Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467850 | XP_003601783.3 | 97.906 | 382 | 7 | 1 | 1 | 382 | 1 | 381 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467850 | sp|Q9FYF9|FB76_ARATH | 70.262 | 343 | 87 | 5 | 34 | 375 | 38 | 366 | 9.86e-172 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467850 | A0A396IXW5 | 97.906 | 382 | 7 | 1 | 1 | 382 | 1 | 381 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0373240 | Msa0467850 | 0.906941 | 8.654084e-81 | -8.615850e-47 |
| Msa0421830 | Msa0467850 | 0.815410 | 9.377081e-52 | -8.615850e-47 |
| Msa0467850 | Msa0514240 | 0.960034 | 4.201860e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467850 | MtrunA17_Chr3g0122491 | 97.906 | 382 | 7 | 1 | 1 | 382 | 1 | 381 | 0.0 | 774 |
| Msa0467850 | MtrunA17_Chr8g0377371 | 70.461 | 369 | 88 | 3 | 1 | 358 | 1 | 359 | 0.0 | 532 |
| Msa0467850 | MtrunA17_Chr3g0132261 | 62.315 | 337 | 112 | 3 | 26 | 360 | 2 | 325 | 1.75e-143 | 411 |
| Msa0467850 | MtrunA17_Chr2g0302201 | 58.934 | 319 | 113 | 4 | 26 | 339 | 2 | 307 | 9.73e-123 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0467850 | AT1G67340.1 | 70.262 | 343 | 87 | 5 | 34 | 375 | 38 | 366 | 1.00e-172 | 486 |
| Msa0467850 | AT5G50450.1 | 56.901 | 355 | 124 | 3 | 23 | 376 | 5 | 331 | 5.12e-138 | 397 |
Find 102 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGTGCTGGTTCTGTTTC+TGG | 0.053970 | 3_3:-69298417 | Msa0467850:CDS |
| TGTCCTTTGCTGAGTGATTT+TGG | 0.190426 | 3_3:-69298387 | Msa0467850:CDS |
| GATATTCGAGGCGGGTTTCC+TGG | 0.252033 | 3_3:-69298306 | Msa0467850:CDS |
| ATGAGGTTATGTTCGAATTC+TGG | 0.259191 | 3_3:-69298276 | Msa0467850:CDS |
| AGGATAACACAAACCTCTTC+TGG | 0.297325 | 3_3:+69299383 | None:intergenic |
| GCTGGTTCTGTTTCTGGTTC+GGG | 0.299737 | 3_3:-69298411 | Msa0467850:CDS |
| TACCATTCCAAGAGTGTAAC+AGG | 0.304317 | 3_3:+69298939 | None:intergenic |
| AGGAAGCGGCGCGTCGTTAA+TGG | 0.308133 | 3_3:-69298784 | Msa0467850:CDS |
| TGCTGGTTCTGTTTCTGGTT+CGG | 0.313707 | 3_3:-69298412 | Msa0467850:CDS |
| TGGTTGTAACGTTCCGGTTC+AGG | 0.315466 | 3_3:-69298367 | Msa0467850:CDS |
| AAAGTACTACTATTGGTAAA+AGG | 0.362709 | 3_3:+69297855 | None:intergenic |
| TGTGCACGCGCTGCATTTCT+CGG | 0.363700 | 3_3:-69298648 | Msa0467850:CDS |
| CGCGCCGTCTTTGTATTCAT+TGG | 0.368841 | 3_3:-69298739 | Msa0467850:CDS |
| GCGCTTGTCAAGCGCTTGAT+TGG | 0.371030 | 3_3:-69298179 | Msa0467850:CDS |
| CTCAAACGCTGTGTTGATGC+TGG | 0.395843 | 3_3:-69298973 | Msa0467850:CDS |
| AACTCATGTTTCCTTGTCTC+AGG | 0.404750 | 3_3:+69298243 | None:intergenic |
| ACGGTAACGGAAGATTGTTT+TGG | 0.408205 | 3_3:-69298002 | Msa0467850:three_prime_UTR |
| ATTGAAGCCTGTTACACTCT+TGG | 0.412205 | 3_3:-69298946 | Msa0467850:CDS |
| TTTGATAGTTGAAGTGTTTG+AGG | 0.425616 | 3_3:+69299363 | None:intergenic |
| CATTGTTTACAAGACGGTTA+CGG | 0.429974 | 3_3:-69298597 | Msa0467850:CDS |
| AACAGATGCAAAAGACTAAA+CGG | 0.431674 | 3_3:-69299087 | Msa0467850:intron |
| CAACACAGCGTTTGAGAAAA+CGG | 0.444420 | 3_3:+69298980 | None:intergenic |
| GGTTTCCTGGACCGGGTATG+AGG | 0.445338 | 3_3:-69298293 | Msa0467850:CDS |
| ACATGAGTTTCGAAGATGTT+CGG | 0.448702 | 3_3:-69298229 | Msa0467850:CDS |
| GAGGAGGAGGAACATGTTGC+CGG | 0.452656 | 3_3:-69298111 | Msa0467850:CDS |
| GCTGACGTGGAGTGTTAACC+CGG | 0.456764 | 3_3:-69298472 | Msa0467850:CDS |
| GCCAGTGGAGAGGTGGTTAG+AGG | 0.457892 | 3_3:-69298130 | Msa0467850:CDS |
| GTTATTGCCGTTAGATAAAA+CGG | 0.459886 | 3_3:+69298509 | None:intergenic |
| GCTGGGTGAGTCTCCTGAAC+CGG | 0.464172 | 3_3:+69298354 | None:intergenic |
| TTGGCAGTGATTCAGTTCAA+TGG | 0.465205 | 3_3:-69298720 | Msa0467850:CDS |
| GGAGAGGTGGTTAGAGGAGG+AGG | 0.467062 | 3_3:-69298124 | Msa0467850:CDS |
| GGTTGTGCTTGATAGCTGAT+AGG | 0.470550 | 3_3:-69298055 | Msa0467850:exon |
| TTTCGAAGATGTTCGGTTTG+TGG | 0.474837 | 3_3:-69298222 | Msa0467850:CDS |
| AGGAGACTCACCCAGCGAAC+CGG | 0.480282 | 3_3:-69298347 | Msa0467850:CDS |
| ATAGAGAGAACTATATCATC+AGG | 0.482596 | 3_3:+69299261 | None:intergenic |
| TCCTCTAACCACCTCTCCAC+TGG | 0.483960 | 3_3:+69298129 | None:intergenic |
| TCTGTCATAAACCGGTTCGC+TGG | 0.484829 | 3_3:+69298336 | None:intergenic |
| TCGAGGCGGGTTTCCTGGAC+CGG | 0.486003 | 3_3:-69298301 | Msa0467850:CDS |
| GATATAGTTCTCTCTATACT+TGG | 0.489280 | 3_3:-69299255 | Msa0467850:CDS |
| AACACCACCGTCACCTTCAC+CGG | 0.490736 | 3_3:+69298092 | None:intergenic |
| TAATAGATAGATGATAAAGA+AGG | 0.492994 | 3_3:+69299415 | None:intergenic |
| GAAGGGTAAAAGCATAGAGA+GGG | 0.495464 | 3_3:+69299433 | None:intergenic |
| GTGATTCAGTTCAATGGAAG+TGG | 0.496025 | 3_3:-69298714 | Msa0467850:CDS |
| CGAACCACTCTGTCATAAAC+CGG | 0.496784 | 3_3:+69298328 | None:intergenic |
| CAAGGCGGAGTGTGCGCCAG+TGG | 0.498772 | 3_3:-69298145 | Msa0467850:CDS |
| AATAGATAGATGATAAAGAA+GGG | 0.516305 | 3_3:+69299416 | None:intergenic |
| TGAGGTGGTTGGTTTGAACC+CGG | 0.521097 | 3_3:+69298453 | None:intergenic |
| CTGTCATAAACCGGTTCGCT+GGG | 0.523247 | 3_3:+69298337 | None:intergenic |
| ATTATTATGCGAACCAGAAG+AGG | 0.526910 | 3_3:-69299396 | Msa0467850:exon |
| ACAAACAACCGTTGCTGACG+TGG | 0.529455 | 3_3:-69298485 | Msa0467850:CDS |
| GTTCGAATTCTGGTTGTGGA+AGG | 0.530016 | 3_3:-69298266 | Msa0467850:CDS |
| AATGTTAACGGTGACGGTAA+CGG | 0.530413 | 3_3:-69298015 | Msa0467850:three_prime_UTR |
| TGATTGGAAGTTTCGACACA+AGG | 0.534148 | 3_3:-69298163 | Msa0467850:CDS |
| AGAAGGGTAAAAGCATAGAG+AGG | 0.538553 | 3_3:+69299432 | None:intergenic |
| TGTTTGCAAAACAGAGGAAG+CGG | 0.541749 | 3_3:-69298798 | Msa0467850:CDS |
| TTTCAAAATGTTAACGGTGA+CGG | 0.543665 | 3_3:-69298021 | Msa0467850:three_prime_UTR |
| AGAGGAGACCACACTACCAT+TGG | 0.543834 | 3_3:+69297881 | None:intergenic |
| TTATGTTCGAATTCTGGTTG+TGG | 0.545212 | 3_3:-69298270 | Msa0467850:CDS |
| TATTGTCTCATTTATTACTG+TGG | 0.546729 | 3_3:-69297928 | Msa0467850:three_prime_UTR |
| GAGGAACATGTTGCCGGTGA+AGG | 0.549146 | 3_3:-69298105 | Msa0467850:CDS |
| AAAATCTGAAGGAGAATTTG+CGG | 0.550795 | 3_3:+69299218 | None:intergenic |
| ACAGAGTGGTTCGATATTCG+AGG | 0.559726 | 3_3:-69298318 | Msa0467850:CDS |
| CATAACCTCATACCCGGTCC+AGG | 0.560065 | 3_3:+69298288 | None:intergenic |
| GCATTTCTCGGTCACATCGA+CGG | 0.562721 | 3_3:-69298636 | Msa0467850:CDS |
| CGAGGCGGGTTTCCTGGACC+GGG | 0.564242 | 3_3:-69298300 | Msa0467850:CDS |
| GTTAAACAGAACGTTATTGA+AGG | 0.570072 | 3_3:-69298573 | Msa0467850:CDS |
| CGGAGTGTGCGCCAGTGGAG+AGG | 0.575589 | 3_3:-69298140 | Msa0467850:CDS |
| ATCGACGGTTTACGTGAGCT+TGG | 0.585324 | 3_3:-69298621 | Msa0467850:CDS |
| GAGGTGGTTGGTTTGAACCC+GGG | 0.585702 | 3_3:+69298454 | None:intergenic |
| AGTGTGCGCCAGTGGAGAGG+TGG | 0.586560 | 3_3:-69298137 | Msa0467850:CDS |
| AATGCAATTGCAAAGTCCAA+TGG | 0.595187 | 3_3:-69297897 | Msa0467850:three_prime_UTR |
| AAACACGAAGCTGAGGTGGT+TGG | 0.595586 | 3_3:+69298442 | None:intergenic |
| CTTGGTCATTGTTTACAAGA+CGG | 0.596462 | 3_3:-69298603 | Msa0467850:CDS |
| AGCCTGTTACACTCTTGGAA+TGG | 0.601007 | 3_3:-69298941 | Msa0467850:intron |
| AGAACACTGATAAAATCTGA+AGG | 0.607669 | 3_3:+69299207 | None:intergenic |
| CAAAGACTTACGCGCCGGTG+TGG | 0.610989 | 3_3:-69298676 | Msa0467850:CDS |
| TGCAAAGTCCAATGGTAGTG+TGG | 0.612273 | 3_3:-69297889 | Msa0467850:three_prime_UTR |
| ATTCAGTTCAATGGAAGTGG+AGG | 0.623225 | 3_3:-69298711 | Msa0467850:CDS |
| AGTGGTTCGATATTCGAGGC+GGG | 0.623347 | 3_3:-69298314 | Msa0467850:CDS |
| TGGCATTGGATACTGAAACA+TGG | 0.624235 | 3_3:-69297967 | Msa0467850:three_prime_UTR |
| GCTAAAACACGAAGCTGAGG+TGG | 0.627721 | 3_3:+69298438 | None:intergenic |
| AAGGGTAAAAGCATAGAGAG+GGG | 0.628555 | 3_3:+69299434 | None:intergenic |
| TTAACACTCCACGTCAGCAA+CGG | 0.629849 | 3_3:+69298477 | None:intergenic |
| AGAACGTTATTGAAGGTCGA+CGG | 0.630802 | 3_3:-69298566 | Msa0467850:CDS |
| GTTGTGGAAGGCCTGAGACA+AGG | 0.631392 | 3_3:-69298254 | Msa0467850:CDS |
| AGTGGAGAGGTGGTTAGAGG+AGG | 0.634916 | 3_3:-69298127 | Msa0467850:CDS |
| CAACCAAAATCACTCAGCAA+AGG | 0.637304 | 3_3:+69298384 | None:intergenic |
| CATGTTGCCGGTGAAGGTGA+CGG | 0.641096 | 3_3:-69298099 | Msa0467850:CDS |
| CCAGCTAAAACACGAAGCTG+AGG | 0.643105 | 3_3:+69298435 | None:intergenic |
| TTCGAACATAACCTCATACC+CGG | 0.646462 | 3_3:+69298282 | None:intergenic |
| GCGTGCACATAAAGCCACAC+CGG | 0.649753 | 3_3:+69298662 | None:intergenic |
| AACGACAAAGACTTACGCGC+CGG | 0.652915 | 3_3:-69298681 | Msa0467850:CDS |
| ATCTGAAGGAGAATTTGCGG+TGG | 0.661673 | 3_3:+69299221 | None:intergenic |
| TGGTGTTAACATTGATGAGG+TGG | 0.662483 | 3_3:-69298076 | Msa0467850:CDS |
| CTGACGTGGAGTGTTAACCC+GGG | 0.664204 | 3_3:-69298471 | Msa0467850:CDS |
| ACTATTGGTAAAAGGAACAG+AGG | 0.675720 | 3_3:+69297863 | None:intergenic |
| CGGTGGTGTTAACATTGATG+AGG | 0.680359 | 3_3:-69298079 | Msa0467850:CDS |
| ACTGCCAATGAATACAAAGA+CGG | 0.680538 | 3_3:+69298735 | None:intergenic |
| TTGGAAGTTTCGACACAAGG+CGG | 0.683789 | 3_3:-69298160 | Msa0467850:CDS |
| CGAACCGGTTTATGACAGAG+TGG | 0.697357 | 3_3:-69298332 | Msa0467850:CDS |
| GAGTGGTTCGATATTCGAGG+CGG | 0.698332 | 3_3:-69298315 | Msa0467850:CDS |
| GTTGCCGGTGAAGGTGACGG+TGG | 0.699219 | 3_3:-69298096 | Msa0467850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTCAAAATGTTAA+CGG | - | chr3_3:69299206-69299225 | Msa0467850:CDS | 10.0% |
| !!! | ATTATTTTTCAAAATGTTAA+CGG | - | chr3_3:69299206-69299225 | Msa0467850:CDS | 10.0% |
| !!! | AAAATTTCTAATTTTTTGAG+TGG | + | chr3_3:69298321-69298340 | None:intergenic | 15.0% |
| !!! | AAAATTTCTAATTTTTTGAG+TGG | + | chr3_3:69298321-69298340 | None:intergenic | 15.0% |
| !! | AATAGATAGATGATAAAGAA+GGG | + | chr3_3:69297820-69297839 | None:intergenic | 20.0% |
| !! | TAATAGATAGATGATAAAGA+AGG | + | chr3_3:69297821-69297840 | None:intergenic | 20.0% |
| !! | AATAGATAGATGATAAAGAA+GGG | + | chr3_3:69297820-69297839 | None:intergenic | 20.0% |
| !! | TAATAGATAGATGATAAAGA+AGG | + | chr3_3:69297821-69297840 | None:intergenic | 20.0% |
| !! | TTTTATTGTTTGCAAAACAG+AGG | - | chr3_3:69298429-69298448 | Msa0467850:CDS | 25.0% |
| !!! | TGTTTTGGAACTGTATTTTT+TGG | - | chr3_3:69299246-69299265 | Msa0467850:CDS | 25.0% |
| ! | TATTGTCTCATTTATTACTG+TGG | - | chr3_3:69299305-69299324 | Msa0467850:CDS | 25.0% |
| !! | AAAGTACTACTATTGGTAAA+AGG | + | chr3_3:69299381-69299400 | None:intergenic | 25.0% |
| !!! | ACGTAAAAAAGTACTACTAT+TGG | + | chr3_3:69299388-69299407 | None:intergenic | 25.0% |
| !! | TTTTATTGTTTGCAAAACAG+AGG | - | chr3_3:69298429-69298448 | Msa0467850:CDS | 25.0% |
| !!! | TGTTTTGGAACTGTATTTTT+TGG | - | chr3_3:69299246-69299265 | Msa0467850:CDS | 25.0% |
| ! | TATTGTCTCATTTATTACTG+TGG | - | chr3_3:69299305-69299324 | Msa0467850:CDS | 25.0% |
| !! | AAAGTACTACTATTGGTAAA+AGG | + | chr3_3:69299381-69299400 | None:intergenic | 25.0% |
| !!! | ACGTAAAAAAGTACTACTAT+TGG | + | chr3_3:69299388-69299407 | None:intergenic | 25.0% |
| ! | TTTGATAGTTGAAGTGTTTG+AGG | + | chr3_3:69297873-69297892 | None:intergenic | 30.0% |
| !!! | AAATCATGAGAAGTGTTTTG+TGG | + | chr3_3:69297939-69297958 | None:intergenic | 30.0% |
| ATAGAGAGAACTATATCATC+AGG | + | chr3_3:69297975-69297994 | None:intergenic | 30.0% | |
| GATATAGTTCTCTCTATACT+TGG | - | chr3_3:69297978-69297997 | Msa0467850:three_prime_UTR | 30.0% | |
| AAAATCTGAAGGAGAATTTG+CGG | + | chr3_3:69298018-69298037 | None:intergenic | 30.0% | |
| AGAACACTGATAAAATCTGA+AGG | + | chr3_3:69298029-69298048 | None:intergenic | 30.0% | |
| AACAGATGCAAAAGACTAAA+CGG | - | chr3_3:69298146-69298165 | Msa0467850:CDS | 30.0% | |
| !! | TAATGTTTTGTTCGAAGCTT+TGG | + | chr3_3:69298198-69298217 | None:intergenic | 30.0% |
| TATCAGTCAAACCTAAAAAC+TGG | - | chr3_3:69298216-69298235 | Msa0467850:CDS | 30.0% | |
| GTTAAACAGAACGTTATTGA+AGG | - | chr3_3:69298660-69298679 | Msa0467850:CDS | 30.0% | |
| GTTATTGCCGTTAGATAAAA+CGG | + | chr3_3:69298727-69298746 | None:intergenic | 30.0% | |
| TTTCAAAATGTTAACGGTGA+CGG | - | chr3_3:69299212-69299231 | Msa0467850:CDS | 30.0% | |
| ! | TTTGATAGTTGAAGTGTTTG+AGG | + | chr3_3:69297873-69297892 | None:intergenic | 30.0% |
| !!! | AAATCATGAGAAGTGTTTTG+TGG | + | chr3_3:69297939-69297958 | None:intergenic | 30.0% |
| ATAGAGAGAACTATATCATC+AGG | + | chr3_3:69297975-69297994 | None:intergenic | 30.0% | |
| GATATAGTTCTCTCTATACT+TGG | - | chr3_3:69297978-69297997 | Msa0467850:three_prime_UTR | 30.0% | |
| AAAATCTGAAGGAGAATTTG+CGG | + | chr3_3:69298018-69298037 | None:intergenic | 30.0% | |
| AGAACACTGATAAAATCTGA+AGG | + | chr3_3:69298029-69298048 | None:intergenic | 30.0% | |
| AACAGATGCAAAAGACTAAA+CGG | - | chr3_3:69298146-69298165 | Msa0467850:CDS | 30.0% | |
| !! | TAATGTTTTGTTCGAAGCTT+TGG | + | chr3_3:69298198-69298217 | None:intergenic | 30.0% |
| TATCAGTCAAACCTAAAAAC+TGG | - | chr3_3:69298216-69298235 | Msa0467850:CDS | 30.0% | |
| GTTAAACAGAACGTTATTGA+AGG | - | chr3_3:69298660-69298679 | Msa0467850:CDS | 30.0% | |
| GTTATTGCCGTTAGATAAAA+CGG | + | chr3_3:69298727-69298746 | None:intergenic | 30.0% | |
| TTTCAAAATGTTAACGGTGA+CGG | - | chr3_3:69299212-69299231 | Msa0467850:CDS | 30.0% | |
| ATTATTATGCGAACCAGAAG+AGG | - | chr3_3:69297837-69297856 | Msa0467850:three_prime_UTR | 35.0% | |
| ACTGCCAATGAATACAAAGA+CGG | + | chr3_3:69298501-69298520 | None:intergenic | 35.0% | |
| CTTGGTCATTGTTTACAAGA+CGG | - | chr3_3:69298630-69298649 | Msa0467850:CDS | 35.0% | |
| CATTGTTTACAAGACGGTTA+CGG | - | chr3_3:69298636-69298655 | Msa0467850:CDS | 35.0% | |
| !!! | TGATTTTGGTTGTAACGTTC+CGG | - | chr3_3:69298860-69298879 | Msa0467850:intron | 35.0% |
| ATGAGGTTATGTTCGAATTC+TGG | - | chr3_3:69298957-69298976 | Msa0467850:CDS | 35.0% | |
| ! | TTATGTTCGAATTCTGGTTG+TGG | - | chr3_3:69298963-69298982 | Msa0467850:CDS | 35.0% |
| ACATGAGTTTCGAAGATGTT+CGG | - | chr3_3:69299004-69299023 | Msa0467850:CDS | 35.0% | |
| !!! | GGAACTGTATTTTTTGGCAT+TGG | - | chr3_3:69299252-69299271 | Msa0467850:CDS | 35.0% |
| AATGCAATTGCAAAGTCCAA+TGG | - | chr3_3:69299336-69299355 | Msa0467850:CDS | 35.0% | |
| ACTATTGGTAAAAGGAACAG+AGG | + | chr3_3:69299373-69299392 | None:intergenic | 35.0% | |
| ATTATTATGCGAACCAGAAG+AGG | - | chr3_3:69297837-69297856 | Msa0467850:three_prime_UTR | 35.0% | |
| ACTGCCAATGAATACAAAGA+CGG | + | chr3_3:69298501-69298520 | None:intergenic | 35.0% | |
| CTTGGTCATTGTTTACAAGA+CGG | - | chr3_3:69298630-69298649 | Msa0467850:CDS | 35.0% | |
| CATTGTTTACAAGACGGTTA+CGG | - | chr3_3:69298636-69298655 | Msa0467850:CDS | 35.0% | |
| !!! | TGATTTTGGTTGTAACGTTC+CGG | - | chr3_3:69298860-69298879 | Msa0467850:intron | 35.0% |
| ATGAGGTTATGTTCGAATTC+TGG | - | chr3_3:69298957-69298976 | Msa0467850:CDS | 35.0% | |
| ! | TTATGTTCGAATTCTGGTTG+TGG | - | chr3_3:69298963-69298982 | Msa0467850:CDS | 35.0% |
| ACATGAGTTTCGAAGATGTT+CGG | - | chr3_3:69299004-69299023 | Msa0467850:CDS | 35.0% | |
| !!! | GGAACTGTATTTTTTGGCAT+TGG | - | chr3_3:69299252-69299271 | Msa0467850:CDS | 35.0% |
| AATGCAATTGCAAAGTCCAA+TGG | - | chr3_3:69299336-69299355 | Msa0467850:CDS | 35.0% | |
| ACTATTGGTAAAAGGAACAG+AGG | + | chr3_3:69299373-69299392 | None:intergenic | 35.0% | |
| ! | AAGGGTAAAAGCATAGAGAG+GGG | + | chr3_3:69297802-69297821 | None:intergenic | 40.0% |
| ! | GAAGGGTAAAAGCATAGAGA+GGG | + | chr3_3:69297803-69297822 | None:intergenic | 40.0% |
| ! | AGAAGGGTAAAAGCATAGAG+AGG | + | chr3_3:69297804-69297823 | None:intergenic | 40.0% |
| AGGATAACACAAACCTCTTC+TGG | + | chr3_3:69297853-69297872 | None:intergenic | 40.0% | |
| CAACACAGCGTTTGAGAAAA+CGG | + | chr3_3:69298256-69298275 | None:intergenic | 40.0% | |
| ATTGAAGCCTGTTACACTCT+TGG | - | chr3_3:69298287-69298306 | Msa0467850:CDS | 40.0% | |
| ! | TACCATTCCAAGAGTGTAAC+AGG | + | chr3_3:69298297-69298316 | None:intergenic | 40.0% |
| TGTTTGCAAAACAGAGGAAG+CGG | - | chr3_3:69298435-69298454 | Msa0467850:CDS | 40.0% | |
| TTGGCAGTGATTCAGTTCAA+TGG | - | chr3_3:69298513-69298532 | Msa0467850:CDS | 40.0% | |
| GTGATTCAGTTCAATGGAAG+TGG | - | chr3_3:69298519-69298538 | Msa0467850:CDS | 40.0% | |
| ATTCAGTTCAATGGAAGTGG+AGG | - | chr3_3:69298522-69298541 | Msa0467850:CDS | 40.0% | |
| AGAACGTTATTGAAGGTCGA+CGG | - | chr3_3:69298667-69298686 | Msa0467850:CDS | 40.0% | |
| ! | TGTCCTTTGCTGAGTGATTT+TGG | - | chr3_3:69298846-69298865 | Msa0467850:intron | 40.0% |
| CAACCAAAATCACTCAGCAA+AGG | + | chr3_3:69298852-69298871 | None:intergenic | 40.0% | |
| TTCGAACATAACCTCATACC+CGG | + | chr3_3:69298954-69298973 | None:intergenic | 40.0% | |
| AACTCATGTTTCCTTGTCTC+AGG | + | chr3_3:69298993-69299012 | None:intergenic | 40.0% | |
| ! | TTTCGAAGATGTTCGGTTTG+TGG | - | chr3_3:69299011-69299030 | Msa0467850:CDS | 40.0% |
| TGATTGGAAGTTTCGACACA+AGG | - | chr3_3:69299070-69299089 | Msa0467850:CDS | 40.0% | |
| ! | TGGTGTTAACATTGATGAGG+TGG | - | chr3_3:69299157-69299176 | Msa0467850:intron | 40.0% |
| ! | AATGTTAACGGTGACGGTAA+CGG | - | chr3_3:69299218-69299237 | Msa0467850:CDS | 40.0% |
| !!! | ACGGTAACGGAAGATTGTTT+TGG | - | chr3_3:69299231-69299250 | Msa0467850:CDS | 40.0% |
| ! | TGGCATTGGATACTGAAACA+TGG | - | chr3_3:69299266-69299285 | Msa0467850:CDS | 40.0% |
| ! | AAGGGTAAAAGCATAGAGAG+GGG | + | chr3_3:69297802-69297821 | None:intergenic | 40.0% |
| ! | GAAGGGTAAAAGCATAGAGA+GGG | + | chr3_3:69297803-69297822 | None:intergenic | 40.0% |
| ! | AGAAGGGTAAAAGCATAGAG+AGG | + | chr3_3:69297804-69297823 | None:intergenic | 40.0% |
| AGGATAACACAAACCTCTTC+TGG | + | chr3_3:69297853-69297872 | None:intergenic | 40.0% | |
| CAACACAGCGTTTGAGAAAA+CGG | + | chr3_3:69298256-69298275 | None:intergenic | 40.0% | |
| ATTGAAGCCTGTTACACTCT+TGG | - | chr3_3:69298287-69298306 | Msa0467850:CDS | 40.0% | |
| ! | TACCATTCCAAGAGTGTAAC+AGG | + | chr3_3:69298297-69298316 | None:intergenic | 40.0% |
| TGTTTGCAAAACAGAGGAAG+CGG | - | chr3_3:69298435-69298454 | Msa0467850:CDS | 40.0% | |
| TTGGCAGTGATTCAGTTCAA+TGG | - | chr3_3:69298513-69298532 | Msa0467850:CDS | 40.0% | |
| GTGATTCAGTTCAATGGAAG+TGG | - | chr3_3:69298519-69298538 | Msa0467850:CDS | 40.0% | |
| ATTCAGTTCAATGGAAGTGG+AGG | - | chr3_3:69298522-69298541 | Msa0467850:CDS | 40.0% | |
| AGAACGTTATTGAAGGTCGA+CGG | - | chr3_3:69298667-69298686 | Msa0467850:CDS | 40.0% | |
| ! | TGTCCTTTGCTGAGTGATTT+TGG | - | chr3_3:69298846-69298865 | Msa0467850:intron | 40.0% |
| CAACCAAAATCACTCAGCAA+AGG | + | chr3_3:69298852-69298871 | None:intergenic | 40.0% | |
| TTCGAACATAACCTCATACC+CGG | + | chr3_3:69298954-69298973 | None:intergenic | 40.0% | |
| AACTCATGTTTCCTTGTCTC+AGG | + | chr3_3:69298993-69299012 | None:intergenic | 40.0% | |
| ! | TTTCGAAGATGTTCGGTTTG+TGG | - | chr3_3:69299011-69299030 | Msa0467850:CDS | 40.0% |
| TGATTGGAAGTTTCGACACA+AGG | - | chr3_3:69299070-69299089 | Msa0467850:CDS | 40.0% | |
| ! | TGGTGTTAACATTGATGAGG+TGG | - | chr3_3:69299157-69299176 | Msa0467850:intron | 40.0% |
| ! | AATGTTAACGGTGACGGTAA+CGG | - | chr3_3:69299218-69299237 | Msa0467850:CDS | 40.0% |
| !!! | ACGGTAACGGAAGATTGTTT+TGG | - | chr3_3:69299231-69299250 | Msa0467850:CDS | 40.0% |
| ! | TGGCATTGGATACTGAAACA+TGG | - | chr3_3:69299266-69299285 | Msa0467850:CDS | 40.0% |
| ATCTGAAGGAGAATTTGCGG+TGG | + | chr3_3:69298015-69298034 | None:intergenic | 45.0% | |
| ! | GCAGAGTCACACCAGTTTTT+AGG | + | chr3_3:69298230-69298249 | None:intergenic | 45.0% |
| AGCCTGTTACACTCTTGGAA+TGG | - | chr3_3:69298292-69298311 | Msa0467850:CDS | 45.0% | |
| TTGTCGTGTGTCTGCAGATT+CGG | - | chr3_3:69298406-69298425 | Msa0467850:CDS | 45.0% | |
| !!! | CTCGCTGCCGTTTTATCTAA+CGG | - | chr3_3:69298717-69298736 | Msa0467850:CDS | 45.0% |
| TTAACACTCCACGTCAGCAA+CGG | + | chr3_3:69298759-69298778 | None:intergenic | 45.0% | |
| !! | TGCTGGTTCTGTTTCTGGTT+CGG | - | chr3_3:69298821-69298840 | Msa0467850:intron | 45.0% |
| CGAACCACTCTGTCATAAAC+CGG | + | chr3_3:69298908-69298927 | None:intergenic | 45.0% | |
| ACAGAGTGGTTCGATATTCG+AGG | - | chr3_3:69298915-69298934 | Msa0467850:intron | 45.0% | |
| ! | GTTCGAATTCTGGTTGTGGA+AGG | - | chr3_3:69298967-69298986 | Msa0467850:CDS | 45.0% |
| TTGGAAGTTTCGACACAAGG+CGG | - | chr3_3:69299073-69299092 | Msa0467850:CDS | 45.0% | |
| ! | CGGTGGTGTTAACATTGATG+AGG | - | chr3_3:69299154-69299173 | Msa0467850:intron | 45.0% |
| ! | GGTTGTGCTTGATAGCTGAT+AGG | - | chr3_3:69299178-69299197 | Msa0467850:intron | 45.0% |
| ! | TGCAAAGTCCAATGGTAGTG+TGG | - | chr3_3:69299344-69299363 | Msa0467850:CDS | 45.0% |
| ATCTGAAGGAGAATTTGCGG+TGG | + | chr3_3:69298015-69298034 | None:intergenic | 45.0% | |
| ! | GCAGAGTCACACCAGTTTTT+AGG | + | chr3_3:69298230-69298249 | None:intergenic | 45.0% |
| AGCCTGTTACACTCTTGGAA+TGG | - | chr3_3:69298292-69298311 | Msa0467850:CDS | 45.0% | |
| TTGTCGTGTGTCTGCAGATT+CGG | - | chr3_3:69298406-69298425 | Msa0467850:CDS | 45.0% | |
| !!! | CTCGCTGCCGTTTTATCTAA+CGG | - | chr3_3:69298717-69298736 | Msa0467850:CDS | 45.0% |
| TTAACACTCCACGTCAGCAA+CGG | + | chr3_3:69298759-69298778 | None:intergenic | 45.0% | |
| !! | TGCTGGTTCTGTTTCTGGTT+CGG | - | chr3_3:69298821-69298840 | Msa0467850:intron | 45.0% |
| CGAACCACTCTGTCATAAAC+CGG | + | chr3_3:69298908-69298927 | None:intergenic | 45.0% | |
| ACAGAGTGGTTCGATATTCG+AGG | - | chr3_3:69298915-69298934 | Msa0467850:intron | 45.0% | |
| ! | GTTCGAATTCTGGTTGTGGA+AGG | - | chr3_3:69298967-69298986 | Msa0467850:CDS | 45.0% |
| TTGGAAGTTTCGACACAAGG+CGG | - | chr3_3:69299073-69299092 | Msa0467850:CDS | 45.0% | |
| ! | CGGTGGTGTTAACATTGATG+AGG | - | chr3_3:69299154-69299173 | Msa0467850:intron | 45.0% |
| ! | GGTTGTGCTTGATAGCTGAT+AGG | - | chr3_3:69299178-69299197 | Msa0467850:intron | 45.0% |
| ! | TGCAAAGTCCAATGGTAGTG+TGG | - | chr3_3:69299344-69299363 | Msa0467850:CDS | 45.0% |
| ! | CTCAAACGCTGTGTTGATGC+TGG | - | chr3_3:69298260-69298279 | Msa0467850:CDS | 50.0% |
| CGCGCCGTCTTTGTATTCAT+TGG | - | chr3_3:69298494-69298513 | Msa0467850:CDS | 50.0% | |
| AACGACAAAGACTTACGCGC+CGG | - | chr3_3:69298552-69298571 | Msa0467850:CDS | 50.0% | |
| GCATTTCTCGGTCACATCGA+CGG | - | chr3_3:69298597-69298616 | Msa0467850:CDS | 50.0% | |
| ATCGACGGTTTACGTGAGCT+TGG | - | chr3_3:69298612-69298631 | Msa0467850:CDS | 50.0% | |
| ACAAACAACCGTTGCTGACG+TGG | - | chr3_3:69298748-69298767 | Msa0467850:CDS | 50.0% | |
| !! | TGAGGTGGTTGGTTTGAACC+CGG | + | chr3_3:69298783-69298802 | None:intergenic | 50.0% |
| AAACACGAAGCTGAGGTGGT+TGG | + | chr3_3:69298794-69298813 | None:intergenic | 50.0% | |
| GCTAAAACACGAAGCTGAGG+TGG | + | chr3_3:69298798-69298817 | None:intergenic | 50.0% | |
| CCAGCTAAAACACGAAGCTG+AGG | + | chr3_3:69298801-69298820 | None:intergenic | 50.0% | |
| !!! | CCTCAGCTTCGTGTTTTAGC+TGG | - | chr3_3:69298798-69298817 | Msa0467850:CDS | 50.0% |
| !!! | CTTCGTGTTTTAGCTGGTGC+TGG | - | chr3_3:69298804-69298823 | Msa0467850:CDS | 50.0% |
| !! | GCTGGTTCTGTTTCTGGTTC+GGG | - | chr3_3:69298822-69298841 | Msa0467850:intron | 50.0% |
| TGGTTGTAACGTTCCGGTTC+AGG | - | chr3_3:69298866-69298885 | Msa0467850:intron | 50.0% | |
| !! | CTGTCATAAACCGGTTCGCT+GGG | + | chr3_3:69298899-69298918 | None:intergenic | 50.0% |
| !! | TCTGTCATAAACCGGTTCGC+TGG | + | chr3_3:69298900-69298919 | None:intergenic | 50.0% |
| ! | CGAACCGGTTTATGACAGAG+TGG | - | chr3_3:69298901-69298920 | Msa0467850:intron | 50.0% |
| GAGTGGTTCGATATTCGAGG+CGG | - | chr3_3:69298918-69298937 | Msa0467850:intron | 50.0% | |
| AGTGGTTCGATATTCGAGGC+GGG | - | chr3_3:69298919-69298938 | Msa0467850:intron | 50.0% | |
| AGAGGAGACCACACTACCAT+TGG | + | chr3_3:69299355-69299374 | None:intergenic | 50.0% | |
| ! | CTCAAACGCTGTGTTGATGC+TGG | - | chr3_3:69298260-69298279 | Msa0467850:CDS | 50.0% |
| CGCGCCGTCTTTGTATTCAT+TGG | - | chr3_3:69298494-69298513 | Msa0467850:CDS | 50.0% | |
| AACGACAAAGACTTACGCGC+CGG | - | chr3_3:69298552-69298571 | Msa0467850:CDS | 50.0% | |
| GCATTTCTCGGTCACATCGA+CGG | - | chr3_3:69298597-69298616 | Msa0467850:CDS | 50.0% | |
| ATCGACGGTTTACGTGAGCT+TGG | - | chr3_3:69298612-69298631 | Msa0467850:CDS | 50.0% | |
| ACAAACAACCGTTGCTGACG+TGG | - | chr3_3:69298748-69298767 | Msa0467850:CDS | 50.0% | |
| !! | TGAGGTGGTTGGTTTGAACC+CGG | + | chr3_3:69298783-69298802 | None:intergenic | 50.0% |
| AAACACGAAGCTGAGGTGGT+TGG | + | chr3_3:69298794-69298813 | None:intergenic | 50.0% | |
| GCTAAAACACGAAGCTGAGG+TGG | + | chr3_3:69298798-69298817 | None:intergenic | 50.0% | |
| CCAGCTAAAACACGAAGCTG+AGG | + | chr3_3:69298801-69298820 | None:intergenic | 50.0% | |
| !!! | CCTCAGCTTCGTGTTTTAGC+TGG | - | chr3_3:69298798-69298817 | Msa0467850:CDS | 50.0% |
| !!! | CTTCGTGTTTTAGCTGGTGC+TGG | - | chr3_3:69298804-69298823 | Msa0467850:CDS | 50.0% |
| !! | GCTGGTTCTGTTTCTGGTTC+GGG | - | chr3_3:69298822-69298841 | Msa0467850:intron | 50.0% |
| TGGTTGTAACGTTCCGGTTC+AGG | - | chr3_3:69298866-69298885 | Msa0467850:intron | 50.0% | |
| !! | CTGTCATAAACCGGTTCGCT+GGG | + | chr3_3:69298899-69298918 | None:intergenic | 50.0% |
| !! | TCTGTCATAAACCGGTTCGC+TGG | + | chr3_3:69298900-69298919 | None:intergenic | 50.0% |
| ! | CGAACCGGTTTATGACAGAG+TGG | - | chr3_3:69298901-69298920 | Msa0467850:intron | 50.0% |
| GAGTGGTTCGATATTCGAGG+CGG | - | chr3_3:69298918-69298937 | Msa0467850:intron | 50.0% | |
| AGTGGTTCGATATTCGAGGC+GGG | - | chr3_3:69298919-69298938 | Msa0467850:intron | 50.0% | |
| AGAGGAGACCACACTACCAT+TGG | + | chr3_3:69299355-69299374 | None:intergenic | 50.0% | |
| GCGTGCACATAAAGCCACAC+CGG | + | chr3_3:69298574-69298593 | None:intergenic | 55.0% | |
| TGTGCACGCGCTGCATTTCT+CGG | - | chr3_3:69298585-69298604 | Msa0467850:CDS | 55.0% | |
| ! | GCTGACGTGGAGTGTTAACC+CGG | - | chr3_3:69298761-69298780 | Msa0467850:CDS | 55.0% |
| ! | CTGACGTGGAGTGTTAACCC+GGG | - | chr3_3:69298762-69298781 | Msa0467850:CDS | 55.0% |
| !! | GAGGTGGTTGGTTTGAACCC+GGG | + | chr3_3:69298782-69298801 | None:intergenic | 55.0% |
| !! | GCTGGTGCTGGTTCTGTTTC+TGG | - | chr3_3:69298816-69298835 | Msa0467850:intron | 55.0% |
| ! | GATATTCGAGGCGGGTTTCC+TGG | - | chr3_3:69298927-69298946 | Msa0467850:intron | 55.0% |
| CATAACCTCATACCCGGTCC+AGG | + | chr3_3:69298948-69298967 | None:intergenic | 55.0% | |
| GTTGTGGAAGGCCTGAGACA+AGG | - | chr3_3:69298979-69298998 | Msa0467850:CDS | 55.0% | |
| GCGCTTGTCAAGCGCTTGAT+TGG | - | chr3_3:69299054-69299073 | Msa0467850:CDS | 55.0% | |
| TCCTCTAACCACCTCTCCAC+TGG | + | chr3_3:69299107-69299126 | None:intergenic | 55.0% | |
| AGTGGAGAGGTGGTTAGAGG+AGG | - | chr3_3:69299106-69299125 | Msa0467850:intron | 55.0% | |
| GAGGAGGAGGAACATGTTGC+CGG | - | chr3_3:69299122-69299141 | Msa0467850:intron | 55.0% | |
| GAGGAACATGTTGCCGGTGA+AGG | - | chr3_3:69299128-69299147 | Msa0467850:intron | 55.0% | |
| CATGTTGCCGGTGAAGGTGA+CGG | - | chr3_3:69299134-69299153 | Msa0467850:intron | 55.0% | |
| AACACCACCGTCACCTTCAC+CGG | + | chr3_3:69299144-69299163 | None:intergenic | 55.0% | |
| GCGTGCACATAAAGCCACAC+CGG | + | chr3_3:69298574-69298593 | None:intergenic | 55.0% | |
| TGTGCACGCGCTGCATTTCT+CGG | - | chr3_3:69298585-69298604 | Msa0467850:CDS | 55.0% | |
| ! | GCTGACGTGGAGTGTTAACC+CGG | - | chr3_3:69298761-69298780 | Msa0467850:CDS | 55.0% |
| ! | CTGACGTGGAGTGTTAACCC+GGG | - | chr3_3:69298762-69298781 | Msa0467850:CDS | 55.0% |
| !! | GAGGTGGTTGGTTTGAACCC+GGG | + | chr3_3:69298782-69298801 | None:intergenic | 55.0% |
| !! | GCTGGTGCTGGTTCTGTTTC+TGG | - | chr3_3:69298816-69298835 | Msa0467850:intron | 55.0% |
| ! | GATATTCGAGGCGGGTTTCC+TGG | - | chr3_3:69298927-69298946 | Msa0467850:intron | 55.0% |
| CATAACCTCATACCCGGTCC+AGG | + | chr3_3:69298948-69298967 | None:intergenic | 55.0% | |
| GTTGTGGAAGGCCTGAGACA+AGG | - | chr3_3:69298979-69298998 | Msa0467850:CDS | 55.0% | |
| GCGCTTGTCAAGCGCTTGAT+TGG | - | chr3_3:69299054-69299073 | Msa0467850:CDS | 55.0% | |
| TCCTCTAACCACCTCTCCAC+TGG | + | chr3_3:69299107-69299126 | None:intergenic | 55.0% | |
| AGTGGAGAGGTGGTTAGAGG+AGG | - | chr3_3:69299106-69299125 | Msa0467850:intron | 55.0% | |
| GAGGAGGAGGAACATGTTGC+CGG | - | chr3_3:69299122-69299141 | Msa0467850:intron | 55.0% | |
| GAGGAACATGTTGCCGGTGA+AGG | - | chr3_3:69299128-69299147 | Msa0467850:intron | 55.0% | |
| CATGTTGCCGGTGAAGGTGA+CGG | - | chr3_3:69299134-69299153 | Msa0467850:intron | 55.0% | |
| AACACCACCGTCACCTTCAC+CGG | + | chr3_3:69299144-69299163 | None:intergenic | 55.0% | |
| AGGAAGCGGCGCGTCGTTAA+TGG | - | chr3_3:69298449-69298468 | Msa0467850:CDS | 60.0% | |
| ! | CAAAGACTTACGCGCCGGTG+TGG | - | chr3_3:69298557-69298576 | Msa0467850:CDS | 60.0% |
| GCTGGGTGAGTCTCCTGAAC+CGG | + | chr3_3:69298882-69298901 | None:intergenic | 60.0% | |
| AGGAGACTCACCCAGCGAAC+CGG | - | chr3_3:69298886-69298905 | Msa0467850:intron | 60.0% | |
| GGTTTCCTGGACCGGGTATG+AGG | - | chr3_3:69298940-69298959 | Msa0467850:intron | 60.0% | |
| GCCAGTGGAGAGGTGGTTAG+AGG | - | chr3_3:69299103-69299122 | Msa0467850:intron | 60.0% | |
| GGAGAGGTGGTTAGAGGAGG+AGG | - | chr3_3:69299109-69299128 | Msa0467850:intron | 60.0% | |
| AGGAAGCGGCGCGTCGTTAA+TGG | - | chr3_3:69298449-69298468 | Msa0467850:CDS | 60.0% | |
| ! | CAAAGACTTACGCGCCGGTG+TGG | - | chr3_3:69298557-69298576 | Msa0467850:CDS | 60.0% |
| GCTGGGTGAGTCTCCTGAAC+CGG | + | chr3_3:69298882-69298901 | None:intergenic | 60.0% | |
| AGGAGACTCACCCAGCGAAC+CGG | - | chr3_3:69298886-69298905 | Msa0467850:intron | 60.0% | |
| GGTTTCCTGGACCGGGTATG+AGG | - | chr3_3:69298940-69298959 | Msa0467850:intron | 60.0% | |
| GCCAGTGGAGAGGTGGTTAG+AGG | - | chr3_3:69299103-69299122 | Msa0467850:intron | 60.0% | |
| GGAGAGGTGGTTAGAGGAGG+AGG | - | chr3_3:69299109-69299128 | Msa0467850:intron | 60.0% | |
| ! | TCGAGGCGGGTTTCCTGGAC+CGG | - | chr3_3:69298932-69298951 | Msa0467850:intron | 65.0% |
| AGTGTGCGCCAGTGGAGAGG+TGG | - | chr3_3:69299096-69299115 | Msa0467850:intron | 65.0% | |
| ! | GTTGCCGGTGAAGGTGACGG+TGG | - | chr3_3:69299137-69299156 | Msa0467850:intron | 65.0% |
| ! | TCGAGGCGGGTTTCCTGGAC+CGG | - | chr3_3:69298932-69298951 | Msa0467850:intron | 65.0% |
| AGTGTGCGCCAGTGGAGAGG+TGG | - | chr3_3:69299096-69299115 | Msa0467850:intron | 65.0% | |
| ! | GTTGCCGGTGAAGGTGACGG+TGG | - | chr3_3:69299137-69299156 | Msa0467850:intron | 65.0% |
| ! | CGAGGCGGGTTTCCTGGACC+GGG | - | chr3_3:69298933-69298952 | Msa0467850:intron | 70.0% |
| CAAGGCGGAGTGTGCGCCAG+TGG | - | chr3_3:69299088-69299107 | Msa0467850:intron | 70.0% | |
| CGGAGTGTGCGCCAGTGGAG+AGG | - | chr3_3:69299093-69299112 | Msa0467850:intron | 70.0% | |
| ! | CGAGGCGGGTTTCCTGGACC+GGG | - | chr3_3:69298933-69298952 | Msa0467850:intron | 70.0% |
| CAAGGCGGAGTGTGCGCCAG+TGG | - | chr3_3:69299088-69299107 | Msa0467850:intron | 70.0% | |
| CGGAGTGTGCGCCAGTGGAG+AGG | - | chr3_3:69299093-69299112 | Msa0467850:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 69297795 | 69299460 | 69297795 | ID=Msa0467850;Name=Msa0467850 |
| chr3_3 | mRNA | 69297795 | 69299460 | 69297795 | ID=Msa0467850-mRNA-1;Parent=Msa0467850;Name=Msa0467850-mRNA-1;_AED=0.04;_eAED=0.04;_QI=48|1|1|1|1|1|3|264|382 |
| chr3_3 | exon | 69297795 | 69298832 | 69297795 | ID=Msa0467850-mRNA-1:exon:16406;Parent=Msa0467850-mRNA-1 |
| chr3_3 | exon | 69298942 | 69299104 | 69298942 | ID=Msa0467850-mRNA-1:exon:16405;Parent=Msa0467850-mRNA-1 |
| chr3_3 | exon | 69299201 | 69299460 | 69299201 | ID=Msa0467850-mRNA-1:exon:16404;Parent=Msa0467850-mRNA-1 |
| chr3_3 | five_prime_UTR | 69299413 | 69299460 | 69299413 | ID=Msa0467850-mRNA-1:five_prime_utr;Parent=Msa0467850-mRNA-1 |
| chr3_3 | CDS | 69299201 | 69299412 | 69299201 | ID=Msa0467850-mRNA-1:cds;Parent=Msa0467850-mRNA-1 |
| chr3_3 | CDS | 69298942 | 69299104 | 69298942 | ID=Msa0467850-mRNA-1:cds;Parent=Msa0467850-mRNA-1 |
| chr3_3 | CDS | 69298059 | 69298832 | 69298059 | ID=Msa0467850-mRNA-1:cds;Parent=Msa0467850-mRNA-1 |
| chr3_3 | three_prime_UTR | 69297795 | 69298058 | 69297795 | ID=Msa0467850-mRNA-1:three_prime_utr;Parent=Msa0467850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
