Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514240 | XP_003601783.3 | 97.644 | 382 | 8 | 1 | 1 | 382 | 1 | 381 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514240 | sp|Q9FYF9|FB76_ARATH | 69.516 | 351 | 90 | 6 | 34 | 379 | 38 | 376 | 1.08e-171 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514240 | A0A396IXW5 | 97.644 | 382 | 8 | 1 | 1 | 382 | 1 | 381 | 0.0 | 771 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0514240 | 0.810779 | 9.728413e-51 | -8.615850e-47 |
| Msa0109500 | Msa0514240 | 0.803013 | 4.267920e-49 | -8.615850e-47 |
| Msa0152420 | Msa0514240 | 0.805243 | 1.466211e-49 | -8.615850e-47 |
| Msa0226250 | Msa0514240 | 0.807940 | 3.954194e-50 | -8.615850e-47 |
| Msa0373240 | Msa0514240 | 0.919484 | 4.249147e-87 | -8.615850e-47 |
| Msa0421830 | Msa0514240 | 0.809962 | 1.460039e-50 | -8.615850e-47 |
| Msa0467850 | Msa0514240 | 0.960034 | 4.201860e-118 | -8.615850e-47 |
| Msa0491040 | Msa0514240 | 0.809098 | 2.238208e-50 | -8.615850e-47 |
| Msa0506530 | Msa0514240 | -0.800108 | 1.682391e-48 | -8.615850e-47 |
| Msa0509020 | Msa0514240 | 0.803042 | 4.210224e-49 | -8.615850e-47 |
| Msa0514240 | Msa0719490 | -0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa0514240 | Msa0769390 | 0.807258 | 5.520167e-50 | -8.615850e-47 |
| Msa0514240 | Msa0968320 | -0.837015 | 6.669005e-57 | -8.615850e-47 |
| Msa0514240 | Msa1083410 | 0.814752 | 1.313104e-51 | -8.615850e-47 |
| Msa0514240 | Msa1128160 | 0.805852 | 1.092701e-49 | -8.615850e-47 |
| Msa0514240 | Msa1165360 | 0.805425 | 1.343129e-49 | -8.615850e-47 |
| Msa0514240 | Msa1257870 | -0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0514240 | Msa1295850 | 0.803618 | 3.199041e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514240 | MtrunA17_Chr3g0122491 | 97.644 | 382 | 8 | 1 | 1 | 382 | 1 | 381 | 0.0 | 771 |
| Msa0514240 | MtrunA17_Chr8g0377371 | 70.190 | 369 | 89 | 3 | 1 | 358 | 1 | 359 | 0.0 | 530 |
| Msa0514240 | MtrunA17_Chr3g0132261 | 62.315 | 337 | 112 | 3 | 26 | 360 | 2 | 325 | 2.13e-143 | 410 |
| Msa0514240 | MtrunA17_Chr2g0302201 | 58.934 | 319 | 113 | 4 | 26 | 339 | 2 | 307 | 1.13e-122 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514240 | AT1G67340.1 | 69.516 | 351 | 90 | 6 | 34 | 379 | 38 | 376 | 1.09e-172 | 486 |
| Msa0514240 | AT5G50450.1 | 56.901 | 355 | 124 | 3 | 23 | 376 | 5 | 331 | 7.83e-138 | 396 |
Find 103 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGTGCTGGTTCTGTTTC+TGG | 0.053970 | 3_4:-64899447 | Msa0514240:CDS |
| TGTCCTTTGCTGAGTGATTT+TGG | 0.190426 | 3_4:-64899417 | Msa0514240:CDS |
| GATATTCGAGGCGGGTTTCC+TGG | 0.252033 | 3_4:-64899336 | Msa0514240:CDS |
| ATGAGGTTATGTTCGAATTC+TGG | 0.259191 | 3_4:-64899306 | Msa0514240:CDS |
| AGGATAACACAAACCTCTTC+TGG | 0.297325 | 3_4:+64900413 | None:intergenic |
| GCTGGTTCTGTTTCTGGTTC+GGG | 0.299737 | 3_4:-64899441 | Msa0514240:CDS |
| TACCATTCCAAGAGTGTAAC+AGG | 0.304317 | 3_4:+64899969 | None:intergenic |
| AGGAAGCGGCGCGTCGTTAA+TGG | 0.308133 | 3_4:-64899814 | Msa0514240:CDS |
| TGCTGGTTCTGTTTCTGGTT+CGG | 0.313707 | 3_4:-64899442 | Msa0514240:CDS |
| TGGTTGTAACGTTCCGGTTC+AGG | 0.315466 | 3_4:-64899397 | Msa0514240:CDS |
| AAAGTACTACTATTGGTAAA+AGG | 0.362709 | 3_4:+64898885 | None:intergenic |
| TGTGCACGCGCTGCATTTCT+CGG | 0.363700 | 3_4:-64899678 | Msa0514240:CDS |
| CGCGCCGTCTTTGTATTCAT+TGG | 0.368841 | 3_4:-64899769 | Msa0514240:CDS |
| GCGCTTGTCAAGCGCTTGAT+TGG | 0.371030 | 3_4:-64899209 | Msa0514240:CDS |
| CTCAAACGCTGTGTTGATGC+TGG | 0.395843 | 3_4:-64900003 | Msa0514240:CDS |
| AACTCATGTTTCCTTGTCTC+AGG | 0.404750 | 3_4:+64899273 | None:intergenic |
| ACGGTAACGGAAGATTGTTT+TGG | 0.408205 | 3_4:-64899032 | Msa0514240:three_prime_UTR |
| ATTGAAGCCTGTTACACTCT+TGG | 0.412205 | 3_4:-64899976 | Msa0514240:CDS |
| TTTGATAGTTGAAGTGTTTG+AGG | 0.425616 | 3_4:+64900393 | None:intergenic |
| CATTGTTTACAAGACGGTTA+CGG | 0.429974 | 3_4:-64899627 | Msa0514240:CDS |
| AACAGATGCAAAAGACTAAA+CGG | 0.431674 | 3_4:-64900117 | Msa0514240:intron |
| CAACACAGCGTTTGAGAAAA+CGG | 0.444420 | 3_4:+64900010 | None:intergenic |
| GGTTTCCTGGACCGGGTATG+AGG | 0.445338 | 3_4:-64899323 | Msa0514240:CDS |
| ACATGAGTTTCGAAGATGTT+CGG | 0.448702 | 3_4:-64899259 | Msa0514240:CDS |
| GAGGAGGAGGAACATGTTGC+CGG | 0.452656 | 3_4:-64899141 | Msa0514240:CDS |
| GCTGACGTGGAGTGTTAACC+CGG | 0.456764 | 3_4:-64899502 | Msa0514240:CDS |
| GCCAGTGGAGAGGTGGTTAG+AGG | 0.457892 | 3_4:-64899160 | Msa0514240:CDS |
| GTTATTGCCGTTAGATAAAA+CGG | 0.459886 | 3_4:+64899539 | None:intergenic |
| TCCATCATAAACCGGTTCGC+TGG | 0.462777 | 3_4:+64899366 | None:intergenic |
| GCTGGGTGAGTCTCCTGAAC+CGG | 0.464172 | 3_4:+64899384 | None:intergenic |
| TTGGCAGTGATTCAGTTCAA+TGG | 0.465205 | 3_4:-64899750 | Msa0514240:CDS |
| GGAGAGGTGGTTAGAGGAGG+AGG | 0.467062 | 3_4:-64899154 | Msa0514240:CDS |
| GGTTGTGCTTGATAGCTGAT+AGG | 0.470550 | 3_4:-64899085 | Msa0514240:exon |
| TTTCGAAGATGTTCGGTTTG+TGG | 0.474837 | 3_4:-64899252 | Msa0514240:CDS |
| AGGAGACTCACCCAGCGAAC+CGG | 0.480282 | 3_4:-64899377 | Msa0514240:CDS |
| ATAGAGAGAACTATATCATC+AGG | 0.482596 | 3_4:+64900291 | None:intergenic |
| TCCTCTAACCACCTCTCCAC+TGG | 0.483960 | 3_4:+64899159 | None:intergenic |
| TCGAGGCGGGTTTCCTGGAC+CGG | 0.486003 | 3_4:-64899331 | Msa0514240:CDS |
| GATATAGTTCTCTCTATACT+TGG | 0.489280 | 3_4:-64900285 | Msa0514240:CDS |
| AACACCACCGTCACCTTCAC+CGG | 0.490736 | 3_4:+64899122 | None:intergenic |
| TAATAGATAGATGATAAAGA+AGG | 0.492994 | 3_4:+64900445 | None:intergenic |
| GAAGGGTAAAAGCATAGAGA+GGG | 0.495464 | 3_4:+64900463 | None:intergenic |
| GTGATTCAGTTCAATGGAAG+TGG | 0.496025 | 3_4:-64899744 | Msa0514240:CDS |
| CAAGGCGGAGTGTGCGCCAG+TGG | 0.498772 | 3_4:-64899175 | Msa0514240:CDS |
| CCCAGCGAACCGGTTTATGA+TGG | 0.509369 | 3_4:-64899367 | Msa0514240:CDS |
| CGAACCACTCCATCATAAAC+CGG | 0.511669 | 3_4:+64899358 | None:intergenic |
| AATAGATAGATGATAAAGAA+GGG | 0.516305 | 3_4:+64900446 | None:intergenic |
| TGAGGTGGTTGGTTTGAACC+CGG | 0.521097 | 3_4:+64899483 | None:intergenic |
| ATTATTATGCGAACCAGAAG+AGG | 0.526910 | 3_4:-64900426 | Msa0514240:exon |
| ACAAACAACCGTTGCTGACG+TGG | 0.529455 | 3_4:-64899515 | Msa0514240:CDS |
| CCATCATAAACCGGTTCGCT+GGG | 0.529879 | 3_4:+64899367 | None:intergenic |
| GTTCGAATTCTGGTTGTGGA+AGG | 0.530016 | 3_4:-64899296 | Msa0514240:CDS |
| AATGTTAACGGTGACGGTAA+CGG | 0.530413 | 3_4:-64899045 | Msa0514240:three_prime_UTR |
| TGATTGGAAGTTTCGACACA+AGG | 0.534148 | 3_4:-64899193 | Msa0514240:CDS |
| AGAAGGGTAAAAGCATAGAG+AGG | 0.538553 | 3_4:+64900462 | None:intergenic |
| TGTTTGCAAAACAGAGGAAG+CGG | 0.541749 | 3_4:-64899828 | Msa0514240:CDS |
| TTTCAAAATGTTAACGGTGA+CGG | 0.543665 | 3_4:-64899051 | Msa0514240:three_prime_UTR |
| AGAGGAGACCACACTACCAT+TGG | 0.543834 | 3_4:+64898911 | None:intergenic |
| TTATGTTCGAATTCTGGTTG+TGG | 0.545212 | 3_4:-64899300 | Msa0514240:CDS |
| TATTGTCTCATTTATTACTG+TGG | 0.546729 | 3_4:-64898958 | Msa0514240:three_prime_UTR |
| GAGGAACATGTTGCCGGTGA+AGG | 0.549146 | 3_4:-64899135 | Msa0514240:CDS |
| AAAATCTGAAGGAGAATTTG+CGG | 0.550795 | 3_4:+64900248 | None:intergenic |
| ATGGAGTGGTTCGATATTCG+AGG | 0.555267 | 3_4:-64899348 | Msa0514240:CDS |
| CATAACCTCATACCCGGTCC+AGG | 0.560065 | 3_4:+64899318 | None:intergenic |
| GCATTTCTCGGTCACATCGA+CGG | 0.562721 | 3_4:-64899666 | Msa0514240:CDS |
| CGAGGCGGGTTTCCTGGACC+GGG | 0.564242 | 3_4:-64899330 | Msa0514240:CDS |
| GTTAAACAGAACGTTATTGA+AGG | 0.570072 | 3_4:-64899603 | Msa0514240:CDS |
| CGGAGTGTGCGCCAGTGGAG+AGG | 0.575589 | 3_4:-64899170 | Msa0514240:CDS |
| ATCGACGGTTTACGTGAGCT+TGG | 0.585324 | 3_4:-64899651 | Msa0514240:CDS |
| GAGGTGGTTGGTTTGAACCC+GGG | 0.585702 | 3_4:+64899484 | None:intergenic |
| AGTGTGCGCCAGTGGAGAGG+TGG | 0.586560 | 3_4:-64899167 | Msa0514240:CDS |
| AATGCAATTGCAAAGTCCAA+TGG | 0.595187 | 3_4:-64898927 | Msa0514240:three_prime_UTR |
| AAACACGAAGCTGAGGTGGT+TGG | 0.595586 | 3_4:+64899472 | None:intergenic |
| CTTGGTCATTGTTTACAAGA+CGG | 0.596462 | 3_4:-64899633 | Msa0514240:CDS |
| AGCCTGTTACACTCTTGGAA+TGG | 0.601007 | 3_4:-64899971 | Msa0514240:intron |
| AGAACACTGATAAAATCTGA+AGG | 0.607669 | 3_4:+64900237 | None:intergenic |
| CAAAGACTTACGCGCCGGTG+TGG | 0.610989 | 3_4:-64899706 | Msa0514240:CDS |
| TGCAAAGTCCAATGGTAGTG+TGG | 0.612273 | 3_4:-64898919 | Msa0514240:three_prime_UTR |
| ATTCAGTTCAATGGAAGTGG+AGG | 0.623225 | 3_4:-64899741 | Msa0514240:CDS |
| TGGCATTGGATACTGAAACA+TGG | 0.624235 | 3_4:-64898997 | Msa0514240:three_prime_UTR |
| GCTAAAACACGAAGCTGAGG+TGG | 0.627721 | 3_4:+64899468 | None:intergenic |
| AAGGGTAAAAGCATAGAGAG+GGG | 0.628555 | 3_4:+64900464 | None:intergenic |
| TTAACACTCCACGTCAGCAA+CGG | 0.629849 | 3_4:+64899507 | None:intergenic |
| AGAACGTTATTGAAGGTCGA+CGG | 0.630802 | 3_4:-64899596 | Msa0514240:CDS |
| GTTGTGGAAGGCCTGAGACA+AGG | 0.631392 | 3_4:-64899284 | Msa0514240:CDS |
| AGTGGAGAGGTGGTTAGAGG+AGG | 0.634916 | 3_4:-64899157 | Msa0514240:CDS |
| CAACCAAAATCACTCAGCAA+AGG | 0.637304 | 3_4:+64899414 | None:intergenic |
| AGTGGTTCGATATTCGAGGC+GGG | 0.638570 | 3_4:-64899344 | Msa0514240:CDS |
| CATGTTGCCGGTGAAGGTGA+CGG | 0.641096 | 3_4:-64899129 | Msa0514240:CDS |
| CGAACCGGTTTATGATGGAG+TGG | 0.643044 | 3_4:-64899362 | Msa0514240:CDS |
| CCAGCTAAAACACGAAGCTG+AGG | 0.643105 | 3_4:+64899465 | None:intergenic |
| TTCGAACATAACCTCATACC+CGG | 0.646462 | 3_4:+64899312 | None:intergenic |
| GCGTGCACATAAAGCCACAC+CGG | 0.649753 | 3_4:+64899692 | None:intergenic |
| AACGACAAAGACTTACGCGC+CGG | 0.652915 | 3_4:-64899711 | Msa0514240:CDS |
| ATCTGAAGGAGAATTTGCGG+TGG | 0.661673 | 3_4:+64900251 | None:intergenic |
| TGGTGTTAACATTGATGAGG+TGG | 0.662483 | 3_4:-64899106 | Msa0514240:CDS |
| GAGTGGTTCGATATTCGAGG+CGG | 0.662713 | 3_4:-64899345 | Msa0514240:CDS |
| CTGACGTGGAGTGTTAACCC+GGG | 0.664204 | 3_4:-64899501 | Msa0514240:CDS |
| ACTATTGGTAAAAGGAACAG+AGG | 0.675720 | 3_4:+64898893 | None:intergenic |
| CGGTGGTGTTAACATTGATG+AGG | 0.680359 | 3_4:-64899109 | Msa0514240:CDS |
| ACTGCCAATGAATACAAAGA+CGG | 0.680538 | 3_4:+64899765 | None:intergenic |
| TTGGAAGTTTCGACACAAGG+CGG | 0.683789 | 3_4:-64899190 | Msa0514240:CDS |
| GTTGCCGGTGAAGGTGACGG+TGG | 0.699219 | 3_4:-64899126 | Msa0514240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTCAAAATGTTAA+CGG | - | chr3_4:64900237-64900256 | Msa0514240:CDS | 10.0% |
| !!! | ATTATTTTTCAAAATGTTAA+CGG | - | chr3_4:64900237-64900256 | Msa0514240:CDS | 10.0% |
| !!! | AAAATTTCTAATTTTTTGAG+TGG | + | chr3_4:64899352-64899371 | None:intergenic | 15.0% |
| !!! | AAAATTTCTAATTTTTTGAG+TGG | + | chr3_4:64899352-64899371 | None:intergenic | 15.0% |
| !! | AATAGATAGATGATAAAGAA+GGG | + | chr3_4:64898851-64898870 | None:intergenic | 20.0% |
| !! | TAATAGATAGATGATAAAGA+AGG | + | chr3_4:64898852-64898871 | None:intergenic | 20.0% |
| !! | AATAGATAGATGATAAAGAA+GGG | + | chr3_4:64898851-64898870 | None:intergenic | 20.0% |
| !! | TAATAGATAGATGATAAAGA+AGG | + | chr3_4:64898852-64898871 | None:intergenic | 20.0% |
| !! | TTTTATTGTTTGCAAAACAG+AGG | - | chr3_4:64899460-64899479 | Msa0514240:CDS | 25.0% |
| !!! | TGTTTTGGAACTGTATTTTT+TGG | - | chr3_4:64900277-64900296 | Msa0514240:CDS | 25.0% |
| ! | TATTGTCTCATTTATTACTG+TGG | - | chr3_4:64900336-64900355 | Msa0514240:CDS | 25.0% |
| !! | AAAGTACTACTATTGGTAAA+AGG | + | chr3_4:64900412-64900431 | None:intergenic | 25.0% |
| !!! | ACGTAAAAAAGTACTACTAT+TGG | + | chr3_4:64900419-64900438 | None:intergenic | 25.0% |
| !! | TTTTATTGTTTGCAAAACAG+AGG | - | chr3_4:64899460-64899479 | Msa0514240:CDS | 25.0% |
| !!! | TGTTTTGGAACTGTATTTTT+TGG | - | chr3_4:64900277-64900296 | Msa0514240:CDS | 25.0% |
| ! | TATTGTCTCATTTATTACTG+TGG | - | chr3_4:64900336-64900355 | Msa0514240:CDS | 25.0% |
| !! | AAAGTACTACTATTGGTAAA+AGG | + | chr3_4:64900412-64900431 | None:intergenic | 25.0% |
| !!! | ACGTAAAAAAGTACTACTAT+TGG | + | chr3_4:64900419-64900438 | None:intergenic | 25.0% |
| ! | TTTGATAGTTGAAGTGTTTG+AGG | + | chr3_4:64898904-64898923 | None:intergenic | 30.0% |
| !!! | AAATCATGAGAAGTGTTTTG+TGG | + | chr3_4:64898970-64898989 | None:intergenic | 30.0% |
| ATAGAGAGAACTATATCATC+AGG | + | chr3_4:64899006-64899025 | None:intergenic | 30.0% | |
| GATATAGTTCTCTCTATACT+TGG | - | chr3_4:64899009-64899028 | Msa0514240:three_prime_UTR | 30.0% | |
| AAAATCTGAAGGAGAATTTG+CGG | + | chr3_4:64899049-64899068 | None:intergenic | 30.0% | |
| AGAACACTGATAAAATCTGA+AGG | + | chr3_4:64899060-64899079 | None:intergenic | 30.0% | |
| AACAGATGCAAAAGACTAAA+CGG | - | chr3_4:64899177-64899196 | Msa0514240:CDS | 30.0% | |
| !! | TAATGTTTTGTTCGAAGCTT+TGG | + | chr3_4:64899229-64899248 | None:intergenic | 30.0% |
| TATCAGTCAAACCTAAAAAC+TGG | - | chr3_4:64899247-64899266 | Msa0514240:CDS | 30.0% | |
| GTTAAACAGAACGTTATTGA+AGG | - | chr3_4:64899691-64899710 | Msa0514240:CDS | 30.0% | |
| GTTATTGCCGTTAGATAAAA+CGG | + | chr3_4:64899758-64899777 | None:intergenic | 30.0% | |
| TTTCAAAATGTTAACGGTGA+CGG | - | chr3_4:64900243-64900262 | Msa0514240:CDS | 30.0% | |
| ! | TTTGATAGTTGAAGTGTTTG+AGG | + | chr3_4:64898904-64898923 | None:intergenic | 30.0% |
| !!! | AAATCATGAGAAGTGTTTTG+TGG | + | chr3_4:64898970-64898989 | None:intergenic | 30.0% |
| ATAGAGAGAACTATATCATC+AGG | + | chr3_4:64899006-64899025 | None:intergenic | 30.0% | |
| GATATAGTTCTCTCTATACT+TGG | - | chr3_4:64899009-64899028 | Msa0514240:three_prime_UTR | 30.0% | |
| AAAATCTGAAGGAGAATTTG+CGG | + | chr3_4:64899049-64899068 | None:intergenic | 30.0% | |
| AGAACACTGATAAAATCTGA+AGG | + | chr3_4:64899060-64899079 | None:intergenic | 30.0% | |
| AACAGATGCAAAAGACTAAA+CGG | - | chr3_4:64899177-64899196 | Msa0514240:CDS | 30.0% | |
| !! | TAATGTTTTGTTCGAAGCTT+TGG | + | chr3_4:64899229-64899248 | None:intergenic | 30.0% |
| TATCAGTCAAACCTAAAAAC+TGG | - | chr3_4:64899247-64899266 | Msa0514240:CDS | 30.0% | |
| GTTAAACAGAACGTTATTGA+AGG | - | chr3_4:64899691-64899710 | Msa0514240:CDS | 30.0% | |
| GTTATTGCCGTTAGATAAAA+CGG | + | chr3_4:64899758-64899777 | None:intergenic | 30.0% | |
| TTTCAAAATGTTAACGGTGA+CGG | - | chr3_4:64900243-64900262 | Msa0514240:CDS | 30.0% | |
| ATTATTATGCGAACCAGAAG+AGG | - | chr3_4:64898868-64898887 | Msa0514240:three_prime_UTR | 35.0% | |
| ACTGCCAATGAATACAAAGA+CGG | + | chr3_4:64899532-64899551 | None:intergenic | 35.0% | |
| CTTGGTCATTGTTTACAAGA+CGG | - | chr3_4:64899661-64899680 | Msa0514240:CDS | 35.0% | |
| CATTGTTTACAAGACGGTTA+CGG | - | chr3_4:64899667-64899686 | Msa0514240:CDS | 35.0% | |
| !!! | TGATTTTGGTTGTAACGTTC+CGG | - | chr3_4:64899891-64899910 | Msa0514240:intron | 35.0% |
| ATGAGGTTATGTTCGAATTC+TGG | - | chr3_4:64899988-64900007 | Msa0514240:CDS | 35.0% | |
| ! | TTATGTTCGAATTCTGGTTG+TGG | - | chr3_4:64899994-64900013 | Msa0514240:CDS | 35.0% |
| ACATGAGTTTCGAAGATGTT+CGG | - | chr3_4:64900035-64900054 | Msa0514240:CDS | 35.0% | |
| !!! | GGAACTGTATTTTTTGGCAT+TGG | - | chr3_4:64900283-64900302 | Msa0514240:CDS | 35.0% |
| AATGCAATTGCAAAGTCCAA+TGG | - | chr3_4:64900367-64900386 | Msa0514240:CDS | 35.0% | |
| ACTATTGGTAAAAGGAACAG+AGG | + | chr3_4:64900404-64900423 | None:intergenic | 35.0% | |
| ATTATTATGCGAACCAGAAG+AGG | - | chr3_4:64898868-64898887 | Msa0514240:three_prime_UTR | 35.0% | |
| ACTGCCAATGAATACAAAGA+CGG | + | chr3_4:64899532-64899551 | None:intergenic | 35.0% | |
| CTTGGTCATTGTTTACAAGA+CGG | - | chr3_4:64899661-64899680 | Msa0514240:CDS | 35.0% | |
| CATTGTTTACAAGACGGTTA+CGG | - | chr3_4:64899667-64899686 | Msa0514240:CDS | 35.0% | |
| !!! | TGATTTTGGTTGTAACGTTC+CGG | - | chr3_4:64899891-64899910 | Msa0514240:intron | 35.0% |
| ATGAGGTTATGTTCGAATTC+TGG | - | chr3_4:64899988-64900007 | Msa0514240:CDS | 35.0% | |
| ! | TTATGTTCGAATTCTGGTTG+TGG | - | chr3_4:64899994-64900013 | Msa0514240:CDS | 35.0% |
| ACATGAGTTTCGAAGATGTT+CGG | - | chr3_4:64900035-64900054 | Msa0514240:CDS | 35.0% | |
| !!! | GGAACTGTATTTTTTGGCAT+TGG | - | chr3_4:64900283-64900302 | Msa0514240:CDS | 35.0% |
| AATGCAATTGCAAAGTCCAA+TGG | - | chr3_4:64900367-64900386 | Msa0514240:CDS | 35.0% | |
| ACTATTGGTAAAAGGAACAG+AGG | + | chr3_4:64900404-64900423 | None:intergenic | 35.0% | |
| ! | AAGGGTAAAAGCATAGAGAG+GGG | + | chr3_4:64898833-64898852 | None:intergenic | 40.0% |
| ! | GAAGGGTAAAAGCATAGAGA+GGG | + | chr3_4:64898834-64898853 | None:intergenic | 40.0% |
| ! | AGAAGGGTAAAAGCATAGAG+AGG | + | chr3_4:64898835-64898854 | None:intergenic | 40.0% |
| AGGATAACACAAACCTCTTC+TGG | + | chr3_4:64898884-64898903 | None:intergenic | 40.0% | |
| CAACACAGCGTTTGAGAAAA+CGG | + | chr3_4:64899287-64899306 | None:intergenic | 40.0% | |
| ATTGAAGCCTGTTACACTCT+TGG | - | chr3_4:64899318-64899337 | Msa0514240:CDS | 40.0% | |
| ! | TACCATTCCAAGAGTGTAAC+AGG | + | chr3_4:64899328-64899347 | None:intergenic | 40.0% |
| TGTTTGCAAAACAGAGGAAG+CGG | - | chr3_4:64899466-64899485 | Msa0514240:CDS | 40.0% | |
| TTGGCAGTGATTCAGTTCAA+TGG | - | chr3_4:64899544-64899563 | Msa0514240:CDS | 40.0% | |
| GTGATTCAGTTCAATGGAAG+TGG | - | chr3_4:64899550-64899569 | Msa0514240:CDS | 40.0% | |
| ATTCAGTTCAATGGAAGTGG+AGG | - | chr3_4:64899553-64899572 | Msa0514240:CDS | 40.0% | |
| AGAACGTTATTGAAGGTCGA+CGG | - | chr3_4:64899698-64899717 | Msa0514240:CDS | 40.0% | |
| ! | TGTCCTTTGCTGAGTGATTT+TGG | - | chr3_4:64899877-64899896 | Msa0514240:intron | 40.0% |
| CAACCAAAATCACTCAGCAA+AGG | + | chr3_4:64899883-64899902 | None:intergenic | 40.0% | |
| TTCGAACATAACCTCATACC+CGG | + | chr3_4:64899985-64900004 | None:intergenic | 40.0% | |
| AACTCATGTTTCCTTGTCTC+AGG | + | chr3_4:64900024-64900043 | None:intergenic | 40.0% | |
| ! | TTTCGAAGATGTTCGGTTTG+TGG | - | chr3_4:64900042-64900061 | Msa0514240:CDS | 40.0% |
| TGATTGGAAGTTTCGACACA+AGG | - | chr3_4:64900101-64900120 | Msa0514240:CDS | 40.0% | |
| ! | TGGTGTTAACATTGATGAGG+TGG | - | chr3_4:64900188-64900207 | Msa0514240:intron | 40.0% |
| ! | AATGTTAACGGTGACGGTAA+CGG | - | chr3_4:64900249-64900268 | Msa0514240:CDS | 40.0% |
| !!! | ACGGTAACGGAAGATTGTTT+TGG | - | chr3_4:64900262-64900281 | Msa0514240:CDS | 40.0% |
| ! | TGGCATTGGATACTGAAACA+TGG | - | chr3_4:64900297-64900316 | Msa0514240:CDS | 40.0% |
| ! | AAGGGTAAAAGCATAGAGAG+GGG | + | chr3_4:64898833-64898852 | None:intergenic | 40.0% |
| ! | GAAGGGTAAAAGCATAGAGA+GGG | + | chr3_4:64898834-64898853 | None:intergenic | 40.0% |
| ! | AGAAGGGTAAAAGCATAGAG+AGG | + | chr3_4:64898835-64898854 | None:intergenic | 40.0% |
| AGGATAACACAAACCTCTTC+TGG | + | chr3_4:64898884-64898903 | None:intergenic | 40.0% | |
| CAACACAGCGTTTGAGAAAA+CGG | + | chr3_4:64899287-64899306 | None:intergenic | 40.0% | |
| ATTGAAGCCTGTTACACTCT+TGG | - | chr3_4:64899318-64899337 | Msa0514240:CDS | 40.0% | |
| ! | TACCATTCCAAGAGTGTAAC+AGG | + | chr3_4:64899328-64899347 | None:intergenic | 40.0% |
| TGTTTGCAAAACAGAGGAAG+CGG | - | chr3_4:64899466-64899485 | Msa0514240:CDS | 40.0% | |
| TTGGCAGTGATTCAGTTCAA+TGG | - | chr3_4:64899544-64899563 | Msa0514240:CDS | 40.0% | |
| GTGATTCAGTTCAATGGAAG+TGG | - | chr3_4:64899550-64899569 | Msa0514240:CDS | 40.0% | |
| ATTCAGTTCAATGGAAGTGG+AGG | - | chr3_4:64899553-64899572 | Msa0514240:CDS | 40.0% | |
| AGAACGTTATTGAAGGTCGA+CGG | - | chr3_4:64899698-64899717 | Msa0514240:CDS | 40.0% | |
| ! | TGTCCTTTGCTGAGTGATTT+TGG | - | chr3_4:64899877-64899896 | Msa0514240:intron | 40.0% |
| CAACCAAAATCACTCAGCAA+AGG | + | chr3_4:64899883-64899902 | None:intergenic | 40.0% | |
| TTCGAACATAACCTCATACC+CGG | + | chr3_4:64899985-64900004 | None:intergenic | 40.0% | |
| AACTCATGTTTCCTTGTCTC+AGG | + | chr3_4:64900024-64900043 | None:intergenic | 40.0% | |
| ! | TTTCGAAGATGTTCGGTTTG+TGG | - | chr3_4:64900042-64900061 | Msa0514240:CDS | 40.0% |
| TGATTGGAAGTTTCGACACA+AGG | - | chr3_4:64900101-64900120 | Msa0514240:CDS | 40.0% | |
| ! | TGGTGTTAACATTGATGAGG+TGG | - | chr3_4:64900188-64900207 | Msa0514240:intron | 40.0% |
| ! | AATGTTAACGGTGACGGTAA+CGG | - | chr3_4:64900249-64900268 | Msa0514240:CDS | 40.0% |
| !!! | ACGGTAACGGAAGATTGTTT+TGG | - | chr3_4:64900262-64900281 | Msa0514240:CDS | 40.0% |
| ! | TGGCATTGGATACTGAAACA+TGG | - | chr3_4:64900297-64900316 | Msa0514240:CDS | 40.0% |
| ATCTGAAGGAGAATTTGCGG+TGG | + | chr3_4:64899046-64899065 | None:intergenic | 45.0% | |
| ! | GCAGAGTCACACCAGTTTTT+AGG | + | chr3_4:64899261-64899280 | None:intergenic | 45.0% |
| AGCCTGTTACACTCTTGGAA+TGG | - | chr3_4:64899323-64899342 | Msa0514240:CDS | 45.0% | |
| TTGTCGTGTGTCTGCAGATT+CGG | - | chr3_4:64899437-64899456 | Msa0514240:CDS | 45.0% | |
| !!! | CTCGCTGCCGTTTTATCTAA+CGG | - | chr3_4:64899748-64899767 | Msa0514240:CDS | 45.0% |
| TTAACACTCCACGTCAGCAA+CGG | + | chr3_4:64899790-64899809 | None:intergenic | 45.0% | |
| !! | TGCTGGTTCTGTTTCTGGTT+CGG | - | chr3_4:64899852-64899871 | Msa0514240:intron | 45.0% |
| CGAACCACTCCATCATAAAC+CGG | + | chr3_4:64899939-64899958 | None:intergenic | 45.0% | |
| ATGGAGTGGTTCGATATTCG+AGG | - | chr3_4:64899946-64899965 | Msa0514240:intron | 45.0% | |
| ! | GTTCGAATTCTGGTTGTGGA+AGG | - | chr3_4:64899998-64900017 | Msa0514240:CDS | 45.0% |
| TTGGAAGTTTCGACACAAGG+CGG | - | chr3_4:64900104-64900123 | Msa0514240:CDS | 45.0% | |
| ! | CGGTGGTGTTAACATTGATG+AGG | - | chr3_4:64900185-64900204 | Msa0514240:intron | 45.0% |
| ! | GGTTGTGCTTGATAGCTGAT+AGG | - | chr3_4:64900209-64900228 | Msa0514240:intron | 45.0% |
| ! | TGCAAAGTCCAATGGTAGTG+TGG | - | chr3_4:64900375-64900394 | Msa0514240:CDS | 45.0% |
| ATCTGAAGGAGAATTTGCGG+TGG | + | chr3_4:64899046-64899065 | None:intergenic | 45.0% | |
| ! | GCAGAGTCACACCAGTTTTT+AGG | + | chr3_4:64899261-64899280 | None:intergenic | 45.0% |
| AGCCTGTTACACTCTTGGAA+TGG | - | chr3_4:64899323-64899342 | Msa0514240:CDS | 45.0% | |
| TTGTCGTGTGTCTGCAGATT+CGG | - | chr3_4:64899437-64899456 | Msa0514240:CDS | 45.0% | |
| !!! | CTCGCTGCCGTTTTATCTAA+CGG | - | chr3_4:64899748-64899767 | Msa0514240:CDS | 45.0% |
| TTAACACTCCACGTCAGCAA+CGG | + | chr3_4:64899790-64899809 | None:intergenic | 45.0% | |
| !! | TGCTGGTTCTGTTTCTGGTT+CGG | - | chr3_4:64899852-64899871 | Msa0514240:intron | 45.0% |
| CGAACCACTCCATCATAAAC+CGG | + | chr3_4:64899939-64899958 | None:intergenic | 45.0% | |
| ATGGAGTGGTTCGATATTCG+AGG | - | chr3_4:64899946-64899965 | Msa0514240:intron | 45.0% | |
| ! | GTTCGAATTCTGGTTGTGGA+AGG | - | chr3_4:64899998-64900017 | Msa0514240:CDS | 45.0% |
| TTGGAAGTTTCGACACAAGG+CGG | - | chr3_4:64900104-64900123 | Msa0514240:CDS | 45.0% | |
| ! | CGGTGGTGTTAACATTGATG+AGG | - | chr3_4:64900185-64900204 | Msa0514240:intron | 45.0% |
| ! | GGTTGTGCTTGATAGCTGAT+AGG | - | chr3_4:64900209-64900228 | Msa0514240:intron | 45.0% |
| ! | TGCAAAGTCCAATGGTAGTG+TGG | - | chr3_4:64900375-64900394 | Msa0514240:CDS | 45.0% |
| ! | CTCAAACGCTGTGTTGATGC+TGG | - | chr3_4:64899291-64899310 | Msa0514240:CDS | 50.0% |
| CGCGCCGTCTTTGTATTCAT+TGG | - | chr3_4:64899525-64899544 | Msa0514240:CDS | 50.0% | |
| AACGACAAAGACTTACGCGC+CGG | - | chr3_4:64899583-64899602 | Msa0514240:CDS | 50.0% | |
| GCATTTCTCGGTCACATCGA+CGG | - | chr3_4:64899628-64899647 | Msa0514240:CDS | 50.0% | |
| ATCGACGGTTTACGTGAGCT+TGG | - | chr3_4:64899643-64899662 | Msa0514240:CDS | 50.0% | |
| ACAAACAACCGTTGCTGACG+TGG | - | chr3_4:64899779-64899798 | Msa0514240:CDS | 50.0% | |
| !! | TGAGGTGGTTGGTTTGAACC+CGG | + | chr3_4:64899814-64899833 | None:intergenic | 50.0% |
| AAACACGAAGCTGAGGTGGT+TGG | + | chr3_4:64899825-64899844 | None:intergenic | 50.0% | |
| GCTAAAACACGAAGCTGAGG+TGG | + | chr3_4:64899829-64899848 | None:intergenic | 50.0% | |
| CCAGCTAAAACACGAAGCTG+AGG | + | chr3_4:64899832-64899851 | None:intergenic | 50.0% | |
| !!! | CCTCAGCTTCGTGTTTTAGC+TGG | - | chr3_4:64899829-64899848 | Msa0514240:CDS | 50.0% |
| !!! | CTTCGTGTTTTAGCTGGTGC+TGG | - | chr3_4:64899835-64899854 | Msa0514240:CDS | 50.0% |
| !! | GCTGGTTCTGTTTCTGGTTC+GGG | - | chr3_4:64899853-64899872 | Msa0514240:intron | 50.0% |
| TGGTTGTAACGTTCCGGTTC+AGG | - | chr3_4:64899897-64899916 | Msa0514240:intron | 50.0% | |
| !! | CCATCATAAACCGGTTCGCT+GGG | + | chr3_4:64899930-64899949 | None:intergenic | 50.0% |
| !! | TCCATCATAAACCGGTTCGC+TGG | + | chr3_4:64899931-64899950 | None:intergenic | 50.0% |
| ! | CGAACCGGTTTATGATGGAG+TGG | - | chr3_4:64899932-64899951 | Msa0514240:intron | 50.0% |
| GAGTGGTTCGATATTCGAGG+CGG | - | chr3_4:64899949-64899968 | Msa0514240:intron | 50.0% | |
| AGTGGTTCGATATTCGAGGC+GGG | - | chr3_4:64899950-64899969 | Msa0514240:intron | 50.0% | |
| AGAGGAGACCACACTACCAT+TGG | + | chr3_4:64900386-64900405 | None:intergenic | 50.0% | |
| ! | CTCAAACGCTGTGTTGATGC+TGG | - | chr3_4:64899291-64899310 | Msa0514240:CDS | 50.0% |
| CGCGCCGTCTTTGTATTCAT+TGG | - | chr3_4:64899525-64899544 | Msa0514240:CDS | 50.0% | |
| AACGACAAAGACTTACGCGC+CGG | - | chr3_4:64899583-64899602 | Msa0514240:CDS | 50.0% | |
| GCATTTCTCGGTCACATCGA+CGG | - | chr3_4:64899628-64899647 | Msa0514240:CDS | 50.0% | |
| ATCGACGGTTTACGTGAGCT+TGG | - | chr3_4:64899643-64899662 | Msa0514240:CDS | 50.0% | |
| ACAAACAACCGTTGCTGACG+TGG | - | chr3_4:64899779-64899798 | Msa0514240:CDS | 50.0% | |
| !! | TGAGGTGGTTGGTTTGAACC+CGG | + | chr3_4:64899814-64899833 | None:intergenic | 50.0% |
| AAACACGAAGCTGAGGTGGT+TGG | + | chr3_4:64899825-64899844 | None:intergenic | 50.0% | |
| GCTAAAACACGAAGCTGAGG+TGG | + | chr3_4:64899829-64899848 | None:intergenic | 50.0% | |
| CCAGCTAAAACACGAAGCTG+AGG | + | chr3_4:64899832-64899851 | None:intergenic | 50.0% | |
| !!! | CCTCAGCTTCGTGTTTTAGC+TGG | - | chr3_4:64899829-64899848 | Msa0514240:CDS | 50.0% |
| !!! | CTTCGTGTTTTAGCTGGTGC+TGG | - | chr3_4:64899835-64899854 | Msa0514240:CDS | 50.0% |
| !! | GCTGGTTCTGTTTCTGGTTC+GGG | - | chr3_4:64899853-64899872 | Msa0514240:intron | 50.0% |
| TGGTTGTAACGTTCCGGTTC+AGG | - | chr3_4:64899897-64899916 | Msa0514240:intron | 50.0% | |
| !! | CCATCATAAACCGGTTCGCT+GGG | + | chr3_4:64899930-64899949 | None:intergenic | 50.0% |
| !! | TCCATCATAAACCGGTTCGC+TGG | + | chr3_4:64899931-64899950 | None:intergenic | 50.0% |
| ! | CGAACCGGTTTATGATGGAG+TGG | - | chr3_4:64899932-64899951 | Msa0514240:intron | 50.0% |
| GAGTGGTTCGATATTCGAGG+CGG | - | chr3_4:64899949-64899968 | Msa0514240:intron | 50.0% | |
| AGTGGTTCGATATTCGAGGC+GGG | - | chr3_4:64899950-64899969 | Msa0514240:intron | 50.0% | |
| AGAGGAGACCACACTACCAT+TGG | + | chr3_4:64900386-64900405 | None:intergenic | 50.0% | |
| GCGTGCACATAAAGCCACAC+CGG | + | chr3_4:64899605-64899624 | None:intergenic | 55.0% | |
| TGTGCACGCGCTGCATTTCT+CGG | - | chr3_4:64899616-64899635 | Msa0514240:CDS | 55.0% | |
| ! | GCTGACGTGGAGTGTTAACC+CGG | - | chr3_4:64899792-64899811 | Msa0514240:CDS | 55.0% |
| ! | CTGACGTGGAGTGTTAACCC+GGG | - | chr3_4:64899793-64899812 | Msa0514240:CDS | 55.0% |
| !! | GAGGTGGTTGGTTTGAACCC+GGG | + | chr3_4:64899813-64899832 | None:intergenic | 55.0% |
| !! | GCTGGTGCTGGTTCTGTTTC+TGG | - | chr3_4:64899847-64899866 | Msa0514240:intron | 55.0% |
| ! | CCCAGCGAACCGGTTTATGA+TGG | - | chr3_4:64899927-64899946 | Msa0514240:intron | 55.0% |
| ! | GATATTCGAGGCGGGTTTCC+TGG | - | chr3_4:64899958-64899977 | Msa0514240:intron | 55.0% |
| CATAACCTCATACCCGGTCC+AGG | + | chr3_4:64899979-64899998 | None:intergenic | 55.0% | |
| GTTGTGGAAGGCCTGAGACA+AGG | - | chr3_4:64900010-64900029 | Msa0514240:CDS | 55.0% | |
| GCGCTTGTCAAGCGCTTGAT+TGG | - | chr3_4:64900085-64900104 | Msa0514240:CDS | 55.0% | |
| TCCTCTAACCACCTCTCCAC+TGG | + | chr3_4:64900138-64900157 | None:intergenic | 55.0% | |
| AGTGGAGAGGTGGTTAGAGG+AGG | - | chr3_4:64900137-64900156 | Msa0514240:intron | 55.0% | |
| GAGGAGGAGGAACATGTTGC+CGG | - | chr3_4:64900153-64900172 | Msa0514240:intron | 55.0% | |
| GAGGAACATGTTGCCGGTGA+AGG | - | chr3_4:64900159-64900178 | Msa0514240:intron | 55.0% | |
| CATGTTGCCGGTGAAGGTGA+CGG | - | chr3_4:64900165-64900184 | Msa0514240:intron | 55.0% | |
| AACACCACCGTCACCTTCAC+CGG | + | chr3_4:64900175-64900194 | None:intergenic | 55.0% | |
| GCGTGCACATAAAGCCACAC+CGG | + | chr3_4:64899605-64899624 | None:intergenic | 55.0% | |
| TGTGCACGCGCTGCATTTCT+CGG | - | chr3_4:64899616-64899635 | Msa0514240:CDS | 55.0% | |
| ! | GCTGACGTGGAGTGTTAACC+CGG | - | chr3_4:64899792-64899811 | Msa0514240:CDS | 55.0% |
| ! | CTGACGTGGAGTGTTAACCC+GGG | - | chr3_4:64899793-64899812 | Msa0514240:CDS | 55.0% |
| !! | GAGGTGGTTGGTTTGAACCC+GGG | + | chr3_4:64899813-64899832 | None:intergenic | 55.0% |
| !! | GCTGGTGCTGGTTCTGTTTC+TGG | - | chr3_4:64899847-64899866 | Msa0514240:intron | 55.0% |
| ! | CCCAGCGAACCGGTTTATGA+TGG | - | chr3_4:64899927-64899946 | Msa0514240:intron | 55.0% |
| ! | GATATTCGAGGCGGGTTTCC+TGG | - | chr3_4:64899958-64899977 | Msa0514240:intron | 55.0% |
| CATAACCTCATACCCGGTCC+AGG | + | chr3_4:64899979-64899998 | None:intergenic | 55.0% | |
| GTTGTGGAAGGCCTGAGACA+AGG | - | chr3_4:64900010-64900029 | Msa0514240:CDS | 55.0% | |
| GCGCTTGTCAAGCGCTTGAT+TGG | - | chr3_4:64900085-64900104 | Msa0514240:CDS | 55.0% | |
| TCCTCTAACCACCTCTCCAC+TGG | + | chr3_4:64900138-64900157 | None:intergenic | 55.0% | |
| AGTGGAGAGGTGGTTAGAGG+AGG | - | chr3_4:64900137-64900156 | Msa0514240:intron | 55.0% | |
| GAGGAGGAGGAACATGTTGC+CGG | - | chr3_4:64900153-64900172 | Msa0514240:intron | 55.0% | |
| GAGGAACATGTTGCCGGTGA+AGG | - | chr3_4:64900159-64900178 | Msa0514240:intron | 55.0% | |
| CATGTTGCCGGTGAAGGTGA+CGG | - | chr3_4:64900165-64900184 | Msa0514240:intron | 55.0% | |
| AACACCACCGTCACCTTCAC+CGG | + | chr3_4:64900175-64900194 | None:intergenic | 55.0% | |
| AGGAAGCGGCGCGTCGTTAA+TGG | - | chr3_4:64899480-64899499 | Msa0514240:CDS | 60.0% | |
| ! | CAAAGACTTACGCGCCGGTG+TGG | - | chr3_4:64899588-64899607 | Msa0514240:CDS | 60.0% |
| GCTGGGTGAGTCTCCTGAAC+CGG | + | chr3_4:64899913-64899932 | None:intergenic | 60.0% | |
| AGGAGACTCACCCAGCGAAC+CGG | - | chr3_4:64899917-64899936 | Msa0514240:intron | 60.0% | |
| GGTTTCCTGGACCGGGTATG+AGG | - | chr3_4:64899971-64899990 | Msa0514240:intron | 60.0% | |
| GCCAGTGGAGAGGTGGTTAG+AGG | - | chr3_4:64900134-64900153 | Msa0514240:intron | 60.0% | |
| GGAGAGGTGGTTAGAGGAGG+AGG | - | chr3_4:64900140-64900159 | Msa0514240:intron | 60.0% | |
| AGGAAGCGGCGCGTCGTTAA+TGG | - | chr3_4:64899480-64899499 | Msa0514240:CDS | 60.0% | |
| ! | CAAAGACTTACGCGCCGGTG+TGG | - | chr3_4:64899588-64899607 | Msa0514240:CDS | 60.0% |
| GCTGGGTGAGTCTCCTGAAC+CGG | + | chr3_4:64899913-64899932 | None:intergenic | 60.0% | |
| AGGAGACTCACCCAGCGAAC+CGG | - | chr3_4:64899917-64899936 | Msa0514240:intron | 60.0% | |
| GGTTTCCTGGACCGGGTATG+AGG | - | chr3_4:64899971-64899990 | Msa0514240:intron | 60.0% | |
| GCCAGTGGAGAGGTGGTTAG+AGG | - | chr3_4:64900134-64900153 | Msa0514240:intron | 60.0% | |
| GGAGAGGTGGTTAGAGGAGG+AGG | - | chr3_4:64900140-64900159 | Msa0514240:intron | 60.0% | |
| ! | TCGAGGCGGGTTTCCTGGAC+CGG | - | chr3_4:64899963-64899982 | Msa0514240:intron | 65.0% |
| AGTGTGCGCCAGTGGAGAGG+TGG | - | chr3_4:64900127-64900146 | Msa0514240:intron | 65.0% | |
| ! | GTTGCCGGTGAAGGTGACGG+TGG | - | chr3_4:64900168-64900187 | Msa0514240:intron | 65.0% |
| ! | TCGAGGCGGGTTTCCTGGAC+CGG | - | chr3_4:64899963-64899982 | Msa0514240:intron | 65.0% |
| AGTGTGCGCCAGTGGAGAGG+TGG | - | chr3_4:64900127-64900146 | Msa0514240:intron | 65.0% | |
| ! | GTTGCCGGTGAAGGTGACGG+TGG | - | chr3_4:64900168-64900187 | Msa0514240:intron | 65.0% |
| ! | CGAGGCGGGTTTCCTGGACC+GGG | - | chr3_4:64899964-64899983 | Msa0514240:intron | 70.0% |
| CAAGGCGGAGTGTGCGCCAG+TGG | - | chr3_4:64900119-64900138 | Msa0514240:intron | 70.0% | |
| CGGAGTGTGCGCCAGTGGAG+AGG | - | chr3_4:64900124-64900143 | Msa0514240:intron | 70.0% | |
| ! | CGAGGCGGGTTTCCTGGACC+GGG | - | chr3_4:64899964-64899983 | Msa0514240:intron | 70.0% |
| CAAGGCGGAGTGTGCGCCAG+TGG | - | chr3_4:64900119-64900138 | Msa0514240:intron | 70.0% | |
| CGGAGTGTGCGCCAGTGGAG+AGG | - | chr3_4:64900124-64900143 | Msa0514240:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 64898826 | 64900490 | 64898826 | ID=Msa0514240;Name=Msa0514240 |
| chr3_4 | mRNA | 64898826 | 64900490 | 64898826 | ID=Msa0514240-mRNA-1;Parent=Msa0514240;Name=Msa0514240-mRNA-1;_AED=0.04;_eAED=0.04;_QI=48|1|1|1|1|1|3|263|382 |
| chr3_4 | exon | 64898826 | 64899862 | 64898826 | ID=Msa0514240-mRNA-1:exon:16441;Parent=Msa0514240-mRNA-1 |
| chr3_4 | exon | 64899972 | 64900134 | 64899972 | ID=Msa0514240-mRNA-1:exon:16440;Parent=Msa0514240-mRNA-1 |
| chr3_4 | exon | 64900231 | 64900490 | 64900231 | ID=Msa0514240-mRNA-1:exon:16439;Parent=Msa0514240-mRNA-1 |
| chr3_4 | five_prime_UTR | 64900443 | 64900490 | 64900443 | ID=Msa0514240-mRNA-1:five_prime_utr;Parent=Msa0514240-mRNA-1 |
| chr3_4 | CDS | 64900231 | 64900442 | 64900231 | ID=Msa0514240-mRNA-1:cds;Parent=Msa0514240-mRNA-1 |
| chr3_4 | CDS | 64899972 | 64900134 | 64899972 | ID=Msa0514240-mRNA-1:cds;Parent=Msa0514240-mRNA-1 |
| chr3_4 | CDS | 64899089 | 64899862 | 64899089 | ID=Msa0514240-mRNA-1:cds;Parent=Msa0514240-mRNA-1 |
| chr3_4 | three_prime_UTR | 64898826 | 64899088 | 64898826 | ID=Msa0514240-mRNA-1:three_prime_utr;Parent=Msa0514240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
