AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0273230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0273230 MtrunA17_Chr2g0283231 90.223 941 52 2 1 901 1 941 0.0 1759
Msa0273230 MtrunA17_Chr4g0046101 59.052 928 312 14 1 876 1 912 0.0 1062
Msa0273230 MtrunA17_Chr2g0283211 71.429 574 70 5 192 717 1 528 0.0 805
Msa0273230 MtrunA17_Chr2g0283261 41.798 823 394 15 36 804 33 824 0.0 612
Msa0273230 MtrunA17_Chr2g0283241 40.426 846 415 14 1 794 1 809 0.0 583
Msa0273230 MtrunA17_Chr2g0283251 40.872 734 358 11 36 717 32 741 6.10e-176 529
Msa0273230 MtrunA17_Chr5g0424541 35.409 819 464 13 41 797 39 854 6.62e-159 489
Msa0273230 MtrunA17_Chr5g0424521 37.172 686 379 10 104 740 8 690 8.50e-143 440
Msa0273230 MtrunA17_Chr7g0230081 33.572 837 450 15 42 798 52 862 9.89e-141 442
Msa0273230 MtrunA17_Chr3g0136621 31.200 875 486 26 26 800 22 880 2.19e-116 379
Msa0273230 MtrunA17_Chr3g0136611 30.220 910 514 26 26 838 20 905 4.06e-114 372
Msa0273230 MtrunA17_Chr7g0230091 35.041 605 309 14 256 799 4 585 1.40e-105 341
Msa0273230 MtrunA17_Chr2g0322691 28.933 947 528 29 14 846 10 925 7.07e-103 341
Msa0273230 MtrunA17_Chr3g0144141 28.217 886 508 23 14 803 53 906 3.64e-97 326
Msa0273230 MtrunA17_Chr5g0424621 35.050 505 320 5 41 539 39 541 1.55e-96 313
Msa0273230 MtrunA17_Chr8g0370281 28.463 794 441 22 108 802 8 773 9.09e-87 295
Msa0273230 MtrunA17_Chr8g0370261 27.956 905 503 32 11 803 1 868 1.23e-85 294
Msa0273230 MtrunA17_Chr5g0407171 26.795 933 553 27 11 842 1 904 1.27e-84 291
Msa0273230 MtrunA17_Chr2g0322681 26.166 879 512 26 14 794 13 852 6.47e-83 286
Msa0273230 MtrunA17_Chr6g0467751 29.657 408 215 12 460 797 46 451 3.35e-45 170
Msa0273230 MtrunA17_Chr2g0283221 82.927 82 14 0 99 180 1 82 4.50e-42 148
Msa0273230 MtrunA17_Chr5g0424631 35.398 113 66 3 672 777 4 116 1.02e-12 66.2
Msa0273230 MtrunA17_Chr4g0045751 50.000 70 34 1 365 434 11 79 2.11e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0273230 AT2G29120.1 30.510 862 490 21 14 796 14 845 4.37e-122 393
Msa0273230 AT5G11180.2 28.523 894 518 21 14 814 14 879 5.36e-119 385
Msa0273230 AT5G11180.1 29.127 848 511 22 14 814 14 818 2.33e-117 380
Msa0273230 AT2G29100.2 30.022 916 512 27 42 878 32 897 1.05e-113 371
Msa0273230 AT2G29100.1 30.022 916 512 27 42 878 30 895 1.13e-113 370
Msa0273230 AT5G11210.5 28.423 869 502 23 42 819 37 876 4.13e-113 369
Msa0273230 AT5G11210.1 29.097 842 477 23 69 819 6 818 1.14e-111 363
Msa0273230 AT5G11210.9 29.361 814 457 22 95 819 10 794 1.98e-110 359
Msa0273230 AT2G24720.1 29.520 813 473 21 42 771 32 827 3.06e-107 353
Msa0273230 AT5G27100.1 28.620 877 491 27 77 868 69 895 3.68e-105 347
Msa0273230 AT4G31710.1 30.751 852 477 26 20 789 9 829 4.81e-105 346
Msa0273230 AT2G29110.2 29.519 874 497 24 42 833 34 870 2.60e-104 346
Msa0273230 AT2G29110.1 29.519 874 497 24 42 833 33 869 3.32e-104 345
Msa0273230 AT4G31710.2 30.271 849 478 25 20 789 32 845 1.57e-100 335
Msa0273230 AT2G24710.1 28.641 817 473 20 60 789 51 844 1.59e-99 332
Msa0273230 AT2G24710.3 28.641 817 473 20 60 789 75 868 2.39e-99 332
Msa0273230 AT5G11210.10 28.272 764 434 20 42 717 37 774 1.04e-97 324
Msa0273230 AT5G11210.2 28.272 764 434 20 42 717 37 774 1.25e-97 324
Msa0273230 AT5G11210.4 28.272 764 434 20 42 717 37 774 1.25e-97 324
Msa0273230 AT1G05200.6 28.343 875 490 27 42 818 61 896 6.82e-97 326
Msa0273230 AT1G05200.2 28.343 875 490 27 42 818 61 896 6.82e-97 326
Msa0273230 AT1G05200.1 28.343 875 490 27 42 818 61 896 6.82e-97 326
Msa0273230 AT4G35290.4 28.507 884 506 28 18 802 2 858 2.84e-95 320
Msa0273230 AT4G35290.3 28.507 884 506 28 18 802 2 858 2.84e-95 320
Msa0273230 AT4G35290.1 28.507 884 506 28 18 802 2 858 2.84e-95 320
Msa0273230 AT4G35290.2 28.507 884 506 28 18 802 2 858 2.84e-95 320
Msa0273230 AT4G35290.5 28.507 884 506 28 18 802 2 858 2.84e-95 320
Msa0273230 AT5G11210.8 29.337 709 389 19 95 717 10 692 4.34e-95 315
Msa0273230 AT5G11210.7 29.337 709 389 19 95 717 10 692 5.83e-95 315
Msa0273230 AT5G11210.6 29.337 709 389 19 95 717 10 692 5.83e-95 315
Msa0273230 AT2G17260.1 27.155 928 560 23 15 845 7 915 8.75e-95 319
Msa0273230 AT5G11210.3 29.387 701 383 19 103 717 26 700 2.74e-94 313
Msa0273230 AT3G51480.4 27.459 925 542 23 15 850 3 887 8.45e-94 316
Msa0273230 AT3G51480.1 27.459 925 542 23 15 850 3 887 8.45e-94 316
Msa0273230 AT1G42540.1 27.374 895 516 27 11 804 1 862 3.16e-92 312
Msa0273230 AT1G42540.4 27.374 895 516 27 11 804 1 862 3.16e-92 312
Msa0273230 AT1G42540.2 27.374 895 516 27 11 804 1 862 3.16e-92 312
Msa0273230 AT3G51480.2 28.227 829 470 21 108 850 8 797 2.44e-89 302
Msa0273230 AT2G24710.2 28.205 741 427 18 60 717 75 793 1.41e-86 294
Msa0273230 AT2G32400.1 26.675 851 499 23 40 797 29 847 2.65e-86 296
Msa0273230 AT2G32390.5 26.821 865 512 25 42 811 48 886 1.27e-85 295
Msa0273230 AT2G32390.2 27.387 796 469 22 104 811 10 784 3.64e-83 286
Msa0273230 AT2G32390.1 27.387 796 469 22 104 811 54 828 9.26e-83 286
Msa0273230 AT4G35290.6 27.604 797 454 26 18 717 2 772 9.37e-78 269
Msa0273230 AT5G48410.1 27.785 781 463 25 42 760 42 783 3.30e-77 270
Msa0273230 AT1G05200.7 27.249 778 437 24 42 721 61 807 1.06e-76 267
Msa0273230 AT1G05200.3 27.249 778 437 24 42 721 61 807 1.06e-76 267
Msa0273230 AT3G51480.3 26.968 775 449 18 15 700 3 749 8.56e-76 264
Msa0273230 AT5G48410.4 28.212 755 466 25 42 760 42 756 1.36e-75 265
Msa0273230 AT5G48410.3 27.793 752 469 23 42 760 42 752 1.66e-75 264
Msa0273230 AT5G48400.2 25.998 827 503 25 36 797 32 814 1.33e-71 254
Msa0273230 AT3G07520.1 25.386 843 530 22 16 795 15 821 2.56e-69 247
Msa0273230 AT5G48410.2 27.149 733 438 24 42 717 42 735 8.38e-68 241
Msa0273230 AT3G04110.1 25.604 828 482 26 37 791 22 788 1.53e-66 238
Msa0273230 AT1G42540.3 27.010 622 380 19 11 585 1 595 1.35e-61 221
Msa0273230 AT5G48400.1 25.837 747 449 24 36 717 32 738 5.86e-61 221
Msa0273230 AT2G32390.7 25.976 589 370 17 42 585 48 615 3.41e-60 217
Msa0273230 AT2G32390.6 25.976 589 370 17 42 585 48 615 3.56e-60 218
Msa0273230 AT2G32390.4 25.976 589 370 17 42 585 48 615 4.60e-60 218
Msa0273230 AT2G32390.3 25.976 589 370 17 42 585 48 615 4.60e-60 218
Msa0273230 AT1G05200.5 27.273 594 350 21 42 585 61 622 1.06e-59 216
Msa0273230 AT1G05200.4 27.027 592 354 20 42 585 61 622 1.56e-59 216
Msa0273230 AT3G04110.3 25.994 654 380 20 37 626 22 635 8.79e-56 206
Msa0273230 AT3G04110.2 24.034 828 467 27 37 791 22 760 1.72e-51 194
Msa0273230 AT5G11210.11 31.667 360 187 7 515 819 13 368 4.50e-47 174

Find 241 sgRNAs with CRISPR-Local

Find 600 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTAGAGGAGAGCCTTTC+TGG 0.092353 2_3:+4778345 None:intergenic
GACGGGTACGGTGGAGATTA+TGG 0.197685 2_3:-4780755 Msa0273230:CDS
TTAGAATTGTGGCTGGTTAC+AGG 0.254902 2_3:-4779317 Msa0273230:intron
GTTTGAATCTTGGAAGCTTA+TGG 0.257514 2_3:-4778199 Msa0273230:CDS
TAAGTCTGCTATTTCTTATA+TGG 0.260299 2_3:-4780453 Msa0273230:CDS
CGGCAATCTTTCCTCTATTA+TGG 0.265598 2_3:+4779439 None:intergenic
ATGGGATTTAATCTTGGATT+TGG 0.269592 2_3:+4781752 None:intergenic
AGCCACAATTCTAAGGTAAA+TGG 0.271246 2_3:+4779326 None:intergenic
TGTGCGGTGGCCTGGGAATA+TGG 0.279251 2_3:-4779994 Msa0273230:CDS
TCTTATATGGAAGGTGCTTT+AGG 0.279350 2_3:-4780440 Msa0273230:CDS
CAAAAGGTGCAAGTGATTAT+AGG 0.284585 2_3:-4780998 Msa0273230:CDS
GCCGTGCCGTTGCCTTCTTC+TGG 0.288620 2_3:+4778080 None:intergenic
CTCAATTTCGGAGAACGTTT+TGG 0.290721 2_3:-4780367 Msa0273230:CDS
ACTAGTCATGGCACCTCTTA+AGG 0.296799 2_3:+4781683 None:intergenic
TACTTAGATGCCAAGGATTC+TGG 0.297278 2_3:+4781573 None:intergenic
AATCCTCCAAATCTAGTTCT+AGG 0.301474 2_3:+4778572 None:intergenic
AAGAACAACAACAAGAAAAT+TGG 0.303904 2_3:-4778791 Msa0273230:CDS
ACTTTGTCTTGAAGTATATA+TGG 0.305688 2_3:-4781646 Msa0273230:five_prime_UTR
TCTGCTAGCTGAGGCACTTC+AGG 0.311111 2_3:-4780723 Msa0273230:CDS
AAGCAAGTACTAAACCATTT+GGG 0.315043 2_3:-4779822 Msa0273230:CDS
TTGAAGTGTTGTTGTAGCTC+TGG 0.318289 2_3:+4781212 None:intergenic
TCTTCACTAACCAGCTGTTC+TGG 0.318730 2_3:+4780641 None:intergenic
GTTACAAGGAATTATGCTTT+TGG 0.322213 2_3:-4780100 Msa0273230:CDS
TAAGCAAGTACTAAACCATT+TGG 0.322887 2_3:-4779823 Msa0273230:CDS
TCTAAAGTTTCTGTGTTATA+TGG 0.324985 2_3:+4777870 None:intergenic
AGGTTTGTCAAGGTTGAGTA+TGG 0.329132 2_3:-4779891 Msa0273230:CDS
TACCATTACCCCACCATTGA+TGG 0.330939 2_3:-4780894 Msa0273230:CDS
TTTGAATCTTGGAAGCTTAT+GGG 0.333295 2_3:-4778198 Msa0273230:CDS
AAGCTGAACCAAATCATTAT+AGG 0.334760 2_3:+4779761 None:intergenic
CAATGGAACCTATAATGATT+TGG 0.335179 2_3:-4779769 Msa0273230:CDS
CTCAAGCACTTGCAAGAATA+TGG 0.338694 2_3:-4781387 Msa0273230:CDS
TTCAGAGGTGTGCGGTGGCC+TGG 0.340380 2_3:-4780002 Msa0273230:CDS
TGATGAAAGGGTGTGGAAAA+AGG 0.349325 2_3:-4778054 Msa0273230:CDS
AGAACTAGATTTGGAGGATT+GGG 0.349851 2_3:-4778569 Msa0273230:CDS
GGCCAGATTCAAGTTGAATA+TGG 0.350979 2_3:+4780174 None:intergenic
ACAGTGCCATATGCAGAATC+AGG 0.351884 2_3:-4779404 Msa0273230:CDS
CAAACCAACTTTAAGTAGTT+AGG 0.352733 2_3:-4777806 Msa0273230:exon
TATATTTGCACGTAATATAT+AGG 0.355740 2_3:-4781501 Msa0273230:five_prime_UTR
ATCATTATAGGTTCCATTGA+TGG 0.360216 2_3:+4779773 None:intergenic
TTCACTCCTAGAACTAGATT+TGG 0.362027 2_3:-4778578 Msa0273230:CDS
TGCAGGACAAGGTGGAAATA+AGG 0.365605 2_3:-4780045 Msa0273230:CDS
ATTGATGGTGATTCTCGTAT+TGG 0.368561 2_3:-4781268 Msa0273230:CDS
AGCAAATTACTTACGCTCTC+CGG 0.371584 2_3:+4780488 None:intergenic
AGCAATTTCATTGGTTTAAG+TGG 0.372332 2_3:-4780197 Msa0273230:CDS
TTTGTAGGAAAATCTTAGTA+TGG 0.376393 2_3:+4781470 None:intergenic
TGTTAGATGGGATTTAATCT+TGG 0.377272 2_3:+4781746 None:intergenic
TTCAAAGAAGCTTCAAAAGT+TGG 0.377536 2_3:-4780542 Msa0273230:CDS
CATAATCTAATAATGTTTGT+AGG 0.377550 2_3:+4781455 None:intergenic
AAGAATTTGAGGCTCAATTT+CGG 0.378457 2_3:-4780379 Msa0273230:CDS
CTTCAATTCCCTCCCTTAAG+AGG 0.379404 2_3:-4781696 Msa0273230:five_prime_UTR
TGTAACCAGCCACAATTCTA+AGG 0.382185 2_3:+4779319 None:intergenic
TTTCTCTTAGTAAAGTCTTC+GGG 0.383564 2_3:+4780228 None:intergenic
GTAGGCATGTTCCATCCCTT+TGG 0.384091 2_3:+4779963 None:intergenic
TCCACCAATTTCTTCTCTAC+AGG 0.387272 2_3:-4780666 Msa0273230:CDS
CCTGCTTCTTTCTGAGTAGT+AGG 0.387559 2_3:+4780409 None:intergenic
GATACGAGTAGTTTGAATCT+TGG 0.392536 2_3:-4778209 Msa0273230:CDS
GTGACGGCGACTCATTTGTT+AGG 0.393539 2_3:-4778766 Msa0273230:CDS
GGAGAGCGTAAGTAATTTGC+TGG 0.393920 2_3:-4780486 Msa0273230:CDS
ATTTCTCTTAGTAAAGTCTT+CGG 0.395640 2_3:+4780227 None:intergenic
CACTGAATGTCTGTTACATT+TGG 0.396084 2_3:+4778818 None:intergenic
GGTGTAATATGTACGTCTTT+TGG 0.400897 2_3:+4777891 None:intergenic
GACAACAAAGTTATATCCAT+TGG 0.401324 2_3:-4781298 Msa0273230:CDS
ATCGATTGTTCTTCGAGATC+AGG 0.402653 2_3:-4777966 Msa0273230:CDS
ACCCTCAAGGCCATCAGAAT+TGG 0.403211 2_3:-4781145 Msa0273230:intron
GGCCTTGAGGGTATCCTTTG+TGG 0.403571 2_3:+4781156 None:intergenic
GGATCCTGTAGAGAAGAAAT+TGG 0.404589 2_3:+4780662 None:intergenic
CTAGTCATGGCACCTCTTAA+GGG 0.405155 2_3:+4781684 None:intergenic
CTCTTAAGGGAGGGAATTGA+AGG 0.405803 2_3:+4781697 None:intergenic
GGAGCAACAACTTTGTTAGA+TGG 0.405808 2_3:+4781733 None:intergenic
TTGATGGTGATTCTCGTATT+GGG 0.407106 2_3:-4781267 Msa0273230:CDS
CAAGTCTTCATGTGGCTGAT+TGG 0.407395 2_3:+4778106 None:intergenic
ACAACAAAGTTATATCCATT+GGG 0.412330 2_3:-4781297 Msa0273230:CDS
TATATACTTCAAGACAAAGT+TGG 0.424688 2_3:+4781649 None:intergenic
ATACAGTCTAGCAATTTCAT+TGG 0.425051 2_3:-4780206 Msa0273230:CDS
GGGTATCGGTTATCTTCCTC+TGG 0.427240 2_3:+4780335 None:intergenic
CATGAACTTACCAGAATCCT+TGG 0.430425 2_3:-4781583 Msa0273230:five_prime_UTR
GGCCATATTCAACTTGAATC+TGG 0.431728 2_3:-4780176 Msa0273230:CDS
GACAATCCTGATTCTGCATA+TGG 0.434367 2_3:+4779398 None:intergenic
ACGGGTACGGTGGAGATTAT+GGG 0.434896 2_3:-4780754 Msa0273230:CDS
CTTCTGACTGCAATTCTCAA+TGG 0.436473 2_3:+4779930 None:intergenic
CAAGGTGGAAATAAGGTTGC+TGG 0.437820 2_3:-4780038 Msa0273230:CDS
ATACCGTAAATGAGAGCAAA+AGG 0.439625 2_3:+4781343 None:intergenic
AAATGCAGACTTGAAAAGAT+TGG 0.441369 2_3:-4778288 Msa0273230:CDS
TGCAGAAGAATCTTGTCTTA+AGG 0.445801 2_3:-4780145 Msa0273230:CDS
GCTGCAATCATCAGTAGAAA+TGG 0.448087 2_3:-4780576 Msa0273230:CDS
TGAAGTGTTGTTGTAGCTCT+GGG 0.449377 2_3:+4781213 None:intergenic
ACCAATTCTGATGGCCTTGA+GGG 0.449931 2_3:+4781144 None:intergenic
TCAGAGGTGTGCGGTGGCCT+GGG 0.450796 2_3:-4780001 Msa0273230:CDS
GCAAATTACTTACGCTCTCC+GGG 0.453747 2_3:+4780489 None:intergenic
GTTCGAGGATGTAACGTTGT+TGG 0.454394 2_3:+4778232 None:intergenic
AAAAGGTGCAAGTGATTATA+GGG 0.455550 2_3:-4780997 Msa0273230:CDS
ATGCAGAACCCACTATATTC+AGG 0.457670 2_3:+4779855 None:intergenic
GCTTGTAGAGCATAAAATCC+TGG 0.458034 2_3:+4780314 None:intergenic
GTTCCATCCCTTTGGATCGC+GGG 0.458281 2_3:+4779971 None:intergenic
GGCCACCGAGCTTCCATCAA+TGG 0.459196 2_3:+4780881 None:intergenic
TCAAGACAAAGTTGGGTATG+AGG 0.459578 2_3:+4781657 None:intergenic
TAGAACTAGATTTGGAGGAT+TGG 0.461342 2_3:-4778570 Msa0273230:CDS
GTAATGTTTATGATATTCTC+TGG 0.461504 2_3:+4778713 None:intergenic
CAAGGATTCTGGTAAGTTCA+TGG 0.463138 2_3:+4781584 None:intergenic
TTCCATCAATGGTGGGGTAA+TGG 0.463487 2_3:+4780892 None:intergenic
TATTCCTAACTACTTAAAGT+TGG 0.463792 2_3:+4777802 None:intergenic
AAGACTTATGATGCTGTTGT+TGG 0.466837 2_3:-4779470 Msa0273230:CDS
ATGATAGTTCCGATGAAGCC+TGG 0.469055 2_3:-4779374 Msa0273230:CDS
GTTAAAACAAACACAATCTC+GGG 0.469148 2_3:-4780609 Msa0273230:CDS
GGATCGCGGGCCATATTCCC+AGG 0.469295 2_3:+4779984 None:intergenic
GCGAGTTCCTGTGAATGCTC+AGG 0.471198 2_3:+4777921 None:intergenic
ACTCCTAGAACTAGATTTGG+AGG 0.471198 2_3:-4778575 Msa0273230:CDS
AGTGGAGAGCCTGAATATAG+TGG 0.473693 2_3:-4779864 Msa0273230:CDS
TGGGTTCTATATGTCATGTC+TGG 0.474193 2_3:-4778179 Msa0273230:CDS
GGAGCTGCAAAGGATATGAT+AGG 0.478100 2_3:+4780917 None:intergenic
TGGACTAGTGGATAAAGAAT+CGG 0.480962 2_3:-4780522 Msa0273230:CDS
AGACTTATGATGCTGTTGTT+GGG 0.483559 2_3:-4779469 Msa0273230:CDS
TGAAAAGATTGGAAGAAAAG+TGG 0.484128 2_3:-4778277 Msa0273230:CDS
CTCGAGTGGTGATGGTCTCA+TGG 0.484869 2_3:-4778916 Msa0273230:CDS
AGTTAAAACAAACACAATCT+CGG 0.484944 2_3:-4780610 Msa0273230:CDS
TTAGCTAGTCTCACCAGAAA+AGG 0.486713 2_3:+4780860 None:intergenic
AGTAAGCTGTGAGGAAAAGA+AGG 0.487274 2_3:+4781529 None:intergenic
CATAGGTATTATCCCATCAA+TGG 0.488201 2_3:-4779786 Msa0273230:CDS
ATACTCAACCTTGACAAACC+TGG 0.490537 2_3:+4779893 None:intergenic
TTAAGGATAGTAAATGTGGC+TGG 0.492252 2_3:-4780128 Msa0273230:CDS
AGCTGAGGCACTTCAGGATG+TGG 0.492627 2_3:-4780717 Msa0273230:CDS
TATTTCCACCTTGTCCTGCA+TGG 0.494466 2_3:+4780048 None:intergenic
ATATACTTCAAGACAAAGTT+GGG 0.494788 2_3:+4781650 None:intergenic
AACATCCATGCTGACTCTCC+AGG 0.494854 2_3:+4779356 None:intergenic
TATATTCAGGCTCTCCACTC+TGG 0.498572 2_3:+4779868 None:intergenic
GCAGCTATGGTGGCTGAAGT+AGG 0.500246 2_3:-4780956 Msa0273230:CDS
TCATTATAGGTTCCATTGAT+GGG 0.501537 2_3:+4779774 None:intergenic
AAAGTGGTTAATTTCCTCAC+AGG 0.504116 2_3:-4778261 Msa0273230:CDS
TAGTGGATAAAGAATCGGTT+TGG 0.504666 2_3:-4780517 Msa0273230:CDS
CAAACTACTCGTATCGTTCG+AGG 0.506112 2_3:+4778217 None:intergenic
AAATAGTGCAGGCTTATAGC+TGG 0.506678 2_3:-4780805 Msa0273230:CDS
TTTAATCTTGGATTTGGAGA+AGG 0.508129 2_3:+4781758 None:intergenic
TCCATTGGGGTGATCATTGA+TGG 0.508250 2_3:-4781283 Msa0273230:CDS
ATTTGGAGAAGGACAAACTT+AGG 0.509087 2_3:+4781769 None:intergenic
ATCATCATATTTGTATTCAT+CGG 0.509319 2_3:+4778691 None:intergenic
CTGAATTCATAGTTTCATCT+CGG 0.510438 2_3:+4781320 None:intergenic
GCTGACTCTCCAGGCTTCAT+CGG 0.510506 2_3:+4779365 None:intergenic
CAGGGAGTATAAAGAATTTG+AGG 0.511845 2_3:-4780390 Msa0273230:CDS
GTGGAAGATCGTACCCCAAA+TGG 0.515905 2_3:+4779808 None:intergenic
AACCATTTACCTTAGAATTG+TGG 0.516275 2_3:-4779328 Msa0273230:CDS
GAGCAACAACTTTGTTAGAT+GGG 0.516669 2_3:+4781734 None:intergenic
CTTTGAACAGAATGAAAAGT+AGG 0.519155 2_3:-4780262 Msa0273230:CDS
TGTTCCATCCCTTTGGATCG+CGG 0.520850 2_3:+4779970 None:intergenic
CAAGATTCTTCTGCATGAGT+TGG 0.521098 2_3:+4780153 None:intergenic
ACGGCACGGCAAGTGATGAA+AGG 0.524292 2_3:-4778067 Msa0273230:CDS
CCTACTACTCAGAAAGAAGC+AGG 0.528776 2_3:-4780409 Msa0273230:CDS
AGAGATGATTAATGTGCAAA+AGG 0.529481 2_3:-4781014 Msa0273230:CDS
CGGCACGGCAAGTGATGAAA+GGG 0.534676 2_3:-4778066 Msa0273230:CDS
ATTTACCTTAGAATTGTGGC+TGG 0.536388 2_3:-4779324 Msa0273230:CDS
AGAGGAAAGATTGCCGTATG+TGG 0.538051 2_3:-4779432 Msa0273230:CDS
GAATATGGCCCGCGATCCAA+AGG 0.538682 2_3:-4779979 Msa0273230:CDS
TCTGCTATTTCTTATATGGA+AGG 0.540192 2_3:-4780449 Msa0273230:CDS
AGGAAAATCTTAGTATGGAA+TGG 0.540462 2_3:+4781475 None:intergenic
GAAGACTTGCCACCAGAAGA+AGG 0.540555 2_3:-4778092 Msa0273230:CDS
GTGCCGTTGCCTTCTTCTGG+TGG 0.543032 2_3:+4778083 None:intergenic
TCTACAGGATCCAGAACAGC+TGG 0.543777 2_3:-4780651 Msa0273230:CDS
AACAAGAAAATTGGTTGTGA+CGG 0.544067 2_3:-4778782 Msa0273230:CDS
TTCGATACATCTTTCACTAG+AGG 0.545856 2_3:+4778332 None:intergenic
CACCGAGCTTCCATCAATGG+TGG 0.546218 2_3:+4780884 None:intergenic
CCCCACCATTGATGGAAGCT+CGG 0.548414 2_3:-4780886 Msa0273230:CDS
CGAGTTCCTGTGAATGCTCA+GGG 0.549195 2_3:+4777922 None:intergenic
ATTAATATACTTAGATGCCA+AGG 0.550062 2_3:+4781566 None:intergenic
AGCTTCAAAAGTTGGACTAG+TGG 0.552680 2_3:-4780534 Msa0273230:CDS
CTTGTAGAGCATAAAATCCT+GGG 0.556921 2_3:+4780315 None:intergenic
TGGGGACATGACCATAATAG+AGG 0.557834 2_3:-4779450 Msa0273230:CDS
TGATACCCCTGAGCATTCAC+AGG 0.558767 2_3:-4777928 Msa0273230:CDS
ACCGAGCTTCCATCAATGGT+GGG 0.559050 2_3:+4780885 None:intergenic
GAGCATAAAATCCTGGGTAT+CGG 0.562507 2_3:+4780321 None:intergenic
ATGCATTGCAGAAATAGTGC+AGG 0.562527 2_3:-4780816 Msa0273230:CDS
AACATGGCAAGAAGCAGCTA+TGG 0.562815 2_3:-4780969 Msa0273230:CDS
CAACTTAACTCGAGTGGTGA+TGG 0.563506 2_3:-4778924 Msa0273230:CDS
AACCAATTCTGATGGCCTTG+AGG 0.569250 2_3:+4781143 None:intergenic
CGGCAAGTGATGAAAGGGTG+TGG 0.570604 2_3:-4778061 Msa0273230:CDS
TAAGGATAGTAAATGTGGCT+GGG 0.572799 2_3:-4780127 Msa0273230:CDS
TTCATGCAGATGTTCCAGAA+AGG 0.575653 2_3:-4778359 Msa0273230:intron
TGATTATAGGGATGCAAACA+TGG 0.576926 2_3:-4780985 Msa0273230:CDS
AGCAAGTACTAAACCATTTG+GGG 0.578453 2_3:-4779821 Msa0273230:CDS
ATCAATGGTGGGGTAATGGT+AGG 0.580798 2_3:+4780896 None:intergenic
TGTCTTAAGGATAGTAAATG+TGG 0.583695 2_3:-4780132 Msa0273230:CDS
TAGTAATCTACGAAGATGAC+GGG 0.586071 2_3:-4780772 Msa0273230:CDS
TCCTGTAGAGAAGAAATTGG+TGG 0.586300 2_3:+4780665 None:intergenic
GGTTCAGCTTGTCTATAACA+AGG 0.588944 2_3:-4779748 Msa0273230:intron
GGCACTGTAAAATCCACATA+CGG 0.589113 2_3:+4779419 None:intergenic
GGAAATACAAAATGTTTCAG+AGG 0.589541 2_3:-4780017 Msa0273230:CDS
GTGCTTGAGTAACAGTTGAA+AGG 0.589556 2_3:+4781401 None:intergenic
TACGAAGATGACGGGTACGG+TGG 0.589705 2_3:-4780764 Msa0273230:CDS
GAATACTGCAAGAGATACAC+TGG 0.591221 2_3:-4778602 Msa0273230:CDS
ACCAGAAGAAGGCAACGGCA+CGG 0.591966 2_3:-4778081 Msa0273230:CDS
GACTTATGATGCTGTTGTTG+GGG 0.592447 2_3:-4779468 Msa0273230:CDS
TACCGTAAATGAGAGCAAAA+GGG 0.593407 2_3:+4781344 None:intergenic
TTCCACCTTGTCCTGCATGG+TGG 0.593618 2_3:+4780051 None:intergenic
TCTGGTGGCAAGTCTTCATG+TGG 0.597975 2_3:+4778098 None:intergenic
CAAATGTAACAGACATTCAG+TGG 0.606143 2_3:-4778817 Msa0273230:CDS
TGCTAATACAAACCATCAAG+TGG 0.606228 2_3:-4778136 Msa0273230:CDS
ATTGAAGGAAAGTGTTTGTG+AGG 0.606925 2_3:+4781712 None:intergenic
ATGGCAAGAAGCAGCTATGG+TGG 0.608472 2_3:-4780966 Msa0273230:CDS
GATATACTAACCAATTCTGA+TGG 0.608794 2_3:+4781135 None:intergenic
TGAAGCCTGGAGAGTCAGCA+TGG 0.609802 2_3:-4779361 Msa0273230:CDS
AAAGAACAATAATTCAAGCA+AGG 0.610204 2_3:-4778000 Msa0273230:CDS
GTTAGAGTAACTAGTTACTG+AGG 0.610585 2_3:-4777779 Msa0273230:three_prime_UTR
TTTACTACAATCCACCATGC+AGG 0.612476 2_3:-4780062 Msa0273230:CDS
GGTAATGGTAGGAGCTGCAA+AGG 0.612812 2_3:+4780907 None:intergenic
AGAATCGGTTTGGATGATCC+CGG 0.613859 2_3:-4780507 Msa0273230:CDS
GTAGTAATCTACGAAGATGA+CGG 0.614142 2_3:-4780773 Msa0273230:CDS
TGTGGCTGGGAAGAGTTACA+AGG 0.614397 2_3:-4780114 Msa0273230:CDS
CTTGACAAACCTGGAAAACG+AGG 0.614721 2_3:+4779902 None:intergenic
GTCATGGCACCTCTTAAGGG+AGG 0.615892 2_3:+4781687 None:intergenic
GAAAGAACAAGAAGTAGCCA+TGG 0.616380 2_3:-4781245 Msa0273230:CDS
GTGGAGAGCCTGAATATAGT+GGG 0.616657 2_3:-4779863 Msa0273230:CDS
CTGGTGAGACTAGCTAACAC+TGG 0.624085 2_3:-4780854 Msa0273230:CDS
GCTCTGGGATGCAATGTCCA+TGG 0.624168 2_3:+4781228 None:intergenic
TGGCCCGCGATCCAAAGGGA+TGG 0.626534 2_3:-4779974 Msa0273230:CDS
TGGGGTACGATCTTCCACAT+AGG 0.626562 2_3:-4779803 Msa0273230:CDS
ACCATCAATGATCACCCCAA+TGG 0.626807 2_3:+4781282 None:intergenic
AAGACTAGCTGTGTAGCTTG+AGG 0.629646 2_3:+4778871 None:intergenic
GAGGAAGATAACCGATACCC+AGG 0.630075 2_3:-4780332 Msa0273230:CDS
ATCTACGAAGATGACGGGTA+CGG 0.634601 2_3:-4780767 Msa0273230:CDS
GTAGAGAAGAAATTGGTGGA+AGG 0.635048 2_3:+4780669 None:intergenic
AAGGTTGAGTATGGCCAGAG+TGG 0.636473 2_3:-4779882 Msa0273230:CDS
ACAATCCACCATGCAGGACA+AGG 0.643218 2_3:-4780056 Msa0273230:CDS
GGTATGAGGAAGACTAGTCA+TGG 0.643787 2_3:+4781671 None:intergenic
TCATGGCACCTCTTAAGGGA+GGG 0.646841 2_3:+4781688 None:intergenic
AATATGGCCCGCGATCCAAA+GGG 0.649327 2_3:-4779978 Msa0273230:CDS
CTACTACTCAGAAAGAAGCA+GGG 0.649673 2_3:-4780408 Msa0273230:CDS
GATGCTAGCTCTGCTAGCTG+AGG 0.655112 2_3:-4780732 Msa0273230:CDS
AATGTTTCAGAGGTGTGCGG+TGG 0.657970 2_3:-4780007 Msa0273230:CDS
CACCATTGATGGAAGCTCGG+TGG 0.657981 2_3:-4780883 Msa0273230:CDS
TTGATGGGATAATACCTATG+TGG 0.658833 2_3:+4779789 None:intergenic
GCACAGCAACTTAACTCGAG+TGG 0.659960 2_3:-4778930 Msa0273230:CDS
CAACAAAGTTATATCCATTG+GGG 0.662101 2_3:-4781296 Msa0273230:CDS
CTCCACAAAGGATACCCTCA+AGG 0.664972 2_3:-4781158 Msa0273230:CDS
CCGAGCTTCCATCAATGGTG+GGG 0.679117 2_3:+4780886 None:intergenic
ACAGAAACTTTAGAACCACA+TGG 0.680597 2_3:-4777861 Msa0273230:CDS
TTGCCACCAGAAGAAGGCAA+CGG 0.685580 2_3:-4778086 Msa0273230:CDS
CAAAATGTTTCAGAGGTGTG+CGG 0.691271 2_3:-4780010 Msa0273230:CDS
CTACTTCAAGAACTCCACAA+AGG 0.707432 2_3:-4781170 Msa0273230:CDS
ATCCACCATGCAGGACAAGG+TGG 0.708541 2_3:-4780053 Msa0273230:CDS
TATAATATAAGTAAGCTGTG+AGG 0.725787 2_3:+4781520 None:intergenic
GTTGTTGGAGCAATCCTGTG+AGG 0.728711 2_3:+4778247 None:intergenic
AAATTGGTGGAAGGACTAAG+CGG 0.735164 2_3:+4780678 None:intergenic
GAGTTCCTGTGAATGCTCAG+GGG 0.746440 2_3:+4777923 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAATTTATTTTATCAGT+AGG - chr2_3:4780326-4780345 Msa0273230:CDS 15.0%
!! TTGAATGTAATAATAAGTAA+GGG + chr2_3:4781019-4781038 None:intergenic 15.0%
!! ATTGAATGTAATAATAAGTA+AGG + chr2_3:4781020-4781039 None:intergenic 15.0%
!!! TATCAATTTATTTTATCAGT+AGG - chr2_3:4780326-4780345 Msa0273230:CDS 15.0%
!! TTGAATGTAATAATAAGTAA+GGG + chr2_3:4781019-4781038 None:intergenic 15.0%
!! ATTGAATGTAATAATAAGTA+AGG + chr2_3:4781020-4781039 None:intergenic 15.0%
!! TATATTTGCACGTAATATAT+AGG - chr2_3:4777998-4778017 Msa0273230:CDS 20.0%
!! CATAATCTAATAATGTTTGT+AGG + chr2_3:4778047-4778066 None:intergenic 20.0%
!! TTTAAGAAAGTTAACCAAAA+GGG + chr2_3:4778425-4778444 None:intergenic 20.0%
!! ATTTAAGAAAGTTAACCAAA+AGG + chr2_3:4778426-4778445 None:intergenic 20.0%
!! TCAATTCAATGTTTCAAATT+AGG + chr2_3:4780507-4780526 None:intergenic 20.0%
!! ATCATCATATTTGTATTCAT+CGG + chr2_3:4780811-4780830 None:intergenic 20.0%
!!! TGATGAATACTTTTTCATAT+GGG + chr2_3:4780875-4780894 None:intergenic 20.0%
!! TAAGGGTAATTAAAAAATCA+AGG + chr2_3:4781002-4781021 None:intergenic 20.0%
!!! GAATTCAAGTATTGTAATAT+CGG - chr2_3:4781092-4781111 Msa0273230:intron 20.0%
!! TATATTTGCACGTAATATAT+AGG - chr2_3:4777998-4778017 Msa0273230:CDS 20.0%
!! CATAATCTAATAATGTTTGT+AGG + chr2_3:4778047-4778066 None:intergenic 20.0%
!! TTTAAGAAAGTTAACCAAAA+GGG + chr2_3:4778425-4778444 None:intergenic 20.0%
!! ATTTAAGAAAGTTAACCAAA+AGG + chr2_3:4778426-4778445 None:intergenic 20.0%
!! TCAATTCAATGTTTCAAATT+AGG + chr2_3:4780507-4780526 None:intergenic 20.0%
!! ATCATCATATTTGTATTCAT+CGG + chr2_3:4780811-4780830 None:intergenic 20.0%
!!! TGATGAATACTTTTTCATAT+GGG + chr2_3:4780875-4780894 None:intergenic 20.0%
!! TAAGGGTAATTAAAAAATCA+AGG + chr2_3:4781002-4781021 None:intergenic 20.0%
!!! GAATTCAAGTATTGTAATAT+CGG - chr2_3:4781092-4781111 Msa0273230:intron 20.0%
! ATATACTTCAAGACAAAGTT+GGG + chr2_3:4777852-4777871 None:intergenic 25.0%
! TATATACTTCAAGACAAAGT+TGG + chr2_3:4777853-4777872 None:intergenic 25.0%
! ACTTTGTCTTGAAGTATATA+TGG - chr2_3:4777853-4777872 Msa0273230:CDS 25.0%
! ATTAATATACTTAGATGCCA+AGG + chr2_3:4777936-4777955 None:intergenic 25.0%
! TATAATATAAGTAAGCTGTG+AGG + chr2_3:4777982-4778001 None:intergenic 25.0%
! TTTGTAGGAAAATCTTAGTA+TGG + chr2_3:4778032-4778051 None:intergenic 25.0%
! ACAACAAAGTTATATCCATT+GGG - chr2_3:4778202-4778221 Msa0273230:CDS 25.0%
!! TTAAAGTTTTCATTCCCTTT+TGG - chr2_3:4778408-4778427 Msa0273230:intron 25.0%
! AGTTAAAACAAACACAATCT+CGG - chr2_3:4778889-4778908 Msa0273230:CDS 25.0%
!!! TAAGTCTGCTATTTCTTATA+TGG - chr2_3:4779046-4779065 Msa0273230:intron 25.0%
! ATTTCTCTTAGTAAAGTCTT+CGG + chr2_3:4779275-4779294 None:intergenic 25.0%
! TGAAATGAAATGCTTAACTT+TGG - chr2_3:4779799-4779818 Msa0273230:CDS 25.0%
!!! ATGTTTTCGCTATATTGATT+TGG - chr2_3:4779974-4779993 Msa0273230:CDS 25.0%
! TTTAACCACACATAAACAAA+AGG + chr2_3:4780001-4780020 None:intergenic 25.0%
! TTTACACAATGTTAGTTGTT+TGG - chr2_3:4780216-4780235 Msa0273230:CDS 25.0%
! TATTTCGCATCAAAATTGTT+AGG + chr2_3:4780447-4780466 None:intergenic 25.0%
! AAGAACAACAACAAGAAAAT+TGG - chr2_3:4780708-4780727 Msa0273230:CDS 25.0%
! GTAATGTTTATGATATTCTC+TGG + chr2_3:4780789-4780808 None:intergenic 25.0%
!!! CTGATGAATACTTTTTCATA+TGG + chr2_3:4780876-4780895 None:intergenic 25.0%
! AAAAAATCAAGGATGAAGAA+GGG + chr2_3:4780991-4781010 None:intergenic 25.0%
! TAAAAAATCAAGGATGAAGA+AGG + chr2_3:4780992-4781011 None:intergenic 25.0%
! AAAGAACAATAATTCAAGCA+AGG - chr2_3:4781499-4781518 Msa0273230:five_prime_UTR 25.0%
!! TCTAAAGTTTCTGTGTTATA+TGG + chr2_3:4781632-4781651 None:intergenic 25.0%
! TATTCCTAACTACTTAAAGT+TGG + chr2_3:4781700-4781719 None:intergenic 25.0%
! ATATACTTCAAGACAAAGTT+GGG + chr2_3:4777852-4777871 None:intergenic 25.0%
! TATATACTTCAAGACAAAGT+TGG + chr2_3:4777853-4777872 None:intergenic 25.0%
! ACTTTGTCTTGAAGTATATA+TGG - chr2_3:4777853-4777872 Msa0273230:CDS 25.0%
! ATTAATATACTTAGATGCCA+AGG + chr2_3:4777936-4777955 None:intergenic 25.0%
! TATAATATAAGTAAGCTGTG+AGG + chr2_3:4777982-4778001 None:intergenic 25.0%
! TTTGTAGGAAAATCTTAGTA+TGG + chr2_3:4778032-4778051 None:intergenic 25.0%
! ACAACAAAGTTATATCCATT+GGG - chr2_3:4778202-4778221 Msa0273230:CDS 25.0%
!! TTAAAGTTTTCATTCCCTTT+TGG - chr2_3:4778408-4778427 Msa0273230:intron 25.0%
! AGTTAAAACAAACACAATCT+CGG - chr2_3:4778889-4778908 Msa0273230:CDS 25.0%
!!! TAAGTCTGCTATTTCTTATA+TGG - chr2_3:4779046-4779065 Msa0273230:intron 25.0%
! ATTTCTCTTAGTAAAGTCTT+CGG + chr2_3:4779275-4779294 None:intergenic 25.0%
! TGAAATGAAATGCTTAACTT+TGG - chr2_3:4779799-4779818 Msa0273230:CDS 25.0%
!!! ATGTTTTCGCTATATTGATT+TGG - chr2_3:4779974-4779993 Msa0273230:CDS 25.0%
! TTTAACCACACATAAACAAA+AGG + chr2_3:4780001-4780020 None:intergenic 25.0%
! TTTACACAATGTTAGTTGTT+TGG - chr2_3:4780216-4780235 Msa0273230:CDS 25.0%
! TATTTCGCATCAAAATTGTT+AGG + chr2_3:4780447-4780466 None:intergenic 25.0%
! AAGAACAACAACAAGAAAAT+TGG - chr2_3:4780708-4780727 Msa0273230:CDS 25.0%
! GTAATGTTTATGATATTCTC+TGG + chr2_3:4780789-4780808 None:intergenic 25.0%
!!! CTGATGAATACTTTTTCATA+TGG + chr2_3:4780876-4780895 None:intergenic 25.0%
! AAAAAATCAAGGATGAAGAA+GGG + chr2_3:4780991-4781010 None:intergenic 25.0%
! TAAAAAATCAAGGATGAAGA+AGG + chr2_3:4780992-4781011 None:intergenic 25.0%
! AAAGAACAATAATTCAAGCA+AGG - chr2_3:4781499-4781518 Msa0273230:five_prime_UTR 25.0%
!! TCTAAAGTTTCTGTGTTATA+TGG + chr2_3:4781632-4781651 None:intergenic 25.0%
! TATTCCTAACTACTTAAAGT+TGG + chr2_3:4781700-4781719 None:intergenic 25.0%
TTTAATCTTGGATTTGGAGA+AGG + chr2_3:4777744-4777763 None:intergenic 30.0%
ATGGGATTTAATCTTGGATT+TGG + chr2_3:4777750-4777769 None:intergenic 30.0%
TGTTAGATGGGATTTAATCT+TGG + chr2_3:4777756-4777775 None:intergenic 30.0%
AGGAAAATCTTAGTATGGAA+TGG + chr2_3:4778027-4778046 None:intergenic 30.0%
CTGAATTCATAGTTTCATCT+CGG + chr2_3:4778182-4778201 None:intergenic 30.0%
GACAACAAAGTTATATCCAT+TGG - chr2_3:4778201-4778220 Msa0273230:CDS 30.0%
CAACAAAGTTATATCCATTG+GGG - chr2_3:4778203-4778222 Msa0273230:CDS 30.0%
GATATACTAACCAATTCTGA+TGG + chr2_3:4778367-4778386 None:intergenic 30.0%
AGAGATGATTAATGTGCAAA+AGG - chr2_3:4778485-4778504 Msa0273230:intron 30.0%
! AAAAGGTGCAAGTGATTATA+GGG - chr2_3:4778502-4778521 Msa0273230:intron 30.0%
GTTAAAACAAACACAATCTC+GGG - chr2_3:4778890-4778909 Msa0273230:CDS 30.0%
TTCAAAGAAGCTTCAAAAGT+TGG - chr2_3:4778957-4778976 Msa0273230:intron 30.0%
!! TCTGCTATTTCTTATATGGA+AGG - chr2_3:4779050-4779069 Msa0273230:intron 30.0%
! AAGAATTTGAGGCTCAATTT+CGG - chr2_3:4779120-4779139 Msa0273230:intron 30.0%
CTTTGAACAGAATGAAAAGT+AGG - chr2_3:4779237-4779256 Msa0273230:intron 30.0%
TTTCTCTTAGTAAAGTCTTC+GGG + chr2_3:4779274-4779293 None:intergenic 30.0%
ATACAGTCTAGCAATTTCAT+TGG - chr2_3:4779293-4779312 Msa0273230:intron 30.0%
!! AGCAATTTCATTGGTTTAAG+TGG - chr2_3:4779302-4779321 Msa0273230:intron 30.0%
TGTCTTAAGGATAGTAAATG+TGG - chr2_3:4779367-4779386 Msa0273230:CDS 30.0%
! GTTACAAGGAATTATGCTTT+TGG - chr2_3:4779399-4779418 Msa0273230:CDS 30.0%
GGAAATACAAAATGTTTCAG+AGG - chr2_3:4779482-4779501 Msa0273230:intron 30.0%
TAAGCAAGTACTAAACCATT+TGG - chr2_3:4779676-4779695 Msa0273230:intron 30.0%
AAGCAAGTACTAAACCATTT+GGG - chr2_3:4779677-4779696 Msa0273230:intron 30.0%
TCATTATAGGTTCCATTGAT+GGG + chr2_3:4779728-4779747 None:intergenic 30.0%
ATCATTATAGGTTCCATTGA+TGG + chr2_3:4779729-4779748 None:intergenic 30.0%
CAATGGAACCTATAATGATT+TGG - chr2_3:4779730-4779749 Msa0273230:intron 30.0%
AAGCTGAACCAAATCATTAT+AGG + chr2_3:4779741-4779760 None:intergenic 30.0%
TTGAATACATCATCACAGAA+AGG + chr2_3:4779870-4779889 None:intergenic 30.0%
TGTATTCAACCATACTATAG+AGG - chr2_3:4779881-4779900 Msa0273230:CDS 30.0%
AACCATTTACCTTAGAATTG+TGG - chr2_3:4780171-4780190 Msa0273230:CDS 30.0%
TTATCAGTAGGAATCAAACT+TGG - chr2_3:4780338-4780357 Msa0273230:CDS 30.0%
! TAGGAAGTTTGAGATTGATA+TGG + chr2_3:4780428-4780447 None:intergenic 30.0%
AATTAGGAGCTTTCTTTAAC+AGG + chr2_3:4780491-4780510 None:intergenic 30.0%
AACAAGAAAATTGGTTGTGA+CGG - chr2_3:4780717-4780736 Msa0273230:CDS 30.0%
! TGAACTTTTCAACTTTCTCT+AGG + chr2_3:4780764-4780783 None:intergenic 30.0%
ACTGAATTCAACTTCATACA+AGG + chr2_3:4781049-4781068 None:intergenic 30.0%
AAATGCAGACTTGAAAAGAT+TGG - chr2_3:4781211-4781230 Msa0273230:CDS 30.0%
TGAAAAGATTGGAAGAAAAG+TGG - chr2_3:4781222-4781241 Msa0273230:CDS 30.0%
TTTGAATCTTGGAAGCTTAT+GGG - chr2_3:4781301-4781320 Msa0273230:CDS 30.0%
!!! CAATTATTTTGATGTCCATG+TGG + chr2_3:4781656-4781675 None:intergenic 30.0%
CAAACCAACTTTAAGTAGTT+AGG - chr2_3:4781693-4781712 Msa0273230:five_prime_UTR 30.0%
TTTAATCTTGGATTTGGAGA+AGG + chr2_3:4777744-4777763 None:intergenic 30.0%
ATGGGATTTAATCTTGGATT+TGG + chr2_3:4777750-4777769 None:intergenic 30.0%
TGTTAGATGGGATTTAATCT+TGG + chr2_3:4777756-4777775 None:intergenic 30.0%
AGGAAAATCTTAGTATGGAA+TGG + chr2_3:4778027-4778046 None:intergenic 30.0%
CTGAATTCATAGTTTCATCT+CGG + chr2_3:4778182-4778201 None:intergenic 30.0%
GACAACAAAGTTATATCCAT+TGG - chr2_3:4778201-4778220 Msa0273230:CDS 30.0%
CAACAAAGTTATATCCATTG+GGG - chr2_3:4778203-4778222 Msa0273230:CDS 30.0%
GATATACTAACCAATTCTGA+TGG + chr2_3:4778367-4778386 None:intergenic 30.0%
AGAGATGATTAATGTGCAAA+AGG - chr2_3:4778485-4778504 Msa0273230:intron 30.0%
! AAAAGGTGCAAGTGATTATA+GGG - chr2_3:4778502-4778521 Msa0273230:intron 30.0%
GTTAAAACAAACACAATCTC+GGG - chr2_3:4778890-4778909 Msa0273230:CDS 30.0%
TTCAAAGAAGCTTCAAAAGT+TGG - chr2_3:4778957-4778976 Msa0273230:intron 30.0%
!! TCTGCTATTTCTTATATGGA+AGG - chr2_3:4779050-4779069 Msa0273230:intron 30.0%
! AAGAATTTGAGGCTCAATTT+CGG - chr2_3:4779120-4779139 Msa0273230:intron 30.0%
CTTTGAACAGAATGAAAAGT+AGG - chr2_3:4779237-4779256 Msa0273230:intron 30.0%
TTTCTCTTAGTAAAGTCTTC+GGG + chr2_3:4779274-4779293 None:intergenic 30.0%
ATACAGTCTAGCAATTTCAT+TGG - chr2_3:4779293-4779312 Msa0273230:intron 30.0%
!! AGCAATTTCATTGGTTTAAG+TGG - chr2_3:4779302-4779321 Msa0273230:intron 30.0%
TGTCTTAAGGATAGTAAATG+TGG - chr2_3:4779367-4779386 Msa0273230:CDS 30.0%
! GTTACAAGGAATTATGCTTT+TGG - chr2_3:4779399-4779418 Msa0273230:CDS 30.0%
GGAAATACAAAATGTTTCAG+AGG - chr2_3:4779482-4779501 Msa0273230:intron 30.0%
TAAGCAAGTACTAAACCATT+TGG - chr2_3:4779676-4779695 Msa0273230:intron 30.0%
AAGCAAGTACTAAACCATTT+GGG - chr2_3:4779677-4779696 Msa0273230:intron 30.0%
TCATTATAGGTTCCATTGAT+GGG + chr2_3:4779728-4779747 None:intergenic 30.0%
ATCATTATAGGTTCCATTGA+TGG + chr2_3:4779729-4779748 None:intergenic 30.0%
CAATGGAACCTATAATGATT+TGG - chr2_3:4779730-4779749 Msa0273230:intron 30.0%
AAGCTGAACCAAATCATTAT+AGG + chr2_3:4779741-4779760 None:intergenic 30.0%
TTGAATACATCATCACAGAA+AGG + chr2_3:4779870-4779889 None:intergenic 30.0%
TGTATTCAACCATACTATAG+AGG - chr2_3:4779881-4779900 Msa0273230:CDS 30.0%
AACCATTTACCTTAGAATTG+TGG - chr2_3:4780171-4780190 Msa0273230:CDS 30.0%
TTATCAGTAGGAATCAAACT+TGG - chr2_3:4780338-4780357 Msa0273230:CDS 30.0%
! TAGGAAGTTTGAGATTGATA+TGG + chr2_3:4780428-4780447 None:intergenic 30.0%
AATTAGGAGCTTTCTTTAAC+AGG + chr2_3:4780491-4780510 None:intergenic 30.0%
AACAAGAAAATTGGTTGTGA+CGG - chr2_3:4780717-4780736 Msa0273230:CDS 30.0%
! TGAACTTTTCAACTTTCTCT+AGG + chr2_3:4780764-4780783 None:intergenic 30.0%
ACTGAATTCAACTTCATACA+AGG + chr2_3:4781049-4781068 None:intergenic 30.0%
AAATGCAGACTTGAAAAGAT+TGG - chr2_3:4781211-4781230 Msa0273230:CDS 30.0%
TGAAAAGATTGGAAGAAAAG+TGG - chr2_3:4781222-4781241 Msa0273230:CDS 30.0%
TTTGAATCTTGGAAGCTTAT+GGG - chr2_3:4781301-4781320 Msa0273230:CDS 30.0%
!!! CAATTATTTTGATGTCCATG+TGG + chr2_3:4781656-4781675 None:intergenic 30.0%
CAAACCAACTTTAAGTAGTT+AGG - chr2_3:4781693-4781712 Msa0273230:five_prime_UTR 30.0%
ATTTGGAGAAGGACAAACTT+AGG + chr2_3:4777733-4777752 None:intergenic 35.0%
GAGCAACAACTTTGTTAGAT+GGG + chr2_3:4777768-4777787 None:intergenic 35.0%
!! ATTGAAGGAAAGTGTTTGTG+AGG + chr2_3:4777790-4777809 None:intergenic 35.0%
! ATCCCTTTTGCTCTCATTTA+CGG - chr2_3:4778153-4778172 Msa0273230:CDS 35.0%
TACCGTAAATGAGAGCAAAA+GGG + chr2_3:4778158-4778177 None:intergenic 35.0%
ATACCGTAAATGAGAGCAAA+AGG + chr2_3:4778159-4778178 None:intergenic 35.0%
!! ATTGATGGTGATTCTCGTAT+TGG - chr2_3:4778231-4778250 Msa0273230:CDS 35.0%
!! TTGATGGTGATTCTCGTATT+GGG - chr2_3:4778232-4778251 Msa0273230:CDS 35.0%
! CAAAAGGTGCAAGTGATTAT+AGG - chr2_3:4778501-4778520 Msa0273230:intron 35.0%
TGATTATAGGGATGCAAACA+TGG - chr2_3:4778514-4778533 Msa0273230:intron 35.0%
GTAGTAATCTACGAAGATGA+CGG - chr2_3:4778726-4778745 Msa0273230:CDS 35.0%
TAGTAATCTACGAAGATGAC+GGG - chr2_3:4778727-4778746 Msa0273230:CDS 35.0%
!! TGGACTAGTGGATAAAGAAT+CGG - chr2_3:4778977-4778996 Msa0273230:intron 35.0%
! TAGTGGATAAAGAATCGGTT+TGG - chr2_3:4778982-4779001 Msa0273230:intron 35.0%
!! TCTTATATGGAAGGTGCTTT+AGG - chr2_3:4779059-4779078 Msa0273230:intron 35.0%
! CAGGGAGTATAAAGAATTTG+AGG - chr2_3:4779109-4779128 Msa0273230:intron 35.0%
CTTGTAGAGCATAAAATCCT+GGG + chr2_3:4779187-4779206 None:intergenic 35.0%
TGCAGAAGAATCTTGTCTTA+AGG - chr2_3:4779354-4779373 Msa0273230:CDS 35.0%
TTAAGGATAGTAAATGTGGC+TGG - chr2_3:4779371-4779390 Msa0273230:CDS 35.0%
TAAGGATAGTAAATGTGGCT+GGG - chr2_3:4779372-4779391 Msa0273230:CDS 35.0%
!!! CTCAATGGATTTTTTGCAGT+AGG + chr2_3:4779557-4779576 None:intergenic 35.0%
AGCAAGTACTAAACCATTTG+GGG - chr2_3:4779678-4779697 Msa0273230:intron 35.0%
TTGATGGGATAATACCTATG+TGG + chr2_3:4779713-4779732 None:intergenic 35.0%
CATAGGTATTATCCCATCAA+TGG - chr2_3:4779713-4779732 Msa0273230:intron 35.0%
!! TTGGACCTTTTGTTTATGTG+TGG - chr2_3:4779993-4780012 Msa0273230:CDS 35.0%
AAGACTTATGATGCTGTTGT+TGG - chr2_3:4780029-4780048 Msa0273230:CDS 35.0%
AGACTTATGATGCTGTTGTT+GGG - chr2_3:4780030-4780049 Msa0273230:CDS 35.0%
!! AGCCACAATTCTAAGGTAAA+TGG + chr2_3:4780176-4780195 None:intergenic 35.0%
ATTTACCTTAGAATTGTGGC+TGG - chr2_3:4780175-4780194 Msa0273230:CDS 35.0%
TGAGATTGATATGGACCATT+GGG + chr2_3:4780419-4780438 None:intergenic 35.0%
TTGAGATTGATATGGACCAT+TGG + chr2_3:4780420-4780439 None:intergenic 35.0%
! TGTCTATGCTTTCATTTTGC+AGG - chr2_3:4780537-4780556 Msa0273230:CDS 35.0%
! GTCTATGCTTTCATTTTGCA+GGG - chr2_3:4780538-4780557 Msa0273230:CDS 35.0%
! TCTATGCTTTCATTTTGCAG+GGG - chr2_3:4780539-4780558 Msa0273230:CDS 35.0%
CACTGAATGTCTGTTACATT+TGG + chr2_3:4780684-4780703 None:intergenic 35.0%
CAAATGTAACAGACATTCAG+TGG - chr2_3:4780682-4780701 Msa0273230:CDS 35.0%
TTCACTCCTAGAACTAGATT+TGG - chr2_3:4780921-4780940 Msa0273230:CDS 35.0%
!! AATCCTCCAAATCTAGTTCT+AGG + chr2_3:4780930-4780949 None:intergenic 35.0%
TAGAACTAGATTTGGAGGAT+TGG - chr2_3:4780929-4780948 Msa0273230:CDS 35.0%
AGAACTAGATTTGGAGGATT+GGG - chr2_3:4780930-4780949 Msa0273230:CDS 35.0%
TTCGATACATCTTTCACTAG+AGG + chr2_3:4781170-4781189 None:intergenic 35.0%
AAAGTGGTTAATTTCCTCAC+AGG - chr2_3:4781238-4781257 Msa0273230:CDS 35.0%
GATACGAGTAGTTTGAATCT+TGG - chr2_3:4781290-4781309 Msa0273230:CDS 35.0%
GTTTGAATCTTGGAAGCTTA+TGG - chr2_3:4781300-4781319 Msa0273230:CDS 35.0%
TGCTAATACAAACCATCAAG+TGG - chr2_3:4781363-4781382 Msa0273230:CDS 35.0%
!! ATTGGATTTTAGCCACTTGA+TGG + chr2_3:4781378-4781397 None:intergenic 35.0%
! GGTGTAATATGTACGTCTTT+TGG + chr2_3:4781611-4781630 None:intergenic 35.0%
!! ACAGAAACTTTAGAACCACA+TGG - chr2_3:4781638-4781657 Msa0273230:five_prime_UTR 35.0%
GTTAGAGTAACTAGTTACTG+AGG - chr2_3:4781720-4781739 Msa0273230:five_prime_UTR 35.0%
ATTTGGAGAAGGACAAACTT+AGG + chr2_3:4777733-4777752 None:intergenic 35.0%
GAGCAACAACTTTGTTAGAT+GGG + chr2_3:4777768-4777787 None:intergenic 35.0%
!! ATTGAAGGAAAGTGTTTGTG+AGG + chr2_3:4777790-4777809 None:intergenic 35.0%
! ATCCCTTTTGCTCTCATTTA+CGG - chr2_3:4778153-4778172 Msa0273230:CDS 35.0%
TACCGTAAATGAGAGCAAAA+GGG + chr2_3:4778158-4778177 None:intergenic 35.0%
ATACCGTAAATGAGAGCAAA+AGG + chr2_3:4778159-4778178 None:intergenic 35.0%
!! ATTGATGGTGATTCTCGTAT+TGG - chr2_3:4778231-4778250 Msa0273230:CDS 35.0%
!! TTGATGGTGATTCTCGTATT+GGG - chr2_3:4778232-4778251 Msa0273230:CDS 35.0%
! CAAAAGGTGCAAGTGATTAT+AGG - chr2_3:4778501-4778520 Msa0273230:intron 35.0%
TGATTATAGGGATGCAAACA+TGG - chr2_3:4778514-4778533 Msa0273230:intron 35.0%
GTAGTAATCTACGAAGATGA+CGG - chr2_3:4778726-4778745 Msa0273230:CDS 35.0%
TAGTAATCTACGAAGATGAC+GGG - chr2_3:4778727-4778746 Msa0273230:CDS 35.0%
!! TGGACTAGTGGATAAAGAAT+CGG - chr2_3:4778977-4778996 Msa0273230:intron 35.0%
! TAGTGGATAAAGAATCGGTT+TGG - chr2_3:4778982-4779001 Msa0273230:intron 35.0%
!! TCTTATATGGAAGGTGCTTT+AGG - chr2_3:4779059-4779078 Msa0273230:intron 35.0%
! CAGGGAGTATAAAGAATTTG+AGG - chr2_3:4779109-4779128 Msa0273230:intron 35.0%
CTTGTAGAGCATAAAATCCT+GGG + chr2_3:4779187-4779206 None:intergenic 35.0%
TGCAGAAGAATCTTGTCTTA+AGG - chr2_3:4779354-4779373 Msa0273230:CDS 35.0%
TTAAGGATAGTAAATGTGGC+TGG - chr2_3:4779371-4779390 Msa0273230:CDS 35.0%
TAAGGATAGTAAATGTGGCT+GGG - chr2_3:4779372-4779391 Msa0273230:CDS 35.0%
!!! CTCAATGGATTTTTTGCAGT+AGG + chr2_3:4779557-4779576 None:intergenic 35.0%
AGCAAGTACTAAACCATTTG+GGG - chr2_3:4779678-4779697 Msa0273230:intron 35.0%
TTGATGGGATAATACCTATG+TGG + chr2_3:4779713-4779732 None:intergenic 35.0%
CATAGGTATTATCCCATCAA+TGG - chr2_3:4779713-4779732 Msa0273230:intron 35.0%
!! TTGGACCTTTTGTTTATGTG+TGG - chr2_3:4779993-4780012 Msa0273230:CDS 35.0%
AAGACTTATGATGCTGTTGT+TGG - chr2_3:4780029-4780048 Msa0273230:CDS 35.0%
AGACTTATGATGCTGTTGTT+GGG - chr2_3:4780030-4780049 Msa0273230:CDS 35.0%
!! AGCCACAATTCTAAGGTAAA+TGG + chr2_3:4780176-4780195 None:intergenic 35.0%
ATTTACCTTAGAATTGTGGC+TGG - chr2_3:4780175-4780194 Msa0273230:CDS 35.0%
TGAGATTGATATGGACCATT+GGG + chr2_3:4780419-4780438 None:intergenic 35.0%
TTGAGATTGATATGGACCAT+TGG + chr2_3:4780420-4780439 None:intergenic 35.0%
! TGTCTATGCTTTCATTTTGC+AGG - chr2_3:4780537-4780556 Msa0273230:CDS 35.0%
! GTCTATGCTTTCATTTTGCA+GGG - chr2_3:4780538-4780557 Msa0273230:CDS 35.0%
! TCTATGCTTTCATTTTGCAG+GGG - chr2_3:4780539-4780558 Msa0273230:CDS 35.0%
CACTGAATGTCTGTTACATT+TGG + chr2_3:4780684-4780703 None:intergenic 35.0%
CAAATGTAACAGACATTCAG+TGG - chr2_3:4780682-4780701 Msa0273230:CDS 35.0%
TTCACTCCTAGAACTAGATT+TGG - chr2_3:4780921-4780940 Msa0273230:CDS 35.0%
!! AATCCTCCAAATCTAGTTCT+AGG + chr2_3:4780930-4780949 None:intergenic 35.0%
TAGAACTAGATTTGGAGGAT+TGG - chr2_3:4780929-4780948 Msa0273230:CDS 35.0%
AGAACTAGATTTGGAGGATT+GGG - chr2_3:4780930-4780949 Msa0273230:CDS 35.0%
TTCGATACATCTTTCACTAG+AGG + chr2_3:4781170-4781189 None:intergenic 35.0%
AAAGTGGTTAATTTCCTCAC+AGG - chr2_3:4781238-4781257 Msa0273230:CDS 35.0%
GATACGAGTAGTTTGAATCT+TGG - chr2_3:4781290-4781309 Msa0273230:CDS 35.0%
GTTTGAATCTTGGAAGCTTA+TGG - chr2_3:4781300-4781319 Msa0273230:CDS 35.0%
TGCTAATACAAACCATCAAG+TGG - chr2_3:4781363-4781382 Msa0273230:CDS 35.0%
!! ATTGGATTTTAGCCACTTGA+TGG + chr2_3:4781378-4781397 None:intergenic 35.0%
! GGTGTAATATGTACGTCTTT+TGG + chr2_3:4781611-4781630 None:intergenic 35.0%
!! ACAGAAACTTTAGAACCACA+TGG - chr2_3:4781638-4781657 Msa0273230:five_prime_UTR 35.0%
GTTAGAGTAACTAGTTACTG+AGG - chr2_3:4781720-4781739 Msa0273230:five_prime_UTR 35.0%
GGAGCAACAACTTTGTTAGA+TGG + chr2_3:4777769-4777788 None:intergenic 40.0%
TCAAGACAAAGTTGGGTATG+AGG + chr2_3:4777845-4777864 None:intergenic 40.0%
CAAGGATTCTGGTAAGTTCA+TGG + chr2_3:4777918-4777937 None:intergenic 40.0%
CATGAACTTACCAGAATCCT+TGG - chr2_3:4777916-4777935 Msa0273230:CDS 40.0%
TACTTAGATGCCAAGGATTC+TGG + chr2_3:4777929-4777948 None:intergenic 40.0%
AGTAAGCTGTGAGGAAAAGA+AGG + chr2_3:4777973-4777992 None:intergenic 40.0%
GTGCTTGAGTAACAGTTGAA+AGG + chr2_3:4778101-4778120 None:intergenic 40.0%
CTCAAGCACTTGCAAGAATA+TGG - chr2_3:4778112-4778131 Msa0273230:CDS 40.0%
GAAAGAACAAGAAGTAGCCA+TGG - chr2_3:4778254-4778273 Msa0273230:CDS 40.0%
!! TGAAGTGTTGTTGTAGCTCT+GGG + chr2_3:4778289-4778308 None:intergenic 40.0%
!! TTGAAGTGTTGTTGTAGCTC+TGG + chr2_3:4778290-4778309 None:intergenic 40.0%
CTACTTCAAGAACTCCACAA+AGG - chr2_3:4778329-4778348 Msa0273230:CDS 40.0%
CATCTCTTCAGCTGCAATAA+AGG + chr2_3:4778472-4778491 None:intergenic 40.0%
! TTAGCTAGTCTCACCAGAAA+AGG + chr2_3:4778642-4778661 None:intergenic 40.0%
ATGCATTGCAGAAATAGTGC+AGG - chr2_3:4778683-4778702 Msa0273230:CDS 40.0%
AAATAGTGCAGGCTTATAGC+TGG - chr2_3:4778694-4778713 Msa0273230:CDS 40.0%
AAATTGGTGGAAGGACTAAG+CGG + chr2_3:4778824-4778843 None:intergenic 40.0%
GTAGAGAAGAAATTGGTGGA+AGG + chr2_3:4778833-4778852 None:intergenic 40.0%
TCCACCAATTTCTTCTCTAC+AGG - chr2_3:4778833-4778852 Msa0273230:CDS 40.0%
TCCTGTAGAGAAGAAATTGG+TGG + chr2_3:4778837-4778856 None:intergenic 40.0%
GGATCCTGTAGAGAAGAAAT+TGG + chr2_3:4778840-4778859 None:intergenic 40.0%
GCTGCAATCATCAGTAGAAA+TGG - chr2_3:4778923-4778942 Msa0273230:CDS 40.0%
! AGCTTCAAAAGTTGGACTAG+TGG - chr2_3:4778965-4778984 Msa0273230:intron 40.0%
AGCAAATTACTTACGCTCTC+CGG + chr2_3:4779014-4779033 None:intergenic 40.0%
CTACTACTCAGAAAGAAGCA+GGG - chr2_3:4779091-4779110 Msa0273230:intron 40.0%
! CTCAATTTCGGAGAACGTTT+TGG - chr2_3:4779132-4779151 Msa0273230:intron 40.0%
!! GTTTTGGTCAAAGAATCCAG+AGG - chr2_3:4779148-4779167 Msa0273230:intron 40.0%
GAGCATAAAATCCTGGGTAT+CGG + chr2_3:4779181-4779200 None:intergenic 40.0%
GCTTGTAGAGCATAAAATCC+TGG + chr2_3:4779188-4779207 None:intergenic 40.0%
GGCCATATTCAACTTGAATC+TGG - chr2_3:4779323-4779342 Msa0273230:CDS 40.0%
!! GGCCAGATTCAAGTTGAATA+TGG + chr2_3:4779328-4779347 None:intergenic 40.0%
CAAGATTCTTCTGCATGAGT+TGG + chr2_3:4779349-4779368 None:intergenic 40.0%
! TGCTTTTGGACTCAACAACA+TGG - chr2_3:4779413-4779432 Msa0273230:CDS 40.0%
TTTACTACAATCCACCATGC+AGG - chr2_3:4779437-4779456 Msa0273230:CDS 40.0%
! CAAAATGTTTCAGAGGTGTG+CGG - chr2_3:4779489-4779508 Msa0273230:intron 40.0%
CTTCTGACTGCAATTCTCAA+TGG + chr2_3:4779572-4779591 None:intergenic 40.0%
ATACTCAACCTTGACAAACC+TGG + chr2_3:4779609-4779628 None:intergenic 40.0%
AGGTTTGTCAAGGTTGAGTA+TGG - chr2_3:4779608-4779627 Msa0273230:intron 40.0%
ATGCAGAACCCACTATATTC+AGG + chr2_3:4779647-4779666 None:intergenic 40.0%
GGTTCAGCTTGTCTATAACA+AGG - chr2_3:4779751-4779770 Msa0273230:CDS 40.0%
TTGAGAGCTCCTCTATAGTA+TGG + chr2_3:4779893-4779912 None:intergenic 40.0%
GACTTATGATGCTGTTGTTG+GGG - chr2_3:4780031-4780050 Msa0273230:CDS 40.0%
CGGCAATCTTTCCTCTATTA+TGG + chr2_3:4780063-4780082 None:intergenic 40.0%
GGCACTGTAAAATCCACATA+CGG + chr2_3:4780083-4780102 None:intergenic 40.0%
GACAATCCTGATTCTGCATA+TGG + chr2_3:4780104-4780123 None:intergenic 40.0%
TGTAACCAGCCACAATTCTA+AGG + chr2_3:4780183-4780202 None:intergenic 40.0%
! TTAGAATTGTGGCTGGTTAC+AGG - chr2_3:4780182-4780201 Msa0273230:CDS 40.0%
ACTATGAGCGAAGAACAAAG+AGG + chr2_3:4780303-4780322 None:intergenic 40.0%
GAGATTGATATGGACCATTG+GGG + chr2_3:4780418-4780437 None:intergenic 40.0%
GAATACTGCAAGAGATACAC+TGG - chr2_3:4780897-4780916 Msa0273230:CDS 40.0%
ACTCCTAGAACTAGATTTGG+AGG - chr2_3:4780924-4780943 Msa0273230:CDS 40.0%
TTCATGCAGATGTTCCAGAA+AGG - chr2_3:4781140-4781159 Msa0273230:intron 40.0%
TGGGTTCTATATGTCATGTC+TGG - chr2_3:4781320-4781339 Msa0273230:CDS 40.0%
! TGATGAAAGGGTGTGGAAAA+AGG - chr2_3:4781445-4781464 Msa0273230:five_prime_UTR 40.0%
ATCGATTGTTCTTCGAGATC+AGG - chr2_3:4781533-4781552 Msa0273230:five_prime_UTR 40.0%
GGAGCAACAACTTTGTTAGA+TGG + chr2_3:4777769-4777788 None:intergenic 40.0%
TCAAGACAAAGTTGGGTATG+AGG + chr2_3:4777845-4777864 None:intergenic 40.0%
CAAGGATTCTGGTAAGTTCA+TGG + chr2_3:4777918-4777937 None:intergenic 40.0%
CATGAACTTACCAGAATCCT+TGG - chr2_3:4777916-4777935 Msa0273230:CDS 40.0%
TACTTAGATGCCAAGGATTC+TGG + chr2_3:4777929-4777948 None:intergenic 40.0%
AGTAAGCTGTGAGGAAAAGA+AGG + chr2_3:4777973-4777992 None:intergenic 40.0%
GTGCTTGAGTAACAGTTGAA+AGG + chr2_3:4778101-4778120 None:intergenic 40.0%
CTCAAGCACTTGCAAGAATA+TGG - chr2_3:4778112-4778131 Msa0273230:CDS 40.0%
GAAAGAACAAGAAGTAGCCA+TGG - chr2_3:4778254-4778273 Msa0273230:CDS 40.0%
!! TGAAGTGTTGTTGTAGCTCT+GGG + chr2_3:4778289-4778308 None:intergenic 40.0%
!! TTGAAGTGTTGTTGTAGCTC+TGG + chr2_3:4778290-4778309 None:intergenic 40.0%
CTACTTCAAGAACTCCACAA+AGG - chr2_3:4778329-4778348 Msa0273230:CDS 40.0%
CATCTCTTCAGCTGCAATAA+AGG + chr2_3:4778472-4778491 None:intergenic 40.0%
! TTAGCTAGTCTCACCAGAAA+AGG + chr2_3:4778642-4778661 None:intergenic 40.0%
ATGCATTGCAGAAATAGTGC+AGG - chr2_3:4778683-4778702 Msa0273230:CDS 40.0%
AAATAGTGCAGGCTTATAGC+TGG - chr2_3:4778694-4778713 Msa0273230:CDS 40.0%
AAATTGGTGGAAGGACTAAG+CGG + chr2_3:4778824-4778843 None:intergenic 40.0%
GTAGAGAAGAAATTGGTGGA+AGG + chr2_3:4778833-4778852 None:intergenic 40.0%
TCCACCAATTTCTTCTCTAC+AGG - chr2_3:4778833-4778852 Msa0273230:CDS 40.0%
TCCTGTAGAGAAGAAATTGG+TGG + chr2_3:4778837-4778856 None:intergenic 40.0%
GGATCCTGTAGAGAAGAAAT+TGG + chr2_3:4778840-4778859 None:intergenic 40.0%
GCTGCAATCATCAGTAGAAA+TGG - chr2_3:4778923-4778942 Msa0273230:CDS 40.0%
! AGCTTCAAAAGTTGGACTAG+TGG - chr2_3:4778965-4778984 Msa0273230:intron 40.0%
AGCAAATTACTTACGCTCTC+CGG + chr2_3:4779014-4779033 None:intergenic 40.0%
CTACTACTCAGAAAGAAGCA+GGG - chr2_3:4779091-4779110 Msa0273230:intron 40.0%
! CTCAATTTCGGAGAACGTTT+TGG - chr2_3:4779132-4779151 Msa0273230:intron 40.0%
!! GTTTTGGTCAAAGAATCCAG+AGG - chr2_3:4779148-4779167 Msa0273230:intron 40.0%
GAGCATAAAATCCTGGGTAT+CGG + chr2_3:4779181-4779200 None:intergenic 40.0%
GCTTGTAGAGCATAAAATCC+TGG + chr2_3:4779188-4779207 None:intergenic 40.0%
GGCCATATTCAACTTGAATC+TGG - chr2_3:4779323-4779342 Msa0273230:CDS 40.0%
!! GGCCAGATTCAAGTTGAATA+TGG + chr2_3:4779328-4779347 None:intergenic 40.0%
CAAGATTCTTCTGCATGAGT+TGG + chr2_3:4779349-4779368 None:intergenic 40.0%
! TGCTTTTGGACTCAACAACA+TGG - chr2_3:4779413-4779432 Msa0273230:CDS 40.0%
TTTACTACAATCCACCATGC+AGG - chr2_3:4779437-4779456 Msa0273230:CDS 40.0%
! CAAAATGTTTCAGAGGTGTG+CGG - chr2_3:4779489-4779508 Msa0273230:intron 40.0%
CTTCTGACTGCAATTCTCAA+TGG + chr2_3:4779572-4779591 None:intergenic 40.0%
ATACTCAACCTTGACAAACC+TGG + chr2_3:4779609-4779628 None:intergenic 40.0%
AGGTTTGTCAAGGTTGAGTA+TGG - chr2_3:4779608-4779627 Msa0273230:intron 40.0%
ATGCAGAACCCACTATATTC+AGG + chr2_3:4779647-4779666 None:intergenic 40.0%
GGTTCAGCTTGTCTATAACA+AGG - chr2_3:4779751-4779770 Msa0273230:CDS 40.0%
TTGAGAGCTCCTCTATAGTA+TGG + chr2_3:4779893-4779912 None:intergenic 40.0%
GACTTATGATGCTGTTGTTG+GGG - chr2_3:4780031-4780050 Msa0273230:CDS 40.0%
CGGCAATCTTTCCTCTATTA+TGG + chr2_3:4780063-4780082 None:intergenic 40.0%
GGCACTGTAAAATCCACATA+CGG + chr2_3:4780083-4780102 None:intergenic 40.0%
GACAATCCTGATTCTGCATA+TGG + chr2_3:4780104-4780123 None:intergenic 40.0%
TGTAACCAGCCACAATTCTA+AGG + chr2_3:4780183-4780202 None:intergenic 40.0%
! TTAGAATTGTGGCTGGTTAC+AGG - chr2_3:4780182-4780201 Msa0273230:CDS 40.0%
ACTATGAGCGAAGAACAAAG+AGG + chr2_3:4780303-4780322 None:intergenic 40.0%
GAGATTGATATGGACCATTG+GGG + chr2_3:4780418-4780437 None:intergenic 40.0%
GAATACTGCAAGAGATACAC+TGG - chr2_3:4780897-4780916 Msa0273230:CDS 40.0%
ACTCCTAGAACTAGATTTGG+AGG - chr2_3:4780924-4780943 Msa0273230:CDS 40.0%
TTCATGCAGATGTTCCAGAA+AGG - chr2_3:4781140-4781159 Msa0273230:intron 40.0%
TGGGTTCTATATGTCATGTC+TGG - chr2_3:4781320-4781339 Msa0273230:CDS 40.0%
! TGATGAAAGGGTGTGGAAAA+AGG - chr2_3:4781445-4781464 Msa0273230:five_prime_UTR 40.0%
ATCGATTGTTCTTCGAGATC+AGG - chr2_3:4781533-4781552 Msa0273230:five_prime_UTR 40.0%
CTCTTAAGGGAGGGAATTGA+AGG + chr2_3:4777805-4777824 None:intergenic 45.0%
CTTCAATTCCCTCCCTTAAG+AGG - chr2_3:4777803-4777822 Msa0273230:exon 45.0%
CTAGTCATGGCACCTCTTAA+GGG + chr2_3:4777818-4777837 None:intergenic 45.0%
ACTAGTCATGGCACCTCTTA+AGG + chr2_3:4777819-4777838 None:intergenic 45.0%
! GGTATGAGGAAGACTAGTCA+TGG + chr2_3:4777831-4777850 None:intergenic 45.0%
TCCATTGGGGTGATCATTGA+TGG - chr2_3:4778216-4778235 Msa0273230:CDS 45.0%
ACCATCAATGATCACCCCAA+TGG + chr2_3:4778220-4778239 None:intergenic 45.0%
! ACCAATTCTGATGGCCTTGA+GGG + chr2_3:4778358-4778377 None:intergenic 45.0%
! AACCAATTCTGATGGCCTTG+AGG + chr2_3:4778359-4778378 None:intergenic 45.0%
AACATGGCAAGAAGCAGCTA+TGG - chr2_3:4778530-4778549 Msa0273230:intron 45.0%
GGAGCTGCAAAGGATATGAT+AGG + chr2_3:4778585-4778604 None:intergenic 45.0%
! ATCAATGGTGGGGTAATGGT+AGG + chr2_3:4778606-4778625 None:intergenic 45.0%
TACCATTACCCCACCATTGA+TGG - chr2_3:4778605-4778624 Msa0273230:CDS 45.0%
! TTCCATCAATGGTGGGGTAA+TGG + chr2_3:4778610-4778629 None:intergenic 45.0%
!! ATCTACGAAGATGACGGGTA+CGG - chr2_3:4778732-4778751 Msa0273230:CDS 45.0%
TCTTCACTAACCAGCTGTTC+TGG + chr2_3:4778861-4778880 None:intergenic 45.0%
!! AGAATCGGTTTGGATGATCC+CGG - chr2_3:4778992-4779011 Msa0273230:intron 45.0%
GCAAATTACTTACGCTCTCC+GGG + chr2_3:4779013-4779032 None:intergenic 45.0%
! GGAGAGCGTAAGTAATTTGC+TGG - chr2_3:4779013-4779032 Msa0273230:intron 45.0%
CCTGCTTCTTTCTGAGTAGT+AGG + chr2_3:4779093-4779112 None:intergenic 45.0%
CCTACTACTCAGAAAGAAGC+AGG - chr2_3:4779090-4779109 Msa0273230:intron 45.0%
TATTTCCACCTTGTCCTGCA+TGG + chr2_3:4779454-4779473 None:intergenic 45.0%
TGCAGGACAAGGTGGAAATA+AGG - chr2_3:4779454-4779473 Msa0273230:CDS 45.0%
CAAGGTGGAAATAAGGTTGC+TGG - chr2_3:4779461-4779480 Msa0273230:CDS 45.0%
CTTGACAAACCTGGAAAACG+AGG + chr2_3:4779600-4779619 None:intergenic 45.0%
! CTCGTTTTCCAGGTTTGTCA+AGG - chr2_3:4779598-4779617 Msa0273230:intron 45.0%
TATATTCAGGCTCTCCACTC+TGG + chr2_3:4779634-4779653 None:intergenic 45.0%
AGTGGAGAGCCTGAATATAG+TGG - chr2_3:4779635-4779654 Msa0273230:intron 45.0%
GTGGAGAGCCTGAATATAGT+GGG - chr2_3:4779636-4779655 Msa0273230:intron 45.0%
!! CTAGTCTTGAGTTGATAGGG+AGG + chr2_3:4779846-4779865 None:intergenic 45.0%
CTCCCTATCAACTCAAGACT+AGG - chr2_3:4779844-4779863 Msa0273230:CDS 45.0%
!! GGCCTAGTCTTGAGTTGATA+GGG + chr2_3:4779849-4779868 None:intergenic 45.0%
!! AGGCCTAGTCTTGAGTTGAT+AGG + chr2_3:4779850-4779869 None:intergenic 45.0%
TGGGGACATGACCATAATAG+AGG - chr2_3:4780049-4780068 Msa0273230:CDS 45.0%
AGAGGAAAGATTGCCGTATG+TGG - chr2_3:4780067-4780086 Msa0273230:CDS 45.0%
ACAGTGCCATATGCAGAATC+AGG - chr2_3:4780095-4780114 Msa0273230:CDS 45.0%
ATGATAGTTCCGATGAAGCC+TGG - chr2_3:4780125-4780144 Msa0273230:CDS 45.0%
AGCGAAGAACAAAGAGGAGA+AGG + chr2_3:4780297-4780316 None:intergenic 45.0%
GAATCAAACTTGGTACTCCG+CGG - chr2_3:4780348-4780367 Msa0273230:CDS 45.0%
! TGTGTGAGTGTTGTAAACCG+CGG + chr2_3:4780368-4780387 None:intergenic 45.0%
CAACTTAACTCGAGTGGTGA+TGG - chr2_3:4780575-4780594 Msa0273230:CDS 45.0%
! AAGACTAGCTGTGTAGCTTG+AGG + chr2_3:4780631-4780650 None:intergenic 45.0%
GTTCGAGGATGTAACGTTGT+TGG + chr2_3:4781270-4781289 None:intergenic 45.0%
CAAACTACTCGTATCGTTCG+AGG + chr2_3:4781285-4781304 None:intergenic 45.0%
CAAGTCTTCATGTGGCTGAT+TGG + chr2_3:4781396-4781415 None:intergenic 45.0%
CTCTTAAGGGAGGGAATTGA+AGG + chr2_3:4777805-4777824 None:intergenic 45.0%
CTTCAATTCCCTCCCTTAAG+AGG - chr2_3:4777803-4777822 Msa0273230:exon 45.0%
CTAGTCATGGCACCTCTTAA+GGG + chr2_3:4777818-4777837 None:intergenic 45.0%
ACTAGTCATGGCACCTCTTA+AGG + chr2_3:4777819-4777838 None:intergenic 45.0%
! GGTATGAGGAAGACTAGTCA+TGG + chr2_3:4777831-4777850 None:intergenic 45.0%
TCCATTGGGGTGATCATTGA+TGG - chr2_3:4778216-4778235 Msa0273230:CDS 45.0%
ACCATCAATGATCACCCCAA+TGG + chr2_3:4778220-4778239 None:intergenic 45.0%
! ACCAATTCTGATGGCCTTGA+GGG + chr2_3:4778358-4778377 None:intergenic 45.0%
! AACCAATTCTGATGGCCTTG+AGG + chr2_3:4778359-4778378 None:intergenic 45.0%
AACATGGCAAGAAGCAGCTA+TGG - chr2_3:4778530-4778549 Msa0273230:intron 45.0%
GGAGCTGCAAAGGATATGAT+AGG + chr2_3:4778585-4778604 None:intergenic 45.0%
! ATCAATGGTGGGGTAATGGT+AGG + chr2_3:4778606-4778625 None:intergenic 45.0%
TACCATTACCCCACCATTGA+TGG - chr2_3:4778605-4778624 Msa0273230:CDS 45.0%
! TTCCATCAATGGTGGGGTAA+TGG + chr2_3:4778610-4778629 None:intergenic 45.0%
!! ATCTACGAAGATGACGGGTA+CGG - chr2_3:4778732-4778751 Msa0273230:CDS 45.0%
TCTTCACTAACCAGCTGTTC+TGG + chr2_3:4778861-4778880 None:intergenic 45.0%
!! AGAATCGGTTTGGATGATCC+CGG - chr2_3:4778992-4779011 Msa0273230:intron 45.0%
GCAAATTACTTACGCTCTCC+GGG + chr2_3:4779013-4779032 None:intergenic 45.0%
! GGAGAGCGTAAGTAATTTGC+TGG - chr2_3:4779013-4779032 Msa0273230:intron 45.0%
CCTGCTTCTTTCTGAGTAGT+AGG + chr2_3:4779093-4779112 None:intergenic 45.0%
CCTACTACTCAGAAAGAAGC+AGG - chr2_3:4779090-4779109 Msa0273230:intron 45.0%
TATTTCCACCTTGTCCTGCA+TGG + chr2_3:4779454-4779473 None:intergenic 45.0%
TGCAGGACAAGGTGGAAATA+AGG - chr2_3:4779454-4779473 Msa0273230:CDS 45.0%
CAAGGTGGAAATAAGGTTGC+TGG - chr2_3:4779461-4779480 Msa0273230:CDS 45.0%
CTTGACAAACCTGGAAAACG+AGG + chr2_3:4779600-4779619 None:intergenic 45.0%
! CTCGTTTTCCAGGTTTGTCA+AGG - chr2_3:4779598-4779617 Msa0273230:intron 45.0%
TATATTCAGGCTCTCCACTC+TGG + chr2_3:4779634-4779653 None:intergenic 45.0%
AGTGGAGAGCCTGAATATAG+TGG - chr2_3:4779635-4779654 Msa0273230:intron 45.0%
GTGGAGAGCCTGAATATAGT+GGG - chr2_3:4779636-4779655 Msa0273230:intron 45.0%
!! CTAGTCTTGAGTTGATAGGG+AGG + chr2_3:4779846-4779865 None:intergenic 45.0%
CTCCCTATCAACTCAAGACT+AGG - chr2_3:4779844-4779863 Msa0273230:CDS 45.0%
!! GGCCTAGTCTTGAGTTGATA+GGG + chr2_3:4779849-4779868 None:intergenic 45.0%
!! AGGCCTAGTCTTGAGTTGAT+AGG + chr2_3:4779850-4779869 None:intergenic 45.0%
TGGGGACATGACCATAATAG+AGG - chr2_3:4780049-4780068 Msa0273230:CDS 45.0%
AGAGGAAAGATTGCCGTATG+TGG - chr2_3:4780067-4780086 Msa0273230:CDS 45.0%
ACAGTGCCATATGCAGAATC+AGG - chr2_3:4780095-4780114 Msa0273230:CDS 45.0%
ATGATAGTTCCGATGAAGCC+TGG - chr2_3:4780125-4780144 Msa0273230:CDS 45.0%
AGCGAAGAACAAAGAGGAGA+AGG + chr2_3:4780297-4780316 None:intergenic 45.0%
GAATCAAACTTGGTACTCCG+CGG - chr2_3:4780348-4780367 Msa0273230:CDS 45.0%
! TGTGTGAGTGTTGTAAACCG+CGG + chr2_3:4780368-4780387 None:intergenic 45.0%
CAACTTAACTCGAGTGGTGA+TGG - chr2_3:4780575-4780594 Msa0273230:CDS 45.0%
! AAGACTAGCTGTGTAGCTTG+AGG + chr2_3:4780631-4780650 None:intergenic 45.0%
GTTCGAGGATGTAACGTTGT+TGG + chr2_3:4781270-4781289 None:intergenic 45.0%
CAAACTACTCGTATCGTTCG+AGG + chr2_3:4781285-4781304 None:intergenic 45.0%
CAAGTCTTCATGTGGCTGAT+TGG + chr2_3:4781396-4781415 None:intergenic 45.0%
TCATGGCACCTCTTAAGGGA+GGG + chr2_3:4777814-4777833 None:intergenic 50.0%
CTCCACAAAGGATACCCTCA+AGG - chr2_3:4778341-4778360 Msa0273230:CDS 50.0%
ACCCTCAAGGCCATCAGAAT+TGG - chr2_3:4778354-4778373 Msa0273230:intron 50.0%
ATGGCAAGAAGCAGCTATGG+TGG - chr2_3:4778533-4778552 Msa0273230:intron 50.0%
! GGTAATGGTAGGAGCTGCAA+AGG + chr2_3:4778595-4778614 None:intergenic 50.0%
ACCGAGCTTCCATCAATGGT+GGG + chr2_3:4778617-4778636 None:intergenic 50.0%
! CTGGTGAGACTAGCTAACAC+TGG - chr2_3:4778645-4778664 Msa0273230:CDS 50.0%
ACGGGTACGGTGGAGATTAT+GGG - chr2_3:4778745-4778764 Msa0273230:CDS 50.0%
TCTACAGGATCCAGAACAGC+TGG - chr2_3:4778848-4778867 Msa0273230:CDS 50.0%
!! GGGTATCGGTTATCTTCCTC+TGG + chr2_3:4779167-4779186 None:intergenic 50.0%
GAGGAAGATAACCGATACCC+AGG - chr2_3:4779167-4779186 Msa0273230:intron 50.0%
TGTGGCTGGGAAGAGTTACA+AGG - chr2_3:4779385-4779404 Msa0273230:CDS 50.0%
ACAATCCACCATGCAGGACA+AGG - chr2_3:4779443-4779462 Msa0273230:CDS 50.0%
! AATGTTTCAGAGGTGTGCGG+TGG - chr2_3:4779492-4779511 Msa0273230:intron 50.0%
AATATGGCCCGCGATCCAAA+GGG - chr2_3:4779521-4779540 Msa0273230:intron 50.0%
TGTTCCATCCCTTTGGATCG+CGG + chr2_3:4779532-4779551 None:intergenic 50.0%
GTAGGCATGTTCCATCCCTT+TGG + chr2_3:4779539-4779558 None:intergenic 50.0%
! GAAGCAGAACCTCGTTTTCC+AGG - chr2_3:4779588-4779607 Msa0273230:intron 50.0%
AAGGTTGAGTATGGCCAGAG+TGG - chr2_3:4779617-4779636 Msa0273230:intron 50.0%
GTGGAAGATCGTACCCCAAA+TGG + chr2_3:4779694-4779713 None:intergenic 50.0%
TGGGGTACGATCTTCCACAT+AGG - chr2_3:4779696-4779715 Msa0273230:intron 50.0%
!! GTCTTGAGTTGATAGGGAGG+AGG + chr2_3:4779843-4779862 None:intergenic 50.0%
!! AACATCCATGCTGACTCTCC+AGG + chr2_3:4780146-4780165 None:intergenic 50.0%
CTGAGCTGAAACTCTGGGTT+CGG + chr2_3:4780257-4780276 None:intergenic 50.0%
CTGTGCTGAGCTGAAACTCT+GGG + chr2_3:4780262-4780281 None:intergenic 50.0%
TTCAGCTCAGCACAGCTCTT+TGG - chr2_3:4780267-4780286 Msa0273230:CDS 50.0%
GCACAGCAACTTAACTCGAG+TGG - chr2_3:4780569-4780588 Msa0273230:CDS 50.0%
GTGACGGCGACTCATTTGTT+AGG - chr2_3:4780733-4780752 Msa0273230:CDS 50.0%
TCACTAGAGGAGAGCCTTTC+TGG + chr2_3:4781157-4781176 None:intergenic 50.0%
GTTGTTGGAGCAATCCTGTG+AGG + chr2_3:4781255-4781274 None:intergenic 50.0%
TCTGGTGGCAAGTCTTCATG+TGG + chr2_3:4781404-4781423 None:intergenic 50.0%
GAAGACTTGCCACCAGAAGA+AGG - chr2_3:4781407-4781426 Msa0273230:CDS 50.0%
TTGCCACCAGAAGAAGGCAA+CGG - chr2_3:4781413-4781432 Msa0273230:exon 50.0%
GTGGAAAAAGGCGATCGCAT+TGG - chr2_3:4781457-4781476 Msa0273230:five_prime_UTR 50.0%
TGATACCCCTGAGCATTCAC+AGG - chr2_3:4781571-4781590 Msa0273230:five_prime_UTR 50.0%
GAGTTCCTGTGAATGCTCAG+GGG + chr2_3:4781579-4781598 None:intergenic 50.0%
CGAGTTCCTGTGAATGCTCA+GGG + chr2_3:4781580-4781599 None:intergenic 50.0%
TCATGGCACCTCTTAAGGGA+GGG + chr2_3:4777814-4777833 None:intergenic 50.0%
CTCCACAAAGGATACCCTCA+AGG - chr2_3:4778341-4778360 Msa0273230:CDS 50.0%
ACCCTCAAGGCCATCAGAAT+TGG - chr2_3:4778354-4778373 Msa0273230:intron 50.0%
ATGGCAAGAAGCAGCTATGG+TGG - chr2_3:4778533-4778552 Msa0273230:intron 50.0%
! GGTAATGGTAGGAGCTGCAA+AGG + chr2_3:4778595-4778614 None:intergenic 50.0%
ACCGAGCTTCCATCAATGGT+GGG + chr2_3:4778617-4778636 None:intergenic 50.0%
! CTGGTGAGACTAGCTAACAC+TGG - chr2_3:4778645-4778664 Msa0273230:CDS 50.0%
ACGGGTACGGTGGAGATTAT+GGG - chr2_3:4778745-4778764 Msa0273230:CDS 50.0%
TCTACAGGATCCAGAACAGC+TGG - chr2_3:4778848-4778867 Msa0273230:CDS 50.0%
!! GGGTATCGGTTATCTTCCTC+TGG + chr2_3:4779167-4779186 None:intergenic 50.0%
GAGGAAGATAACCGATACCC+AGG - chr2_3:4779167-4779186 Msa0273230:intron 50.0%
TGTGGCTGGGAAGAGTTACA+AGG - chr2_3:4779385-4779404 Msa0273230:CDS 50.0%
ACAATCCACCATGCAGGACA+AGG - chr2_3:4779443-4779462 Msa0273230:CDS 50.0%
! AATGTTTCAGAGGTGTGCGG+TGG - chr2_3:4779492-4779511 Msa0273230:intron 50.0%
AATATGGCCCGCGATCCAAA+GGG - chr2_3:4779521-4779540 Msa0273230:intron 50.0%
TGTTCCATCCCTTTGGATCG+CGG + chr2_3:4779532-4779551 None:intergenic 50.0%
GTAGGCATGTTCCATCCCTT+TGG + chr2_3:4779539-4779558 None:intergenic 50.0%
! GAAGCAGAACCTCGTTTTCC+AGG - chr2_3:4779588-4779607 Msa0273230:intron 50.0%
AAGGTTGAGTATGGCCAGAG+TGG - chr2_3:4779617-4779636 Msa0273230:intron 50.0%
GTGGAAGATCGTACCCCAAA+TGG + chr2_3:4779694-4779713 None:intergenic 50.0%
TGGGGTACGATCTTCCACAT+AGG - chr2_3:4779696-4779715 Msa0273230:intron 50.0%
!! GTCTTGAGTTGATAGGGAGG+AGG + chr2_3:4779843-4779862 None:intergenic 50.0%
!! AACATCCATGCTGACTCTCC+AGG + chr2_3:4780146-4780165 None:intergenic 50.0%
CTGAGCTGAAACTCTGGGTT+CGG + chr2_3:4780257-4780276 None:intergenic 50.0%
CTGTGCTGAGCTGAAACTCT+GGG + chr2_3:4780262-4780281 None:intergenic 50.0%
TTCAGCTCAGCACAGCTCTT+TGG - chr2_3:4780267-4780286 Msa0273230:CDS 50.0%
GCACAGCAACTTAACTCGAG+TGG - chr2_3:4780569-4780588 Msa0273230:CDS 50.0%
GTGACGGCGACTCATTTGTT+AGG - chr2_3:4780733-4780752 Msa0273230:CDS 50.0%
TCACTAGAGGAGAGCCTTTC+TGG + chr2_3:4781157-4781176 None:intergenic 50.0%
GTTGTTGGAGCAATCCTGTG+AGG + chr2_3:4781255-4781274 None:intergenic 50.0%
TCTGGTGGCAAGTCTTCATG+TGG + chr2_3:4781404-4781423 None:intergenic 50.0%
GAAGACTTGCCACCAGAAGA+AGG - chr2_3:4781407-4781426 Msa0273230:CDS 50.0%
TTGCCACCAGAAGAAGGCAA+CGG - chr2_3:4781413-4781432 Msa0273230:exon 50.0%
GTGGAAAAAGGCGATCGCAT+TGG - chr2_3:4781457-4781476 Msa0273230:five_prime_UTR 50.0%
TGATACCCCTGAGCATTCAC+AGG - chr2_3:4781571-4781590 Msa0273230:five_prime_UTR 50.0%
GAGTTCCTGTGAATGCTCAG+GGG + chr2_3:4781579-4781598 None:intergenic 50.0%
CGAGTTCCTGTGAATGCTCA+GGG + chr2_3:4781580-4781599 None:intergenic 50.0%
GTCATGGCACCTCTTAAGGG+AGG + chr2_3:4777815-4777834 None:intergenic 55.0%
!! GCTCTGGGATGCAATGTCCA+TGG + chr2_3:4778274-4778293 None:intergenic 55.0%
!! GGCCTTGAGGGTATCCTTTG+TGG + chr2_3:4778346-4778365 None:intergenic 55.0%
GCAGCTATGGTGGCTGAAGT+AGG - chr2_3:4778543-4778562 Msa0273230:intron 55.0%
CCGAGCTTCCATCAATGGTG+GGG + chr2_3:4778616-4778635 None:intergenic 55.0%
CCCCACCATTGATGGAAGCT+CGG - chr2_3:4778613-4778632 Msa0273230:CDS 55.0%
CACCGAGCTTCCATCAATGG+TGG + chr2_3:4778618-4778637 None:intergenic 55.0%
CACCATTGATGGAAGCTCGG+TGG - chr2_3:4778616-4778635 Msa0273230:CDS 55.0%
!! TACGAAGATGACGGGTACGG+TGG - chr2_3:4778735-4778754 Msa0273230:CDS 55.0%
GACGGGTACGGTGGAGATTA+TGG - chr2_3:4778744-4778763 Msa0273230:CDS 55.0%
!! GATGCTAGCTCTGCTAGCTG+AGG - chr2_3:4778767-4778786 Msa0273230:CDS 55.0%
! TCTGCTAGCTGAGGCACTTC+AGG - chr2_3:4778776-4778795 Msa0273230:CDS 55.0%
! AGCTGAGGCACTTCAGGATG+TGG - chr2_3:4778782-4778801 Msa0273230:CDS 55.0%
ATCCACCATGCAGGACAAGG+TGG - chr2_3:4779446-4779465 Msa0273230:CDS 55.0%
TTCCACCTTGTCCTGCATGG+TGG + chr2_3:4779451-4779470 None:intergenic 55.0%
GAATATGGCCCGCGATCCAA+AGG - chr2_3:4779520-4779539 Msa0273230:intron 55.0%
GTTCCATCCCTTTGGATCGC+GGG + chr2_3:4779531-4779550 None:intergenic 55.0%
! GCTGACTCTCCAGGCTTCAT+CGG + chr2_3:4780137-4780156 None:intergenic 55.0%
TGAAGCCTGGAGAGTCAGCA+TGG - chr2_3:4780138-4780157 Msa0273230:CDS 55.0%
GCTGTGCTGAGCTGAAACTC+TGG + chr2_3:4780263-4780282 None:intergenic 55.0%
CCATTGGGGTCTAGTGCAAG+TGG + chr2_3:4780404-4780423 None:intergenic 55.0%
CCACTTGCACTAGACCCCAA+TGG - chr2_3:4780401-4780420 Msa0273230:CDS 55.0%
!! CTCGAGTGGTGATGGTCTCA+TGG - chr2_3:4780583-4780602 Msa0273230:CDS 55.0%
ACCAGAAGAAGGCAACGGCA+CGG - chr2_3:4781418-4781437 Msa0273230:exon 55.0%
ACGGCACGGCAAGTGATGAA+AGG - chr2_3:4781432-4781451 Msa0273230:five_prime_UTR 55.0%
CGGCACGGCAAGTGATGAAA+GGG - chr2_3:4781433-4781452 Msa0273230:five_prime_UTR 55.0%
CGGCAAGTGATGAAAGGGTG+TGG - chr2_3:4781438-4781457 Msa0273230:five_prime_UTR 55.0%
GCGAGTTCCTGTGAATGCTC+AGG + chr2_3:4781581-4781600 None:intergenic 55.0%
GTCATGGCACCTCTTAAGGG+AGG + chr2_3:4777815-4777834 None:intergenic 55.0%
!! GCTCTGGGATGCAATGTCCA+TGG + chr2_3:4778274-4778293 None:intergenic 55.0%
!! GGCCTTGAGGGTATCCTTTG+TGG + chr2_3:4778346-4778365 None:intergenic 55.0%
GCAGCTATGGTGGCTGAAGT+AGG - chr2_3:4778543-4778562 Msa0273230:intron 55.0%
CCGAGCTTCCATCAATGGTG+GGG + chr2_3:4778616-4778635 None:intergenic 55.0%
CCCCACCATTGATGGAAGCT+CGG - chr2_3:4778613-4778632 Msa0273230:CDS 55.0%
CACCGAGCTTCCATCAATGG+TGG + chr2_3:4778618-4778637 None:intergenic 55.0%
CACCATTGATGGAAGCTCGG+TGG - chr2_3:4778616-4778635 Msa0273230:CDS 55.0%
!! TACGAAGATGACGGGTACGG+TGG - chr2_3:4778735-4778754 Msa0273230:CDS 55.0%
GACGGGTACGGTGGAGATTA+TGG - chr2_3:4778744-4778763 Msa0273230:CDS 55.0%
!! GATGCTAGCTCTGCTAGCTG+AGG - chr2_3:4778767-4778786 Msa0273230:CDS 55.0%
! TCTGCTAGCTGAGGCACTTC+AGG - chr2_3:4778776-4778795 Msa0273230:CDS 55.0%
! AGCTGAGGCACTTCAGGATG+TGG - chr2_3:4778782-4778801 Msa0273230:CDS 55.0%
ATCCACCATGCAGGACAAGG+TGG - chr2_3:4779446-4779465 Msa0273230:CDS 55.0%
TTCCACCTTGTCCTGCATGG+TGG + chr2_3:4779451-4779470 None:intergenic 55.0%
GAATATGGCCCGCGATCCAA+AGG - chr2_3:4779520-4779539 Msa0273230:intron 55.0%
GTTCCATCCCTTTGGATCGC+GGG + chr2_3:4779531-4779550 None:intergenic 55.0%
! GCTGACTCTCCAGGCTTCAT+CGG + chr2_3:4780137-4780156 None:intergenic 55.0%
TGAAGCCTGGAGAGTCAGCA+TGG - chr2_3:4780138-4780157 Msa0273230:CDS 55.0%
GCTGTGCTGAGCTGAAACTC+TGG + chr2_3:4780263-4780282 None:intergenic 55.0%
CCATTGGGGTCTAGTGCAAG+TGG + chr2_3:4780404-4780423 None:intergenic 55.0%
CCACTTGCACTAGACCCCAA+TGG - chr2_3:4780401-4780420 Msa0273230:CDS 55.0%
!! CTCGAGTGGTGATGGTCTCA+TGG - chr2_3:4780583-4780602 Msa0273230:CDS 55.0%
ACCAGAAGAAGGCAACGGCA+CGG - chr2_3:4781418-4781437 Msa0273230:exon 55.0%
ACGGCACGGCAAGTGATGAA+AGG - chr2_3:4781432-4781451 Msa0273230:five_prime_UTR 55.0%
CGGCACGGCAAGTGATGAAA+GGG - chr2_3:4781433-4781452 Msa0273230:five_prime_UTR 55.0%
CGGCAAGTGATGAAAGGGTG+TGG - chr2_3:4781438-4781457 Msa0273230:five_prime_UTR 55.0%
GCGAGTTCCTGTGAATGCTC+AGG + chr2_3:4781581-4781600 None:intergenic 55.0%
GGCCACCGAGCTTCCATCAA+TGG + chr2_3:4778621-4778640 None:intergenic 60.0%
!! GGAAGCTCGGTGGCCTTTTC+TGG - chr2_3:4778626-4778645 Msa0273230:CDS 60.0%
TGTGCGGTGGCCTGGGAATA+TGG - chr2_3:4779505-4779524 Msa0273230:intron 60.0%
! GTGCCGTTGCCTTCTTCTGG+TGG + chr2_3:4781419-4781438 None:intergenic 60.0%
GGCCACCGAGCTTCCATCAA+TGG + chr2_3:4778621-4778640 None:intergenic 60.0%
!! GGAAGCTCGGTGGCCTTTTC+TGG - chr2_3:4778626-4778645 Msa0273230:CDS 60.0%
TGTGCGGTGGCCTGGGAATA+TGG - chr2_3:4779505-4779524 Msa0273230:intron 60.0%
! GTGCCGTTGCCTTCTTCTGG+TGG + chr2_3:4781419-4781438 None:intergenic 60.0%
! TTCAGAGGTGTGCGGTGGCC+TGG - chr2_3:4779497-4779516 Msa0273230:intron 65.0%
! TCAGAGGTGTGCGGTGGCCT+GGG - chr2_3:4779498-4779517 Msa0273230:intron 65.0%
GGATCGCGGGCCATATTCCC+AGG + chr2_3:4779518-4779537 None:intergenic 65.0%
TGGCCCGCGATCCAAAGGGA+TGG - chr2_3:4779525-4779544 Msa0273230:intron 65.0%
! GCCGTGCCGTTGCCTTCTTC+TGG + chr2_3:4781422-4781441 None:intergenic 65.0%
! TTCAGAGGTGTGCGGTGGCC+TGG - chr2_3:4779497-4779516 Msa0273230:intron 65.0%
! TCAGAGGTGTGCGGTGGCCT+GGG - chr2_3:4779498-4779517 Msa0273230:intron 65.0%
GGATCGCGGGCCATATTCCC+AGG + chr2_3:4779518-4779537 None:intergenic 65.0%
TGGCCCGCGATCCAAAGGGA+TGG - chr2_3:4779525-4779544 Msa0273230:intron 65.0%
! GCCGTGCCGTTGCCTTCTTC+TGG + chr2_3:4781422-4781441 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 4777708 4781813 4777708 ID=Msa0273230;Name=Msa0273230
chr2_3 mRNA 4777708 4781813 4777708 ID=Msa0273230-mRNA-1;Parent=Msa0273230;Name=Msa0273230-mRNA-1;_AED=0.38;_eAED=0.38;_QI=382|0.75|0.8|1|1|1|5|107|901
chr2_3 exon 4777708 4778372 4777708 ID=Msa0273230-mRNA-1:exon:2416;Parent=Msa0273230-mRNA-1
chr2_3 exon 4778565 4778962 4778565 ID=Msa0273230-mRNA-1:exon:2415;Parent=Msa0273230-mRNA-1
chr2_3 exon 4779318 4779489 4779318 ID=Msa0273230-mRNA-1:exon:2414;Parent=Msa0273230-mRNA-1
chr2_3 exon 4779749 4781040 4779749 ID=Msa0273230-mRNA-1:exon:2413;Parent=Msa0273230-mRNA-1
chr2_3 exon 4781146 4781813 4781146 ID=Msa0273230-mRNA-1:exon:2412;Parent=Msa0273230-mRNA-1
chr2_3 five_prime_UTR 4781432 4781813 4781432 ID=Msa0273230-mRNA-1:five_prime_utr;Parent=Msa0273230-mRNA-1
chr2_3 CDS 4781146 4781431 4781146 ID=Msa0273230-mRNA-1:cds;Parent=Msa0273230-mRNA-1
chr2_3 CDS 4779749 4781040 4779749 ID=Msa0273230-mRNA-1:cds;Parent=Msa0273230-mRNA-1
chr2_3 CDS 4779318 4779489 4779318 ID=Msa0273230-mRNA-1:cds;Parent=Msa0273230-mRNA-1
chr2_3 CDS 4778565 4778962 4778565 ID=Msa0273230-mRNA-1:cds;Parent=Msa0273230-mRNA-1
chr2_3 CDS 4777815 4778372 4777815 ID=Msa0273230-mRNA-1:cds;Parent=Msa0273230-mRNA-1
chr2_3 three_prime_UTR 4777708 4777814 4777708 ID=Msa0273230-mRNA-1:three_prime_utr;Parent=Msa0273230-mRNA-1
Gene Sequence

>Msa0273230

ATGCATTACCTTTCAACTGTTACTCAAGCACTTGCAAGAATATGGCTATTTTTTTTCTTACTCATCCCTTTTGCTCTCATTTACGGTATCCGAGATGAAACTATGAATTCAGACAACAAAGTTATATCCATTGGGGTGATCATTGATGGTGATTCTCGTATTGGGAAAGAACAAGAAGTAGCCATGGACATTGCATCCCAGAGCTACAACAACACTTCAAAGAACTACAAGTTAGCTCTCTACTTCAAGAACTCCACAAAGGATACCCTCAAGGCCATCAGAATTGCTGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGGATGCAAACATGGCAAGAAGCAGCTATGGTGGCTGAAGTAGGAAGCAAAGCTCAAGTTCCTATCATATCCTTTGCAGCTCCTACCATTACCCCACCATTGATGGAAGCTCGGTGGCCTTTTCTGGTGAGACTAGCTAACACTGGTACAGCATATATAAAATGCATTGCAGAAATAGTGCAGGCTTATAGCTGGAAGAAAGTAGTAGTAATCTACGAAGATGACGGGTACGGTGGAGATTATGGGATGCTAGCTCTGCTAGCTGAGGCACTTCAGGATGTGGATTCAATGATCGAGCACCGCTTAGTCCTTCCACCAATTTCTTCTCTACAGGATCCAGAACAGCTGGTTAGTGAAGAGATGCTAAAGTTAAAACAAACACAATCTCGGGTTTTCATAGTGCTGCAATCATCAGTAGAAATGGCAATTCATGTGTTCAAAGAAGCTTCAAAAGTTGGACTAGTGGATAAAGAATCGGTTTGGATGATCCCGGAGAGCGTAAGTAATTTGCTGGACTCTGTCAATAAGTCTGCTATTTCTTATATGGAAGGTGCTTTAGGAATTAAGACCTACTACTCAGAAAGAAGCAGGGAGTATAAAGAATTTGAGGCTCAATTTCGGAGAACGTTTTGGTCAAAGAATCCAGAGGAAGATAACCGATACCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAGCATTGTAACTCAAGCTTTGAACAGAATGAAAAGTAGGAACAATAGCAGCCCGAAGACTTTACTAAGAGAAATACAGTCTAGCAATTTCATTGGTTTAAGTGGCCATATTCAACTTGAATCTGGCCAACTCATGCAGAAGAATCTTGTCTTAAGGATAGTAAATGTGGCTGGGAAGAGTTACAAGGAATTATGCTTTTGGACTCAACAACATGGATTTACTACAATCCACCATGCAGGACAAGGTGGAAATAAGGTTGCTGGAAATACAAAATGTTTCAGAGGTGTGCGGTGGCCTGGGAATATGGCCCGCGATCCAAAGGGATGGAACATGCCTACTGCAAAAAATCCATTGAGAATTGCAGTCAGAAGCAGAACCTCGTTTTCCAGGTTTGTCAAGGTTGAGTATGGCCAGAGTGGAGAGCCTGAATATAGTGGGTTCTGCATTGAAATTTTTAAGCAAGTACTAAACCATTTGGGGTACGATCTTCCACATAGGTATTATCCCATCAATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGACTTATGATGCTGTTGTTGGGGACATGACCATAATAGAGGAAAGATTGCCGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCGATGAAGCCTGGAGAGTCAGCATGGATGTTTATGAAACCATTTACCTTAGAATTGTGGCTGGTTACAGGGGCAGAAATGCACAGCAACTTAACTCGAGTGGTGATGGTCTCATGGCTCTTTCTTGTATTGATTGTCACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTCACAGTTAAACAGTTGCGACCAAATGTAACAGACATTCAGTGGCTGAAGAACAACAACAAGAAAATTGGTTGTGACGGCGACTCATTTGTTAGGATGTTCCTAGAGAAAGTTGAAAAGTTCAAGCCAGAGAATATCATAAACATTACCGATGAATACAAATATGATGATGCATTCTCTAATAACAGCATAGCAGCTGCTTTTCTTGAGCTCCCATATGAAAAAGTATTCATCAGTGAATACTGCAAGAGATACACTGGATTCACTCCTAGAACTAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCTCCTCTAGTGAAAGATGTATCGAAAGCTATATTGCATCTCTCAGAAAATGCAGACTTGAAAAGATTGGAAGAAAAGTGGTTAATTTCCTCACAGGATTGCTCCAACAACGTTACATCCTCGAACGATACGAGTAGTTTGAATCTTGGAAGCTTATGGGTTCTATATGTCATGTCTGGTGCTACTTCTACTATTTGTGTGCTAATACAAACCATCAAGTGGCTAAAATCCAATCAGCCACATGAAGACTTGCCACCAGAAGAAGGCAACGGCACGGCAAGTGATGAAAGGGTGTGGAAAAAGGCGATCGCATTGGCGAAGCAGATTTATAGCAAAAAGAACAATAATTCAAGCAAGGAACAAGATGTAATCGATTGTTCTTCGAGATCAGGTCATTCGAGCATCGCTGATACCCCTGAGCATTCACAGGAACTCGCTTCTATACCAAAAGACGTACATATTACACCATATAACACAGAAACTTTAGAACCACATGGACATCAAAATAATTGTCATATCAGACACTGTACAAACCAACTTTAA
Protein sequence

>Msa0273230

MHYLSTVTQALARIWLFFFLLIPFALIYGIRDETMNSDNKVISIGVIIDGDSRIGKEQEVAMDIASQSYNNTSKNYKLALYFKNSTKDTLKAIRIAEEMINVQKVQVIIGMQTWQEAAMVAEVGSKAQVPIISFAAPTITPPLMEARWPFLVRLANTGTAYIKCIAEIVQAYSWKKVVVIYEDDGYGGDYGMLALLAEALQDVDSMIEHRLVLPPISSLQDPEQLVSEEMLKLKQTQSRVFIVLQSSVEMAIHVFKEASKVGLVDKESVWMIPESVSNLLDSVNKSAISYMEGALGIKTYYSERSREYKEFEAQFRRTFWSKNPEEDNRYPGFYALQAYDSISIVTQALNRMKSRNNSSPKTLLREIQSSNFIGLSGHIQLESGQLMQKNLVLRIVNVAGKSYKELCFWTQQHGFTTIHHAGQGGNKVAGNTKCFRGVRWPGNMARDPKGWNMPTAKNPLRIAVRSRTSFSRFVKVEYGQSGEPEYSGFCIEIFKQVLNHLGYDLPHRYYPINGTYNDLVQLVYNKTYDAVVGDMTIIEERLPYVDFTVPYAESGLSMIVPMKPGESAWMFMKPFTLELWLVTGAEMHSNLTRVVMVSWLFLVLIVTSSYTASLSSMLTVKQLRPNVTDIQWLKNNNKKIGCDGDSFVRMFLEKVEKFKPENIINITDEYKYDDAFSNNSIAAAFLELPYEKVFISEYCKRYTGFTPRTRFGGLGFMFQKGSPLVKDVSKAILHLSENADLKRLEEKWLISSQDCSNNVTSSNDTSSLNLGSLWVLYVMSGATSTICVLIQTIKWLKSNQPHEDLPPEEGNGTASDERVWKKAIALAKQIYSKKNNNSSKEQDVIDCSSRSGHSSIADTPEHSQELASIPKDVHITPYNTETLEPHGHQNNCHIRHCTNQL*