Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410960 | XP_013460015.1 | 96.857 | 350 | 11 | 0 | 1 | 350 | 1 | 350 | 0.0 | 690 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410960 | sp|Q94EG9|ZIP11_ARATH | 59.159 | 333 | 97 | 6 | 26 | 350 | 25 | 326 | 5.64e-129 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410960 | Q6VM15 | 96.857 | 350 | 11 | 0 | 1 | 350 | 1 | 350 | 0.0 | 690 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0410960 | 0.831040 | 2.090636e-55 | -8.615850e-47 |
| Msa0012780 | Msa0410960 | -0.818869 | 1.565173e-52 | -8.615850e-47 |
| Msa0012810 | Msa0410960 | -0.823046 | 1.709781e-53 | -8.615850e-47 |
| Msa0014790 | Msa0410960 | 0.849876 | 2.439416e-60 | -8.615850e-47 |
| Msa0017420 | Msa0410960 | 0.823984 | 1.031621e-53 | -8.615850e-47 |
| Msa0021980 | Msa0410960 | 0.808290 | 3.329826e-50 | -8.615850e-47 |
| Msa0025690 | Msa0410960 | 0.826681 | 2.373792e-54 | -8.615850e-47 |
| Msa0026120 | Msa0410960 | 0.820863 | 5.478988e-53 | -8.615850e-47 |
| Msa0026930 | Msa0410960 | 0.808045 | 3.756178e-50 | -8.615850e-47 |
| Msa0028280 | Msa0410960 | 0.806158 | 9.424637e-50 | -8.615850e-47 |
| Msa0030400 | Msa0410960 | 0.800965 | 1.124881e-48 | -8.615850e-47 |
| Msa0032290 | Msa0410960 | 0.811552 | 6.613820e-51 | -8.615850e-47 |
| Msa0043370 | Msa0410960 | 0.837575 | 4.793168e-57 | -8.615850e-47 |
| Msa0043450 | Msa0410960 | 0.808472 | 3.045828e-50 | -8.615850e-47 |
| Msa0043460 | Msa0410960 | 0.849381 | 3.354806e-60 | -8.615850e-47 |
| Msa0044320 | Msa0410960 | 0.829000 | 6.575401e-55 | -8.615850e-47 |
| Msa0046670 | Msa0410960 | 0.811657 | 6.274123e-51 | -8.615850e-47 |
| Msa0048950 | Msa0410960 | -0.809377 | 1.950100e-50 | -8.615850e-47 |
| Msa0050240 | Msa0410960 | 0.835541 | 1.580056e-56 | -8.615850e-47 |
| Msa0051100 | Msa0410960 | 0.801475 | 8.848549e-49 | -8.615850e-47 |
| Msa0053480 | Msa0410960 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0054760 | Msa0410960 | 0.818542 | 1.856107e-52 | -8.615850e-47 |
| Msa0059880 | Msa0410960 | -0.817904 | 2.588317e-52 | -8.615850e-47 |
| Msa0060080 | Msa0410960 | 0.820295 | 7.396417e-53 | -8.615850e-47 |
| Msa0063100 | Msa0410960 | 0.825837 | 3.769325e-54 | -8.615850e-47 |
| Msa0063170 | Msa0410960 | 0.816758 | 4.687909e-52 | -8.615850e-47 |
| Msa0067580 | Msa0410960 | 0.835830 | 1.335427e-56 | -8.615850e-47 |
| Msa0070740 | Msa0410960 | 0.807506 | 4.888544e-50 | -8.615850e-47 |
| Msa0072710 | Msa0410960 | 0.803976 | 2.695796e-49 | -8.615850e-47 |
| Msa0072830 | Msa0410960 | 0.824410 | 8.194896e-54 | -8.615850e-47 |
| Msa0072860 | Msa0410960 | 0.821764 | 3.395131e-53 | -8.615850e-47 |
| Msa0074220 | Msa0410960 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
| Msa0079690 | Msa0410960 | 0.801792 | 7.618916e-49 | -8.615850e-47 |
| Msa0088550 | Msa0410960 | 0.819470 | 1.142312e-52 | -8.615850e-47 |
| Msa0089010 | Msa0410960 | 0.844719 | 6.349698e-59 | -8.615850e-47 |
| Msa0101650 | Msa0410960 | 0.839932 | 1.178371e-57 | -8.615850e-47 |
| Msa0104360 | Msa0410960 | 0.831553 | 1.564307e-55 | -8.615850e-47 |
| Msa0104390 | Msa0410960 | 0.811084 | 8.355157e-51 | -8.615850e-47 |
| Msa0106110 | Msa0410960 | -0.840088 | 1.073245e-57 | -8.615850e-47 |
| Msa0106120 | Msa0410960 | -0.825633 | 4.214788e-54 | -8.615850e-47 |
| Msa0112800 | Msa0410960 | 0.800739 | 1.251060e-48 | -8.615850e-47 |
| Msa0121460 | Msa0410960 | 0.829794 | 4.215983e-55 | -8.615850e-47 |
| Msa0127210 | Msa0410960 | 0.812294 | 4.557181e-51 | -8.615850e-47 |
| Msa0131460 | Msa0410960 | -0.801914 | 7.192212e-49 | -8.615850e-47 |
| Msa0135360 | Msa0410960 | 0.818853 | 1.578333e-52 | -8.615850e-47 |
| Msa0137810 | Msa0410960 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0152660 | Msa0410960 | -0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0152740 | Msa0410960 | -0.813694 | 2.248782e-51 | -8.615850e-47 |
| Msa0153440 | Msa0410960 | 0.847190 | 1.352559e-59 | -8.615850e-47 |
| Msa0155030 | Msa0410960 | 0.819396 | 1.187019e-52 | -8.615850e-47 |
| Msa0164700 | Msa0410960 | 0.804775 | 1.837111e-49 | -8.615850e-47 |
| Msa0166580 | Msa0410960 | 0.808667 | 2.767176e-50 | -8.615850e-47 |
| Msa0180290 | Msa0410960 | 0.844462 | 7.446608e-59 | -8.615850e-47 |
| Msa0184030 | Msa0410960 | 0.809856 | 1.538629e-50 | -8.615850e-47 |
| Msa0199740 | Msa0410960 | 0.807126 | 5.885169e-50 | -8.615850e-47 |
| Msa0212490 | Msa0410960 | -0.829983 | 3.793246e-55 | -8.615850e-47 |
| Msa0218480 | Msa0410960 | 0.816142 | 6.440509e-52 | -8.615850e-47 |
| Msa0218590 | Msa0410960 | 0.819196 | 1.318476e-52 | -8.615850e-47 |
| Msa0222720 | Msa0410960 | 0.833442 | 5.319786e-56 | -8.615850e-47 |
| Msa0225370 | Msa0410960 | 0.852694 | 3.900975e-61 | -8.615850e-47 |
| Msa0227800 | Msa0410960 | 0.806535 | 7.847971e-50 | -8.615850e-47 |
| Msa0228090 | Msa0410960 | 0.807675 | 4.501699e-50 | -8.615850e-47 |
| Msa0232860 | Msa0410960 | 0.825038 | 5.827703e-54 | -8.615850e-47 |
| Msa0372250 | Msa0410960 | 0.801837 | 7.458072e-49 | -8.615850e-47 |
| Msa0375500 | Msa0410960 | -0.831766 | 1.386176e-55 | -8.615850e-47 |
| Msa0389050 | Msa0410960 | 0.843046 | 1.782101e-58 | -8.615850e-47 |
| Msa0393470 | Msa0410960 | 0.806670 | 7.348762e-50 | -8.615850e-47 |
| Msa0404870 | Msa0410960 | 0.807145 | 5.830948e-50 | -8.615850e-47 |
| Msa0406540 | Msa0410960 | 0.809130 | 2.202708e-50 | -8.615850e-47 |
| Msa0408160 | Msa0410960 | 0.844298 | 8.242688e-59 | -8.615850e-47 |
| Msa0409000 | Msa0410960 | 0.816978 | 4.185084e-52 | -8.615850e-47 |
| Msa0409820 | Msa0410960 | 0.818636 | 1.767468e-52 | -8.615850e-47 |
| Msa0410960 | Msa0423590 | 0.827714 | 1.343245e-54 | -8.615850e-47 |
| Msa0410960 | Msa0438440 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0410960 | Msa0439700 | 0.878546 | 2.573181e-69 | -8.615850e-47 |
| Msa0410960 | Msa0444310 | 0.814942 | 1.191399e-51 | -8.615850e-47 |
| Msa0410960 | Msa0451760 | 0.832369 | 9.834871e-56 | -8.615850e-47 |
| Msa0410960 | Msa0452010 | 0.849505 | 3.098173e-60 | -8.615850e-47 |
| Msa0410960 | Msa0452120 | 0.809392 | 1.935238e-50 | -8.615850e-47 |
| Msa0410960 | Msa0452180 | 0.808504 | 2.998329e-50 | -8.615850e-47 |
| Msa0410960 | Msa0452370 | 0.818212 | 2.205526e-52 | -8.615850e-47 |
| Msa0410960 | Msa0452490 | 0.831898 | 1.285404e-55 | -8.615850e-47 |
| Msa0410960 | Msa0452680 | 0.828112 | 1.077618e-54 | -8.615850e-47 |
| Msa0410960 | Msa0453220 | 0.836188 | 1.082999e-56 | -8.615850e-47 |
| Msa0410960 | Msa0455260 | 0.898959 | 3.180083e-77 | -8.615850e-47 |
| Msa0410960 | Msa0457370 | 0.817535 | 3.136095e-52 | -8.615850e-47 |
| Msa0410960 | Msa0466740 | 0.802305 | 5.974535e-49 | -8.615850e-47 |
| Msa0410960 | Msa0470650 | 0.811012 | 8.661794e-51 | -8.615850e-47 |
| Msa0410960 | Msa0471210 | -0.825530 | 4.458234e-54 | -8.615850e-47 |
| Msa0410960 | Msa0481320 | 0.821452 | 4.007558e-53 | -8.615850e-47 |
| Msa0410960 | Msa0499580 | 0.818131 | 2.300727e-52 | -8.615850e-47 |
| Msa0410960 | Msa0501470 | 0.803031 | 4.232714e-49 | -8.615850e-47 |
| Msa0410960 | Msa0503620 | 0.991511 | 4.860818e-188 | -8.615850e-47 |
| Msa0410960 | Msa0512430 | 0.813651 | 2.297691e-51 | -8.615850e-47 |
| Msa0410960 | Msa0515680 | 0.802113 | 6.544837e-49 | -8.615850e-47 |
| Msa0410960 | Msa0521100 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0410960 | Msa0539320 | 0.800149 | 1.649965e-48 | -8.615850e-47 |
| Msa0410960 | Msa0540160 | 0.846831 | 1.696159e-59 | -8.615850e-47 |
| Msa0410960 | Msa0543310 | 0.856077 | 4.105352e-62 | -8.615850e-47 |
| Msa0410960 | Msa0543740 | -0.806403 | 8.367079e-50 | -8.615850e-47 |
| Msa0410960 | Msa0544930 | 0.825661 | 4.150694e-54 | -8.615850e-47 |
| Msa0410960 | Msa0553290 | 0.805989 | 1.022560e-49 | -8.615850e-47 |
| Msa0410960 | Msa0555980 | 0.801529 | 8.624179e-49 | -8.615850e-47 |
| Msa0410960 | Msa0563140 | 0.812415 | 4.288891e-51 | -8.615850e-47 |
| Msa0410960 | Msa0565150 | 0.825441 | 4.681030e-54 | -8.615850e-47 |
| Msa0410960 | Msa0565530 | 0.855358 | 6.654337e-62 | -8.615850e-47 |
| Msa0410960 | Msa0567620 | 0.807923 | 3.986570e-50 | -8.615850e-47 |
| Msa0410960 | Msa0568120 | 0.847491 | 1.118246e-59 | -8.615850e-47 |
| Msa0410960 | Msa0570250 | 0.804861 | 1.762758e-49 | -8.615850e-47 |
| Msa0410960 | Msa0570490 | 0.806440 | 8.216335e-50 | -8.615850e-47 |
| Msa0410960 | Msa0575540 | 0.805271 | 1.446810e-49 | -8.615850e-47 |
| Msa0410960 | Msa0589610 | 0.826684 | 2.369506e-54 | -8.615850e-47 |
| Msa0410960 | Msa0599250 | 0.841553 | 4.432799e-58 | -8.615850e-47 |
| Msa0410960 | Msa0605020 | -0.822345 | 2.488974e-53 | -8.615850e-47 |
| Msa0410960 | Msa0607390 | 0.804419 | 2.180247e-49 | -8.615850e-47 |
| Msa0410960 | Msa0607400 | 0.806455 | 8.156977e-50 | -8.615850e-47 |
| Msa0410960 | Msa0607410 | 0.820638 | 6.170962e-53 | -8.615850e-47 |
| Msa0410960 | Msa0607440 | 0.809098 | 2.237854e-50 | -8.615850e-47 |
| Msa0410960 | Msa0613480 | 0.806101 | 9.685491e-50 | -8.615850e-47 |
| Msa0410960 | Msa0617370 | 0.820283 | 7.444539e-53 | -8.615850e-47 |
| Msa0410960 | Msa0625310 | 0.811622 | 6.385889e-51 | -8.615850e-47 |
| Msa0410960 | Msa0629960 | 0.822964 | 1.787044e-53 | -8.615850e-47 |
| Msa0410960 | Msa0630000 | 0.801626 | 8.237953e-49 | -8.615850e-47 |
| Msa0410960 | Msa0635130 | 0.814426 | 1.549808e-51 | -8.615850e-47 |
| Msa0410960 | Msa0639880 | 0.809645 | 1.708310e-50 | -8.615850e-47 |
| Msa0410960 | Msa0641020 | 0.831926 | 1.265373e-55 | -8.615850e-47 |
| Msa0410960 | Msa0641030 | 0.829164 | 5.999315e-55 | -8.615850e-47 |
| Msa0410960 | Msa0646670 | -0.816719 | 4.783562e-52 | -8.615850e-47 |
| Msa0410960 | Msa0648250 | 0.815976 | 7.012804e-52 | -8.615850e-47 |
| Msa0410960 | Msa0661040 | 0.846415 | 2.203213e-59 | -8.615850e-47 |
| Msa0410960 | Msa0668000 | 0.809604 | 1.742878e-50 | -8.615850e-47 |
| Msa0410960 | Msa0668160 | 0.804738 | 1.870636e-49 | -8.615850e-47 |
| Msa0410960 | Msa0677840 | 0.807477 | 4.959485e-50 | -8.615850e-47 |
| Msa0410960 | Msa0678240 | 0.852826 | 3.578223e-61 | -8.615850e-47 |
| Msa0410960 | Msa0678620 | -0.820512 | 6.596125e-53 | -8.615850e-47 |
| Msa0410960 | Msa0679560 | 0.843278 | 1.545756e-58 | -8.615850e-47 |
| Msa0410960 | Msa0691190 | 0.821193 | 4.598479e-53 | -8.615850e-47 |
| Msa0410960 | Msa0692000 | 0.859849 | 3.110790e-63 | -8.615850e-47 |
| Msa0410960 | Msa0705710 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0410960 | Msa0712100 | 0.802704 | 4.945509e-49 | -8.615850e-47 |
| Msa0410960 | Msa0716740 | -0.808336 | 3.256426e-50 | -8.615850e-47 |
| Msa0410960 | Msa0718920 | 0.810828 | 9.493457e-51 | -8.615850e-47 |
| Msa0410960 | Msa0727480 | -0.808628 | 2.821257e-50 | -8.615850e-47 |
| Msa0410960 | Msa0729920 | 0.822046 | 2.920974e-53 | -8.615850e-47 |
| Msa0410960 | Msa0734020 | -0.809752 | 1.619847e-50 | -8.615850e-47 |
| Msa0410960 | Msa0739390 | 0.818906 | 1.535170e-52 | -8.615850e-47 |
| Msa0410960 | Msa0748050 | 0.841018 | 6.128331e-58 | -8.615850e-47 |
| Msa0410960 | Msa0749900 | 0.809918 | 1.492291e-50 | -8.615850e-47 |
| Msa0410960 | Msa0752540 | 0.844462 | 7.448353e-59 | -8.615850e-47 |
| Msa0410960 | Msa0752580 | 0.879838 | 8.983571e-70 | -8.615850e-47 |
| Msa0410960 | Msa0754190 | 0.830709 | 2.520810e-55 | -8.615850e-47 |
| Msa0410960 | Msa0754500 | 0.873419 | 1.491915e-67 | -8.615850e-47 |
| Msa0410960 | Msa0756410 | 0.826540 | 2.565061e-54 | -8.615850e-47 |
| Msa0410960 | Msa0756480 | 0.805741 | 1.153258e-49 | -8.615850e-47 |
| Msa0410960 | Msa0763270 | 0.828685 | 7.834393e-55 | -8.615850e-47 |
| Msa0410960 | Msa0763280 | 0.833615 | 4.816211e-56 | -8.615850e-47 |
| Msa0410960 | Msa0770890 | 0.821471 | 3.967171e-53 | -8.615850e-47 |
| Msa0410960 | Msa0774560 | 0.813095 | 3.044129e-51 | -8.615850e-47 |
| Msa0410960 | Msa0782090 | 0.800877 | 1.172766e-48 | -8.615850e-47 |
| Msa0410960 | Msa0784710 | 0.809513 | 1.823455e-50 | -8.615850e-47 |
| Msa0410960 | Msa0797010 | 0.822417 | 2.396110e-53 | -8.615850e-47 |
| Msa0410960 | Msa0807130 | 0.828204 | 1.023753e-54 | -8.615850e-47 |
| Msa0410960 | Msa0808190 | 0.843045 | 1.783755e-58 | -8.615850e-47 |
| Msa0410960 | Msa0812330 | -0.809141 | 2.191416e-50 | -8.615850e-47 |
| Msa0410960 | Msa0813030 | 0.815285 | 9.996883e-52 | -8.615850e-47 |
| Msa0410960 | Msa0814780 | 0.807267 | 5.495822e-50 | -8.615850e-47 |
| Msa0410960 | Msa0819740 | 0.808797 | 2.595920e-50 | -8.615850e-47 |
| Msa0410960 | Msa0829110 | 0.820849 | 5.520150e-53 | -8.615850e-47 |
| Msa0410960 | Msa0829430 | 0.820476 | 6.723592e-53 | -8.615850e-47 |
| Msa0410960 | Msa0830120 | 0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa0410960 | Msa0830450 | 0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0410960 | Msa0830900 | 0.857364 | 1.716875e-62 | -8.615850e-47 |
| Msa0410960 | Msa0833060 | 0.817003 | 4.131341e-52 | -8.615850e-47 |
| Msa0410960 | Msa0833080 | 0.820924 | 5.305165e-53 | -8.615850e-47 |
| Msa0410960 | Msa0834690 | 0.820767 | 5.764695e-53 | -8.615850e-47 |
| Msa0410960 | Msa0835510 | 0.818753 | 1.663104e-52 | -8.615850e-47 |
| Msa0410960 | Msa0835580 | 0.830793 | 2.403811e-55 | -8.615850e-47 |
| Msa0410960 | Msa0839480 | 0.812416 | 4.286459e-51 | -8.615850e-47 |
| Msa0410960 | Msa0840630 | 0.838217 | 3.279432e-57 | -8.615850e-47 |
| Msa0410960 | Msa0849130 | 0.893010 | 9.355491e-75 | -8.615850e-47 |
| Msa0410960 | Msa0852980 | -0.815486 | 9.018696e-52 | -8.615850e-47 |
| Msa0410960 | Msa0853500 | 0.809168 | 2.162200e-50 | -8.615850e-47 |
| Msa0410960 | Msa0883350 | 0.818975 | 1.480166e-52 | -8.615850e-47 |
| Msa0410960 | Msa0883390 | 0.841600 | 4.307333e-58 | -8.615850e-47 |
| Msa0410960 | Msa0883410 | 0.847896 | 8.650575e-60 | -8.615850e-47 |
| Msa0410960 | Msa0883430 | 0.845227 | 4.632097e-59 | -8.615850e-47 |
| Msa0410960 | Msa0883450 | 0.817306 | 3.531543e-52 | -8.615850e-47 |
| Msa0410960 | Msa0883640 | -0.800766 | 1.235261e-48 | -8.615850e-47 |
| Msa0410960 | Msa0883660 | 0.834242 | 3.356135e-56 | -8.615850e-47 |
| Msa0410960 | Msa0883670 | 0.834344 | 3.163902e-56 | -8.615850e-47 |
| Msa0410960 | Msa0883690 | 0.842222 | 2.950275e-58 | -8.615850e-47 |
| Msa0410960 | Msa0886660 | 0.820361 | 7.143043e-53 | -8.615850e-47 |
| Msa0410960 | Msa0887000 | 0.806645 | 7.437752e-50 | -8.615850e-47 |
| Msa0410960 | Msa0904630 | 0.805343 | 1.397313e-49 | -8.615850e-47 |
| Msa0410960 | Msa0905170 | 0.806937 | 6.452265e-50 | -8.615850e-47 |
| Msa0410960 | Msa0910830 | -0.806019 | 1.008092e-49 | -8.615850e-47 |
| Msa0410960 | Msa0911910 | 0.812488 | 4.134218e-51 | -8.615850e-47 |
| Msa0410960 | Msa0912160 | 0.856049 | 4.184233e-62 | -8.615850e-47 |
| Msa0410960 | Msa0912220 | 0.812347 | 4.438465e-51 | -8.615850e-47 |
| Msa0410960 | Msa0912230 | 0.805127 | 1.550600e-49 | -8.615850e-47 |
| Msa0410960 | Msa0919490 | 0.811985 | 5.322424e-51 | -8.615850e-47 |
| Msa0410960 | Msa0929400 | 0.819134 | 1.362128e-52 | -8.615850e-47 |
| Msa0410960 | Msa0936650 | 0.808001 | 3.837876e-50 | -8.615850e-47 |
| Msa0410960 | Msa0948050 | -0.804407 | 2.192309e-49 | -8.615850e-47 |
| Msa0410960 | Msa0957800 | 0.835041 | 2.113492e-56 | -8.615850e-47 |
| Msa0410960 | Msa0960090 | -0.802787 | 4.753222e-49 | -8.615850e-47 |
| Msa0410960 | Msa0964150 | 0.831552 | 1.564543e-55 | -8.615850e-47 |
| Msa0410960 | Msa0981730 | 0.804875 | 1.750824e-49 | -8.615850e-47 |
| Msa0410960 | Msa0984820 | 0.830302 | 3.170172e-55 | -8.615850e-47 |
| Msa0410960 | Msa0984830 | 0.837597 | 4.731657e-57 | -8.615850e-47 |
| Msa0410960 | Msa0984840 | 0.836852 | 7.340414e-57 | -8.615850e-47 |
| Msa0410960 | Msa0984850 | 0.816324 | 5.865216e-52 | -8.615850e-47 |
| Msa0410960 | Msa0985040 | 0.817525 | 3.151952e-52 | -8.615850e-47 |
| Msa0410960 | Msa0985700 | -0.801265 | 9.768319e-49 | -8.615850e-47 |
| Msa0410960 | Msa0987860 | 0.835350 | 1.766221e-56 | -8.615850e-47 |
| Msa0410960 | Msa1008340 | 0.827814 | 1.270794e-54 | -8.615850e-47 |
| Msa0410960 | Msa1009150 | 0.883432 | 4.510126e-71 | -8.615850e-47 |
| Msa0410960 | Msa1009170 | 0.911507 | 5.623077e-83 | -8.615850e-47 |
| Msa0410960 | Msa1009220 | 0.840449 | 8.638910e-58 | -8.615850e-47 |
| Msa0410960 | Msa1014120 | 0.835371 | 1.745050e-56 | -8.615850e-47 |
| Msa0410960 | Msa1033670 | 0.808644 | 2.799297e-50 | -8.615850e-47 |
| Msa0410960 | Msa1038820 | 0.825186 | 5.376761e-54 | -8.615850e-47 |
| Msa0410960 | Msa1043020 | 0.801888 | 7.281346e-49 | -8.615850e-47 |
| Msa0410960 | Msa1049950 | 0.814048 | 1.878965e-51 | -8.615850e-47 |
| Msa0410960 | Msa1050500 | 0.800314 | 1.527247e-48 | -8.615850e-47 |
| Msa0410960 | Msa1052030 | 0.813231 | 2.841441e-51 | -8.615850e-47 |
| Msa0410960 | Msa1052080 | 0.826795 | 2.229982e-54 | -8.615850e-47 |
| Msa0410960 | Msa1081530 | 0.821431 | 4.051626e-53 | -8.615850e-47 |
| Msa0410960 | Msa1081700 | 0.829196 | 5.893139e-55 | -8.615850e-47 |
| Msa0410960 | Msa1096510 | 0.806723 | 7.162251e-50 | -8.615850e-47 |
| Msa0410960 | Msa1096520 | 0.803412 | 3.530240e-49 | -8.615850e-47 |
| Msa0410960 | Msa1098340 | 0.860675 | 1.750534e-63 | -8.615850e-47 |
| Msa0410960 | Msa1098350 | 0.894817 | 1.725419e-75 | -8.615850e-47 |
| Msa0410960 | Msa1106320 | 0.810919 | 9.070667e-51 | -8.615850e-47 |
| Msa0410960 | Msa1107830 | 0.836176 | 1.090798e-56 | -8.615850e-47 |
| Msa0410960 | Msa1109890 | -0.824645 | 7.214849e-54 | -8.615850e-47 |
| Msa0410960 | Msa1113280 | 0.830560 | 2.741341e-55 | -8.615850e-47 |
| Msa0410960 | Msa1116850 | 0.803657 | 3.139638e-49 | -8.615850e-47 |
| Msa0410960 | Msa1133180 | 0.806420 | 8.296292e-50 | -8.615850e-47 |
| Msa0410960 | Msa1135130 | 0.809583 | 1.760923e-50 | -8.615850e-47 |
| Msa0410960 | Msa1135660 | 0.849817 | 2.534830e-60 | -8.615850e-47 |
| Msa0410960 | Msa1138440 | 0.810675 | 1.024257e-50 | -8.615850e-47 |
| Msa0410960 | Msa1138450 | 0.820293 | 7.406708e-53 | -8.615850e-47 |
| Msa0410960 | Msa1138480 | 0.880021 | 7.730339e-70 | -8.615850e-47 |
| Msa0410960 | Msa1138490 | 0.888733 | 4.542345e-73 | -8.615850e-47 |
| Msa0410960 | Msa1139240 | 0.833317 | 5.717123e-56 | -8.615850e-47 |
| Msa0410960 | Msa1140460 | 0.802082 | 6.642279e-49 | -8.615850e-47 |
| Msa0410960 | Msa1145930 | 0.832651 | 8.371926e-56 | -8.615850e-47 |
| Msa0410960 | Msa1151550 | 0.819572 | 1.082665e-52 | -8.615850e-47 |
| Msa0410960 | Msa1157310 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0410960 | Msa1182400 | 0.827192 | 1.791458e-54 | -8.615850e-47 |
| Msa0410960 | Msa1182480 | 0.806104 | 9.671444e-50 | -8.615850e-47 |
| Msa0410960 | Msa1182780 | 0.830194 | 3.368545e-55 | -8.615850e-47 |
| Msa0410960 | Msa1182830 | 0.814193 | 1.744958e-51 | -8.615850e-47 |
| Msa0410960 | Msa1191390 | 0.812142 | 4.919190e-51 | -8.615850e-47 |
| Msa0410960 | Msa1199670 | 0.843651 | 1.229057e-58 | -8.615850e-47 |
| Msa0410960 | Msa1199750 | 0.862563 | 4.639779e-64 | -8.615850e-47 |
| Msa0410960 | Msa1204430 | 0.870015 | 2.007862e-66 | -8.615850e-47 |
| Msa0410960 | Msa1204500 | 0.801232 | 9.921468e-49 | -8.615850e-47 |
| Msa0410960 | Msa1204660 | 0.823120 | 1.643624e-53 | -8.615850e-47 |
| Msa0410960 | Msa1204710 | 0.839460 | 1.564020e-57 | -8.615850e-47 |
| Msa0410960 | Msa1204720 | 0.820954 | 5.218889e-53 | -8.615850e-47 |
| Msa0410960 | Msa1205520 | 0.817001 | 4.134238e-52 | -8.615850e-47 |
| Msa0410960 | Msa1208250 | 0.832767 | 7.834026e-56 | -8.615850e-47 |
| Msa0410960 | Msa1212740 | 0.821366 | 4.194052e-53 | -8.615850e-47 |
| Msa0410960 | Msa1212960 | 0.814821 | 1.267064e-51 | -8.615850e-47 |
| Msa0410960 | Msa1214960 | -0.801540 | 8.581781e-49 | -8.615850e-47 |
| Msa0410960 | Msa1230190 | 0.819112 | 1.378137e-52 | -8.615850e-47 |
| Msa0410960 | Msa1232330 | 0.869911 | 2.170874e-66 | -8.615850e-47 |
| Msa0410960 | Msa1238130 | 0.821270 | 4.414787e-53 | -8.615850e-47 |
| Msa0410960 | Msa1246560 | 0.802016 | 6.853057e-49 | -8.615850e-47 |
| Msa0410960 | Msa1247720 | 0.838155 | 3.401411e-57 | -8.615850e-47 |
| Msa0410960 | Msa1247860 | 0.813079 | 3.068399e-51 | -8.615850e-47 |
| Msa0410960 | Msa1258200 | 0.812496 | 4.117398e-51 | -8.615850e-47 |
| Msa0410960 | Msa1274810 | 0.817599 | 3.034023e-52 | -8.615850e-47 |
| Msa0410960 | Msa1275340 | 0.875444 | 3.065852e-68 | -8.615850e-47 |
| Msa0410960 | Msa1276070 | 0.803389 | 3.568958e-49 | -8.615850e-47 |
| Msa0410960 | Msa1277580 | 0.800173 | 1.631759e-48 | -8.615850e-47 |
| Msa0410960 | Msa1279310 | 0.869602 | 2.737351e-66 | -8.615850e-47 |
| Msa0410960 | Msa1279320 | 0.832981 | 6.931202e-56 | -8.615850e-47 |
| Msa0410960 | Msa1279330 | 0.867729 | 1.103829e-65 | -8.615850e-47 |
| Msa0410960 | Msa1279860 | 0.839776 | 1.294235e-57 | -8.615850e-47 |
| Msa0410960 | Msa1279870 | 0.838908 | 2.173690e-57 | -8.615850e-47 |
| Msa0410960 | Msa1285830 | 0.809669 | 1.688026e-50 | -8.615850e-47 |
| Msa0410960 | Msa1287640 | 0.803469 | 3.434498e-49 | -8.615850e-47 |
| Msa0410960 | Msa1287690 | 0.810445 | 1.148379e-50 | -8.615850e-47 |
| Msa0410960 | Msa1296650 | 0.847478 | 1.127191e-59 | -8.615850e-47 |
| Msa0410960 | Msa1296730 | 0.819886 | 9.177556e-53 | -8.615850e-47 |
| Msa0410960 | Msa1297540 | 0.818904 | 1.536469e-52 | -8.615850e-47 |
| Msa0410960 | Msa1297720 | 0.843939 | 1.029015e-58 | -8.615850e-47 |
| Msa0410960 | Msa1311150 | 0.801399 | 9.173004e-49 | -8.615850e-47 |
| Msa0410960 | Msa1311550 | 0.867247 | 1.574671e-65 | -8.615850e-47 |
| Msa0410960 | Msa1319440 | 0.806459 | 8.141383e-50 | -8.615850e-47 |
| Msa0410960 | Msa1328600 | 0.872185 | 3.861652e-67 | -8.615850e-47 |
| Msa0410960 | Msa1330960 | 0.818384 | 2.015814e-52 | -8.615850e-47 |
| Msa0410960 | Msa1331730 | 0.818529 | 1.869581e-52 | -8.615850e-47 |
| Msa0410960 | Msa1336460 | -0.803797 | 2.936103e-49 | -8.615850e-47 |
| Msa0410960 | Msa1352060 | 0.814953 | 1.184741e-51 | -8.615850e-47 |
| Msa0410960 | Msa1357380 | 0.834709 | 2.562636e-56 | -8.615850e-47 |
| Msa0410960 | Msa1357720 | 0.821702 | 3.508315e-53 | -8.615850e-47 |
| Msa0410960 | Msa1365120 | 0.815876 | 7.384896e-52 | -8.615850e-47 |
| Msa0410960 | Msa1366700 | 0.823700 | 1.202518e-53 | -8.615850e-47 |
| Msa0410960 | Msa1384980 | 0.818289 | 2.118169e-52 | -8.615850e-47 |
| Msa0410960 | Msa1386020 | 0.841097 | 5.843353e-58 | -8.615850e-47 |
| Msa0410960 | Msa1394810 | 0.816078 | 6.657033e-52 | -8.615850e-47 |
| Msa0410960 | Msa1396820 | 0.804635 | 1.965478e-49 | -8.615850e-47 |
| Msa0410960 | Msa1408190 | 0.804806 | 1.809886e-49 | -8.615850e-47 |
| Msa0410960 | Msa1408900 | 0.832512 | 9.063635e-56 | -8.615850e-47 |
| Msa0410960 | Msa1431870 | 0.826463 | 2.675340e-54 | -8.615850e-47 |
| Msa0410960 | Msa1432250 | 0.817578 | 3.066984e-52 | -8.615850e-47 |
| Msa0410960 | Msa1433380 | 0.805877 | 1.079462e-49 | -8.615850e-47 |
| Msa0410960 | Msa1437650 | 0.812526 | 4.055231e-51 | -8.615850e-47 |
| Msa0410960 | Msa1443440 | 0.820188 | 7.826037e-53 | -8.615850e-47 |
| Msa0410960 | Msa1445250 | 0.838045 | 3.630313e-57 | -8.615850e-47 |
| Msa0410960 | Msa1448990 | 0.802878 | 4.551909e-49 | -8.615850e-47 |
| Msa0410960 | Msa1450420 | 0.815011 | 1.150181e-51 | -8.615850e-47 |
| Msa0410960 | Msa1450850 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa0410960 | Msa1457020 | 0.803434 | 3.492550e-49 | -8.615850e-47 |
| Msa0410960 | Msa1457070 | 0.833846 | 4.216808e-56 | -8.615850e-47 |
| Msa0410960 | Msa1459170 | 0.835934 | 1.256363e-56 | -8.615850e-47 |
| Msa0410960 | Msa1459630 | 0.800909 | 1.155395e-48 | -8.615850e-47 |
| Msa0241580 | Msa0410960 | 0.836175 | 1.091841e-56 | -8.615850e-47 |
| Msa0251140 | Msa0410960 | 0.805279 | 1.441396e-49 | -8.615850e-47 |
| Msa0252880 | Msa0410960 | -0.822204 | 2.684883e-53 | -8.615850e-47 |
| Msa0253240 | Msa0410960 | 0.804883 | 1.744390e-49 | -8.615850e-47 |
| Msa0254190 | Msa0410960 | 0.836400 | 9.569061e-57 | -8.615850e-47 |
| Msa0264020 | Msa0410960 | 0.818312 | 2.093536e-52 | -8.615850e-47 |
| Msa0264240 | Msa0410960 | 0.803037 | 4.220779e-49 | -8.615850e-47 |
| Msa0266380 | Msa0410960 | 0.860978 | 1.416809e-63 | -8.615850e-47 |
| Msa0272420 | Msa0410960 | 0.839166 | 1.864610e-57 | -8.615850e-47 |
| Msa0273230 | Msa0410960 | 0.814673 | 1.366640e-51 | -8.615850e-47 |
| Msa0279490 | Msa0410960 | 0.841333 | 5.063233e-58 | -8.615850e-47 |
| Msa0291090 | Msa0410960 | -0.809116 | 2.217867e-50 | -8.615850e-47 |
| Msa0305860 | Msa0410960 | 0.809599 | 1.747024e-50 | -8.615850e-47 |
| Msa0311330 | Msa0410960 | 0.810180 | 1.310306e-50 | -8.615850e-47 |
| Msa0312570 | Msa0410960 | 0.812665 | 3.781530e-51 | -8.615850e-47 |
| Msa0315010 | Msa0410960 | 0.867857 | 1.004779e-65 | -8.615850e-47 |
| Msa0317300 | Msa0410960 | -0.822313 | 2.532143e-53 | -8.615850e-47 |
| Msa0327900 | Msa0410960 | 0.804324 | 2.281502e-49 | -8.615850e-47 |
| Msa0329560 | Msa0410960 | 0.832754 | 7.893175e-56 | -8.615850e-47 |
| Msa0329650 | Msa0410960 | -0.820821 | 5.602434e-53 | -8.615850e-47 |
| Msa0330770 | Msa0410960 | 0.802839 | 4.637717e-49 | -8.615850e-47 |
| Msa0339560 | Msa0410960 | 0.806981 | 6.315470e-50 | -8.615850e-47 |
| Msa0341770 | Msa0410960 | 0.800676 | 1.289081e-48 | -8.615850e-47 |
| Msa0341860 | Msa0410960 | 0.856628 | 2.828784e-62 | -8.615850e-47 |
| Msa0350380 | Msa0410960 | 0.833505 | 5.130503e-56 | -8.615850e-47 |
| Msa0359630 | Msa0410960 | 0.822093 | 2.848478e-53 | -8.615850e-47 |
| Msa0360980 | Msa0410960 | 0.821593 | 3.717704e-53 | -8.615850e-47 |
| Msa0361500 | Msa0410960 | 0.805853 | 1.092076e-49 | -8.615850e-47 |
| Msa0363440 | Msa0410960 | 0.932928 | 4.070944e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410960 | MtrunA17_Chr3g0102071 | 96.857 | 350 | 11 | 0 | 1 | 350 | 1 | 350 | 0.0 | 690 |
| Msa0410960 | MtrunA17_Chr2g0328511 | 58.306 | 307 | 114 | 5 | 45 | 349 | 42 | 336 | 9.16e-131 | 377 |
| Msa0410960 | MtrunA17_Chr4g0043491 | 24.478 | 335 | 225 | 11 | 33 | 348 | 24 | 349 | 5.25e-18 | 84.0 |
| Msa0410960 | MtrunA17_Chr5g0430841 | 22.397 | 317 | 199 | 10 | 55 | 348 | 25 | 317 | 1.05e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0410960 | AT1G55910.1 | 59.159 | 333 | 97 | 6 | 26 | 350 | 25 | 326 | 5.74e-130 | 375 |
| Msa0410960 | AT5G59520.1 | 51.955 | 358 | 153 | 6 | 2 | 349 | 5 | 353 | 1.19e-117 | 344 |
| Msa0410960 | AT1G31260.1 | 25.000 | 316 | 210 | 11 | 50 | 348 | 58 | 363 | 3.68e-16 | 79.3 |
| Msa0410960 | AT4G19690.2 | 23.626 | 364 | 233 | 10 | 5 | 348 | 8 | 346 | 1.42e-15 | 77.4 |
| Msa0410960 | AT4G19680.2 | 24.930 | 357 | 231 | 12 | 13 | 348 | 9 | 349 | 6.92e-15 | 75.1 |
| Msa0410960 | AT2G32270.1 | 25.496 | 353 | 227 | 12 | 8 | 348 | 10 | 338 | 6.21e-14 | 72.4 |
| Msa0410960 | AT2G04032.1 | 22.478 | 347 | 224 | 12 | 1 | 317 | 1 | 332 | 9.66e-12 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGCTGGTGGAGTGTTTC+TGG | 0.111476 | 3_2:-52972780 | Msa0410960:CDS |
| TTGTGTTATTTCTTCTCTTT+TGG | 0.222822 | 3_2:-52972636 | Msa0410960:CDS |
| CAGACGCATGGAAAGCTTTA+TGG | 0.223228 | 3_2:-52970746 | Msa0410960:CDS |
| AACGAAGCGTTCTTGATTCT+TGG | 0.265595 | 3_2:-52972809 | Msa0410960:CDS |
| TTATAGCTGTTGTTATGATA+TGG | 0.275907 | 3_2:-52970392 | Msa0410960:CDS |
| ATTCTTGGGACGCAGTTTGC+TGG | 0.334635 | 3_2:-52972794 | Msa0410960:CDS |
| TTCTTCGCCACTTTCATTGC+TGG | 0.338005 | 3_2:-52972857 | Msa0410960:CDS |
| CAATCGTTAAGTGCATGTTT+TGG | 0.338958 | 3_2:+52969920 | None:intergenic |
| AAACTTGTATCCTGCATCTA+TGG | 0.340469 | 3_2:+52970177 | None:intergenic |
| TTTCCAATGGAAAATGAGTA+TGG | 0.346400 | 3_2:+52970154 | None:intergenic |
| CTTGCAGTGTCGTTGGGAAT+AGG | 0.356247 | 3_2:-52970417 | Msa0410960:CDS |
| TAATTCTCAGTCACAATATC+AGG | 0.371536 | 3_2:-52971020 | Msa0410960:intron |
| GTATCCTGCATCTATGGAAC+AGG | 0.372103 | 3_2:+52970183 | None:intergenic |
| AGTGATGCAAATGAAACTTT+TGG | 0.375689 | 3_2:-52972734 | Msa0410960:CDS |
| TCACCGCGTGTTTGGTTTCG+TGG | 0.386804 | 3_2:-52970047 | Msa0410960:three_prime_UTR |
| TTCTCCTCCGTTTCTTCTCA+CGG | 0.389079 | 3_2:-52972989 | Msa0410960:CDS |
| ACGAAGCGTTCTTGATTCTT+GGG | 0.396400 | 3_2:-52972808 | Msa0410960:CDS |
| ATTCCAATGGCCACACCAAT+TGG | 0.398109 | 3_2:+52970603 | None:intergenic |
| TTTGCTGGTGGAGTGTTTCT+GGG | 0.402346 | 3_2:-52972779 | Msa0410960:CDS |
| TATAGCTGTTGTTATGATAT+GGG | 0.411672 | 3_2:-52970391 | Msa0410960:CDS |
| AAAGATATTCACCGCGTGTT+TGG | 0.417567 | 3_2:-52970055 | Msa0410960:three_prime_UTR |
| GAAGAAGAGGAGAAGGAGAA+GGG | 0.422071 | 3_2:+52973009 | None:intergenic |
| CATGATAGTAGAGGTCGATT+AGG | 0.426412 | 3_2:+52970660 | None:intergenic |
| CAAGCCAACATGAACGCAAA+AGG | 0.431464 | 3_2:+52972689 | None:intergenic |
| AAGTTTCTTGCAGTGTCGTT+GGG | 0.445877 | 3_2:-52970423 | Msa0410960:CDS |
| CGGAGGAGAAGAAGAGGAGA+AGG | 0.447645 | 3_2:+52973002 | None:intergenic |
| AGAAGAAGAGGAGAAGGAGA+AGG | 0.448899 | 3_2:+52973008 | None:intergenic |
| AAAATAGATAGTCGCGTTCA+CGG | 0.449725 | 3_2:+52969944 | None:intergenic |
| TTGTGTTAACAGAGTTCTGC+TGG | 0.452952 | 3_2:-52970903 | Msa0410960:intron |
| GCGTTCATGTTGGCTTGTGC+TGG | 0.456845 | 3_2:-52972683 | Msa0410960:CDS |
| TTCGCAATCTCTAGTCCAAT+TGG | 0.460160 | 3_2:-52970618 | Msa0410960:CDS |
| TTTCACCTTACGTGCTAAGA+TGG | 0.462655 | 3_2:-52972832 | Msa0410960:CDS |
| CACAGGGTCATGTGGCCGAT+TGG | 0.483842 | 3_2:-52970563 | Msa0410960:CDS |
| GAAGTTTCTTGCAGTGTCGT+TGG | 0.484647 | 3_2:-52970424 | Msa0410960:CDS |
| AGTCCAATTGGTGTGGCCAT+TGG | 0.487047 | 3_2:-52970606 | Msa0410960:CDS |
| TCACATGATACTTATATGAC+TGG | 0.488542 | 3_2:+52970107 | None:intergenic |
| AAGAAACGGAGGAGAAGAAG+AGG | 0.494756 | 3_2:+52972996 | None:intergenic |
| TTCTGTGTCTGCGTCGGCGT+CGG | 0.499336 | 3_2:+52972943 | None:intergenic |
| CTTGCACCTAGTAGTTCAAT+CGG | 0.503612 | 3_2:-52970864 | Msa0410960:CDS |
| TCAGCGGCACCACCATGATT+CGG | 0.506334 | 3_2:+52972608 | None:intergenic |
| CCATGGGCATTGCTCTCCTT+AGG | 0.506992 | 3_2:-52970689 | Msa0410960:CDS |
| GATTTGTAAGGAGCGTGTTA+CGG | 0.508282 | 3_2:+52973104 | None:intergenic |
| CTTGGGACGCAGTTTGCTGG+TGG | 0.516428 | 3_2:-52972791 | Msa0410960:CDS |
| GAAAACAGAATGAGCACAAA+GGG | 0.517694 | 3_2:+52970803 | None:intergenic |
| GGGCATTGCTCTCCTTAGGA+TGG | 0.519832 | 3_2:-52970685 | Msa0410960:CDS |
| GTGGCCACCGTGAGAAGAAA+CGG | 0.523271 | 3_2:+52972982 | None:intergenic |
| GGTGGTGCCGCTGACGTTGA+AGG | 0.526651 | 3_2:-52972599 | Msa0410960:CDS |
| TCATAATTTCAAGTTTCCAA+TGG | 0.527527 | 3_2:+52970141 | None:intergenic |
| AGGTGCAAGATCAGTGTCAT+TGG | 0.531839 | 3_2:+52970878 | None:intergenic |
| GAGAAGGGAGAAGAAGAAGA+AGG | 0.538827 | 3_2:+52973024 | None:intergenic |
| CCTTATAAAACAAATCCACT+TGG | 0.542808 | 3_2:+52970272 | None:intergenic |
| CAAACATTCAAAGGCCGACT+CGG | 0.545714 | 3_2:-52970454 | Msa0410960:CDS |
| GAGAGCAATGCCCATGGCGA+TGG | 0.547861 | 3_2:+52970695 | None:intergenic |
| AGTCCCTGTTCCATAGATGC+AGG | 0.554824 | 3_2:-52970187 | Msa0410960:three_prime_UTR |
| GTATCTCCGATTGAACTACT+AGG | 0.558840 | 3_2:+52970858 | None:intergenic |
| GCCGCTGACGTTGAAGGTCA+AGG | 0.564092 | 3_2:-52972593 | Msa0410960:intron |
| AAGCCAACATGAACGCAAAA+GGG | 0.565393 | 3_2:+52972690 | None:intergenic |
| TCGTTCCATCTTAGCACGTA+AGG | 0.569757 | 3_2:+52972827 | None:intergenic |
| TTGCAGGGGCAGACAAAGGA+AGG | 0.574896 | 3_2:-52971054 | Msa0410960:intron |
| TGTATTAGATTCCACAACAC+AGG | 0.578420 | 3_2:-52970580 | Msa0410960:CDS |
| ATATCTATGGGTCTAGCTTG+TGG | 0.583623 | 3_2:-52970531 | Msa0410960:CDS |
| AGATATAGCGAAAATCCAAT+CGG | 0.583976 | 3_2:+52970548 | None:intergenic |
| GTCGATTAGGAACCATCCTA+AGG | 0.588650 | 3_2:+52970673 | None:intergenic |
| CGAAAACAGAATGAGCACAA+AGG | 0.590220 | 3_2:+52970802 | None:intergenic |
| TGAAACACCAGCAATGAAAG+TGG | 0.591004 | 3_2:+52972850 | None:intergenic |
| TGTAAGGAGCGTGTTACGGT+AGG | 0.592503 | 3_2:+52973108 | None:intergenic |
| AATATTCGCAGCCATCGCCA+TGG | 0.593276 | 3_2:-52970706 | Msa0410960:CDS |
| GACTTGCCAAAATTGAAATG+AGG | 0.596058 | 3_2:+52970206 | None:intergenic |
| TCGGCCTTTGAATGTTTGTG+AGG | 0.596171 | 3_2:+52970459 | None:intergenic |
| TGTGCCTCACAAACATTCAA+AGG | 0.597773 | 3_2:-52970463 | Msa0410960:CDS |
| CAAATTGCAGGGGCAGACAA+AGG | 0.599181 | 3_2:-52971058 | Msa0410960:intron |
| GGAATCTAATACAATTCCAA+TGG | 0.601962 | 3_2:+52970590 | None:intergenic |
| GGCCACATGACCCTGTGTTG+TGG | 0.602728 | 3_2:+52970569 | None:intergenic |
| CCGTGACAAAAGCAGACGCA+TGG | 0.606169 | 3_2:-52970758 | Msa0410960:CDS |
| ATATTCGCAGCCATCGCCAT+GGG | 0.612305 | 3_2:-52970705 | Msa0410960:CDS |
| ACCTTGACCTTCAACGTCAG+CGG | 0.615338 | 3_2:+52972592 | None:intergenic |
| AAACTTCATATAAGCCGAGT+CGG | 0.619401 | 3_2:+52970440 | None:intergenic |
| CACGGTGGCCACGACGACGA+TGG | 0.633814 | 3_2:-52972971 | Msa0410960:CDS |
| TTCCACAACACAGGGTCATG+TGG | 0.634030 | 3_2:-52970571 | Msa0410960:CDS |
| GGGAGCTTCTGTGTCTGCGT+CGG | 0.638341 | 3_2:+52972937 | None:intergenic |
| GCAGACAAAGGAAGGAGCAA+CGG | 0.643713 | 3_2:-52971046 | Msa0410960:CDS |
| GATTGCGAATGCAAAAGCGT+AGG | 0.649494 | 3_2:+52970632 | None:intergenic |
| CCTAAGGAGAGCAATGCCCA+TGG | 0.651165 | 3_2:+52970689 | None:intergenic |
| AATCTCTAGTCCAATTGGTG+TGG | 0.654473 | 3_2:-52970613 | Msa0410960:CDS |
| CGGCGTCGCCATCGTCGTCG+TGG | 0.655769 | 3_2:+52972963 | None:intergenic |
| TCCTCCGTTTCTTCTCACGG+TGG | 0.659968 | 3_2:-52972986 | Msa0410960:CDS |
| GTATTAGATTCCACAACACA+GGG | 0.667227 | 3_2:-52970579 | Msa0410960:CDS |
| TAGGCTGCACATGATAGTAG+AGG | 0.668698 | 3_2:+52970651 | None:intergenic |
| TTGGAGAAACCGAATCATGG+TGG | 0.696000 | 3_2:-52972617 | Msa0410960:CDS |
| GCCACCGTGAGAAGAAACGG+AGG | 0.699057 | 3_2:+52972985 | None:intergenic |
| TATCCTGCATCTATGGAACA+GGG | 0.700160 | 3_2:+52970184 | None:intergenic |
| TTGCCACGAAACCAAACACG+CGG | 0.748783 | 3_2:+52970044 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTATGTTTTTGATTT+TGG | - | chr3_2:52970461-52970480 | Msa0410960:CDS | 10.0% |
| !! | ACGAAAATTATATATTTATA+AGG | - | chr3_2:52970983-52971002 | Msa0410960:intron | 10.0% |
| !!! | AATAAATAAATTTTTCTGTA+TGG | + | chr3_2:52971325-52971344 | None:intergenic | 10.0% |
| !! | TTATGTTCTCAAATTATTAT+CGG | - | chr3_2:52970637-52970656 | Msa0410960:CDS | 15.0% |
| !!! | TAAATTTTTTCTTCGATTAT+AGG | - | chr3_2:52970925-52970944 | Msa0410960:intron | 15.0% |
| !!! | AAATTTTTTCTTCGATTATA+GGG | - | chr3_2:52970926-52970945 | Msa0410960:intron | 15.0% |
| !!! | AAATTGAAGAAAAATTTTAG+AGG | - | chr3_2:52970954-52970973 | Msa0410960:intron | 15.0% |
| !!! | ACCTTTTATATTTATCTATT+GGG | + | chr3_2:52971026-52971045 | None:intergenic | 15.0% |
| !!! | TTTTATTTGTTGGAAAAATA+TGG | - | chr3_2:52971197-52971216 | Msa0410960:intron | 15.0% |
| !! | TATTCCATTATGATTATTTA+TGG | - | chr3_2:52971356-52971375 | Msa0410960:intron | 15.0% |
| !! | TTGTAATAATGATGAAAATA+TGG | + | chr3_2:52971832-52971851 | None:intergenic | 15.0% |
| !!! | ATATTTTCATCATTATTACA+AGG | - | chr3_2:52971831-52971850 | Msa0410960:intron | 15.0% |
| !!! | TATCTTTCTTCATATTTTTA+AGG | + | chr3_2:52972930-52972949 | None:intergenic | 15.0% |
| !! | AGAACAAAAATAGATTTGTA+AGG | + | chr3_2:52969909-52969928 | None:intergenic | 20.0% |
| !!! | AAACAGTTTTAGAGATTATT+TGG | + | chr3_2:52970862-52970881 | None:intergenic | 20.0% |
| !! | AATCGAAGAAAAAATTTAGA+GGG | + | chr3_2:52970923-52970942 | None:intergenic | 20.0% |
| !! | TAATCGAAGAAAAAATTTAG+AGG | + | chr3_2:52970924-52970943 | None:intergenic | 20.0% |
| !!! | TATTGGGTTAAATATGTTTT+TGG | + | chr3_2:52971010-52971029 | None:intergenic | 20.0% |
| !! | ACCCAATAGATAAATATAAA+AGG | - | chr3_2:52971022-52971041 | Msa0410960:CDS | 20.0% |
| !!! | GACCTTTTATATTTATCTAT+TGG | + | chr3_2:52971027-52971046 | None:intergenic | 20.0% |
| !!! | TAAACTTTAGTTGTTTTTGT+TGG | - | chr3_2:52971095-52971114 | Msa0410960:intron | 20.0% |
| !!! | GAAAAATATGGTTACAATTT+TGG | - | chr3_2:52971209-52971228 | Msa0410960:intron | 20.0% |
| !!! | TACAATAGTCTTAACTATAA+AGG | - | chr3_2:52971289-52971308 | Msa0410960:intron | 20.0% |
| !! | CAGAAAAATTTATTTATTGC+TGG | - | chr3_2:52971327-52971346 | Msa0410960:intron | 20.0% |
| !! | ATCACCATAAATAATCATAA+TGG | + | chr3_2:52971363-52971382 | None:intergenic | 20.0% |
| !! | TTCATGTCTTTATGAATATT+TGG | - | chr3_2:52971654-52971673 | Msa0410960:intron | 20.0% |
| !! | AAATTCAATTCTGATATTTG+CGG | - | chr3_2:52971684-52971703 | Msa0410960:intron | 20.0% |
| !! | TTTCTGTTAAAAATTCGATT+TGG | + | chr3_2:52971793-52971812 | None:intergenic | 20.0% |
| !! | TAATAATGATGAAAATATGG+TGG | + | chr3_2:52971829-52971848 | None:intergenic | 20.0% |
| !!! | TTGTGTTATTTCTTCTCTTT+TGG | - | chr3_2:52970362-52970381 | Msa0410960:three_prime_UTR | 25.0% |
| !!! | TTTTTGATTTTGGTCTTGTT+TGG | - | chr3_2:52970471-52970490 | Msa0410960:CDS | 25.0% |
| !!! | TGATTTTAGTATACACCTTT+AGG | - | chr3_2:52970503-52970522 | Msa0410960:CDS | 25.0% |
| ! | GATTATAATCATATGTGTTG+CGG | + | chr3_2:52970604-52970623 | None:intergenic | 25.0% |
| !!! | TAAAAGGTCCTTTTTGTTTT+AGG | - | chr3_2:52971038-52971057 | Msa0410960:CDS | 25.0% |
| !!! | AAAAGGTCCTTTTTGTTTTA+GGG | - | chr3_2:52971039-52971058 | Msa0410960:CDS | 25.0% |
| ! | ACTTTATCCCTAAAACAAAA+AGG | + | chr3_2:52971049-52971068 | None:intergenic | 25.0% |
| !!! | TTTTAGGGATAAAGTGATTA+TGG | - | chr3_2:52971054-52971073 | Msa0410960:intron | 25.0% |
| !!! | ACTGTGTTGTTTTTATTTGT+TGG | - | chr3_2:52971187-52971206 | Msa0410960:intron | 25.0% |
| !! | AAATATGGTTACAATTTTGG+TGG | - | chr3_2:52971212-52971231 | Msa0410960:intron | 25.0% |
| !! | ATAGTCTTAACTATAAAGGT+TGG | - | chr3_2:52971293-52971312 | Msa0410960:intron | 25.0% |
| ! | TCAACCAAAAAAAAGATAAG+TGG | - | chr3_2:52971423-52971442 | Msa0410960:intron | 25.0% |
| !!! | TCAACCACTTATCTTTTTTT+TGG | + | chr3_2:52971430-52971449 | None:intergenic | 25.0% |
| ! | ATTATATTCTTCCAACTGTA+AGG | + | chr3_2:52971512-52971531 | None:intergenic | 25.0% |
| ! | CTCTATAGTTGGATAAAAAT+CGG | - | chr3_2:52971540-52971559 | Msa0410960:intron | 25.0% |
| !!! | ACAAAGCTACTTTCTTTTTT+TGG | - | chr3_2:52971915-52971934 | Msa0410960:intron | 25.0% |
| ! | AGTTAAATTAGTGATGACAA+GGG | + | chr3_2:52972062-52972081 | None:intergenic | 25.0% |
| !! | AATAAACCATCTTTTTGCTA+AGG | - | chr3_2:52972508-52972527 | Msa0410960:intron | 25.0% |
| !! | ATAAACCATCTTTTTGCTAA+GGG | - | chr3_2:52972509-52972528 | Msa0410960:intron | 25.0% |
| ! | TTATAGCTGTTGTTATGATA+TGG | - | chr3_2:52972606-52972625 | Msa0410960:CDS | 25.0% |
| ! | TATAGCTGTTGTTATGATAT+GGG | - | chr3_2:52972607-52972626 | Msa0410960:CDS | 25.0% |
| !! | ATTTTGCCTCATTTCAATTT+TGG | - | chr3_2:52972786-52972805 | Msa0410960:CDS | 25.0% |
| !!! | TCATAATTTCAAGTTTCCAA+TGG | + | chr3_2:52972860-52972879 | None:intergenic | 25.0% |
| ! | TCAGGATTAAGGATTTTGAA+CGG | + | chr3_2:52970095-52970114 | None:intergenic | 30.0% |
| ! | GTATACTTTTGTCAGGATTA+AGG | + | chr3_2:52970106-52970125 | None:intergenic | 30.0% |
| ! | TTAAGCAGTATACTTTTGTC+AGG | + | chr3_2:52970113-52970132 | None:intergenic | 30.0% |
| ! | AGTGATGCAAATGAAACTTT+TGG | - | chr3_2:52970264-52970283 | Msa0410960:three_prime_UTR | 30.0% |
| TTTGTTGGATATGTTCTTCT+AGG | - | chr3_2:52971110-52971129 | Msa0410960:intron | 30.0% | |
| TTGTTGGATATGTTCTTCTA+GGG | - | chr3_2:52971111-52971130 | Msa0410960:intron | 30.0% | |
| AATATTCGCATCTCTATAGT+TGG | - | chr3_2:52971529-52971548 | Msa0410960:intron | 30.0% | |
| !!! | TTTTTTTGGTGCAAATTGCA+GGG | - | chr3_2:52971929-52971948 | Msa0410960:intron | 30.0% |
| TAATTCTCAGTCACAATATC+AGG | - | chr3_2:52971978-52971997 | Msa0410960:intron | 30.0% | |
| CAGTTAAATTAGTGATGACA+AGG | + | chr3_2:52972063-52972082 | None:intergenic | 30.0% | |
| GGAATCTAATACAATTCCAA+TGG | + | chr3_2:52972411-52972430 | None:intergenic | 30.0% | |
| AGATATAGCGAAAATCCAAT+CGG | + | chr3_2:52972453-52972472 | None:intergenic | 30.0% | |
| ! | TTGGATTTTCGCTATATCTA+TGG | - | chr3_2:52972454-52972473 | Msa0410960:intron | 30.0% |
| ! | TGGATTTTCGCTATATCTAT+GGG | - | chr3_2:52972455-52972474 | Msa0410960:intron | 30.0% |
| CCTTATAAAACAAATCCACT+TGG | + | chr3_2:52972729-52972748 | None:intergenic | 30.0% | |
| !!! | CCAAGTGGATTTGTTTTATA+AGG | - | chr3_2:52972726-52972745 | Msa0410960:CDS | 30.0% |
| ! | TTTCCATACTCATTTTCCAT+TGG | - | chr3_2:52972841-52972860 | Msa0410960:CDS | 30.0% |
| TTTCCAATGGAAAATGAGTA+TGG | + | chr3_2:52972847-52972866 | None:intergenic | 30.0% | |
| TCACATGATACTTATATGAC+TGG | + | chr3_2:52972894-52972913 | None:intergenic | 30.0% | |
| !!! | TTTTTAGCTTCTGAAAACCA+CGG | + | chr3_2:52973013-52973032 | None:intergenic | 30.0% |
| CATAAGCGCTTATATCCTAA+AGG | + | chr3_2:52970521-52970540 | None:intergenic | 35.0% | |
| CATAATATGTATCCAACACC+AGG | + | chr3_2:52970574-52970593 | None:intergenic | 35.0% | |
| !! | TGGTTACAATTTTGGTGGTT+TGG | - | chr3_2:52971217-52971236 | Msa0410960:intron | 35.0% |
| TTGTGAGCTAGAAGGATAAA+TGG | - | chr3_2:52971391-52971410 | Msa0410960:intron | 35.0% | |
| ! | ACAAGACTTTGAAAAGTCCA+AGG | + | chr3_2:52971459-52971478 | None:intergenic | 35.0% |
| GTGCTGTACAAAGATATTTG+TGG | - | chr3_2:52971477-52971496 | Msa0410960:intron | 35.0% | |
| GTTAGACAAGGTGAATCTTA+AGG | + | chr3_2:52971895-52971914 | None:intergenic | 35.0% | |
| !! | AAGTAGCTTTGTGTTAGACA+AGG | + | chr3_2:52971907-52971926 | None:intergenic | 35.0% |
| !!! | CTTTTTTTGGTGCAAATTGC+AGG | - | chr3_2:52971928-52971947 | Msa0410960:intron | 35.0% |
| !!! | TTTTTTGGTGCAAATTGCAG+GGG | - | chr3_2:52971930-52971949 | Msa0410960:intron | 35.0% |
| GAAAACAGAATGAGCACAAA+GGG | + | chr3_2:52972198-52972217 | None:intergenic | 35.0% | |
| TGTATTAGATTCCACAACAC+AGG | - | chr3_2:52972418-52972437 | Msa0410960:intron | 35.0% | |
| GTATTAGATTCCACAACACA+GGG | - | chr3_2:52972419-52972438 | Msa0410960:intron | 35.0% | |
| CATAACCCTTAGCAAAAAGA+TGG | + | chr3_2:52972517-52972536 | None:intergenic | 35.0% | |
| AAACTTCATATAAGCCGAGT+CGG | + | chr3_2:52972561-52972580 | None:intergenic | 35.0% | |
| !!! | TCTTGCTTCTGAAGCATTTT+AGG | + | chr3_2:52972636-52972655 | None:intergenic | 35.0% |
| !!! | ACGTTTTTAAGTTAGCCAAG+TGG | - | chr3_2:52972711-52972730 | Msa0410960:CDS | 35.0% |
| GACTTGCCAAAATTGAAATG+AGG | + | chr3_2:52972795-52972814 | None:intergenic | 35.0% | |
| AAACTTGTATCCTGCATCTA+TGG | + | chr3_2:52972824-52972843 | None:intergenic | 35.0% | |
| TCTGAAAACCACGGAAAAAT+GGG | + | chr3_2:52973004-52973023 | None:intergenic | 35.0% | |
| ! | TTCTGAAAACCACGGAAAAA+TGG | + | chr3_2:52973005-52973024 | None:intergenic | 35.0% |
| AAAATAGATAGTCGCGTTCA+CGG | + | chr3_2:52973057-52973076 | None:intergenic | 35.0% | |
| ! | CAATCGTTAAGTGCATGTTT+TGG | + | chr3_2:52973081-52973100 | None:intergenic | 35.0% |
| ! | GATTTGTAAGGAGCGTGTTA+CGG | + | chr3_2:52969897-52969916 | None:intergenic | 40.0% |
| ! | GGATTAAGGATTTTGAACGG+AGG | + | chr3_2:52970092-52970111 | None:intergenic | 40.0% |
| TGAAACACCAGCAATGAAAG+TGG | + | chr3_2:52970151-52970170 | None:intergenic | 40.0% | |
| TTTCACCTTACGTGCTAAGA+TGG | - | chr3_2:52970166-52970185 | Msa0410960:three_prime_UTR | 40.0% | |
| ! | AACGAAGCGTTCTTGATTCT+TGG | - | chr3_2:52970189-52970208 | Msa0410960:three_prime_UTR | 40.0% |
| ! | ACGAAGCGTTCTTGATTCTT+GGG | - | chr3_2:52970190-52970209 | Msa0410960:three_prime_UTR | 40.0% |
| AAGCCAACATGAACGCAAAA+GGG | + | chr3_2:52970311-52970330 | None:intergenic | 40.0% | |
| !! | CTTTTGGAGAAACCGAATCA+TGG | - | chr3_2:52970378-52970397 | Msa0410960:exon | 40.0% |
| AATCATATGTGTTGCGGTGT+GGG | + | chr3_2:52970598-52970617 | None:intergenic | 40.0% | |
| TAATCATATGTGTTGCGGTG+TGG | + | chr3_2:52970599-52970618 | None:intergenic | 40.0% | |
| !! | TGGTGGTTTGGTACTTGATT+CGG | - | chr3_2:52971229-52971248 | Msa0410960:intron | 40.0% |
| ! | ATAGTGACTTGTGAGCTAGA+AGG | - | chr3_2:52971383-52971402 | Msa0410960:intron | 40.0% |
| GCTAGAAGGATAAATGGTTG+AGG | - | chr3_2:52971397-52971416 | Msa0410960:intron | 40.0% | |
| !! | TAAGTGGTTGACTTGATCCT+TGG | - | chr3_2:52971439-52971458 | Msa0410960:intron | 40.0% |
| CTTCCAACTGTAAGGAATCT+AGG | + | chr3_2:52971504-52971523 | None:intergenic | 40.0% | |
| GCTGATAGATGAAGATCAGA+TGG | + | chr3_2:52971622-52971641 | None:intergenic | 40.0% | |
| TTGTGTTAACAGAGTTCTGC+TGG | - | chr3_2:52972095-52972114 | Msa0410960:intron | 40.0% | |
| CTTGCACCTAGTAGTTCAAT+CGG | - | chr3_2:52972134-52972153 | Msa0410960:intron | 40.0% | |
| GTATCTCCGATTGAACTACT+AGG | + | chr3_2:52972143-52972162 | None:intergenic | 40.0% | |
| CGAAAACAGAATGAGCACAA+AGG | + | chr3_2:52972199-52972218 | None:intergenic | 40.0% | |
| ! | TTGTGCTCATTCTGTTTTCG+AGG | - | chr3_2:52972199-52972218 | Msa0410960:intron | 40.0% |
| ! | TGTGCTCATTCTGTTTTCGA+GGG | - | chr3_2:52972200-52972219 | Msa0410960:intron | 40.0% |
| !! | GTTTTCGAGGGTTTAGCAAT+TGG | - | chr3_2:52972212-52972231 | Msa0410960:intron | 40.0% |
| CATGATAGTAGAGGTCGATT+AGG | + | chr3_2:52972341-52972360 | None:intergenic | 40.0% | |
| TTCGCAATCTCTAGTCCAAT+TGG | - | chr3_2:52972380-52972399 | Msa0410960:intron | 40.0% | |
| AATCTCTAGTCCAATTGGTG+TGG | - | chr3_2:52972385-52972404 | Msa0410960:intron | 40.0% | |
| ! | ATATCTATGGGTCTAGCTTG+TGG | - | chr3_2:52972467-52972486 | Msa0410960:intron | 40.0% |
| TGTGCCTCACAAACATTCAA+AGG | - | chr3_2:52972535-52972554 | Msa0410960:intron | 40.0% | |
| ! | AAGTTTCTTGCAGTGTCGTT+GGG | - | chr3_2:52972575-52972594 | Msa0410960:intron | 40.0% |
| TATCCTGCATCTATGGAACA+GGG | + | chr3_2:52972817-52972836 | None:intergenic | 40.0% | |
| AAAGATATTCACCGCGTGTT+TGG | - | chr3_2:52972943-52972962 | Msa0410960:CDS | 40.0% | |
| GAGAAGGGAGAAGAAGAAGA+AGG | + | chr3_2:52969977-52969996 | None:intergenic | 45.0% | |
| GAAGAAGAGGAGAAGGAGAA+GGG | + | chr3_2:52969992-52970011 | None:intergenic | 45.0% | |
| AGAAGAAGAGGAGAAGGAGA+AGG | + | chr3_2:52969993-52970012 | None:intergenic | 45.0% | |
| AAGAAACGGAGGAGAAGAAG+AGG | + | chr3_2:52970005-52970024 | None:intergenic | 45.0% | |
| TTCTCCTCCGTTTCTTCTCA+CGG | - | chr3_2:52970009-52970028 | Msa0410960:three_prime_UTR | 45.0% | |
| ! | GATTTTGAACGGAGGTTGTG+GGG | + | chr3_2:52970084-52970103 | None:intergenic | 45.0% |
| ! | GGATTTTGAACGGAGGTTGT+GGG | + | chr3_2:52970085-52970104 | None:intergenic | 45.0% |
| ! | AGGATTTTGAACGGAGGTTG+TGG | + | chr3_2:52970086-52970105 | None:intergenic | 45.0% |
| ! | TTCTTCGCCACTTTCATTGC+TGG | - | chr3_2:52970141-52970160 | Msa0410960:three_prime_UTR | 45.0% |
| TCGTTCCATCTTAGCACGTA+AGG | + | chr3_2:52970174-52970193 | None:intergenic | 45.0% | |
| ! | TTTGCTGGTGGAGTGTTTCT+GGG | - | chr3_2:52970219-52970238 | Msa0410960:three_prime_UTR | 45.0% |
| ! | GTACCCTTTTGCGTTCATGT+TGG | - | chr3_2:52970305-52970324 | Msa0410960:three_prime_UTR | 45.0% |
| CAAGCCAACATGAACGCAAA+AGG | + | chr3_2:52970312-52970331 | None:intergenic | 45.0% | |
| TTGGAGAAACCGAATCATGG+TGG | - | chr3_2:52970381-52970400 | Msa0410960:exon | 45.0% | |
| ATAGACACAGAACACGACAC+AGG | + | chr3_2:52970673-52970692 | None:intergenic | 45.0% | |
| GGACCTAGATTCCTTACAGT+TGG | - | chr3_2:52971498-52971517 | Msa0410960:intron | 45.0% | |
| ! | GCGGTCTTGTCATGTGAATT+TGG | - | chr3_2:52971703-52971722 | Msa0410960:intron | 45.0% |
| CACGAACATGACAATGACTG+TGG | + | chr3_2:52971759-52971778 | None:intergenic | 45.0% | |
| AGGTGCAAGATCAGTGTCAT+TGG | + | chr3_2:52972123-52972142 | None:intergenic | 45.0% | |
| CAGACGCATGGAAAGCTTTA+TGG | - | chr3_2:52972252-52972271 | Msa0410960:intron | 45.0% | |
| GTCGATTAGGAACCATCCTA+AGG | + | chr3_2:52972328-52972347 | None:intergenic | 45.0% | |
| TAGGCTGCACATGATAGTAG+AGG | + | chr3_2:52972350-52972369 | None:intergenic | 45.0% | |
| ! | GATTGCGAATGCAAAAGCGT+AGG | + | chr3_2:52972369-52972388 | None:intergenic | 45.0% |
| ATTCCAATGGCCACACCAAT+TGG | + | chr3_2:52972398-52972417 | None:intergenic | 45.0% | |
| TCGGCCTTTGAATGTTTGTG+AGG | + | chr3_2:52972542-52972561 | None:intergenic | 45.0% | |
| CAAACATTCAAAGGCCGACT+CGG | - | chr3_2:52972544-52972563 | Msa0410960:intron | 45.0% | |
| GAAGTTTCTTGCAGTGTCGT+TGG | - | chr3_2:52972574-52972593 | Msa0410960:intron | 45.0% | |
| GTATCCTGCATCTATGGAAC+AGG | + | chr3_2:52972818-52972837 | None:intergenic | 45.0% | |
| ACCACGGAAAAATGGGACTT+GGG | + | chr3_2:52972997-52973016 | None:intergenic | 45.0% | |
| AACCACGGAAAAATGGGACT+TGG | + | chr3_2:52972998-52973017 | None:intergenic | 45.0% | |
| ATTCTTGGGACGCAGTTTGC+TGG | - | chr3_2:52970204-52970223 | Msa0410960:three_prime_UTR | 50.0% | |
| ! | GTTTGCTGGTGGAGTGTTTC+TGG | - | chr3_2:52970218-52970237 | Msa0410960:three_prime_UTR | 50.0% |
| ACCTTGACCTTCAACGTCAG+CGG | + | chr3_2:52970409-52970428 | None:intergenic | 50.0% | |
| ATGTATCCAACACCAGGACG+AGG | + | chr3_2:52970568-52970587 | None:intergenic | 50.0% | |
| CAAATTGCAGGGGCAGACAA+AGG | - | chr3_2:52971940-52971959 | Msa0410960:intron | 50.0% | |
| GCAGACAAAGGAAGGAGCAA+CGG | - | chr3_2:52971952-52971971 | Msa0410960:intron | 50.0% | |
| !! | CCATGCGTCTGCTTTTGTCA+CGG | + | chr3_2:52972243-52972262 | None:intergenic | 50.0% |
| AATATTCGCAGCCATCGCCA+TGG | - | chr3_2:52972292-52972311 | Msa0410960:intron | 50.0% | |
| ATATTCGCAGCCATCGCCAT+GGG | - | chr3_2:52972293-52972312 | Msa0410960:intron | 50.0% | |
| AGTCCAATTGGTGTGGCCAT+TGG | - | chr3_2:52972392-52972411 | Msa0410960:intron | 50.0% | |
| TTCCACAACACAGGGTCATG+TGG | - | chr3_2:52972427-52972446 | Msa0410960:intron | 50.0% | |
| ! | CTTGCAGTGTCGTTGGGAAT+AGG | - | chr3_2:52972581-52972600 | Msa0410960:intron | 50.0% |
| AGTCCCTGTTCCATAGATGC+AGG | - | chr3_2:52972811-52972830 | Msa0410960:CDS | 50.0% | |
| TTGCCACGAAACCAAACACG+CGG | + | chr3_2:52972957-52972976 | None:intergenic | 50.0% | |
| !! | TCCCAAGTCCCATTTTTCCG+TGG | - | chr3_2:52972993-52973012 | Msa0410960:CDS | 50.0% |
| CGGAGGAGAAGAAGAGGAGA+AGG | + | chr3_2:52969999-52970018 | None:intergenic | 55.0% | |
| TCCTCCGTTTCTTCTCACGG+TGG | - | chr3_2:52970012-52970031 | Msa0410960:three_prime_UTR | 55.0% | |
| GTGGCCACCGTGAGAAGAAA+CGG | + | chr3_2:52970019-52970038 | None:intergenic | 55.0% | |
| !! | GCGTTCATGTTGGCTTGTGC+TGG | - | chr3_2:52970315-52970334 | Msa0410960:three_prime_UTR | 55.0% |
| TCAGCGGCACCACCATGATT+CGG | + | chr3_2:52970393-52970412 | None:intergenic | 55.0% | |
| AGCAGAGATACTCCTCGTCC+TGG | - | chr3_2:52970553-52970572 | Msa0410960:CDS | 55.0% | |
| GATACTCCTCGTCCTGGTGT+TGG | - | chr3_2:52970559-52970578 | Msa0410960:CDS | 55.0% | |
| TTGCAGGGGCAGACAAAGGA+AGG | - | chr3_2:52971944-52971963 | Msa0410960:intron | 55.0% | |
| CCGTGACAAAAGCAGACGCA+TGG | - | chr3_2:52972240-52972259 | Msa0410960:intron | 55.0% | |
| CCTAAGGAGAGCAATGCCCA+TGG | + | chr3_2:52972312-52972331 | None:intergenic | 55.0% | |
| ! | CCATGGGCATTGCTCTCCTT+AGG | - | chr3_2:52972309-52972328 | Msa0410960:intron | 55.0% |
| ! | GGGCATTGCTCTCCTTAGGA+TGG | - | chr3_2:52972313-52972332 | Msa0410960:intron | 55.0% |
| ! | TCACCGCGTGTTTGGTTTCG+TGG | - | chr3_2:52972951-52972970 | Msa0410960:CDS | 55.0% |
| GCCACCGTGAGAAGAAACGG+AGG | + | chr3_2:52970016-52970035 | None:intergenic | 60.0% | |
| ! | TTCTGTGTCTGCGTCGGCGT+CGG | + | chr3_2:52970058-52970077 | None:intergenic | 60.0% |
| GGGAGCTTCTGTGTCTGCGT+CGG | + | chr3_2:52970064-52970083 | None:intergenic | 60.0% | |
| !! | CTTGGGACGCAGTTTGCTGG+TGG | - | chr3_2:52970207-52970226 | Msa0410960:three_prime_UTR | 60.0% |
| GCCGCTGACGTTGAAGGTCA+AGG | - | chr3_2:52970405-52970424 | Msa0410960:CDS | 60.0% | |
| GAGAGCAATGCCCATGGCGA+TGG | + | chr3_2:52972306-52972325 | None:intergenic | 60.0% | |
| GGCCACATGACCCTGTGTTG+TGG | + | chr3_2:52972432-52972451 | None:intergenic | 60.0% | |
| CACAGGGTCATGTGGCCGAT+TGG | - | chr3_2:52972435-52972454 | Msa0410960:intron | 60.0% | |
| !! | GGTGGTGCCGCTGACGTTGA+AGG | - | chr3_2:52970399-52970418 | Msa0410960:CDS | 65.0% |
| CACGGTGGCCACGACGACGA+TGG | - | chr3_2:52970027-52970046 | Msa0410960:three_prime_UTR | 70.0% | |
| CGGCGTCGCCATCGTCGTCG+TGG | + | chr3_2:52970038-52970057 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 52969892 | 52973128 | 52969892 | ID=Msa0410960;Name=Msa0410960 |
| chr3_2 | mRNA | 52969892 | 52973128 | 52969892 | ID=Msa0410960-mRNA-1;Parent=Msa0410960;Name=Msa0410960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=63|1|1|1|1|1|3|491|350 |
| chr3_2 | exon | 52969892 | 52970913 | 52969892 | ID=Msa0410960-mRNA-1:exon:10524;Parent=Msa0410960-mRNA-1 |
| chr3_2 | exon | 52971021 | 52971070 | 52971021 | ID=Msa0410960-mRNA-1:exon:10523;Parent=Msa0410960-mRNA-1 |
| chr3_2 | exon | 52972594 | 52973128 | 52972594 | ID=Msa0410960-mRNA-1:exon:10522;Parent=Msa0410960-mRNA-1 |
| chr3_2 | five_prime_UTR | 52973066 | 52973128 | 52973066 | ID=Msa0410960-mRNA-1:five_prime_utr;Parent=Msa0410960-mRNA-1 |
| chr3_2 | CDS | 52972594 | 52973065 | 52972594 | ID=Msa0410960-mRNA-1:cds;Parent=Msa0410960-mRNA-1 |
| chr3_2 | CDS | 52971021 | 52971070 | 52971021 | ID=Msa0410960-mRNA-1:cds;Parent=Msa0410960-mRNA-1 |
| chr3_2 | CDS | 52970383 | 52970913 | 52970383 | ID=Msa0410960-mRNA-1:cds;Parent=Msa0410960-mRNA-1 |
| chr3_2 | three_prime_UTR | 52969892 | 52970382 | 52969892 | ID=Msa0410960-mRNA-1:three_prime_utr;Parent=Msa0410960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
