGGAGTAT+TGG + chr3_3:67697567-67697586 Msa0466740:intron 40.0%
TTCCAATACTCCCAACAATC+AGG - chr3_3:67697572-67697591 None:intergenic 40.0%
!! GATTGTTGGGAGTATTGGAA+AGG + chr3_3:67697572-67697591 Msa0466740:intron 40.0%
TTGCATAACAACAGCTTGTC+TGG + chr3_3:67697683-67697702 Msa0466740:intron 40.0%
ATACTATGTGGCATCTTCAC+TGG - chr3_3:67697788-67697807 None:intergenic 40.0%
AGTGAAGATGCCACATAGTA+TGG + chr3_3:67697787-67697806 Msa0466740:intron 40.0%
CATAAGTAACATCACTGGCA+TGG + chr3_3:67697931-67697950 Msa0466740:CDS 40.0%
CTAGATTGAAAACTTGTGCG+GGG - chr3_3:67698087-67698106 None:intergenic 40.0%
TTCGAGTCAAGTTCAATGAC+TGG - chr3_3:67698117-67698136 None:intergenic 40.0%
CATCGGAGACATGAAAAACT+TGG + chr3_3:67698165-67698184 Msa0466740:CDS 40.0%
CTGTCGAACAATTACCTAGT+TGG + chr3_3:67698271-67698290 Msa0466740:intron 40.0%
TTACCTAGTTGGACAAATCC+CGG + chr3_3:67698282-67698301 Msa0466740:intron 40.0%
TTTGATGCTTCCTGCTATGT+TGG + chr3_3:67698325-67698344 Msa0466740:CDS 40.0%
TTGATGCTTCCTGCTATGTT+GGG + chr3_3:67698326-67698345 Msa0466740:CDS 40.0%
GATCATGAGTCATACCTAGA+TGG + chr3_3:67698385-67698404 Msa0466740:CDS 40.0%
TGGTTCTCTATTCCTCAACA+GGG + chr3_3:67698507-67698526 Msa0466740:CDS 40.0%
GTTCCTTAATCACGTGTTTG+TGG + chr3_3:67698552-67698571 Msa0466740:CDS 40.0%
! GCTTCTCTTCAAACTTGGTG+TGG + chr3_3:67696131-67696150 Msa0466740:CDS 45.0%
CCTGCTTGGTTGTTTGAACA+CGG + chr3_3:67696699-67696718 Msa0466740:intron 45.0%
AGAACCGCGAAACATGTTCT+CGG - chr3_3:67696901-67696920 None:intergenic 45.0%
GGTTCTATCCCTTCATCTCT+TGG + chr3_3:67696915-67696934 Msa0466740:intron 45.0%
! GTTAGCTCCGATTTTCTGAC+CGG + chr3_3:67696966-67696985 Msa0466740:intron 45.0%
! TTAGCTCCGATTTTCTGACC+GGG + chr3_3:67696967-67696986 Msa0466740:intron 45.0%
GGGAATATTCCAACCAGCAT+TGG + chr3_3:67696987-67697006 Msa0466740:intron 45.0%
!! GCCCTCCTCTGAAATTATTG+TGG - chr3_3:67697400-67697419 None:intergenic 45.0%
ATAAACGAGTCCATCGATGG+AGG - chr3_3:67697644-67697663 None:intergenic 45.0%
TCGATAAACGAGTCCATCGA+TGG - chr3_3:67697647-67697666 None:intergenic 45.0%
ATGTGGCATCTTCACTGGTA+TGG - chr3_3:67697783-67697802 None:intergenic 45.0%
GAGATATTGCACAGCTGTGT+TGG - chr3_3:67697854-67697873 None:intergenic 45.0%
GACAAAGTTGACGTGGTAAC+AGG - chr3_3:67698232-67698251 None:intergenic 45.0%
CAAGAAGGACAAAGTTGACG+TGG - chr3_3:67698239-67698258 None:intergenic 45.0%
TAGTTGGACAAATCCCGGTT+GGG + chr3_3:67698287-67698306 Msa0466740:intron 45.0%
! TTTGAAGTTGAGTCCCAACC+GGG - chr3_3:67698303-67698322 None:intergenic 45.0%
!! CTTTGAAGTTGAGTCCCAAC+CGG - chr3_3:67698304-67698323 None:intergenic 45.0%
CATGAGTCATACCTAGATGG+AGG + chr3_3:67698388-67698407 Msa0466740:CDS 45.0%
ACAGTCACTCTACTTTGGGT+TGG + chr3_3:67698450-67698469 Msa0466740:CDS 45.0%
! CAGTCACTCTACTTTGGGTT+GGG + chr3_3:67698451-67698470 Msa0466740:CDS 45.0%
!! TTGGGTGTTGGATTTGCAGT+GGG + chr3_3:67698469-67698488 Msa0466740:intron 45.0%
! TTGGATTTGCAGTGGGTTTC+TGG + chr3_3:67698476-67698495 Msa0466740:intron 45.0%
!! GTGGGTTTCTGGTGTATTTG+TGG + chr3_3:67698487-67698506 Msa0466740:intron 45.0%
GTGGTTCTCTATTCCTCAAC+AGG + chr3_3:67698506-67698525 Msa0466740:CDS 45.0%
! CTTGGAGGCACACTTATTCT+CGG + chr3_3:67698530-67698549 Msa0466740:CDS 45.0%
TTTCCAGCTGCATTCTGTCT+TGG - chr3_3:67698885-67698904 None:intergenic 45.0%
CACTAAAACTTGGGGTAGAC+CGG + chr3_3:67698924-67698943 Msa0466740:CDS 45.0%
TGAATAGGACCTTCCTCAAG+TGG + chr3_3:67698969-67698988 Msa0466740:three_prime_UTR 45.0%
ATAAATGCCGCAACCACTTG+AGG - chr3_3:67698985-67699004 None:intergenic 45.0%
CCGTGTTCAAACAACCAAGC+AGG - chr3_3:67696702-67696721 None:intergenic 50.0%
TCATGTTGCCCTAACCAACC+AGG - chr3_3:67696855-67696874 None:intergenic 50.0%
CTAGCCGAGAACATGTTTCG+CGG + chr3_3:67696894-67696913 Msa0466740:intron 50.0%
GTGGCAGAACATAGGGGAAA+TGG - chr3_3:67697483-67697502 None:intergenic 50.0%
TGGTGAAGTTCCTCCATCGA+TGG + chr3_3:67697631-67697650 Msa0466740:intron 50.0%
AGTAACATCACTGGCATGGG+AGG + chr3_3:67697935-67697954 Msa0466740:CDS 50.0%
CAACCGGGATTTGTCCAACT+AGG - chr3_3:67698288-67698307 None:intergenic 50.0%
CTAGTTGGACAAATCCCGGT+TGG + chr3_3:67698286-67698305 Msa0466740:intron 50.0%
TCCTGCTATGTTGGGAATCC+TGG + chr3_3:67698334-67698353 Msa0466740:CDS 50.0%
TCCAGGATTCCCAACATAGC+AGG - chr3_3:67698338-67698357 None:intergenic 50.0%
GTTGGGAATCCTGGACTTTG+TGG + chr3_3:67698343-67698362 Msa0466740:CDS 50.0%
GAGTCATACCTAGATGGAGG+AGG + chr3_3:67698391-67698410 Msa0466740:CDS 50.0%
!! CTCTACTTTGGGTTGGGTGT+TGG + chr3_3:67698457-67698476 Msa0466740:intron 50.0%
!! GTTGGGTGTTGGATTTGCAG+TGG + chr3_3:67698468-67698487 Msa0466740:intron 50.0%
CTCTATTCCTCAACAGGGCT+TGG + chr3_3:67698512-67698531 Msa0466740:CDS 50.0%
TATTCCTCAACAGGGCTTGG+AGG + chr3_3:67698515-67698534 Msa0466740:CDS 50.0%
! CCAAGAGGAAAGCATGCTGG+AGG - chr3_3:67696166-67696185 None:intergenic 55.0%
CCTCCAGCATGCTTTCCTCT+TGG + chr3_3:67696163-67696182 Msa0466740:CDS 55.0%
! GGACCAAGAGGAAAGCATGC+TGG - chr3_3:67696169-67696188 None:intergenic 55.0%
AGAGGAGCTCCACAAAGTCC+AGG - chr3_3:67698355-67698374 None:intergenic 55.0%
CATTGCGTCCTCCTCCATCT+AGG - chr3_3:67698402-67698421 None:intergenic 55.0%
TATGATTGGTACCACGGCCG+TGG + chr3_3:67698691-67698710 Msa0466740:intron 55.0%
ATGATTGGTACCACGGCCGT+GGG + chr3_3:67698692-67698711 Msa0466740:intron 55.0%
! TTTTGTCAAACCCACGGCCG+TGG - chr3_3:67698705-67698724 None:intergenic 55.0%
GGTCCAAGACAGAATGCAGC+TGG + chr3_3:67698879-67698898 Msa0466740:intron 55.0%
GGACCTTCCTCAAGTGGTTG+CGG + chr3_3:67698975-67698994 Msa0466740:three_prime_UTR 55.0%
ATGCCGCAACCACTTGAGGA+AGG - chr3_3:67698981-67699000 None:intergenic 55.0%
TGTGCCTCCAAGCCCTGTTG+AGG - chr3_3:67698522-67698541 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 67695985 67699107 67695985 ID=Msa0466740;Name=Msa0466740
chr3_3 mRNA 67695985 67699107 67695985 ID=Msa0466740-mRNA-1;Parent=Msa0466740;Name=Msa0466740-mRNA-1;_AED=0.32;_eAED=0.32;_QI=12|0.4|0.33|1|0|0|6|150|285
chr3_3 exon 67695985 67696243 67695985 ID=Msa0466740-mRNA-1:exon:15605;Parent=Msa0466740-mRNA-1
chr3_3 exon 67697915 67697971 67697915 ID=Msa0466740-mRNA-1:exon:15606;Parent=Msa0466740-mRNA-1
chr3_3 exon 67698077 67698259 67698077 ID=Msa0466740-mRNA-1:exon:15607;Parent=Msa0466740-mRNA-1
chr3_3 exon 67698290 67698474 67698290 ID=Msa0466740-mRNA-1:exon:15608;Parent=Msa0466740-mRNA-1
chr3_3 exon 67698488 67698595 67698488 ID=Msa0466740-mRNA-1:exon:15609;Parent=Msa0466740-mRNA-1
chr3_3 exon 67698880 67699107 67698880 ID=Msa0466740-mRNA-1:exon:15610;Parent=Msa0466740-mRNA-1
chr3_3 five_prime_UTR 67695985 67695996 67695985 ID=Msa0466740-mRNA-1:five_prime_utr;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67695997 67696243 67695997 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67697915 67697971 67697915 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67698077 67698259 67698077 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67698290 67698474 67698290 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67698488 67698595 67698488 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 CDS 67698880 67698957 67698880 ID=Msa0466740-mRNA-1:cds;Parent=Msa0466740-mRNA-1
chr3_3 three_prime_UTR 67698958 67699107 67698958 ID=Msa0466740-mRNA-1:three_prime_utr;Parent=Msa0466740-mRNA-1
Gene Sequence

>Msa0466740

ATGTTAGGCTTCACTTCACAAATTCCCATTGTTTCGCTACTACTATTATTGATGTCTACAACAATATTTGAAAGGTGCAATAGTAGCAATACGCAGCTTGGTAGTAACTGCAATGAGAAGGATCGTTCTGCATTGCTTCTCTTCAAACTTGGTGTGGAGAATCATTCCTCCAGCATGCTTTCCTCTTGGTCCATTAATGAAAAAAATTGTTGTTCATGGAAAGGAGTTCAATGTGACAACATCACAGGGTCTATTCCCAAATGCATAAGTAACATCACTGGCATGGGAGGAGCAAAGAAAACGAGTGAAATCCCCGCACAAGTTTTCAATCTAGTTCAACTCCAGTCATTGAACTTGACTCGAAATCATTTCACAGGAAAGATATCAAGAGACATCGGAGACATGAAAAACTTGGAATCTCTTGATCTATCCGACAATAAACTTGTTGGAGAAATTCCTGTTACCACGTCAACTTTGTCCTTCTTGATTGGACAAATCCCGGTTGGGACTCAACTTCAAAGTTTTGATGCTTCCTGCTATGTTGGGAATCCTGGACTTTGTGGAGCTCCTCTACCAATATGTGATCATGAGTCATACCTAGATGGAGGAGGACGCAATGATATTGATGATGATGAGAATTCTTTTTCACAGTCACTCTACTTTGGGTTGGGTTGGGTTTCTGGTGTATTTGTGGTTCTCTATTCCTCAACAGGGCTTGGAGGCACACTTATTCTCGGTTCCTTAATCACGTGTTTGTGGTTTTGGGATTTTCCAATTGACGTCCAAGACAGAATGCAGCTGGAAAATAGAAGAAAGTTTAATGGCACTAAAACTTGGGGTAGACCGGAATCAAAATAG
Protein sequence

>Msa0466740

MLGFTSQIPIVSLLLLLMSTTIFERCNSSNTQLGSNCNEKDRSALLLFKLGVENHSSSMLSSWSINEKNCCSWKGVQCDNITGSIPKCISNITGMGGAKKTSEIPAQVFNLVQLQSLNLTRNHFTGKISRDIGDMKNLESLDLSDNKLVGEIPVTTSTLSFLIGQIPVGTQLQSFDASCYVGNPGLCGAPLPICDHESYLDGGGRNDIDDDENSFSQSLYFGLGWVSGVFVVLYSSTGLGGTLILGSLITCLWFWDFPIDVQDRMQLENRRKFNGTKTWGRPESK*