AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0372120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0372120 MtrunA17_Chr3g0120451 67.016 191 17 3 79 224 635 824 1.78e-71 235
Msa0372120 MtrunA17_Chr3g0120451 70.866 127 30 3 1 125 1 122 3.58e-42 153
Msa0372120 MtrunA17_Chr3g0097721 39.791 191 67 3 79 224 202 389 5.55e-36 133
Msa0372120 MtrunA17_Chr3g0097721 35.260 173 89 6 1 157 2 167 2.75e-16 78.2
Msa0372120 MtrunA17_Chr3g0097311 40.314 191 69 3 79 224 535 725 1.74e-35 134
Msa0372120 MtrunA17_Chr3g0097311 40.909 132 69 5 21 146 19 147 5.05e-14 71.6
Msa0372120 MtrunA17_Chr3g0097561 49.254 134 55 3 101 224 53 183 1.12e-34 124
Msa0372120 MtrunA17_Chr3g0097331 39.062 192 71 4 79 224 463 654 5.29e-34 130
Msa0372120 MtrunA17_Chr3g0097691 50.000 132 53 2 103 224 112 240 5.56e-34 124
Msa0372120 MtrunA17_Chr4g0003781 47.482 139 54 3 101 224 412 546 7.08e-34 129
Msa0372120 MtrunA17_Chr3g0095011 49.242 132 57 1 103 224 617 748 2.20e-33 128
Msa0372120 MtrunA17_Chr3g0095011 52.941 68 30 2 20 87 15 80 4.48e-13 68.9
Msa0372120 MtrunA17_Chr3g0097501 37.824 193 73 4 79 224 52 244 1.41e-32 120
Msa0372120 MtrunA17_Chr3g0097281 47.407 135 60 2 101 224 133 267 4.10e-32 120
Msa0372120 MtrunA17_Chr3g0097341 35.417 192 78 2 79 224 554 745 4.45e-32 124
Msa0372120 MtrunA17_Chr3g0097341 35.385 130 71 5 21 146 20 140 7.98e-11 62.4
Msa0372120 MtrunA17_Chr3g0097291 48.872 133 57 2 103 224 198 330 5.03e-32 121
Msa0372120 MtrunA17_Chr3g0097291 36.735 147 67 5 30 153 3 146 4.61e-18 82.8
Msa0372120 MtrunA17_Chr3g0097701 49.254 134 55 3 101 224 618 748 5.82e-32 124
Msa0372120 MtrunA17_Chr3g0097361 36.979 192 75 3 79 224 623 814 9.00e-32 124
Msa0372120 MtrunA17_Chr3g0097361 29.878 164 82 5 21 183 20 151 6.66e-11 62.4
Msa0372120 MtrunA17_Chr3g0097261 37.037 216 80 6 79 245 564 772 1.25e-31 123
Msa0372120 MtrunA17_Chr8g0345411 46.667 135 61 2 101 224 172 306 1.33e-31 119
Msa0372120 MtrunA17_Chr2g0317551 48.485 132 58 1 103 224 613 744 2.85e-31 122
Msa0372120 MtrunA17_Chr3g0093881 48.120 133 58 2 103 224 624 756 2.87e-31 122
Msa0372120 MtrunA17_Chr3g0093881 34.437 151 84 6 1 147 15 154 4.27e-12 66.2
Msa0372120 MtrunA17_Chr3g0104561 38.342 193 72 4 79 224 552 744 3.69e-31 122
Msa0372120 MtrunA17_Chr3g0104561 36.301 146 72 6 18 159 17 145 6.61e-13 68.6
Msa0372120 MtrunA17_Chr3g0097001 36.771 223 90 6 79 255 454 671 4.84e-31 121
Msa0372120 MtrunA17_Chr3g0097461 50.376 133 55 2 103 224 613 745 8.08e-31 120
Msa0372120 MtrunA17_Chr3g0097411 50.000 136 55 3 101 224 601 735 1.30e-30 120
Msa0372120 MtrunA17_Chr3g0097411 40.152 132 58 6 25 143 34 157 1.53e-13 70.5
Msa0372120 MtrunA17_Chr8g0354061 35.246 244 91 6 79 263 646 881 3.80e-30 119
Msa0372120 MtrunA17_Chr4g0023651 36.979 192 75 4 79 224 259 450 5.49e-30 117
Msa0372120 MtrunA17_Chr3g0097761 36.458 192 76 3 79 224 556 747 1.41e-29 117
Msa0372120 MtrunA17_Chr3g0097761 48.684 76 35 3 12 87 10 81 2.95e-13 69.7
Msa0372120 MtrunA17_Chr8g0354041 42.246 187 82 7 91 263 702 876 1.68e-29 117
Msa0372120 MtrunA17_Chr3g0097321 49.231 130 53 3 103 220 616 744 5.03e-28 112
Msa0372120 MtrunA17_Chr3g0097321 37.121 132 71 6 21 144 20 147 6.23e-11 62.4
Msa0372120 MtrunA17_Chr3g0096901 40.341 176 88 5 101 265 95 264 5.35e-28 108
Msa0372120 MtrunA17_Chr2g0284891 32.743 226 104 9 79 265 527 743 3.88e-27 110
Msa0372120 MtrunA17_Chr8g0354031 37.433 187 95 5 91 263 698 876 6.73e-27 109
Msa0372120 MtrunA17_Chr2g0284851 33.846 195 102 6 89 265 61 246 5.31e-26 102
Msa0372120 MtrunA17_Chr5g0420291 44.118 136 64 4 101 224 60 195 8.37e-26 101
Msa0372120 MtrunA17_Chr6g0469721 38.012 171 85 7 75 233 7 168 1.07e-24 97.8
Msa0372120 MtrunA17_Chr6g0455871 37.853 177 79 4 101 257 12 177 1.23e-24 97.8
Msa0372120 MtrunA17_Chr6g0455751 38.071 197 102 6 64 247 533 722 2.76e-24 102
Msa0372120 MtrunA17_Chr6g0455851 40.120 167 69 5 101 247 831 986 4.07e-24 101
Msa0372120 MtrunA17_Chr6g0455851 36.691 139 79 4 37 174 29 159 6.23e-14 71.6
Msa0372120 MtrunA17_Chr6g0465231 40.805 174 72 7 72 223 914 1078 1.99e-23 99.8
Msa0372120 MtrunA17_Chr6g0455801 37.056 197 99 6 67 247 723 910 2.64e-23 99.4
Msa0372120 MtrunA17_Chr6g0465181 34.921 189 103 5 51 223 922 1106 3.76e-23 99.0
Msa0372120 MtrunA17_Chr6g0465181 35.821 134 74 4 37 162 39 168 1.11e-15 77.0
Msa0372120 MtrunA17_Chr1g0202011 37.306 193 86 7 73 245 2 179 4.97e-23 93.6
Msa0372120 MtrunA17_Chr6g0455781 40.252 159 80 3 101 247 680 835 8.27e-23 97.8
Msa0372120 MtrunA17_Chr3g0097381 50.000 100 37 2 135 224 1 97 1.92e-22 90.5
Msa0372120 MtrunA17_Chr4g0007381 42.424 132 66 1 103 224 879 1010 3.25e-22 95.9
Msa0372120 MtrunA17_Chr2g0284871 37.838 148 73 4 103 232 799 945 3.96e-22 95.9
Msa0372120 MtrunA17_Chr2g0284871 32.099 162 94 5 10 162 17 171 2.49e-11 63.9
Msa0372120 MtrunA17_Chr6g0465131 38.286 175 93 4 72 233 919 1091 4.08e-22 95.9
Msa0372120 MtrunA17_Chr6g0465131 34.586 133 78 3 37 162 39 169 7.23e-13 68.6
Msa0372120 MtrunA17_Chr5g0429421 40.606 165 82 5 73 224 701 862 4.46e-22 95.5
Msa0372120 MtrunA17_Chr5g0429421 36.842 171 83 7 37 189 33 196 6.77e-19 86.3
Msa0372120 MtrunA17_Chr6g0455861 41.104 163 73 5 101 247 320 475 4.94e-22 95.1
Msa0372120 MtrunA17_Chr6g0455811 37.056 197 103 7 65 247 750 939 5.66e-22 95.5
Msa0372120 MtrunA17_Chr6g0455811 36.290 124 76 2 37 160 31 151 1.08e-14 73.9
Msa0372120 MtrunA17_Chr4g0022051 36.269 193 87 7 73 245 138 314 1.26e-21 92.4
Msa0372120 MtrunA17_Chr1g0161321 38.415 164 76 5 73 219 54 209 1.28e-21 89.7
Msa0372120 MtrunA17_Chr4g0007111 47.959 98 41 1 104 191 178 275 1.45e-21 92.8
Msa0372120 MtrunA17_Chr2g0284741 30.864 243 136 8 45 265 746 978 1.64e-21 94.0
Msa0372120 MtrunA17_Chr6g0455721 39.634 164 74 4 101 247 764 919 1.93e-21 93.6
Msa0372120 MtrunA17_Chr6g0455721 36.800 125 73 4 37 160 31 150 1.34e-13 70.5
Msa0372120 MtrunA17_Chr6g0465251 35.928 167 90 3 72 223 289 453 2.19e-21 93.2
Msa0372120 MtrunA17_Chr6g0465151 44.203 138 62 2 101 223 732 869 2.45e-21 93.6
Msa0372120 MtrunA17_Chr4g0007331 46.939 98 42 1 104 191 926 1023 2.46e-21 93.6
Msa0372120 MtrunA17_Chr4g0007291 47.959 98 41 1 104 191 575 672 3.37e-21 92.8
Msa0372120 MtrunA17_Chr3g0106171 41.401 157 75 5 103 247 820 971 3.77e-21 92.8
Msa0372120 MtrunA17_Chr3g0106171 31.053 190 97 6 8 167 7 192 7.92e-15 74.3
Msa0372120 MtrunA17_Chr2g0316441 38.037 163 76 4 104 255 741 889 3.89e-21 92.8
Msa0372120 MtrunA17_Chr1g0169661 37.824 193 86 8 72 245 140 317 4.40e-21 90.9
Msa0372120 MtrunA17_Chr4g0007501 43.262 141 58 3 104 228 194 328 5.91e-21 90.9
Msa0372120 MtrunA17_Chr4g0007141 46.939 98 42 1 104 191 230 327 6.59e-21 91.3
Msa0372120 MtrunA17_Chr5g0439451 37.931 174 86 5 103 261 932 1098 7.68e-21 92.0
Msa0372120 MtrunA17_Chr5g0439451 28.421 190 99 3 37 201 43 220 7.68e-11 62.4
Msa0372120 MtrunA17_Chr6g0464821 43.089 123 50 2 103 224 185 288 8.63e-21 90.1
Msa0372120 MtrunA17_Chr2g0304481 40.000 145 69 4 104 233 865 1006 1.05e-20 91.7
Msa0372120 MtrunA17_Chr2g0304481 32.934 167 92 6 11 162 8 169 6.20e-12 65.5
Msa0372120 MtrunA17_Chr6g0465211 40.351 171 77 7 72 223 891 1055 1.34e-20 91.3
Msa0372120 MtrunA17_Chr6g0465211 32.828 198 101 7 37 217 39 221 2.69e-16 78.6
Msa0372120 MtrunA17_Chr4g0007511 43.262 141 58 3 104 228 883 1017 1.80e-20 90.9
Msa0372120 MtrunA17_Chr4g0007451 43.262 141 58 3 104 228 883 1017 1.96e-20 90.9
Msa0372120 MtrunA17_Chr5g0419961 45.536 112 45 3 103 203 472 578 2.04e-20 90.5
Msa0372120 MtrunA17_Chr2g0284861 31.343 201 100 6 89 265 789 975 2.04e-20 90.9
Msa0372120 MtrunA17_Chr7g0219371 51.020 98 38 1 104 191 748 845 2.36e-20 90.5
Msa0372120 MtrunA17_Chr7g0219371 38.583 127 75 3 37 162 30 154 2.38e-14 72.8
Msa0372120 MtrunA17_Chr6g0464631 40.580 138 67 2 101 223 1029 1166 2.55e-20 90.5
Msa0372120 MtrunA17_Chr6g0464631 34.328 134 77 4 37 162 38 168 1.46e-11 64.7
Msa0372120 MtrunA17_Chr4g0007151 45.631 103 45 2 104 195 921 1023 3.48e-20 90.1
Msa0372120 MtrunA17_Chr4g0007151 31.646 158 94 5 10 163 6 153 9.25e-11 62.0
Msa0372120 MtrunA17_Chr6g0455671 40.000 160 77 5 101 247 746 899 3.67e-20 90.1
Msa0372120 MtrunA17_Chr6g0455671 35.878 131 75 4 37 166 31 153 5.61e-13 68.6
Msa0372120 MtrunA17_Chr8g0355911 51.087 92 35 1 103 184 199 290 3.80e-20 87.8
Msa0372120 MtrunA17_Chr2g0312401 36.066 183 89 6 73 236 171 344 4.02e-20 88.2
Msa0372120 MtrunA17_Chr4g0008241 37.500 152 84 3 73 213 708 859 4.28e-20 89.7
Msa0372120 MtrunA17_Chr4g0007431 45.217 115 47 3 104 208 875 983 4.71e-20 89.7
Msa0372120 MtrunA17_Chr4g0005021 47.959 98 41 1 104 191 863 960 5.21e-20 89.7
Msa0372120 MtrunA17_Chr4g0008201 49.438 89 35 1 114 192 6 94 6.25e-20 84.7
Msa0372120 MtrunA17_Chr4g0008211 36.810 163 80 4 103 255 851 1000 7.03e-20 89.4
Msa0372120 MtrunA17_Chr4g0008291 48.980 98 40 1 104 191 816 913 7.38e-20 89.0
Msa0372120 MtrunA17_Chr5g0446221 42.373 118 57 2 84 191 42 158 8.14e-20 84.7
Msa0372120 MtrunA17_Chr1g0190571 36.364 187 95 6 73 245 557 733 8.89e-20 89.0
Msa0372120 MtrunA17_Chr1g0190571 33.333 174 100 5 15 175 5 175 8.28e-16 77.0
Msa0372120 MtrunA17_Chr4g0007211 38.961 154 63 5 103 232 925 1071 9.21e-20 89.0
Msa0372120 MtrunA17_Chr5g0411301 34.286 210 114 7 50 245 296 495 1.13e-19 88.2
Msa0372120 MtrunA17_Chr5g0436581 44.545 110 51 1 101 200 163 272 1.49e-19 85.9
Msa0372120 MtrunA17_Chr8g0335921 45.455 110 44 2 110 209 2 105 1.54e-19 83.6
Msa0372120 MtrunA17_Chr4g0007201 45.631 103 45 2 104 195 922 1024 1.60e-19 88.2
Msa0372120 MtrunA17_Chr6g0463291 31.343 201 87 5 69 224 492 686 1.82e-19 87.8
Msa0372120 MtrunA17_Chr4g0007441 47.959 98 41 1 104 191 853 950 2.53e-19 87.4
Msa0372120 MtrunA17_Chr8g0354011 40.141 142 61 6 135 263 1 131 3.55e-19 81.6
Msa0372120 MtrunA17_Chr6g0455701 37.805 164 77 4 101 247 776 931 3.99e-19 87.0
Msa0372120 MtrunA17_Chr6g0455701 34.146 123 73 3 37 159 31 145 1.75e-11 64.3
Msa0372120 MtrunA17_Chr4g0008271 46.465 99 43 1 103 191 841 939 4.24e-19 87.0
Msa0372120 MtrunA17_Chr6g0465291 35.928 167 90 3 72 223 1001 1165 4.73e-19 86.7
Msa0372120 MtrunA17_Chr6g0465291 29.870 154 78 3 37 162 59 210 1.12e-11 65.1
Msa0372120 MtrunA17_Chr5g0420241 33.766 154 80 3 11 162 12 145 5.84e-19 82.0
Msa0372120 MtrunA17_Chr5g0439461 35.393 178 86 5 76 245 914 1070 9.08e-19 85.9
Msa0372120 MtrunA17_Chr5g0439461 26.066 211 123 2 14 201 14 214 1.57e-11 64.3
Msa0372120 MtrunA17_Chr4g0007101 44.898 98 44 1 104 191 926 1023 1.06e-18 85.9
Msa0372120 MtrunA17_Chr4g0007571 45.918 98 43 1 104 191 695 792 1.48e-18 85.1
Msa0372120 MtrunA17_Chr5g0446861 37.415 147 70 4 92 225 280 417 1.55e-18 84.7
Msa0372120 MtrunA17_Chr5g0426051 34.545 165 88 3 95 249 420 574 1.67e-18 85.1
Msa0372120 MtrunA17_Chr4g0007091 39.597 149 67 5 104 232 919 1064 1.72e-18 85.1
Msa0372120 MtrunA17_Chr4g0007411 47.475 99 42 1 104 192 413 511 2.07e-18 84.7
Msa0372120 MtrunA17_Chr3g0097531 53.425 73 24 1 135 197 1 73 4.32e-18 77.0
Msa0372120 MtrunA17_Chr8g0375511 32.203 177 97 3 103 269 627 790 8.46e-18 83.2
Msa0372120 MtrunA17_Chr4g0022071 39.695 131 56 3 73 188 225 347 1.12e-17 81.6
Msa0372120 MtrunA17_Chr6g0463301 38.760 129 66 2 73 191 905 1030 1.24e-17 82.4
Msa0372120 MtrunA17_Chr6g0463301 33.333 150 83 6 19 159 20 161 2.15e-11 63.9
Msa0372120 MtrunA17_Chr6g0463281 37.162 148 78 4 101 233 951 1098 1.86e-17 82.0
Msa0372120 MtrunA17_Chr6g0478761 37.589 141 72 2 99 229 168 302 2.00e-17 80.9
Msa0372120 MtrunA17_Chr5g0409041 25.735 272 150 7 11 253 11 259 2.02e-17 81.6
Msa0372120 MtrunA17_Chr2g0304331 39.310 145 73 4 104 233 911 1055 2.86e-17 81.6
Msa0372120 MtrunA17_Chr2g0304331 30.108 186 85 5 17 162 60 240 7.53e-11 62.4
Msa0372120 MtrunA17_Chr6g0463251 36.486 148 79 4 101 233 911 1058 3.01e-17 81.6
Msa0372120 MtrunA17_Chr3g0097551 37.209 129 75 4 28 154 28 152 4.17e-17 76.6
Msa0372120 MtrunA17_Chr5g0446871 34.756 164 92 4 85 234 844 1006 4.68e-17 80.9
Msa0372120 MtrunA17_Chr5g0446871 35.065 154 77 7 37 182 26 164 2.60e-11 63.9
Msa0372120 MtrunA17_Chr5g0420311 29.381 194 99 6 11 167 12 204 5.71e-17 78.6
Msa0372120 MtrunA17_Chr8g0380831 34.839 155 75 4 58 191 645 794 5.76e-17 80.5
Msa0372120 MtrunA17_Chr8g0380811 37.692 130 71 1 72 191 703 832 6.15e-17 80.5
Msa0372120 MtrunA17_Chr5g0439511 33.974 156 78 3 47 191 87 228 8.29e-17 78.6
Msa0372120 MtrunA17_Chr3g0097471 37.821 156 83 7 1 148 2 151 2.00e-16 75.5
Msa0372120 MtrunA17_Chr2g0304271 39.456 147 71 5 104 233 73 218 2.14e-16 76.6
Msa0372120 MtrunA17_Chr3g0097651 36.975 119 40 1 79 162 520 638 2.20e-16 78.6
Msa0372120 MtrunA17_Chr3g0097651 38.667 150 78 7 1 146 1 140 4.28e-11 62.8
Msa0372120 MtrunA17_Chr2g0293591 36.552 145 74 3 92 225 792 929 5.28e-16 77.8
Msa0372120 MtrunA17_Chr2g0284771 36.283 113 61 2 89 190 504 616 7.33e-16 77.0
Msa0372120 MtrunA17_Chr4g0006901 33.758 157 84 3 67 212 503 650 7.64e-16 77.0
Msa0372120 MtrunA17_Chr7g0222841 30.806 211 101 10 19 194 19 219 8.39e-16 74.3
Msa0372120 MtrunA17_Chr5g0426041 36.667 150 84 2 95 233 788 937 9.93e-16 77.0
Msa0372120 MtrunA17_Chr4g0022041 32.386 176 92 6 1 153 1 172 1.02e-15 76.6
Msa0372120 MtrunA17_Chr8g0353761 49.438 89 30 3 135 212 1 85 1.31e-15 70.5
Msa0372120 MtrunA17_Chr1g0165191 33.898 177 96 5 1 167 1 166 1.64e-15 76.3
Msa0372120 MtrunA17_Chr2g0317591 58.333 60 25 0 103 162 286 345 1.88e-15 75.5
Msa0372120 MtrunA17_Chr5g0440141 36.364 143 76 4 103 231 905 1046 2.05e-15 75.9
Msa0372120 MtrunA17_Chr4g0014151 41.121 107 53 1 95 191 894 1000 2.05e-15 75.9
Msa0372120 MtrunA17_Chr1g0190411 32.941 170 90 5 79 233 494 654 2.30e-15 75.9
Msa0372120 MtrunA17_Chr3g0097571 30.583 206 74 8 79 245 103 278 2.36e-15 74.7
Msa0372120 MtrunA17_Chr7g0215171 28.718 195 100 6 36 194 31 222 2.84e-15 73.2
Msa0372120 MtrunA17_Chr8g0345561 37.705 122 62 2 80 191 582 699 3.76e-15 75.1
Msa0372120 MtrunA17_Chr5g0439921 36.957 138 67 4 103 229 836 964 4.02e-15 75.1
Msa0372120 MtrunA17_Chr4g0006961 37.209 129 62 3 73 191 511 630 5.29e-15 74.7
Msa0372120 MtrunA17_Chr8g0360851 30.508 177 101 5 41 198 488 661 7.31e-15 74.3
Msa0372120 MtrunA17_Chr3g0087631 32.484 157 92 3 92 234 800 956 8.17e-15 74.3
Msa0372120 MtrunA17_Chr4g0006941 35.252 139 77 3 87 212 798 936 9.35e-15 73.9
Msa0372120 MtrunA17_Chr3g0087421 36.434 129 74 4 35 162 31 152 1.06e-14 73.9
Msa0372120 MtrunA17_Chr7g0241441 40.367 109 54 2 95 192 986 1094 1.10e-14 73.9
Msa0372120 MtrunA17_Chr3g0079661 41.509 106 52 1 104 199 712 817 1.23e-14 73.9
Msa0372120 MtrunA17_Chr1g0165971 37.037 162 86 6 1 159 1 149 1.23e-14 73.6
Msa0372120 MtrunA17_Chr4g0024381 39.796 98 49 1 103 190 55 152 1.34e-14 69.7
Msa0372120 MtrunA17_Chr1g0203251 44.444 99 44 2 104 191 975 1073 2.45e-14 72.8
Msa0372120 MtrunA17_Chr6g0465141 35.075 134 76 4 37 162 33 163 2.47e-14 70.9
Msa0372120 MtrunA17_Chr1g0197951 58.491 53 22 0 101 153 162 214 2.84e-14 70.1
Msa0372120 MtrunA17_Chr2g0298631 35.652 115 68 2 10 124 8 116 2.90e-14 68.9
Msa0372120 MtrunA17_Chr5g0446091 35.821 134 67 3 103 225 115 240 2.99e-14 71.2
Msa0372120 MtrunA17_Chr4g0006861 37.607 117 61 2 87 191 826 942 3.57e-14 72.4
Msa0372120 MtrunA17_Chr7g0222901 31.132 212 101 11 19 194 19 221 3.65e-14 69.7
Msa0372120 MtrunA17_Chr4g0004161 39.850 133 66 3 73 194 871 1000 4.02e-14 72.0
Msa0372120 MtrunA17_Chr4g0004161 31.126 151 77 2 37 162 21 169 5.27e-13 68.9
Msa0372120 MtrunA17_Chr3g0129391 33.846 130 76 1 104 223 666 795 4.07e-14 72.0
Msa0372120 MtrunA17_Chr5g0446021 35.821 134 67 3 103 225 854 979 4.08e-14 72.0
Msa0372120 MtrunA17_Chr4g0006421 33.758 157 84 4 67 212 824 971 4.30e-14 72.0
Msa0372120 MtrunA17_Chr5g0440201 38.060 134 63 4 103 225 838 962 5.32e-14 71.6
Msa0372120 MtrunA17_Chr6g0455691 35.135 148 78 4 101 247 752 882 6.37e-14 71.6
Msa0372120 MtrunA17_Chr6g0455691 34.028 144 77 4 37 180 31 156 1.61e-12 67.4
Msa0372120 MtrunA17_Chr4g0032101 36.567 134 65 4 103 225 837 961 7.79e-14 71.2
Msa0372120 MtrunA17_Chr4g0032101 35.664 143 70 4 37 163 32 168 9.89e-11 62.0
Msa0372120 MtrunA17_Chr7g0231531 40.000 120 66 4 40 159 42 155 8.21e-14 70.9
Msa0372120 MtrunA17_Chr1g0165221 29.958 237 142 8 34 257 29 254 8.41e-14 71.2
Msa0372120 MtrunA17_Chr5g0446881 39.091 110 57 1 92 191 170 279 1.13e-13 69.7
Msa0372120 MtrunA17_Chr5g0440151 35.338 133 67 2 103 225 833 956 1.25e-13 70.9
Msa0372120 MtrunA17_Chr4g0003071 37.000 100 53 1 104 193 15 114 1.36e-13 67.8
Msa0372120 MtrunA17_Chr2g0304281 35.329 167 88 6 11 162 8 169 1.53e-13 70.5
Msa0372120 MtrunA17_Chr5g0440011 35.664 143 77 4 103 231 839 980 1.76e-13 70.1
Msa0372120 MtrunA17_Chr5g0440011 35.625 160 76 6 37 175 32 185 1.46e-12 67.4
Msa0372120 MtrunA17_Chr7g0222861 29.952 207 100 10 23 194 23 219 1.80e-13 68.2
Msa0372120 MtrunA17_Chr5g0439791 41.414 99 48 1 103 191 834 932 2.08e-13 70.1
Msa0372120 MtrunA17_Chr5g0439791 34.932 146 69 5 37 163 26 164 4.78e-11 63.2
Msa0372120 MtrunA17_Chr5g0445711 38.835 103 53 1 99 191 173 275 2.17e-13 69.3
Msa0372120 MtrunA17_Chr5g0440031 35.664 143 77 4 103 231 882 1023 2.22e-13 70.1
Msa0372120 MtrunA17_Chr7g0232131 37.600 125 62 4 40 159 42 155 2.23e-13 70.1
Msa0372120 MtrunA17_Chr7g0232211 41.026 117 63 4 43 159 36 146 2.52e-13 69.7
Msa0372120 MtrunA17_Chr5g0435341 32.026 153 76 4 79 225 656 786 2.65e-13 69.7
Msa0372120 MtrunA17_Chr7g0222871 30.189 212 103 11 19 194 19 221 2.72e-13 67.4
Msa0372120 MtrunA17_Chr5g0439821 34.965 143 78 4 103 231 898 1039 3.06e-13 69.7
Msa0372120 MtrunA17_Chr5g0435331 32.026 153 76 4 79 225 845 975 3.44e-13 69.3
Msa0372120 MtrunA17_Chr1g0165901 33.750 160 68 5 41 167 100 254 3.47e-13 69.3
Msa0372120 MtrunA17_Chr1g0165901 38.462 104 49 3 79 167 391 494 9.88e-11 62.0
Msa0372120 MtrunA17_Chr4g0051961 36.154 130 67 3 76 189 658 787 3.50e-13 69.3
Msa0372120 MtrunA17_Chr7g0241491 34.810 158 81 4 95 232 936 1091 3.89e-13 69.3
Msa0372120 MtrunA17_Chr8g0363501 32.090 134 73 3 79 194 36 169 4.15e-13 68.9
Msa0372120 MtrunA17_Chr4g0006931 39.000 100 51 1 99 188 103 202 4.47e-13 67.8
Msa0372120 MtrunA17_Chr7g0216801 33.333 168 84 6 99 254 761 912 4.76e-13 68.9
Msa0372120 MtrunA17_Chr2g0284121 30.114 176 101 5 41 197 692 864 4.88e-13 68.9
Msa0372120 MtrunA17_Chr1g0202001 33.143 175 100 7 14 178 52 219 4.88e-13 68.9
Msa0372120 MtrunA17_Chr5g0439811 33.775 151 85 4 95 231 721 870 5.14e-13 68.9
Msa0372120 MtrunA17_Chr7g0245171 29.907 214 93 10 32 194 21 228 5.31e-13 68.6
Msa0372120 MtrunA17_Chr5g0440161 37.313 134 64 4 103 225 878 1002 5.78e-13 68.6
Msa0372120 MtrunA17_Chr5g0440161 31.977 172 92 6 8 163 6 168 4.24e-11 63.2
Msa0372120 MtrunA17_Chr8g0363281 29.050 179 100 5 79 230 315 493 5.79e-13 68.6
Msa0372120 MtrunA17_Chr7g0222881 30.189 212 103 11 19 194 19 221 6.82e-13 66.2
Msa0372120 MtrunA17_Chr2g0291771 34.351 131 71 3 79 194 473 603 7.00e-13 68.6
Msa0372120 MtrunA17_Chr5g0436591 33.083 133 67 3 32 159 35 150 7.49e-13 66.6
Msa0372120 MtrunA17_Chr5g0403401 35.461 141 75 5 39 169 29 163 7.63e-13 68.6
Msa0372120 MtrunA17_Chr8g0362941 31.387 137 76 3 79 197 256 392 7.67e-13 68.2
Msa0372120 MtrunA17_Chr1g0212351 31.507 146 84 4 65 194 443 588 7.72e-13 68.2
Msa0372120 MtrunA17_Chr1g0212351 26.500 200 90 5 13 159 12 207 2.16e-11 63.9
Msa0372120 MtrunA17_Chr7g0232451 32.667 150 75 3 35 162 47 192 8.12e-13 68.2
Msa0372120 MtrunA17_Chr8g0351951 35.115 131 70 2 79 194 235 365 8.75e-13 67.4
Msa0372120 MtrunA17_Chr5g0439931 37.795 127 59 4 114 229 20 137 8.85e-13 64.7
Msa0372120 MtrunA17_Chr7g0257621 27.041 196 106 6 76 254 381 556 9.07e-13 68.2
Msa0372120 MtrunA17_Chr1g0165951 34.507 142 71 3 41 162 32 171 9.16e-13 68.2
Msa0372120 MtrunA17_Chr6g0455731 41.176 119 53 4 67 173 730 843 1.01e-12 67.8
Msa0372120 MtrunA17_Chr6g0455731 37.405 131 68 5 37 162 31 152 6.89e-12 65.5
Msa0372120 MtrunA17_Chr1g0165881 28.500 200 103 6 1 167 1 193 1.03e-12 65.9
Msa0372120 MtrunA17_Chr3g0097511 49.275 69 32 3 19 87 17 82 1.27e-12 63.9
Msa0372120 MtrunA17_Chr8g0363241 32.090 134 73 3 79 194 258 391 1.33e-12 67.4
Msa0372120 MtrunA17_Chr6g0455761 37.097 124 70 3 37 160 31 146 1.45e-12 67.4
Msa0372120 MtrunA17_Chr7g0216661 38.835 103 53 1 99 191 337 439 1.62e-12 67.0
Msa0372120 MtrunA17_Chr8g0363691 31.387 137 76 3 79 197 764 900 1.76e-12 67.4
Msa0372120 MtrunA17_Chr6g0464831 37.931 116 62 4 37 144 10 123 1.76e-12 65.5
Msa0372120 MtrunA17_Chr8g0362981 30.657 137 77 3 79 197 256 392 1.94e-12 67.0
Msa0372120 MtrunA17_Chr4g0023641 40.870 115 56 4 37 146 34 141 2.14e-12 65.9
Msa0372120 MtrunA17_Chr1g0165271 35.507 138 80 3 28 162 23 154 2.24e-12 66.6
Msa0372120 MtrunA17_Chr4g0024361 36.567 134 65 4 103 225 878 1002 2.36e-12 67.0
Msa0372120 MtrunA17_Chr3g0097681 30.978 184 73 7 21 153 20 200 2.37e-12 66.2
Msa0372120 MtrunA17_Chr3g0097271 37.500 128 68 5 21 144 20 139 2.71e-12 65.9
Msa0372120 MtrunA17_Chr1g0201241 36.752 117 61 2 50 162 35 142 3.15e-12 66.6
Msa0372120 MtrunA17_Chr3g0142271 34.848 132 70 3 76 191 618 749 3.34e-12 66.6
Msa0372120 MtrunA17_Chr1g0165231 35.507 138 80 3 28 162 23 154 3.92e-12 66.2
Msa0372120 MtrunA17_Chr1g0165301 35.507 138 80 3 28 162 23 154 3.92e-12 66.2
Msa0372120 MtrunA17_Chr6g0455681 34.646 127 77 4 37 162 31 152 4.16e-12 65.1
Msa0372120 MtrunA17_Chr8g0363601 32.331 133 72 3 83 197 294 426 4.19e-12 66.2
Msa0372120 MtrunA17_Chr8g0363061 31.387 137 76 3 79 197 496 632 4.28e-12 66.2
Msa0372120 MtrunA17_Chr4g0007471 38.583 127 63 4 111 228 279 399 4.44e-12 65.9
Msa0372120 MtrunA17_Chr5g0408621 31.579 171 89 5 12 169 55 210 4.51e-12 66.2
Msa0372120 MtrunA17_Chr5g0441511 44.898 98 44 1 104 191 75 172 4.54e-12 63.5
Msa0372120 MtrunA17_Chr5g0446201 32.353 136 73 5 37 160 63 191 4.58e-12 63.9
Msa0372120 MtrunA17_Chr5g0398441 34.146 123 62 2 76 193 395 503 4.81e-12 65.9
Msa0372120 MtrunA17_Chr4g0012841 35.652 115 67 3 40 153 29 137 4.90e-12 65.9
Msa0372120 MtrunA17_Chr4g0012841 32.540 126 70 2 79 189 347 472 4.06e-11 63.2
Msa0372120 MtrunA17_Chr6g0465221 43.038 79 43 1 72 150 50 126 5.12e-12 61.6
Msa0372120 MtrunA17_Chr4g0006451 33.333 135 68 4 73 197 417 539 5.24e-12 65.5
Msa0372120 MtrunA17_Chr4g0050731 39.506 81 36 2 128 195 7 87 5.39e-12 60.5
Msa0372120 MtrunA17_Chr1g0204461 33.065 124 80 1 39 162 39 159 5.46e-12 65.9
Msa0372120 MtrunA17_Chr4g0051281 30.128 156 82 5 33 164 28 180 6.06e-12 65.1
Msa0372120 MtrunA17_Chr5g0423121 29.000 200 92 7 41 194 29 224 6.94e-12 65.5
Msa0372120 MtrunA17_Chr2g0283921 35.849 106 57 2 104 198 712 817 7.14e-12 65.5
Msa0372120 MtrunA17_Chr7g0250381 31.783 129 79 3 38 164 22 143 7.15e-12 65.5
Msa0372120 MtrunA17_Chr5g0440101 36.567 134 65 4 103 225 884 1008 7.43e-12 65.5
Msa0372120 MtrunA17_Chr2g0296601 28.859 149 84 3 37 163 20 168 8.30e-12 65.5
Msa0372120 MtrunA17_Chr8g0372861 37.736 106 55 2 104 198 712 817 8.51e-12 65.1
Msa0372120 MtrunA17_Chr4g0007551 44.330 97 44 1 104 190 442 538 8.79e-12 65.1
Msa0372120 MtrunA17_Chr4g0013491 28.977 176 103 5 41 197 220 392 8.81e-12 65.1
Msa0372120 MtrunA17_Chr8g0362931 33.077 130 69 3 83 194 689 818 9.35e-12 65.1
Msa0372120 MtrunA17_Chr4g0019801 35.849 159 63 8 28 151 21 175 1.02e-11 65.1
Msa0372120 MtrunA17_Chr1g0165281 38.525 122 64 4 44 162 72 185 1.04e-11 65.1
Msa0372120 MtrunA17_Chr1g0165241 38.525 122 64 4 44 162 72 185 1.04e-11 65.1
Msa0372120 MtrunA17_Chr1g0165311 38.525 122 64 4 44 162 72 185 1.04e-11 65.1
Msa0372120 MtrunA17_Chr5g0413291 28.221 163 85 5 54 188 46 204 1.07e-11 64.7
Msa0372120 MtrunA17_Chr1g0169841 35.036 137 72 4 79 198 594 730 1.07e-11 65.1
Msa0372120 MtrunA17_Chr6g0478111 33.566 143 76 5 70 195 499 639 1.15e-11 64.7
Msa0372120 MtrunA17_Chr7g0215761 36.719 128 66 3 103 215 776 903 1.19e-11 64.7
Msa0372120 MtrunA17_Chr7g0215761 35.971 139 70 6 37 163 30 161 2.40e-11 63.9
Msa0372120 MtrunA17_Chr8g0362431 31.579 133 73 3 83 197 302 434 1.35e-11 64.7
Msa0372120 MtrunA17_Chr2g0278851 33.103 145 77 3 54 186 49 185 1.37e-11 64.3
Msa0372120 MtrunA17_Chr2g0284191 30.000 140 80 3 76 197 359 498 1.42e-11 64.3
Msa0372120 MtrunA17_Chr7g0250401 35.043 117 70 2 37 153 24 134 1.42e-11 64.3
Msa0372120 MtrunA17_Chr4g0019861 34.932 146 65 6 33 151 25 167 1.45e-11 64.7
Msa0372120 MtrunA17_Chr4g0019841 31.792 173 98 6 2 162 6 170 1.50e-11 64.3
Msa0372120 MtrunA17_Chr4g0019841 43.590 78 42 1 87 162 848 925 5.59e-11 62.8
Msa0372120 MtrunA17_Chr8g0363111 33.333 123 67 2 83 190 504 626 1.56e-11 64.3
Msa0372120 MtrunA17_Chr1g0165141 36.667 150 84 6 16 162 14 155 1.93e-11 64.3
Msa0372120 MtrunA17_Chr2g0296591 28.859 149 84 3 37 163 20 168 1.95e-11 64.3
Msa0372120 MtrunA17_Chr2g0282831 32.824 131 73 3 79 195 460 589 1.96e-11 64.3
Msa0372120 MtrunA17_Chr7g0216761 37.864 103 54 1 99 191 94 196 2.02e-11 62.8
Msa0372120 MtrunA17_Chr1g0165161 36.424 151 85 6 16 162 4 147 2.18e-11 61.6
Msa0372120 MtrunA17_Chr3g0113221 31.126 151 86 3 29 162 25 174 2.38e-11 63.9
Msa0372120 MtrunA17_Chr3g0095201 31.206 141 79 3 76 198 501 641 2.38e-11 63.9
Msa0372120 MtrunA17_Chr7g0250491 31.847 157 90 6 10 164 14 155 2.45e-11 63.9
Msa0372120 MtrunA17_Chr8g0363001 25.991 227 117 8 13 208 8 214 2.51e-11 62.4
Msa0372120 MtrunA17_Chr3g0087811 27.933 179 77 4 37 168 24 197 2.60e-11 63.2
Msa0372120 MtrunA17_Chr7g0232171 35.484 124 64 4 41 159 43 155 2.77e-11 63.5
Msa0372120 MtrunA17_Chr7g0216701 34.337 166 87 5 99 254 749 902 3.13e-11 63.5
Msa0372120 MtrunA17_Chr7g0216641 37.864 103 54 1 99 191 744 846 3.14e-11 63.5
Msa0372120 MtrunA17_Chr4g0022061 34.483 116 72 3 37 151 60 172 3.49e-11 62.8
Msa0372120 MtrunA17_Chr3g0127701 30.818 159 79 5 38 167 24 180 3.65e-11 63.2
Msa0372120 MtrunA17_Chr5g0437741 31.288 163 88 6 64 204 231 391 4.22e-11 63.2
Msa0372120 MtrunA17_Chr6g0455791 37.069 116 68 3 60 174 122 233 4.91e-11 62.0
Msa0372120 MtrunA17_Chr7g0250351 29.167 144 70 3 42 153 26 169 4.96e-11 62.8
Msa0372120 MtrunA17_Chr8g0362871 30.370 135 76 3 81 197 292 426 5.06e-11 62.8
Msa0372120 MtrunA17_Chr3g0127671 30.818 159 79 5 38 167 66 222 5.57e-11 62.8
Msa0372120 MtrunA17_Chr1g0203631 33.136 169 84 7 14 162 7 166 5.61e-11 62.8
Msa0372120 MtrunA17_Chr4g0007131 26.971 241 148 8 10 243 6 225 5.65e-11 62.8
Msa0372120 MtrunA17_Chr8g0380941 31.944 144 75 5 41 162 37 179 5.69e-11 62.8
Msa0372120 MtrunA17_Chr8g0380951 31.944 144 75 5 41 162 37 179 5.75e-11 62.8
Msa0372120 MtrunA17_Chr8g0363221 31.579 133 73 3 83 197 379 511 5.80e-11 62.8
Msa0372120 MtrunA17_Chr7g0222911 32.576 132 75 4 76 195 230 359 6.08e-11 62.0
Msa0372120 MtrunA17_Chr4g0058761 34.559 136 72 3 44 169 33 161 6.24e-11 62.8
Msa0372120 MtrunA17_Chr1g0159861 28.655 171 100 4 4 154 5 173 6.40e-11 60.1
Msa0372120 MtrunA17_Chr7g0216781 36.893 103 55 1 99 191 266 368 6.89e-11 62.0
Msa0372120 MtrunA17_Chr5g0408611 31.944 144 78 4 38 162 28 170 7.03e-11 62.4
Msa0372120 MtrunA17_Chr3g0123891 31.429 175 87 6 44 189 32 202 7.06e-11 62.4
Msa0372120 MtrunA17_Chr5g0439491 29.530 149 81 2 37 162 47 194 7.37e-11 62.0
Msa0372120 MtrunA17_Chr8g0367351 28.931 159 93 3 14 153 11 168 7.51e-11 62.4
Msa0372120 MtrunA17_Chr8g0363121 32.331 133 72 3 83 197 304 436 7.83e-11 62.4
Msa0372120 MtrunA17_Chr7g0214121 34.188 117 70 3 44 160 65 174 8.13e-11 60.8
Msa0372120 MtrunA17_Chr3g0120441 30.556 144 78 4 38 159 26 169 8.20e-11 61.6
Msa0372120 MtrunA17_Chr8g0363371 33.077 130 69 3 83 194 316 445 8.39e-11 62.0
Msa0372120 MtrunA17_Chr8g0362961 32.331 133 72 3 83 197 744 876 8.59e-11 62.4
Msa0372120 MtrunA17_Chr8g0362841 33.077 130 69 3 83 194 346 475 9.11e-11 62.0
Msa0372120 MtrunA17_Chr2g0296281 39.241 79 38 1 104 172 107 185 9.40e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0372120 AT2G01950.1 42.308 104 50 1 103 196 626 729 3.38e-18 84.7
Msa0372120 AT5G23400.1 37.671 146 75 4 65 194 439 584 1.39e-17 82.8
Msa0372120 AT3G05660.1 43.103 116 54 2 99 202 698 813 2.00e-17 82.4
Msa0372120 AT1G74190.1 32.558 172 99 5 95 255 786 951 2.96e-17 82.0
Msa0372120 AT1G31420.2 28.395 243 128 8 41 253 33 259 4.94e-17 80.9
Msa0372120 AT1G31420.1 28.395 243 128 8 41 253 33 259 5.86e-17 80.9
Msa0372120 AT1G31420.3 28.395 243 128 8 41 253 33 259 5.86e-17 80.9
Msa0372120 AT4G13920.1 44.444 99 45 1 103 191 728 826 2.70e-16 79.0
Msa0372120 AT2G34930.1 34.194 155 59 4 79 192 745 897 7.60e-16 77.8
Msa0372120 AT3G24982.1 46.465 99 43 1 103 191 748 846 1.17e-15 77.0
Msa0372120 AT1G47890.1 43.810 105 48 2 103 196 846 950 1.65e-15 76.6
Msa0372120 AT4G39400.1 40.196 102 51 1 104 195 670 771 2.41e-15 76.3
Msa0372120 AT4G13880.1 42.424 99 47 1 103 191 570 668 3.09e-15 75.9
Msa0372120 AT3G24900.1 45.455 99 44 1 103 191 717 815 3.34e-15 75.9
Msa0372120 AT3G24900.2 45.455 99 44 1 103 191 748 846 3.84e-15 75.5
Msa0372120 AT1G45616.1 43.689 103 48 1 99 191 815 917 4.18e-15 75.5
Msa0372120 AT1G74170.1 31.609 174 98 7 95 255 786 951 4.51e-15 75.5
Msa0372120 AT1G74170.2 31.609 174 98 7 95 255 854 1019 4.53e-15 75.5
Msa0372120 AT1G33670.1 29.825 171 89 5 21 163 12 179 7.39e-15 74.3
Msa0372120 AT3G25020.1 45.455 99 44 1 103 191 715 813 8.51e-15 74.7
Msa0372120 AT3G05650.1 41.121 107 53 1 95 191 683 789 8.61e-15 74.7
Msa0372120 AT2G33060.1 44.660 103 47 1 99 191 613 715 8.84e-15 74.3
Msa0372120 AT1G07390.3 42.000 100 48 1 101 190 897 996 1.07e-14 74.3
Msa0372120 AT1G07390.2 42.000 100 48 1 101 190 727 826 1.10e-14 74.3
Msa0372120 AT1G07390.4 42.000 100 48 1 101 190 891 990 1.14e-14 74.3
Msa0372120 AT1G07390.1 42.000 100 48 1 101 190 848 947 1.17e-14 74.3
Msa0372120 AT1G07390.5 42.000 100 48 1 101 190 862 961 1.19e-14 74.3
Msa0372120 AT2G32660.1 44.660 103 47 1 99 191 418 520 1.63e-14 73.6
Msa0372120 AT2G32660.2 44.660 103 47 1 99 191 600 702 1.91e-14 73.6
Msa0372120 AT3G25010.1 44.444 99 45 1 103 191 716 814 3.34e-14 72.8
Msa0372120 AT3G25010.2 44.444 99 45 1 103 191 747 845 3.46e-14 72.8
Msa0372120 AT5G40170.1 37.879 132 67 3 83 204 610 736 3.63e-14 72.8
Msa0372120 AT2G01210.1 34.109 129 68 2 44 155 27 155 5.60e-14 72.0
Msa0372120 AT2G33020.1 43.434 99 46 1 103 191 704 802 5.81e-14 72.0
Msa0372120 AT4G37250.1 27.807 187 103 4 17 175 5 187 6.96e-14 71.6
Msa0372120 AT5G67280.1 26.875 160 93 3 15 155 13 167 7.94e-14 71.6
Msa0372120 AT5G53890.1 33.908 174 89 4 104 265 552 711 1.05e-13 71.2
Msa0372120 AT3G05360.1 31.551 187 102 7 10 178 13 191 1.38e-13 70.9
Msa0372120 AT5G49290.1 32.530 166 84 7 104 253 735 888 1.45e-13 70.9
Msa0372120 AT5G49290.7 32.530 166 84 7 104 253 707 860 1.59e-13 70.9
Msa0372120 AT5G49290.5 32.530 166 84 7 104 253 732 885 1.65e-13 70.9
Msa0372120 AT2G33030.1 42.424 99 47 1 103 191 50 148 1.67e-13 68.6
Msa0372120 AT2G32680.1 40.404 99 49 1 103 191 715 813 1.74e-13 70.5
Msa0372120 AT5G65710.1 38.211 123 61 3 83 191 497 618 1.83e-13 70.5
Msa0372120 AT5G49290.4 32.530 166 84 7 104 253 760 913 1.84e-13 70.5
Msa0372120 AT5G49290.6 32.530 166 84 7 104 253 760 913 1.84e-13 70.5
Msa0372120 AT5G49290.8 32.530 166 84 7 104 253 760 913 1.84e-13 70.5
Msa0372120 AT4G04220.1 40.952 105 51 2 95 188 649 753 1.84e-13 70.5
Msa0372120 AT5G49290.2 32.530 166 84 7 104 253 774 927 1.92e-13 70.5
Msa0372120 AT5G25910.1 42.718 103 49 1 99 191 637 739 2.28e-13 70.1
Msa0372120 AT5G44700.1 30.769 156 70 4 79 196 706 861 2.33e-13 70.5
Msa0372120 AT1G33610.1 27.368 190 100 5 15 169 8 194 2.35e-13 70.1
Msa0372120 AT1G55610.1 42.574 101 48 1 104 194 655 755 2.43e-13 70.5
Msa0372120 AT1G55610.2 42.574 101 48 1 104 194 655 755 2.43e-13 70.5
Msa0372120 AT5G49290.9 32.530 166 84 7 104 253 517 670 2.49e-13 70.1
Msa0372120 AT2G33050.1 41.748 103 50 1 99 191 603 705 2.81e-13 70.1
Msa0372120 AT1G74180.2 40.206 97 48 1 104 190 785 881 2.84e-13 70.1
Msa0372120 AT1G74180.1 40.206 97 48 1 104 190 799 895 2.85e-13 70.1
Msa0372120 AT2G25440.1 42.857 98 46 1 104 191 505 602 3.08e-13 69.7
Msa0372120 AT4G13810.3 35.537 121 59 2 76 191 453 559 3.26e-13 69.7
Msa0372120 AT4G13810.1 35.537 121 59 2 76 191 359 465 3.39e-13 69.7
Msa0372120 AT2G33170.2 35.338 133 70 3 79 195 599 731 3.88e-13 69.7
Msa0372120 AT2G33170.1 35.338 133 70 3 79 195 599 731 3.88e-13 69.7
Msa0372120 AT4G13810.2 35.537 121 59 2 76 191 535 641 4.51e-13 69.3
Msa0372120 AT4G13810.2 34.259 108 67 2 55 162 56 159 5.00e-11 63.2
Msa0372120 AT1G17250.1 34.286 140 78 4 104 231 601 738 6.81e-13 68.9
Msa0372120 AT1G66830.1 31.538 130 71 2 44 155 28 157 8.24e-13 68.6
Msa0372120 AT2G15042.1 29.480 173 97 6 99 256 248 410 1.02e-12 67.8
Msa0372120 AT1G33600.1 27.411 197 92 4 15 163 8 201 1.04e-12 68.2
Msa0372120 AT1G33600.2 27.411 197 92 4 15 163 8 201 1.04e-12 68.2
Msa0372120 AT1G54475.1 40.206 97 48 1 104 190 36 132 1.09e-12 65.9
Msa0372120 AT3G53240.2 36.134 119 65 2 104 212 754 871 1.15e-12 68.2
Msa0372120 AT2G25470.3 39.175 97 49 1 104 190 805 901 1.16e-12 68.2
Msa0372120 AT3G53240.1 36.134 119 65 2 104 212 718 835 1.22e-12 68.2
Msa0372120 AT3G53240.3 36.134 119 65 2 104 212 718 835 1.22e-12 68.2
Msa0372120 AT1G72300.1 40.594 101 50 1 101 191 594 694 1.34e-12 68.2
Msa0372120 AT2G25470.1 39.175 97 49 1 104 190 762 858 1.37e-12 68.2
Msa0372120 AT2G15080.1 39.815 108 54 2 99 195 805 912 1.65e-12 67.8
Msa0372120 AT2G15080.2 39.815 108 54 2 99 195 805 912 1.65e-12 67.8
Msa0372120 AT1G71400.1 33.136 169 91 6 99 254 669 828 1.68e-12 67.8
Msa0372120 AT5G46330.2 35.156 128 67 4 82 193 662 789 2.71e-12 67.0
Msa0372120 AT5G46330.1 35.156 128 67 4 82 193 662 789 2.71e-12 67.0
Msa0372120 AT1G17230.3 32.331 133 74 3 79 195 581 713 3.78e-12 66.6
Msa0372120 AT1G17230.2 32.331 133 74 3 79 195 581 713 3.90e-12 66.6
Msa0372120 AT1G17230.1 32.331 133 74 3 79 195 581 713 3.98e-12 66.6
Msa0372120 AT3G11010.1 41.748 103 50 1 99 191 714 816 4.30e-12 66.6
Msa0372120 AT3G11010.1 30.201 149 70 5 50 167 2 147 5.44e-11 63.2
Msa0372120 AT3G11010.5 41.748 103 50 1 99 191 690 792 4.60e-12 66.2
Msa0372120 AT3G11010.6 41.748 103 50 1 99 191 681 783 4.80e-12 66.2
Msa0372120 AT3G11010.3 41.748 103 50 1 99 191 753 855 4.81e-12 66.2
Msa0372120 AT3G11010.3 29.193 161 76 5 37 162 38 195 1.39e-11 65.1
Msa0372120 AT3G11010.2 41.748 103 50 1 99 191 777 879 5.06e-12 66.2
Msa0372120 AT3G11010.2 28.977 176 77 6 37 167 38 210 6.20e-12 65.9
Msa0372120 AT1G08590.1 32.867 143 81 3 79 206 494 636 5.09e-12 66.2
Msa0372120 AT3G11010.4 41.748 103 50 1 99 191 744 846 5.26e-12 66.2
Msa0372120 AT3G13380.1 41.584 101 49 1 104 194 655 755 6.63e-12 65.9
Msa0372120 AT1G25320.1 35.156 128 65 3 44 153 29 156 6.67e-12 65.9
Msa0372120 AT3G05370.1 31.579 171 78 7 36 168 29 198 8.28e-12 65.5
Msa0372120 AT3G05370.1 33.600 125 70 2 74 188 656 777 9.27e-11 62.4
Msa0372120 AT1G48480.1 25.200 250 117 10 41 231 36 274 9.26e-12 65.5
Msa0372120 AT5G56040.1 38.053 113 41 3 54 154 43 138 1.21e-11 65.1
Msa0372120 AT1G12460.1 32.283 127 71 2 80 191 367 493 1.23e-11 65.1
Msa0372120 AT5G01890.1 30.645 124 71 2 81 189 445 568 1.25e-11 65.1
Msa0372120 AT2G41820.1 33.103 145 76 4 68 191 368 512 1.31e-11 65.1
Msa0372120 AT1G71390.2 31.884 138 71 3 37 153 37 172 1.46e-11 64.7
Msa0372120 AT1G12460.2 32.283 127 71 2 80 191 228 354 1.46e-11 64.7
Msa0372120 AT1G71390.1 31.884 138 71 3 37 153 32 167 1.51e-11 64.7
Msa0372120 AT5G56040.2 38.053 113 41 3 54 154 43 138 1.57e-11 64.7
Msa0372120 AT3G47110.1 32.468 154 94 4 8 157 3 150 1.61e-11 64.7
Msa0372120 AT2G42290.1 27.143 140 85 2 44 166 30 169 1.98e-11 64.3
Msa0372120 AT1G74360.1 32.787 122 65 3 79 184 580 700 2.22e-11 64.3
Msa0372120 AT1G62950.1 34.646 127 65 3 80 191 372 495 2.67e-11 63.9
Msa0372120 AT5G62710.1 27.184 206 112 5 12 188 6 202 2.75e-11 63.9
Msa0372120 AT4G20140.1 33.562 146 66 4 60 184 47 182 2.80e-11 64.3
Msa0372120 AT4G20140.1 29.487 156 72 4 79 196 705 860 3.53e-11 63.9
Msa0372120 AT3G02880.1 28.163 245 116 8 39 231 27 263 2.97e-11 63.9
Msa0372120 AT3G47570.1 36.752 117 68 3 38 154 22 132 3.40e-11 63.9
Msa0372120 AT1G58190.1 28.846 156 85 6 103 236 761 912 3.56e-11 63.9
Msa0372120 AT4G22730.2 35.849 106 63 1 62 162 85 190 4.11e-11 63.2
Msa0372120 AT4G22730.1 35.849 106 63 1 62 162 85 190 4.24e-11 63.5
Msa0372120 AT3G12145.1 34.109 129 71 4 37 162 24 141 4.82e-11 62.4
Msa0372120 AT2G23300.1 31.884 138 72 3 45 162 38 173 6.07e-11 63.2
Msa0372120 AT2G26330.1 26.282 156 77 2 72 189 406 561 6.85e-11 62.8
Msa0372120 AT2G02220.1 31.034 174 98 6 28 200 22 174 8.37e-11 62.8
Msa0372120 AT4G18640.1 34.821 112 65 3 43 153 31 135 9.76e-11 62.4

Find 74 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATTTGCAGTGGGTTTC+TGG 0.125463 3_1:-70439309 Msa0372120:intron
TAATCACGTGTTTGTGGTTT+TGG 0.161664 3_1:-70439227 Msa0372120:CDS
CAACTTTCACTTACGTCAAT+TGG 0.290050 3_1:+70439198 None:intergenic
GTGGTTCTCTATTCCTCAAC+AGG 0.299153 3_1:-70439279 Msa0372120:CDS
TTTCACAGTCACTCTACTTT+GGG 0.299417 3_1:-70439339 Msa0372120:CDS
TCCTGCTATGTTGGGAATCC+TGG 0.304672 3_1:-70439451 Msa0372120:CDS
CTTCACAAATTCCCATTGTT+TGG 0.325884 3_1:-70441775 Msa0372120:CDS
CCTCCAGCATGCTTTCCTCT+TGG 0.340003 3_1:-70441622 Msa0372120:CDS
CTCTATTCCTCAACAGGGCT+TGG 0.346787 3_1:-70439273 Msa0372120:CDS
AAACCACAAACACGTGATTA+AGG 0.358004 3_1:+70439230 None:intergenic
AAACATAGAAGAAAGTTTAA+TGG 0.365612 3_1:-70438904 Msa0372120:exon
AGTGATGTTACTTATGCATT+TGG 0.365907 3_1:+70439861 None:intergenic
GACAAAGTTGACGTGGTAAC+AGG 0.371931 3_1:+70439556 None:intergenic
TAATTAATATCAACCATGTT+AGG 0.373720 3_1:-70441803 Msa0372120:exon
GTTGGGAATCCTGGACTTTG+TGG 0.378841 3_1:-70439442 Msa0372120:CDS
GTGATGTTACTTATGCATTT+GGG 0.381567 3_1:+70439862 None:intergenic
CAGTCACTCTACTTTGGGTT+GGG 0.385070 3_1:-70439334 Msa0372120:CDS
GTTTAATGGCACTAAAACTT+GGG 0.397579 3_1:-70438890 Msa0372120:three_prime_UTR
TTTCCAGCTGCATTCTGTCT+TGG 0.399018 3_1:+70438924 None:intergenic
TTCTCCAACAAGTTTATTGT+CGG 0.410001 3_1:+70439582 None:intergenic
TTGATGCTTCCTGCTATGTT+GGG 0.416328 3_1:-70439459 Msa0372120:CDS
CTTGGAGGCACACTTATTCT+CGG 0.420217 3_1:-70439255 Msa0372120:CDS
CTATCCGACAATAAACTTGT+TGG 0.425133 3_1:-70439586 Msa0372120:CDS
AGTTTAATGGCACTAAAACT+TGG 0.426971 3_1:-70438891 Msa0372120:three_prime_UTR
CTTTGAAGTTGAGTCCCAAC+CGG 0.436280 3_1:+70439484 None:intergenic
ATAGAAGAAGCAGATTGAAT+AGG 0.442416 3_1:-70438851 Msa0372120:three_prime_UTR
GTTCCTTAATCACGTGTTTG+TGG 0.443187 3_1:-70439233 Msa0372120:CDS
ACAGTCACTCTACTTTGGGT+TGG 0.444875 3_1:-70439335 Msa0372120:CDS
GTGGGTTTCTGGTGTATTTG+TGG 0.455476 3_1:-70439298 Msa0372120:CDS
GCATTGCTTCTCTTCAAACT+TGG 0.455507 3_1:-70441659 Msa0372120:CDS
TATGACTCATGATCACATAT+TGG 0.460335 3_1:+70439409 None:intergenic
CACTAAAACTTGGGGTAGAC+CGG 0.467111 3_1:-70438881 Msa0372120:three_prime_UTR
CATTGCGTCCTCCTCCATCT+AGG 0.471886 3_1:+70439386 None:intergenic
TTTGATGCTTCCTGCTATGT+TGG 0.485378 3_1:-70439460 Msa0372120:CDS
GATCATGAGTCATACCTAGA+TGG 0.490038 3_1:-70439400 Msa0372120:CDS
TATTCCTCAACAGGGCTTGG+AGG 0.493881 3_1:-70439270 Msa0372120:CDS
TTCGAGTCAAGTTCAATGAC+TGG 0.506734 3_1:+70439671 None:intergenic
TCCAGGATTCCCAACATAGC+AGG 0.512128 3_1:+70439450 None:intergenic
TTGACTCGAAATCATTTCAC+AGG 0.515613 3_1:-70439658 Msa0372120:CDS
GGTCCAAGACAGAATGCAGC+TGG 0.516634 3_1:-70438927 Msa0372120:CDS
AATAGTAGTAGCCAAACAAT+GGG 0.525178 3_1:+70441764 None:intergenic
GCTTCTCTTCAAACTTGGTG+TGG 0.527074 3_1:-70441654 Msa0372120:CDS
ACTAGATTGAAAACTTGTGC+GGG 0.529296 3_1:+70439700 None:intergenic
TTTGAAGTTGAGTCCCAACC+GGG 0.532723 3_1:+70439485 None:intergenic
GGACCAAGAGGAAAGCATGC+TGG 0.539160 3_1:+70441619 None:intergenic
GGACCTTCCTCAAGTGGTTG+CGG 0.550204 3_1:-70438830 Msa0372120:three_prime_UTR
CATAAGTAACATCACTGGCA+TGG 0.550885 3_1:-70439854 Msa0372120:CDS
TAATAGTAGTAGCCAAACAA+TGG 0.554033 3_1:+70441763 None:intergenic
TAGTTGGACAAATCCCGGTT+GGG 0.556636 3_1:-70439498 Msa0372120:CDS
ATAAATGCCGCAACCACTTG+AGG 0.560600 3_1:+70438823 None:intergenic
TTACCTAGTTGGACAAATCC+CGG 0.560887 3_1:-70439503 Msa0372120:intron
AATAGTAGCAATACGCAGCT+TGG 0.562229 3_1:-70441710 Msa0372120:CDS
TGAATAGGACCTTCCTCAAG+TGG 0.562799 3_1:-70438836 Msa0372120:three_prime_UTR
TCATGATCACATATTGGTAG+AGG 0.564596 3_1:+70439415 None:intergenic
AGAGGAGCTCCACAAAGTCC+AGG 0.572409 3_1:+70439433 None:intergenic
ATAAGTAACATCACTGGCAT+GGG 0.573172 3_1:-70439853 Msa0372120:CDS
TGTCTACAACAATATTTGAA+AGG 0.575525 3_1:-70441736 Msa0372120:CDS
CTAGTTGGACAAATCCCGGT+TGG 0.594453 3_1:-70439499 Msa0372120:intron
AACTAGATTGAAAACTTGTG+CGG 0.594695 3_1:+70439699 None:intergenic
AAATGCATAAGTAACATCAC+TGG 0.596936 3_1:-70439859 Msa0372120:CDS
TGGTAGTAACTGCAATGAGA+AGG 0.598363 3_1:-70441690 Msa0372120:CDS
TGTGCCTCCAAGCCCTGTTG+AGG 0.602594 3_1:+70439266 None:intergenic
TGGTTCTCTATTCCTCAACA+GGG 0.609242 3_1:-70439278 Msa0372120:CDS
TTTAATGGCACTAAAACTTG+GGG 0.618827 3_1:-70438889 Msa0372120:three_prime_UTR
CAGATTCAAGAAACTCAAGA+AGG 0.618918 3_1:+70439534 None:intergenic
TTGTGAAGTGAAGCCTAACA+TGG 0.622762 3_1:+70441790 None:intergenic
GAGTCATACCTAGATGGAGG+AGG 0.624078 3_1:-70439394 Msa0372120:CDS
ATGCCGCAACCACTTGAGGA+AGG 0.628839 3_1:+70438827 None:intergenic
GTTCAATGTGACAACATCAC+AGG 0.629334 3_1:-70441563 Msa0372120:intron
GGAAAGATATCAAGAGACAT+CGG 0.639864 3_1:-70439637 Msa0372120:CDS
CATGAGTCATACCTAGATGG+AGG 0.641691 3_1:-70439397 Msa0372120:CDS
CTAGATTGAAAACTTGTGCG+GGG 0.655795 3_1:+70439701 None:intergenic
CAAGAAGGACAAAGTTGACG+TGG 0.660483 3_1:+70439549 None:intergenic
CCAAGAGGAAAGCATGCTGG+AGG 0.665812 3_1:+70441622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAACAATTTTTTTCATTAA+TGG + chr3_1:70438925-70438944 None:intergenic 15.0%
!!! CATGAAAATTTAAAATATCT+TGG - chr3_1:70439605-70439624 Msa0372120:CDS 15.0%
!!! ATTTTGAATTGTATACAAAA+GGG - chr3_1:70440722-70440741 Msa0372120:intron 15.0%
!!! ATGAAAAAAATTGTTGTTCA+TGG - chr3_1:70438928-70438947 Msa0372120:CDS 20.0%
!! TATTATTATGATCATGTGAT+TGG + chr3_1:70439115-70439134 None:intergenic 20.0%
!!! CTTTTAAAAAATTGAAGCTA+AGG + chr3_1:70439487-70439506 None:intergenic 20.0%
!!! CTTAGCTTCAATTTTTTAAA+AGG - chr3_1:70439485-70439504 Msa0372120:CDS 20.0%
!! GGAAAATAATTTGGATTATT+TGG - chr3_1:70440249-70440268 Msa0372120:intron 20.0%
!!! ATTTCATTCAATCTTTTAAC+TGG - chr3_1:70440274-70440293 Msa0372120:intron 20.0%
!! AATTTGCAATTCATTCATAT+TGG - chr3_1:70440472-70440491 Msa0372120:intron 20.0%
!!! CTTTTGTATACAATTCAAAA+TGG + chr3_1:70440723-70440742 None:intergenic 20.0%
!!! CATTTTGAATTGTATACAAA+AGG - chr3_1:70440721-70440740 Msa0372120:intron 20.0%
!! ACTTCACAATAAAGAAAATA+AGG + chr3_1:70441379-70441398 None:intergenic 20.0%
!! AAACATAGAAGAAAGTTTAA+TGG - chr3_1:70441616-70441635 Msa0372120:CDS 20.0%
! TGTCTACAACAATATTTGAA+AGG - chr3_1:70438784-70438803 Msa0372120:three_prime_UTR 25.0%
!! AAAAATTGTTGTTCATGGAA+AGG - chr3_1:70438933-70438952 Msa0372120:intron 25.0%
! AGATTTGAGTGATGAAAATT+TGG + chr3_1:70439219-70439238 None:intergenic 25.0%
! TTAACAAACTCTTTGGTATT+TGG + chr3_1:70439511-70439530 None:intergenic 25.0%
! TTCGAAAACTTGAATCTTTA+AGG - chr3_1:70439534-70439553 Msa0372120:intron 25.0%
!!! ACTCTTTAATTTGAAGAGTT+TGG - chr3_1:70439748-70439767 Msa0372120:intron 25.0%
! GAATCCATATCAAATGAAAT+CGG + chr3_1:70439860-70439879 None:intergenic 25.0%
! CATTTGATATGGATTCTAAA+TGG - chr3_1:70439864-70439883 Msa0372120:CDS 25.0%
! AGTTTAAGCAATACAATTCT+AGG - chr3_1:70439914-70439933 Msa0372120:intron 25.0%
! ATTAGGTAGGGAAAATAATT+TGG - chr3_1:70440240-70440259 Msa0372120:intron 25.0%
!!! GCAAATTTGTTATGTTTGAT+AGG + chr3_1:70440459-70440478 None:intergenic 25.0%
! GTATACAATTCAAAATGGAA+TGG + chr3_1:70440718-70440737 None:intergenic 25.0%
!!! TGTGAAGTTTTTTGTATGAT+TGG - chr3_1:70441391-70441410 Msa0372120:intron 25.0%
AATAGTAGTAGCCAAACAAT+GGG + chr3_1:70438759-70438778 None:intergenic 30.0%
TAATAGTAGTAGCCAAACAA+TGG + chr3_1:70438760-70438779 None:intergenic 30.0%
!! TTTTTCATTAATGGACCAAG+AGG + chr3_1:70438916-70438935 None:intergenic 30.0%
ATTCAAGCTTAAGTCTAAGT+AGG + chr3_1:70439066-70439085 None:intergenic 30.0%
TACTTAGACTTAAGCTTGAA+TGG - chr3_1:70439065-70439084 Msa0372120:intron 30.0%
CATCATTAAAGGATAAGTCT+AGG + chr3_1:70439166-70439185 None:intergenic 30.0%
CAAGTGAAGATCATCATTAA+AGG + chr3_1:70439177-70439196 None:intergenic 30.0%
CTTTAATGATGATCTTCACT+TGG - chr3_1:70439175-70439194 Msa0372120:intron 30.0%
TTCACTTGGATAATCTTCAT+TGG - chr3_1:70439189-70439208 Msa0372120:intron 30.0%
! TTTGAAGGTTAATTTGACTG+AGG + chr3_1:70439247-70439266 None:intergenic 30.0%
TGATGCATGTAACATATCTA+TGG + chr3_1:70439291-70439310 None:intergenic 30.0%
AGTAAAACTCACATGCTTAA+CGG + chr3_1:70439363-70439382 None:intergenic 30.0%
ATTGAAGCTAAGGTCAATAT+GGG + chr3_1:70439477-70439496 None:intergenic 30.0%
AATTGAAGCTAAGGTCAATA+TGG + chr3_1:70439478-70439497 None:intergenic 30.0%
GAACTAAATGAATCTATTCC+TGG - chr3_1:70439569-70439588 Msa0372120:CDS 30.0%
TAAATGAATCTATTCCTGGT+TGG - chr3_1:70439573-70439592 Msa0372120:CDS 30.0%
! ATTAAAGAGTTTTCCAATGC+TGG + chr3_1:70439738-70439757 None:intergenic 30.0%
AATTTGAAGAGTTTGGTCAT+TGG - chr3_1:70439755-70439774 Msa0372120:intron 30.0%
! TGTTTCTAAACTAGAGAGAT+TGG + chr3_1:70439822-70439841 None:intergenic 30.0%
! TCTCTCTAGTTTAGAAACAT+TGG - chr3_1:70439823-70439842 Msa0372120:intron 30.0%
ATTCCTCCATTTCAATTGAA+CGG - chr3_1:70439887-70439906 Msa0372120:intron 30.0%
TATATCCATGTTGGAAACTT+AGG + chr3_1:70439941-70439960 None:intergenic 30.0%
CTTTGTGTATATATCCATGT+TGG + chr3_1:70439950-70439969 None:intergenic 30.0%
CAACATGGATATATACACAA+AGG - chr3_1:70439948-70439967 Msa0372120:intron 30.0%
AAACTCGGAACTTCTATTTA+TGG - chr3_1:70440108-70440127 Msa0372120:intron 30.0%
ATGGATCACAATAATTTCAG+AGG - chr3_1:70440127-70440146 Msa0372120:intron 30.0%
ATCACAATAATTTCAGAGGA+GGG - chr3_1:70440131-70440150 Msa0372120:intron 30.0%
TTGTCACACAATTCTTTCTT+TGG - chr3_1:70440190-70440209 Msa0372120:intron 30.0%
! TATTTTCCCTACCTAATTTG+TGG + chr3_1:70440237-70440256 None:intergenic 30.0%
! CTTGTCTGGTAATTTTTCAT+TGG - chr3_1:70440432-70440451 Msa0372120:intron 30.0%
ATTGGAGAAAACAATTTCTC+TGG - chr3_1:70440490-70440509 Msa0372120:intron 30.0%
TATCTCATCACTGATACAAT+TGG - chr3_1:70440603-70440622 Msa0372120:intron 30.0%
TTTCCCACAATAAACTTTCA+GGG - chr3_1:70440629-70440648 Msa0372120:intron 30.0%
! GTGATGTTACTTATGCATTT+GGG + chr3_1:70440661-70440680 None:intergenic 30.0%
! AGTGATGTTACTTATGCATT+TGG + chr3_1:70440662-70440681 None:intergenic 30.0%
AAATGCATAAGTAACATCAC+TGG - chr3_1:70440661-70440680 Msa0372120:intron 30.0%
! GACTTAGAGTATTATGACAA+TGG - chr3_1:70440748-70440767 Msa0372120:intron 30.0%
AACTAGATTGAAAACTTGTG+CGG + chr3_1:70440824-70440843 None:intergenic 30.0%
TTCTCCAACAAGTTTATTGT+CGG + chr3_1:70440941-70440960 None:intergenic 30.0%
TATGACTCATGATCACATAT+TGG + chr3_1:70441114-70441133 None:intergenic 30.0%
! TTTTTGTATGATTGGTACCA+CGG - chr3_1:70441399-70441418 Msa0372120:intron 30.0%
! TTGTAATTTTGTCAAACCCA+CGG + chr3_1:70441425-70441444 None:intergenic 30.0%
! GTGTGGCTTTTACAAAATTA+CGG + chr3_1:70441455-70441474 None:intergenic 30.0%
AGTTTAATGGCACTAAAACT+TGG - chr3_1:70441629-70441648 Msa0372120:CDS 30.0%
GTTTAATGGCACTAAAACTT+GGG - chr3_1:70441630-70441649 Msa0372120:CDS 30.0%
TTTAATGGCACTAAAACTTG+GGG - chr3_1:70441631-70441650 Msa0372120:CDS 30.0%
!!! TGCTTCTTCTATTTTGATTC+CGG + chr3_1:70441661-70441680 None:intergenic 30.0%
ATAGAAGAAGCAGATTGAAT+AGG - chr3_1:70441669-70441688 Msa0372120:CDS 30.0%
!! CGCATAACATTTTTAGACTT+TGG + chr3_1:70441788-70441807 None:intergenic 30.0%
CTTCACAAATTCCCATTGTT+TGG - chr3_1:70438745-70438764 Msa0372120:three_prime_UTR 35.0%
TGATCTACACCAACAATACT+TGG - chr3_1:70438995-70439014 Msa0372120:intron 35.0%
! TTTCACCTTCCAAGTATTGT+TGG + chr3_1:70439007-70439026 None:intergenic 35.0%
ACCTTCAAAACCAAACAAAC+TGG - chr3_1:70439258-70439277 Msa0372120:CDS 35.0%
! CTTAACGGATGCAAAGATAT+CGG + chr3_1:70439348-70439367 None:intergenic 35.0%
!! AATCAAAATGGTTTGCTGAG+AGG + chr3_1:70439406-70439425 None:intergenic 35.0%
CAGGTAATTCGGAATCAAAA+TGG + chr3_1:70439418-70439437 None:intergenic 35.0%
AAACAACCAAGCAGGTAATT+CGG + chr3_1:70439429-70439448 None:intergenic 35.0%
CGAAGACTTAACAAACTCTT+TGG + chr3_1:70439518-70439537 None:intergenic 35.0%
! AATCTATTCCTGGTTGGTTA+GGG - chr3_1:70439579-70439598 Msa0372120:CDS 35.0%
! AGAGTTTTCCAAGAGATGAA+GGG + chr3_1:70439661-70439680 None:intergenic 35.0%
AATATTCCCGGTCAGAAAAT+CGG + chr3_1:70439711-70439730 None:intergenic 35.0%
!! TGCACCGATTTCATTTGATA+TGG - chr3_1:70439853-70439872 Msa0372120:CDS 35.0%
TTCCTCCATTTCAATTGAAC+GGG - chr3_1:70439888-70439907 Msa0372120:intron 35.0%
CTTATCCCGTTCAATTGAAA+TGG + chr3_1:70439896-70439915 None:intergenic 35.0%
!! ATGGATGAAACTCTAGAGTT+AGG + chr3_1:70439995-70440014 None:intergenic 35.0%
! TCTAGAGTTTCATCCATAGA+TGG - chr3_1:70439998-70440017 Msa0372120:intron 35.0%
CCAAAATATGTCTCCATCTA+TGG + chr3_1:70440014-70440033 None:intergenic 35.0%
! CCATAGATGGAGACATATTT+TGG - chr3_1:70440011-70440030 Msa0372120:intron 35.0%
ATCTAATGTCACGCTAAACT+CGG - chr3_1:70440093-70440112 Msa0372120:intron 35.0%
GATCACAATAATTTCAGAGG+AGG - chr3_1:70440130-70440149 Msa0372120:intron 35.0%
! TGACATTTGCTGAGATATGT+GGG + chr3_1:70440159-70440178 None:intergenic 35.0%
! CTCAGCAAATGTCACTTATT+TGG - chr3_1:70440165-70440184 Msa0372120:intron 35.0%
! TAATTTGTGGCAGAACATAG+GGG + chr3_1:70440224-70440243 None:intergenic 35.0%
! CTAATTTGTGGCAGAACATA+GGG + chr3_1:70440225-70440244 None:intergenic 35.0%
! AGGCATATCTTTCCTTTTCA+TGG - chr3_1:70440327-70440346 Msa0372120:intron 35.0%
GCATATTACTCTCCATGAAA+AGG + chr3_1:70440342-70440361 None:intergenic 35.0%
TTGAGATCAAACCAGTTTGA+AGG - chr3_1:70440556-70440575 Msa0372120:intron 35.0%
TTGGAATGTTACCTTCAAAC+TGG + chr3_1:70440570-70440589 None:intergenic 35.0%
CTTTCCCACAATAAACTTTC+AGG - chr3_1:70440628-70440647 Msa0372120:intron 35.0%
AGACCCTGAAAGTTTATTGT+GGG + chr3_1:70440635-70440654 None:intergenic 35.0%
TAGACCCTGAAAGTTTATTG+TGG + chr3_1:70440636-70440655 None:intergenic 35.0%
ATAAGTAACATCACTGGCAT+GGG - chr3_1:70440667-70440686 Msa0372120:intron 35.0%
CTGATAAGTTGTTAGCTGAA+AGG + chr3_1:70440792-70440811 None:intergenic 35.0%
CTTTCAGCTAACAACTTATC+AGG - chr3_1:70440790-70440809 Msa0372120:intron 35.0%
ACTAGATTGAAAACTTGTGC+GGG + chr3_1:70440823-70440842 None:intergenic 35.0%
! TTGACTCGAAATCATTTCAC+AGG - chr3_1:70440862-70440881 Msa0372120:intron 35.0%
GGAAAGATATCAAGAGACAT+CGG - chr3_1:70440883-70440902 Msa0372120:intron 35.0%
CTATCCGACAATAAACTTGT+TGG - chr3_1:70440934-70440953 Msa0372120:intron 35.0%
CAGATTCAAGAAACTCAAGA+AGG + chr3_1:70440989-70441008 None:intergenic 35.0%
CTGTCAAACAATTACCTAGT+TGG - chr3_1:70441006-70441025 Msa0372120:intron 35.0%
TCATGATCACATATTGGTAG+AGG + chr3_1:70441108-70441127 None:intergenic 35.0%
! TTTTCACAGTCACTCTACTT+TGG - chr3_1:70441180-70441199 Msa0372120:intron 35.0%
TTTCACAGTCACTCTACTTT+GGG - chr3_1:70441181-70441200 Msa0372120:intron 35.0%
AAACCACAAACACGTGATTA+AGG + chr3_1:70441293-70441312 None:intergenic 35.0%
! TAATCACGTGTTTGTGGTTT+TGG - chr3_1:70441293-70441312 Msa0372120:intron 35.0%
! AATCACGTGTTTGTGGTTTT+GGG - chr3_1:70441294-70441313 Msa0372120:intron 35.0%
CAACTTTCACTTACGTCAAT+TGG + chr3_1:70441325-70441344 None:intergenic 35.0%
GGTTTGACAAAATTACAACG+AGG - chr3_1:70441427-70441446 Msa0372120:intron 35.0%
GCATATTTGAATCTGCAATG+AGG + chr3_1:70441492-70441511 None:intergenic 35.0%
! TAACGACTTTTGTGATTGTC+AGG - chr3_1:70441572-70441591 Msa0372120:CDS 35.0%
TTGTGAAGTGAAGCCTAACA+TGG + chr3_1:70438733-70438752 None:intergenic 40.0%
AATAGTAGCAATACGCAGCT+TGG - chr3_1:70438810-70438829 Msa0372120:three_prime_UTR 40.0%
TGGTAGTAACTGCAATGAGA+AGG - chr3_1:70438830-70438849 Msa0372120:three_prime_UTR 40.0%
GCATTGCTTCTCTTCAAACT+TGG - chr3_1:70438861-70438880 Msa0372120:three_prime_UTR 40.0%
GTTCAATGTGACAACATCAC+AGG - chr3_1:70438957-70438976 Msa0372120:intron 40.0%
CTACACCAACAATACTTGGA+AGG - chr3_1:70438999-70439018 Msa0372120:intron 40.0%
!!! GCCAGTTTGTTTGGTTTTGA+AGG + chr3_1:70439262-70439281 None:intergenic 40.0%
! TGGAATGAAGCCAGTTTGTT+TGG + chr3_1:70439271-70439290 None:intergenic 40.0%
TTGATTCCGAATTACCTGCT+TGG - chr3_1:70439420-70439439 Msa0372120:CDS 40.0%
! GAATCTATTCCTGGTTGGTT+AGG - chr3_1:70439578-70439597 Msa0372120:CDS 40.0%
AGAACCGCAAAACATGTTCT+CGG + chr3_1:70439636-70439655 None:intergenic 40.0%
! GAGAGTTTTCCAAGAGATGA+AGG + chr3_1:70439662-70439681 None:intergenic 40.0%
TCTTGGAAAACTCTCTTCCT+TGG - chr3_1:70439667-70439686 Msa0372120:CDS 40.0%
GCTAACACTTAAGTCAACCA+AGG + chr3_1:70439687-70439706 None:intergenic 40.0%
! AATGCTGGTTGGAATATTCC+CGG + chr3_1:70439723-70439742 None:intergenic 40.0%
! AAGAGTTTTCCAATGCTGGT+TGG + chr3_1:70439734-70439753 None:intergenic 40.0%
TTGAAGAGTTTGGTCATTGG+AGG - chr3_1:70439758-70439777 Msa0372120:intron 40.0%
ATTGGAGGAAATTCCTTGTC+AGG - chr3_1:70439773-70439792 Msa0372120:intron 40.0%
TTCAGATAGAACACCTGACA+AGG + chr3_1:70439789-70439808 None:intergenic 40.0%
ATCCCGTTCAATTGAAATGG+AGG + chr3_1:70439893-70439912 None:intergenic 40.0%
TAGGTCCTAAGTTTCCAACA+TGG - chr3_1:70439933-70439952 Msa0372120:intron 40.0%
! GTGACATTTGCTGAGATATG+TGG + chr3_1:70440160-70440179 None:intergenic 40.0%
! CCTAATTTGTGGCAGAACAT+AGG + chr3_1:70440226-70440245 None:intergenic 40.0%
CCTATGTTCTGCCACAAATT+AGG - chr3_1:70440223-70440242 Msa0372120:intron 40.0%
TGTTCTGCCACAAATTAGGT+AGG - chr3_1:70440227-70440246 Msa0372120:intron 40.0%
GTTCTGCCACAAATTAGGTA+GGG - chr3_1:70440228-70440247 Msa0372120:intron 40.0%
TGGAGACATTCCTGATTGTT+GGG - chr3_1:70440294-70440313 Msa0372120:intron 40.0%
! TTCCTGATTGTTGGGAGTAT+TGG - chr3_1:70440302-70440321 Msa0372120:intron 40.0%
TTCCAATACTCCCAACAATC+AGG + chr3_1:70440307-70440326 None:intergenic 40.0%
!! GATTGTTGGGAGTATTGGAA+AGG - chr3_1:70440307-70440326 Msa0372120:intron 40.0%
ATGGAGAGTAATATGCTAGC+TGG - chr3_1:70440346-70440365 Msa0372120:intron 40.0%
ATAAACGAGTTCATGGATGG+AGG + chr3_1:70440379-70440398 None:intergenic 40.0%
TCGATAAACGAGTTCATGGA+TGG + chr3_1:70440382-70440401 None:intergenic 40.0%
GAGATCGATAAACGAGTTCA+TGG + chr3_1:70440386-70440405 None:intergenic 40.0%
GTTTATCGATCTCATAGCAC+TGG - chr3_1:70440393-70440412 Msa0372120:intron 40.0%
TTGCATAACAACAGCTTGTC+TGG - chr3_1:70440418-70440437 Msa0372120:intron 40.0%
ATACTATGTGGCATCTTCAC+TGG + chr3_1:70440523-70440542 None:intergenic 40.0%
AGTGAAGATGCCACATAGTA+TGG - chr3_1:70440522-70440541 Msa0372120:intron 40.0%
ATCATCACCTCCATACTATG+TGG + chr3_1:70440535-70440554 None:intergenic 40.0%
GAGATATTGCACAGTTGTGT+TGG + chr3_1:70440589-70440608 None:intergenic 40.0%
CATAAGTAACATCACTGGCA+TGG - chr3_1:70440666-70440685 Msa0372120:intron 40.0%
CTAGATTGAAAACTTGTGCG+GGG + chr3_1:70440822-70440841 None:intergenic 40.0%
TTCGAGTCAAGTTCAATGAC+TGG + chr3_1:70440852-70440871 None:intergenic 40.0%
CATCGGAGACATGAAAAACT+TGG - chr3_1:70440900-70440919 Msa0372120:intron 40.0%
TTACCTAGTTGGACAAATCC+CGG - chr3_1:70441017-70441036 Msa0372120:intron 40.0%
TTTGATGCTTCCTGCTATGT+TGG - chr3_1:70441060-70441079 Msa0372120:intron 40.0%
TTGATGCTTCCTGCTATGTT+GGG - chr3_1:70441061-70441080 Msa0372120:intron 40.0%
GATCATGAGTCATACCTAGA+TGG - chr3_1:70441120-70441139 Msa0372120:intron 40.0%
TGGTTCTCTATTCCTCAACA+GGG - chr3_1:70441242-70441261 Msa0372120:intron 40.0%
GTTCCTTAATCACGTGTTTG+TGG - chr3_1:70441287-70441306 Msa0372120:intron 40.0%
AGGTTGACAGAATAACAGTG+TGG + chr3_1:70441472-70441491 None:intergenic 40.0%
! GCTTCTCTTCAAACTTGGTG+TGG - chr3_1:70438866-70438885 Msa0372120:three_prime_UTR 45.0%
CCTGCTTGGTTGTTTGAACA+CGG - chr3_1:70439434-70439453 Msa0372120:CDS 45.0%
! CTAGCCGAGAACATGTTTTG+CGG - chr3_1:70439629-70439648 Msa0372120:CDS 45.0%
GGTTCTATCCCTTCATCTCT+TGG - chr3_1:70439650-70439669 Msa0372120:CDS 45.0%
! GTTAGCTCCGATTTTCTGAC+CGG - chr3_1:70439701-70439720 Msa0372120:CDS 45.0%
! TTAGCTCCGATTTTCTGACC+GGG - chr3_1:70439702-70439721 Msa0372120:CDS 45.0%
GGGAATATTCCAACCAGCAT+TGG - chr3_1:70439722-70439741 Msa0372120:intron 45.0%
CTGGAGACATTCCTGATTGT+TGG - chr3_1:70440293-70440312 Msa0372120:intron 45.0%
ATGTGGCATCTTCACTGGTA+TGG + chr3_1:70440518-70440537 None:intergenic 45.0%
GAAGATGCCACATAGTATGG+AGG - chr3_1:70440525-70440544 Msa0372120:intron 45.0%
GACAAAGTTGACGTGGTAAC+AGG + chr3_1:70440967-70440986 None:intergenic 45.0%
CAAGAAGGACAAAGTTGACG+TGG + chr3_1:70440974-70440993 None:intergenic 45.0%
TAGTTGGACAAATCCCGGTT+GGG - chr3_1:70441022-70441041 Msa0372120:intron 45.0%
! TTTGAAGTTGAGTCCCAACC+GGG + chr3_1:70441038-70441057 None:intergenic 45.0%
!! CTTTGAAGTTGAGTCCCAAC+CGG + chr3_1:70441039-70441058 None:intergenic 45.0%
CATGAGTCATACCTAGATGG+AGG - chr3_1:70441123-70441142 Msa0372120:intron 45.0%
ACAGTCACTCTACTTTGGGT+TGG - chr3_1:70441185-70441204 Msa0372120:intron 45.0%
! CAGTCACTCTACTTTGGGTT+GGG - chr3_1:70441186-70441205 Msa0372120:intron 45.0%
!! TTGGGTGTTGGATTTGCAGT+GGG - chr3_1:70441204-70441223 Msa0372120:intron 45.0%
! TTGGATTTGCAGTGGGTTTC+TGG - chr3_1:70441211-70441230 Msa0372120:intron 45.0%
!! GTGGGTTTCTGGTGTATTTG+TGG - chr3_1:70441222-70441241 Msa0372120:intron 45.0%
GTGGTTCTCTATTCCTCAAC+AGG - chr3_1:70441241-70441260 Msa0372120:intron 45.0%
! CTTGGAGGCACACTTATTCT+CGG - chr3_1:70441265-70441284 Msa0372120:intron 45.0%
TTTCCAGCTGCATTCTGTCT+TGG + chr3_1:70441599-70441618 None:intergenic 45.0%
CACTAAAACTTGGGGTAGAC+CGG - chr3_1:70441639-70441658 Msa0372120:CDS 45.0%
TGAATAGGACCTTCCTCAAG+TGG - chr3_1:70441684-70441703 Msa0372120:CDS 45.0%
ATAAATGCCGCAACCACTTG+AGG + chr3_1:70441700-70441719 None:intergenic 45.0%
CCGTGTTCAAACAACCAAGC+AGG + chr3_1:70439437-70439456 None:intergenic 50.0%
TCATGTTGCCCTAACCAACC+AGG + chr3_1:70439590-70439609 None:intergenic 50.0%
GTGGCAGAACATAGGGGAAA+TGG + chr3_1:70440218-70440237 None:intergenic 50.0%
CAACCGGGATTTGTCCAACT+AGG + chr3_1:70441023-70441042 None:intergenic 50.0%
CTAGTTGGACAAATCCCGGT+TGG - chr3_1:70441021-70441040 Msa0372120:intron 50.0%
TCCTGCTATGTTGGGAATCC+TGG - chr3_1:70441069-70441088 Msa0372120:intron 50.0%
TCCAGGATTCCCAACATAGC+AGG + chr3_1:70441073-70441092 None:intergenic 50.0%
GTTGGGAATCCTGGACTTTG+TGG - chr3_1:70441078-70441097 Msa0372120:intron 50.0%
GAGTCATACCTAGATGGAGG+AGG - chr3_1:70441126-70441145 Msa0372120:intron 50.0%
!! CTCTACTTTGGGTTGGGTGT+TGG - chr3_1:70441192-70441211 Msa0372120:intron 50.0%
!! GTTGGGTGTTGGATTTGCAG+TGG - chr3_1:70441203-70441222 Msa0372120:intron 50.0%
CTCTATTCCTCAACAGGGCT+TGG - chr3_1:70441247-70441266 Msa0372120:intron 50.0%
TATTCCTCAACAGGGCTTGG+AGG - chr3_1:70441250-70441269 Msa0372120:intron 50.0%
! CCAAGAGGAAAGCATGCTGG+AGG + chr3_1:70438901-70438920 None:intergenic 55.0%
CCTCCAGCATGCTTTCCTCT+TGG - chr3_1:70438898-70438917 Msa0372120:three_prime_UTR 55.0%
! GGACCAAGAGGAAAGCATGC+TGG + chr3_1:70438904-70438923 None:intergenic 55.0%
AGAGGAGCTCCACAAAGTCC+AGG + chr3_1:70441090-70441109 None:intergenic 55.0%
CATTGCGTCCTCCTCCATCT+AGG + chr3_1:70441137-70441156 None:intergenic 55.0%
TATGATTGGTACCACGGCCG+TGG - chr3_1:70441405-70441424 Msa0372120:intron 55.0%
ATGATTGGTACCACGGCCGT+GGG - chr3_1:70441406-70441425 Msa0372120:intron 55.0%
! TTTTGTCAAACCCACGGCCG+TGG + chr3_1:70441419-70441438 None:intergenic 55.0%
GGTCCAAGACAGAATGCAGC+TGG - chr3_1:70441593-70441612 Msa0372120:CDS 55.0%
GGACCTTCCTCAAGTGGTTG+CGG - chr3_1:70441690-70441709 Msa0372120:CDS 55.0%
ATGCCGCAACCACTTGAGGA+AGG + chr3_1:70441696-70441715 None:intergenic 55.0%
TGTGCCTCCAAGCCCTGTTG+AGG + chr3_1:70441257-70441276 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 70438720 70441822 70438720 ID=Msa0372120;Name=Msa0372120
chr3_1 mRNA 70438720 70441822 70438720 ID=Msa0372120-mRNA-1;Parent=Msa0372120;Name=Msa0372120-mRNA-1;_AED=0.32;_eAED=0.32;_QI=12|0.4|0.33|1|0|0|6|199|269
chr3_1 exon 70438720 70438948 70438720 ID=Msa0372120-mRNA-1:exon:15343;Parent=Msa0372120-mRNA-1
chr3_1 exon 70439212 70439319 70439212 ID=Msa0372120-mRNA-1:exon:15342;Parent=Msa0372120-mRNA-1
chr3_1 exon 70439333 70439517 70439333 ID=Msa0372120-mRNA-1:exon:15341;Parent=Msa0372120-mRNA-1
chr3_1 exon 70439548 70439730 70439548 ID=Msa0372120-mRNA-1:exon:15340;Parent=Msa0372120-mRNA-1
chr3_1 exon 70439836 70439892 70439836 ID=Msa0372120-mRNA-1:exon:15339;Parent=Msa0372120-mRNA-1
chr3_1 exon 70441564 70441822 70441564 ID=Msa0372120-mRNA-1:exon:15338;Parent=Msa0372120-mRNA-1
chr3_1 five_prime_UTR 70441811 70441822 70441811 ID=Msa0372120-mRNA-1:five_prime_utr;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70441564 70441810 70441564 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70439836 70439892 70439836 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70439548 70439730 70439548 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70439333 70439517 70439333 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70439212 70439319 70439212 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 CDS 70438919 70438948 70438919 ID=Msa0372120-mRNA-1:cds;Parent=Msa0372120-mRNA-1
chr3_1 three_prime_UTR 70438720 70438918 70438720 ID=Msa0372120-mRNA-1:three_prime_utr;Parent=Msa0372120-mRNA-1
Gene Sequence

>Msa0372120

ATGTTAGGCTTCACTTCACAAATTCCCATTGTTTGGCTACTACTATTATTGATGTCTACAACAATATTTGAAAGGTGCAATAGTAGCAATACGCAGCTTGGTAGTAACTGCAATGAGAAGGATCGTTCTGCATTGCTTCTCTTCAAACTTGGTGTGGAGAATCATTCCTCCAGCATGCTTTCCTCTTGGTCCATTAATGAAAAAAATTGTTGTTCATGGAAAGGAGTTCAATGTGACAACATCACAGGGTCTATTCCCAAATGCATAAGTAACATCACTGGCATGGGAGAAGCAAAGAAAACGAGTGAAATCCCCGCACAAGTTTTCAATCTAGTTCAACTCCAGTCATTGAACTTGACTCGAAATCATTTCACAGGAAAGATATCAAGAGACATCGGAGACATGAAAAACTTGGAATCTCTTGATCTATCCGACAATAAACTTGTTGGAGAAATTCCTGTTACCACGTCAACTTTGTCCTTCTTGATTGGACAAATCCCGGTTGGGACTCAACTTCAAAGTTTTGATGCTTCCTGCTATGTTGGGAATCCTGGACTTTGTGGAGCTCCTCTACCAATATGTGATCATGAGTCATACCTAGATGGAGGAGGACGCAATGATATTGATGATGATGAGAATTCTTTTTCACAGTCACTCTACTTTGGGTTGGGTTGGGTTTCTGGTGTATTTGTGGTTCTCTATTCCTCAACAGGGCTTGGAGGCACACTTATTCTCGGTTCCTTAATCACGTGTTTGTGGTTTTGGGATTTTCCAATTGACGTCCAAGACAGAATGCAGCTGGAAACATAG
Protein sequence

>Msa0372120

MLGFTSQIPIVWLLLLLMSTTIFERCNSSNTQLGSNCNEKDRSALLLFKLGVENHSSSMLSSWSINEKNCCSWKGVQCDNITGSIPKCISNITGMGEAKKTSEIPAQVFNLVQLQSLNLTRNHFTGKISRDIGDMKNLESLDLSDNKLVGEIPVTTSTLSFLIGQIPVGTQLQSFDASCYVGNPGLCGAPLPICDHESYLDGGGRNDIDDDENSFSQSLYFGLGWVSGVFVVLYSSTGLGGTLILGSLITCLWFWDFPIDVQDRMQLET*