AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469930 MtrunA17_Chr8g0364251 85.630 508 19 4 1 454 1 508 0.0 846
Msa0469930 MtrunA17_Chr3g0124911 89.189 111 3 1 454 555 53 163 3.45e-63 204
Msa0469930 MtrunA17_Chr6g0449741 27.202 386 222 13 91 461 249 590 4.05e-24 106
Msa0469930 MtrunA17_Chr3g0145781 27.073 410 218 18 72 453 119 475 8.47e-23 102
Msa0469930 MtrunA17_Chr4g0076491 27.320 388 221 14 91 461 287 630 3.51e-22 100
Msa0469930 MtrunA17_Chr6g0466611 25.907 386 209 15 91 453 142 473 3.60e-22 100
Msa0469930 MtrunA17_Chr7g0236831 25.935 401 244 16 91 453 163 548 2.56e-20 95.1
Msa0469930 MtrunA17_Chr8g0354761 24.501 351 203 13 114 454 31 329 9.52e-17 82.8
Msa0469930 MtrunA17_Chr1g0192021 28.804 184 122 3 87 265 22 201 1.27e-14 77.0
Msa0469930 MtrunA17_Chr2g0307471 27.174 184 110 5 91 264 91 260 7.59e-14 74.3
Msa0469930 MtrunA17_Chr6g0449911 32.178 202 117 8 69 260 137 328 4.83e-13 72.0
Msa0469930 MtrunA17_Chr3g0098121 30.890 191 106 9 83 264 146 319 3.06e-12 69.3
Msa0469930 MtrunA17_Chr7g0236841 29.609 179 101 6 91 260 10 172 8.09e-12 67.4
Msa0469930 MtrunA17_Chr2g0300291 28.421 190 119 6 84 264 128 309 9.86e-12 67.8
Msa0469930 MtrunA17_Chr6g0483491 29.609 179 101 6 91 260 10 172 1.70e-11 66.6
Msa0469930 MtrunA17_Chr2g0309551 27.957 186 110 6 91 260 109 286 5.34e-11 65.1
Msa0469930 MtrunA17_Chr4g0074521 23.978 367 226 12 101 452 92 420 7.23e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469930 AT1G59990.2 49.778 450 153 11 68 454 58 497 1.19e-132 398
Msa0469930 AT1G59990.1 49.778 450 153 11 68 454 58 497 1.54e-132 398
Msa0469930 AT1G77540.1 56.311 103 36 1 462 555 12 114 1.16e-31 119
Msa0469930 AT1G21770.1 54.455 101 37 1 458 549 1 101 2.34e-31 117
Msa0469930 AT4G09730.1 25.132 378 220 15 92 453 114 444 6.17e-20 94.0
Msa0469930 AT2G40700.1 25.234 428 244 16 79 454 21 424 1.38e-18 89.7
Msa0469930 AT4G34910.1 31.937 191 100 4 91 265 47 223 5.83e-18 87.8
Msa0469930 AT2G33730.1 26.385 379 220 13 91 453 314 649 6.09e-18 88.2
Msa0469930 AT3G18600.1 25.926 378 211 13 89 454 88 408 8.35e-18 87.0
Msa0469930 AT5G60990.1 25.132 378 214 13 91 453 10 333 1.25e-17 86.3
Msa0469930 AT5G08610.1 24.457 368 216 14 103 455 395 715 4.44e-14 75.9
Msa0469930 AT1G12770.2 26.738 187 110 5 91 261 111 286 3.32e-12 69.7
Msa0469930 AT1G12770.1 26.738 187 110 5 91 261 111 286 3.32e-12 69.7
Msa0469930 AT4G16630.1 29.557 203 104 9 76 259 148 330 1.28e-11 68.2
Msa0469930 AT5G05450.1 23.684 380 218 13 97 454 23 352 1.47e-11 67.4
Msa0469930 AT5G08620.1 27.854 219 130 9 58 264 55 257 1.63e-11 67.4
Msa0469930 AT5G14610.5 23.333 450 256 16 26 453 104 486 3.26e-11 66.6
Msa0469930 AT5G14610.6 23.333 450 256 16 26 453 96 478 4.09e-11 66.2
Msa0469930 AT5G14610.2 23.333 450 256 16 26 453 96 478 4.99e-11 65.9
Msa0469930 AT5G14610.4 23.810 378 210 14 90 451 169 484 5.41e-11 65.5

Find 142 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAACTGTGCTTAGATTTA+TGG 0.127378 3_3:-71972137 Msa0469930:three_prime_UTR
TTCAGCTTCGTTATTAATAT+TGG 0.230748 3_3:+71977600 None:intergenic
ATAAAAGAGAAAATCAAATT+TGG 0.246553 3_3:+71972105 None:intergenic
AAATCGGAAGATTTGGATAA+TGG 0.257182 3_3:-71976175 Msa0469930:CDS
TGAAATGAAATATAGGGTTT+TGG 0.258830 3_3:+71979561 None:intergenic
CCTCCTTCCAAGAGAGGTTT+GGG 0.272754 3_3:-71973979 Msa0469930:CDS
GTGAGAGGTGGCGTGATTAA+AGG 0.295264 3_3:+71973930 None:intergenic
TTTCGGTGAGTTGAGGAAAA+TGG 0.305110 3_3:-71974142 Msa0469930:intron
TCAGGCGGATTACTTTATTC+TGG 0.310873 3_3:+71977794 None:intergenic
GTGAAGATATTGGGCTATGC+TGG 0.320318 3_3:-71976094 Msa0469930:intron
CAGTTTAAAATCGGAAGATT+TGG 0.325357 3_3:-71976182 Msa0469930:CDS
GGGTACCGAGGAACATTCTT+TGG 0.339218 3_3:-71978433 Msa0469930:CDS
GAAATGGTGAAATGAAATAT+AGG 0.339392 3_3:+71979554 None:intergenic
TGGACCAGGGATGGCCAATT+CGG 0.344742 3_3:-71978070 Msa0469930:intron
TCCTCCTTCCAAGAGAGGTT+TGG 0.345530 3_3:-71973980 Msa0469930:CDS
AAATGTCTCTCATGTTATTC+AGG 0.347538 3_3:-71975945 Msa0469930:intron
TCTATACCATCTGTGTTGTC+AGG 0.367531 3_3:-71978534 Msa0469930:CDS
CCTTCGTTCCACACGATCAT+TGG 0.380005 3_3:+71974096 None:intergenic
CAATACACCCTCTCTCGTTC+AGG 0.382589 3_3:-71979176 Msa0469930:intron
ATGATATCAGGTTCCCGAAT+TGG 0.387726 3_3:+71978056 None:intergenic
CACAAGTGAAAGAGCTCATA+AGG 0.389324 3_3:-71976216 Msa0469930:CDS
AGCTAAACCCAAACCTCTCT+TGG 0.390910 3_3:+71973972 None:intergenic
AGGAAAATGGCGAATATTGT+TGG 0.391644 3_3:-71974129 Msa0469930:CDS
GAGAGAAGAAGAGAAATTGA+TGG 0.392917 3_3:+71979449 None:intergenic
AACACAGTTACACAGTTGTT+TGG 0.394429 3_3:-71972066 Msa0469930:three_prime_UTR
GGACCAGGGATGGCCAATTC+GGG 0.395111 3_3:-71978069 Msa0469930:intron
CCTGATGCTGAGTGGGTTAG+TGG 0.398187 3_3:-71977442 Msa0469930:CDS
CCCGATAAATTGAGGATTCA+AGG 0.403660 3_3:+71972030 None:intergenic
GAATTCCAAGTTGGGTTCTT+CGG 0.403875 3_3:+71972281 None:intergenic
AACGTTTCGTGGAGTTCAAT+TGG 0.403977 3_3:-71979241 Msa0469930:CDS
CAGCAGACACAGCCCTTTGT+TGG 0.404616 3_3:-71979319 Msa0469930:CDS
CACTACCTGTTTCCCACAAA+TGG 0.406579 3_3:+71978266 None:intergenic
TGCAGCCATTTGTGGGAAAC+AGG 0.410751 3_3:-71978271 Msa0469930:intron
TTAGTTGATTTCTACGACAA+AGG 0.431692 3_3:-71976016 Msa0469930:CDS
CAACGGAAAAGTGTTGGATT+TGG 0.434005 3_3:-71974016 Msa0469930:CDS
AGAAGACAAGAAAGCGTACT+TGG 0.436496 3_3:-71974055 Msa0469930:CDS
TTTCCAGATTGAAGCAAAGA+TGG 0.439295 3_3:-71976258 Msa0469930:intron
TGAATAACATGAGAGACATT+TGG 0.442425 3_3:+71975947 None:intergenic
TCGTCTGACATGGCTTCAAT+TGG 0.443242 3_3:+71977649 None:intergenic
CACATCTAAACTTACTAACT+TGG 0.447812 3_3:-71972230 Msa0469930:exon
AAATGGTGAAATGAAATATA+GGG 0.448148 3_3:+71979555 None:intergenic
CCACTAACCCACTCAGCATC+AGG 0.455201 3_3:+71977442 None:intergenic
TGTGAATCACAGTTTAAAAT+CGG 0.456195 3_3:-71976191 Msa0469930:CDS
TTGCTGAAGATAACGTTTCG+TGG 0.460674 3_3:-71979252 Msa0469930:CDS
ATTGTAATCTTCTGATGAAA+CGG 0.467873 3_3:+71979291 None:intergenic
TTCTTCCGAAGAACCCAACT+TGG 0.470566 3_3:-71972286 Msa0469930:CDS
GTTAGTGCTGCAGCCATTTG+TGG 0.471920 3_3:-71978279 Msa0469930:CDS
GAAGCTGTGGTGAAGATATT+GGG 0.484895 3_3:-71976103 Msa0469930:intron
CTTTGCAAACAAGACAGAAA+TGG 0.486813 3_3:+71979538 None:intergenic
AGAAATGACCTGAACGAGAG+AGG 0.490122 3_3:+71979168 None:intergenic
TCTGCTGTGTTTGACGTGGA+AGG 0.490250 3_3:+71979335 None:intergenic
AATTGTGTGAGCAGGTAGTT+AGG 0.493726 3_3:-71978341 Msa0469930:intron
TATTAGAGAGAGCTCGAGAA+AGG 0.494225 3_3:+71979206 None:intergenic
ATGGCGAATATTGTTGGAAG+TGG 0.496371 3_3:-71974123 Msa0469930:CDS
GAATTGCACGTTGGATGAGC+GGG 0.497408 3_3:-71976047 Msa0469930:CDS
GGTGTTGTCACAATGATATC+AGG 0.504804 3_3:+71978044 None:intergenic
GCAGCTACACTTCCGGTGAA+TGG 0.505831 3_3:-71977502 Msa0469930:intron
AAGCACGAGCAGAACTCTCC+TGG 0.509002 3_3:+71978377 None:intergenic
TGAAGATATTGGGCTATGCT+GGG 0.514289 3_3:-71976093 Msa0469930:intron
CGTTGATAGAAGACGCCGCA+TGG 0.515325 3_3:-71977997 Msa0469930:CDS
GTAGTTATTGCTGCAGAGAC+CGG 0.517794 3_3:-71978504 Msa0469930:CDS
TCAAGAAAACAAGAAGAGAC+TGG 0.518017 3_3:-71977573 Msa0469930:CDS
TAGAGACAACGGAAAAGTGT+TGG 0.519052 3_3:-71974022 Msa0469930:CDS
TCCTCTCATTGATAAGCTGA+GGG 0.520061 3_3:-71978454 Msa0469930:CDS
TACACCACAGAATTCCAAGT+TGG 0.522324 3_3:+71972272 None:intergenic
AAGAAGTCTCTCCGCCGGCC+AGG 0.524452 3_3:-71978395 Msa0469930:CDS
CTCTTTCACTTGTGTATCAA+CGG 0.530314 3_3:+71976225 None:intergenic
TATGCATGGTGTTAAATATG+TGG 0.531983 3_3:-71977970 Msa0469930:intron
AGACGAAGACGAAGATAAAG+TGG 0.535109 3_3:+71979399 None:intergenic
ATCTTCATTGTCACAATCCA+AGG 0.537346 3_3:-71977414 Msa0469930:intron
ACACCACAGAATTCCAAGTT+GGG 0.537952 3_3:+71972273 None:intergenic
TATGTTCCTCCTTCCAAGAG+AGG 0.538765 3_3:-71973985 Msa0469930:CDS
GTGAATGGAAAGAAAACAGC+GGG 0.540547 3_3:-71977487 Msa0469930:CDS
AGAAATTGATGGTAGCGAAT+CGG 0.548812 3_3:+71979460 None:intergenic
TGAAACGGCGCTTCCAACAA+AGG 0.551644 3_3:+71979306 None:intergenic
TGATGCAGCTGCTCGTGGCG+TGG 0.557135 3_3:-71975975 Msa0469930:CDS
ACATGATTGAGAAGAGCAGC+AGG 0.557430 3_3:+71978023 None:intergenic
TTCAACAGCCTCAACTGTGT+TGG 0.557717 3_3:+71976123 None:intergenic
TGTAGCCGTGTGTGGTTAAG+TGG 0.558777 3_3:-71972173 Msa0469930:three_prime_UTR
GAAATGACCTGAACGAGAGA+GGG 0.559297 3_3:+71979169 None:intergenic
ACCATCTGTGTTGTCAGGGA+AGG 0.560442 3_3:-71978529 Msa0469930:CDS
CTATACCATCTGTGTTGTCA+GGG 0.560940 3_3:-71978533 Msa0469930:CDS
CTGCTGTGTTTGACGTGGAA+GGG 0.561981 3_3:+71979336 None:intergenic
TTAGTGCTGCAGCCATTTGT+GGG 0.562083 3_3:-71978278 Msa0469930:CDS
GAAACGGCGCTTCCAACAAA+GGG 0.565869 3_3:+71979307 None:intergenic
TTCCTCTCATTGATAAGCTG+AGG 0.566977 3_3:-71978455 Msa0469930:CDS
ACAAGTGAAAGAGCTCATAA+GGG 0.567146 3_3:-71976215 Msa0469930:CDS
ATTAGAGAGAGCTCGAGAAA+GGG 0.568016 3_3:+71979207 None:intergenic
ATCATCCTCCTCGTCTGACA+TGG 0.569854 3_3:+71977639 None:intergenic
ATTGCTGCAGAGACCGGCAG+TGG 0.572069 3_3:-71978498 Msa0469930:CDS
ACTGTATGTCTTACCACTGC+CGG 0.574756 3_3:+71978485 None:intergenic
TGTGCTTAGATTTATGGCAC+AGG 0.575508 3_3:-71972131 Msa0469930:three_prime_UTR
GAAGATTTGGATAATGGTGG+TGG 0.580546 3_3:-71976169 Msa0469930:CDS
GATGACAGATAAGGAGTGAG+AGG 0.581743 3_3:+71973915 None:intergenic
GTGTGAGCAGGTAGTTAGGA+TGG 0.586604 3_3:-71978337 Msa0469930:intron
AGCAGAACTCTCCTGGCCGG+CGG 0.588505 3_3:+71978384 None:intergenic
CGCCGCATGGAATTTATGCA+TGG 0.588650 3_3:-71977984 Msa0469930:CDS
TCTCTTGGAAGGAGGAACAT+AGG 0.588928 3_3:+71973987 None:intergenic
CATCAAAATGTAGCCGTGTG+TGG 0.590469 3_3:-71972181 Msa0469930:three_prime_UTR
CCAATGATCGTGTGGAACGA+AGG 0.594089 3_3:-71974096 Msa0469930:CDS
AAACCCAAACCTCTCTTGGA+AGG 0.596725 3_3:+71973976 None:intergenic
TGATAAAGAAGTCTCTCCGC+CGG 0.597198 3_3:-71978400 Msa0469930:CDS
ACAGGTGGGGATGACAGATA+AGG 0.600825 3_3:+71973906 None:intergenic
CATGTTTCCTGATGCTGAGT+GGG 0.603761 3_3:-71977449 Msa0469930:CDS
CAAAGCCACTTAACCACACA+CGG 0.605602 3_3:+71972168 None:intergenic
GATTAAAGGCAGCGAGAGTG+AGG 0.607157 3_3:+71973944 None:intergenic
CCCCTCAGCTTATCAATGAG+AGG 0.609403 3_3:+71978453 None:intergenic
TCGGAAGATTTGGATAATGG+TGG 0.610027 3_3:-71976172 Msa0469930:CDS
TGTACTGATGCAGCTGCTCG+TGG 0.611822 3_3:-71975980 Msa0469930:CDS
AACATCCAAAGAATGTTCCT+CGG 0.612515 3_3:+71978428 None:intergenic
TGAAGCCATGTCAGACGAGG+AGG 0.613709 3_3:-71977644 Msa0469930:CDS
AGAATTGCACGTTGGATGAG+CGG 0.619703 3_3:-71976048 Msa0469930:CDS
TCCTTCCCTGACAACACAGA+TGG 0.620342 3_3:+71978528 None:intergenic
AAGCTGATATGCTTCTCTGT+GGG 0.625330 3_3:-71977822 Msa0469930:CDS
CCCAAACCTCTCTTGGAAGG+AGG 0.625785 3_3:+71973979 None:intergenic
TGATGCTTCAGAAGGTGAAG+AGG 0.626535 3_3:-71977677 Msa0469930:intron
AATGGCTGCAGCACTAACAA+TGG 0.628494 3_3:+71978284 None:intergenic
GACGAAGACGAAGATAAAGT+GGG 0.628815 3_3:+71979400 None:intergenic
ACGAGCAGAACTCTCCTGGC+CGG 0.632890 3_3:+71978381 None:intergenic
GTTGATTTCTACGACAAAGG+TGG 0.637199 3_3:-71976013 Msa0469930:CDS
GACAGATAAGGAGTGAGAGG+TGG 0.640189 3_3:+71973918 None:intergenic
GAACCCAACTTGGAATTCTG+TGG 0.640467 3_3:-71972276 Msa0469930:CDS
GTGGAAGTCCAATGATCGTG+TGG 0.644598 3_3:-71974104 Msa0469930:CDS
CGAGGAGGATGATGATAACG+AGG 0.644815 3_3:-71977629 Msa0469930:CDS
AATTGAAGCCATGTCAGACG+AGG 0.652612 3_3:-71977647 Msa0469930:CDS
TGATAAGCTGAGGGGTACCG+AGG 0.652680 3_3:-71978445 Msa0469930:CDS
GAAGAGACTGGAGAAGAGTG+AGG 0.655513 3_3:-71977561 Msa0469930:CDS
GTTTCATCAGAAGATTACAA+TGG 0.662414 3_3:-71979289 Msa0469930:CDS
TGTGTCTGCTGTGTTTGACG+TGG 0.669758 3_3:+71979331 None:intergenic
AGTTGAGGCTGTTGAAGCTG+TGG 0.675682 3_3:-71976116 Msa0469930:intron
TCTGTGGTGTACAAAGAGAG+TGG 0.676170 3_3:-71972260 Msa0469930:CDS
TTATCATAAGAATTGCACGT+TGG 0.677936 3_3:-71976056 Msa0469930:CDS
GAAGCTGATATGCTTCTCTG+TGG 0.683524 3_3:-71977823 Msa0469930:CDS
GAGTATGTCCTTAGAGACAA+CGG 0.688494 3_3:-71974033 Msa0469930:CDS
ACATGTTTCCTGATGCTGAG+TGG 0.696080 3_3:-71977450 Msa0469930:CDS
CACCATGCATAAATTCCATG+CGG 0.706774 3_3:+71977982 None:intergenic
AGGATGGCTAATAGTCTCTG+TGG 0.708474 3_3:-71978321 Msa0469930:CDS
TGTGGAACGAAGGAACAAAG+AGG 0.708688 3_3:-71974086 Msa0469930:CDS
GGTGTTTGCCAACACAGTTG+AGG 0.709075 3_3:-71976131 Msa0469930:CDS
TGGTGGCATTCATAGAACAA+TGG 0.741830 3_3:-71976152 Msa0469930:CDS
CCTCTCATTGATAAGCTGAG+GGG 0.743401 3_3:-71978453 Msa0469930:CDS
GGTGAATGGAAAGAAAACAG+CGG 0.768400 3_3:-71977488 Msa0469930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAACTAATTGAAAA+TGG - chr3_3:71972580-71972599 Msa0469930:intron 10.0%
!! AAATATAAACATACATAAAT+AGG + chr3_3:71973764-71973783 None:intergenic 10.0%
!!! TATATTTTCTAATTTCTAAT+TGG - chr3_3:71973777-71973796 Msa0469930:intron 10.0%
!!! TAAATTTTGTAATTAATCAA+CGG + chr3_3:71976819-71976838 None:intergenic 10.0%
!!! TTTTATTTTTATATAACCTT+AGG - chr3_3:71977147-71977166 Msa0469930:intron 10.0%
!! ATAAGCAAATTAATACAATA+AGG + chr3_3:71972865-71972884 None:intergenic 15.0%
!!! TTTGTTTTTATTCTTCTATT+CGG - chr3_3:71973022-71973041 Msa0469930:intron 15.0%
!! TTATAGTTATATGAAATTTG+TGG - chr3_3:71973451-71973470 Msa0469930:intron 15.0%
!!! ATTGATAATAAGTACAAAAA+GGG + chr3_3:71974260-71974279 None:intergenic 15.0%
!!! TATTGATAATAAGTACAAAA+AGG + chr3_3:71974261-71974280 None:intergenic 15.0%
!! TATAACTTATAACATGTAAA+AGG + chr3_3:71975725-71975744 None:intergenic 15.0%
!! TAATTAAACTTATAGGAATT+AGG - chr3_3:71976037-71976056 Msa0469930:CDS 15.0%
!!! TAGATAATTTTCTTTGTAAT+TGG - chr3_3:71976295-71976314 Msa0469930:intron 15.0%
!! ATGTAATATACATTATTTCA+TGG - chr3_3:71976959-71976978 Msa0469930:intron 15.0%
!! ATAATAAAATATAACACCTA+AGG + chr3_3:71977166-71977185 None:intergenic 15.0%
!! AAATTTACAAAAATCCATTT+CGG + chr3_3:71977825-71977844 None:intergenic 15.0%
!!! AAATGGATTTTTGTAAATTT+AGG - chr3_3:71977825-71977844 Msa0469930:CDS 15.0%
!!! TTGTTTGATATGTTTAAAAT+AGG + chr3_3:71978308-71978327 None:intergenic 15.0%
!! ATATTGATATTCTTCTATTA+CGG + chr3_3:71978595-71978614 None:intergenic 15.0%
!! ATAAAAGAGAAAATCAAATT+TGG + chr3_3:71979533-71979552 None:intergenic 15.0%
!! AAATGGTGAAATGAAATATA+GGG + chr3_3:71972083-71972102 None:intergenic 20.0%
!! TAAAAAAACAGAAATATAGC+AGG + chr3_3:71972513-71972532 None:intergenic 20.0%
!!! AATCAAATTTAGAACATACA+GGG + chr3_3:71972561-71972580 None:intergenic 20.0%
!!! AAATCAAATTTAGAACATAC+AGG + chr3_3:71972562-71972581 None:intergenic 20.0%
!!! TTTTCTAATTTCTAATTGGT+AGG - chr3_3:71973781-71973800 Msa0469930:intron 20.0%
!!! TTGATAATAAGTACAAAAAG+GGG + chr3_3:71974259-71974278 None:intergenic 20.0%
!!! ATTCAATTTTCTTTTCTACT+TGG - chr3_3:71974285-71974304 Msa0469930:intron 20.0%
!! AACTAATTGTATGCTAATAA+TGG + chr3_3:71974979-71974998 None:intergenic 20.0%
!!! CTTAAATTTTGAAAGTTCTT+GGG - chr3_3:71975764-71975783 Msa0469930:intron 20.0%
!! TCTATAAAAATGCACAAATT+CGG + chr3_3:71976279-71976298 None:intergenic 20.0%
!! GGATTCAATTAAAATAAGAA+CGG - chr3_3:71976316-71976335 Msa0469930:intron 20.0%
!! ACAAAAGTAAAATTGTTTGT+TGG - chr3_3:71976420-71976439 Msa0469930:intron 20.0%
!! CAAAAGTAAAATTGTTTGTT+GGG - chr3_3:71976421-71976440 Msa0469930:intron 20.0%
!! ATATTACATAACATGATTTG+AGG + chr3_3:71976948-71976967 None:intergenic 20.0%
!!! GATTTTTGTAAATTTAGGTT+AGG - chr3_3:71977830-71977849 Msa0469930:CDS 20.0%
!!! TCAAATAATTTTATTCCACT+TGG + chr3_3:71977996-71978015 None:intergenic 20.0%
!!! TTTTAGTTACTATAGTCTAT+AGG - chr3_3:71978134-71978153 Msa0469930:intron 20.0%
!!! CAATAATAGTTGTCAATTTT+AGG + chr3_3:71978390-71978409 None:intergenic 20.0%
!!! AGTATGTTTCTAATATTTGA+CGG + chr3_3:71978477-71978496 None:intergenic 20.0%
!! TCAAGTTTGAAAATGAAATT+GGG + chr3_3:71978537-71978556 None:intergenic 20.0%
!!! TTCAAGTTTGAAAATGAAAT+TGG + chr3_3:71978538-71978557 None:intergenic 20.0%
!!! TTTTACAAGAATTAAACTTG+TGG + chr3_3:71978636-71978655 None:intergenic 20.0%
!!! GATTTTTTGAACTAAATTTG+TGG - chr3_3:71978658-71978677 Msa0469930:intron 20.0%
!! TAACAAATGTTTGTAAGTTA+AGG + chr3_3:71979130-71979149 None:intergenic 20.0%
!! GAAATGAAATATAGGGTTTT+GGG + chr3_3:71972076-71972095 None:intergenic 25.0%
!! TGAAATGAAATATAGGGTTT+TGG + chr3_3:71972077-71972096 None:intergenic 25.0%
! GAAATGGTGAAATGAAATAT+AGG + chr3_3:71972084-71972103 None:intergenic 25.0%
! ATTGTAATCTTCTGATGAAA+CGG + chr3_3:71972347-71972366 None:intergenic 25.0%
!!! TGATTAATTAGCTTTAGTCA+AGG - chr3_3:71972610-71972629 Msa0469930:intron 25.0%
!!! TTACTCGGACTTTTTTTTAT+TGG - chr3_3:71972678-71972697 Msa0469930:intron 25.0%
! GGTAAGTTTAGATTATAACT+TGG - chr3_3:71972963-71972982 Msa0469930:intron 25.0%
!!! TTATTTCCTGATGCTATTTT+TGG - chr3_3:71973414-71973433 Msa0469930:intron 25.0%
!!! TCAGCACTAAAAATCTTTTT+TGG - chr3_3:71973545-71973564 Msa0469930:intron 25.0%
!!! TAAAAATCTTTTTTGGACCA+GGG - chr3_3:71973552-71973571 Msa0469930:intron 25.0%
! AAGACATATGAACTTAACAT+TGG - chr3_3:71973736-71973755 Msa0469930:intron 25.0%
! TTCAGCTTCGTTATTAATAT+TGG + chr3_3:71974038-71974057 None:intergenic 25.0%
! TGATAATAAGTACAAAAAGG+GGG + chr3_3:71974258-71974277 None:intergenic 25.0%
! CAAACATTACTAATTTACCA+AGG - chr3_3:71974431-71974450 Msa0469930:intron 25.0%
! TAATTTACCAAGGTAAAAGA+TGG - chr3_3:71974441-71974460 Msa0469930:intron 25.0%
! TTCTTCAATTTAAGTAAACC+TGG + chr3_3:71974575-71974594 None:intergenic 25.0%
!!! TGATTGTTTTTCAGTTTGAA+TGG - chr3_3:71974636-71974655 Msa0469930:intron 25.0%
! TTCATCTGTCTCAAAATAAT+AGG - chr3_3:71974819-71974838 Msa0469930:intron 25.0%
! TTCTTATACAAATACCACAT+AGG - chr3_3:71975018-71975037 Msa0469930:intron 25.0%
! AGAATAAAATAGAAAGAGTG+TGG + chr3_3:71975091-71975110 None:intergenic 25.0%
! TTAGTAGTTGTTAGTTAGAA+GGG + chr3_3:71975138-71975157 None:intergenic 25.0%
!! TGTGAATCACAGTTTAAAAT+CGG - chr3_3:71975444-71975463 Msa0469930:intron 25.0%
!!! GCTTAAATTTTGAAAGTTCT+TGG - chr3_3:71975763-71975782 Msa0469930:intron 25.0%
! AATGATTGACAAACAACAAA+GGG + chr3_3:71976209-71976228 None:intergenic 25.0%
! AAATGATTGACAAACAACAA+AGG + chr3_3:71976210-71976229 None:intergenic 25.0%
!! TGTTGTTTGTCAATCATTTA+AGG - chr3_3:71976211-71976230 Msa0469930:CDS 25.0%
!!! CATTTTGCAGTTTTATTTCT+GGG + chr3_3:71976238-71976257 None:intergenic 25.0%
! CAAATCAAGAGAAATGATTA+GGG + chr3_3:71976515-71976534 None:intergenic 25.0%
! ACAAATCAAGAGAAATGATT+AGG + chr3_3:71976516-71976535 None:intergenic 25.0%
! AGAATTATTAGAAGAAGCAA+AGG + chr3_3:71976601-71976620 None:intergenic 25.0%
! TCTTCTAATAATTCTTCAGA+CGG - chr3_3:71976606-71976625 Msa0469930:intron 25.0%
!! GTTTATAATTAAGGGTACAA+TGG + chr3_3:71976786-71976805 None:intergenic 25.0%
! CGGATTGAGTTTATAATTAA+GGG + chr3_3:71976794-71976813 None:intergenic 25.0%
! CCTTAATTATAAACTCAATC+CGG - chr3_3:71976792-71976811 Msa0469930:intron 25.0%
!!! AAATTTAAAAAGCACTTGCA+AGG - chr3_3:71976832-71976851 Msa0469930:intron 25.0%
! ACGAGAAAATAAAAAAGAAG+GGG + chr3_3:71977785-71977804 None:intergenic 25.0%
! GACGAGAAAATAAAAAAGAA+GGG + chr3_3:71977786-71977805 None:intergenic 25.0%
! AGACGAGAAAATAAAAAAGA+AGG + chr3_3:71977787-71977806 None:intergenic 25.0%
! AAGATTATATGAGATGACTT+AGG - chr3_3:71977853-71977872 Msa0469930:intron 25.0%
! AATGATGTGAAATGTTTGTT+TGG - chr3_3:71977926-71977945 Msa0469930:intron 25.0%
!!! ATGGAAAATAGTTGATGAAA+TGG - chr3_3:71977968-71977987 Msa0469930:intron 25.0%
! GGAAAAATATGTATTGGATT+TGG - chr3_3:71978075-71978094 Msa0469930:intron 25.0%
!!! ATAGTTGTCAATTTTAGGTT+TGG + chr3_3:71978385-71978404 None:intergenic 25.0%
!! ATGTGAATGATACAATTTTC+AGG - chr3_3:71978451-71978470 Msa0469930:CDS 25.0%
! AAGTTTGAAAATGAAATTGG+GGG + chr3_3:71978535-71978554 None:intergenic 25.0%
! CAAGTTTGAAAATGAAATTG+GGG + chr3_3:71978536-71978555 None:intergenic 25.0%
! AAAATTTCCCGTTATATTTC+AGG + chr3_3:71978815-71978834 None:intergenic 25.0%
!! TACATTCTTTTATACACGTT+GGG + chr3_3:71978840-71978859 None:intergenic 25.0%
! TGTATAAAAGAATGTAGGAT+TGG - chr3_3:71978844-71978863 Msa0469930:intron 25.0%
! TACTTGAGAATGCAAAATTT+AGG - chr3_3:71978979-71978998 Msa0469930:intron 25.0%
! ACTTGAGAATGCAAAATTTA+GGG - chr3_3:71978980-71978999 Msa0469930:intron 25.0%
! TTGTAATCGATAAGCATAAA+AGG + chr3_3:71979103-71979122 None:intergenic 25.0%
! TATGTGAGTAAAAGCTTAAA+GGG + chr3_3:71979174-71979193 None:intergenic 25.0%
! CTGATAACAAAGTTAAAATG+GGG + chr3_3:71979223-71979242 None:intergenic 25.0%
! GCTGATAACAAAGTTAAAAT+GGG + chr3_3:71979224-71979243 None:intergenic 25.0%
! TGCTGATAACAAAGTTAAAA+TGG + chr3_3:71979225-71979244 None:intergenic 25.0%
!!! TAATGATTTTTGTTGTTGAC+AGG - chr3_3:71979320-71979339 Msa0469930:CDS 25.0%
! AATAACTGTGCTTAGATTTA+TGG - chr3_3:71979498-71979517 Msa0469930:CDS 25.0%
!! GAATCGGTGAATTTTGAAAA+TGG + chr3_3:71972162-71972181 None:intergenic 30.0%
GTTTCATCAGAAGATTACAA+TGG - chr3_3:71972346-71972365 Msa0469930:intron 30.0%
AAAACAGAAATATAGCAGGA+AGG + chr3_3:71972509-71972528 None:intergenic 30.0%
TTTGTTGGAACAACTTTACT+CGG - chr3_3:71972663-71972682 Msa0469930:intron 30.0%
TTGTAGTTATCAGTTTCAAG+TGG + chr3_3:71972725-71972744 None:intergenic 30.0%
ACTTGTGTCAAGAATGAAAT+TGG - chr3_3:71972941-71972960 Msa0469930:intron 30.0%
CTTGTGTCAAGAATGAAATT+GGG - chr3_3:71972942-71972961 Msa0469930:intron 30.0%
AGATAACCAAAAATAGCATC+AGG + chr3_3:71973423-71973442 None:intergenic 30.0%
!!! CTAAAAATCTTTTTTGGACC+AGG - chr3_3:71973551-71973570 Msa0469930:intron 30.0%
! TATGCATGGTGTTAAATATG+TGG - chr3_3:71973665-71973684 Msa0469930:intron 30.0%
! ACAAGAGTTTTTCATCATAG+CGG + chr3_3:71973877-71973896 None:intergenic 30.0%
TGGGCAATAAATTCTAAACT+TGG + chr3_3:71974485-71974504 None:intergenic 30.0%
TATTCATCTAAGTCTCTCAT+GGG + chr3_3:71974504-71974523 None:intergenic 30.0%
!! TAGTATGTCACTTTGTAACA+AGG - chr3_3:71974909-71974928 Msa0469930:intron 30.0%
GTTAAACAGTGAATTTGAGT+GGG + chr3_3:71975066-71975085 None:intergenic 30.0%
CACTCAAATTCACTGTTTAA+CGG - chr3_3:71975065-71975084 Msa0469930:intron 30.0%
GTTAGTAGTTGTTAGTTAGA+AGG + chr3_3:71975139-71975158 None:intergenic 30.0%
! TCTCACTCCTTATTCTTTTT+CGG - chr3_3:71975195-71975214 Msa0469930:intron 30.0%
TTTCCTCTTTACATGTCTAA+TGG - chr3_3:71975218-71975237 Msa0469930:intron 30.0%
TTCCTCTTTACATGTCTAAT+GGG - chr3_3:71975219-71975238 Msa0469930:intron 30.0%
TCAAAGATGTTGTGCATATA+TGG + chr3_3:71975258-71975277 None:intergenic 30.0%
! CAGTTTAAAATCGGAAGATT+TGG - chr3_3:71975453-71975472 Msa0469930:intron 30.0%
AAATCGGAAGATTTGGATAA+TGG - chr3_3:71975460-71975479 Msa0469930:intron 30.0%
TTATCATAAGAATTGCACGT+TGG - chr3_3:71975579-71975598 Msa0469930:intron 30.0%
! TTAGTTGATTTCTACGACAA+AGG - chr3_3:71975619-71975638 Msa0469930:intron 30.0%
TGAATAACATGAGAGACATT+TGG + chr3_3:71975691-71975710 None:intergenic 30.0%
AAATGTCTCTCATGTTATTC+AGG - chr3_3:71975690-71975709 Msa0469930:intron 30.0%
! AGAAAAGGTGTAGTGTTAAT+TGG + chr3_3:71975922-71975941 None:intergenic 30.0%
!!! GCATTTTGCAGTTTTATTTC+TGG + chr3_3:71976239-71976258 None:intergenic 30.0%
ATAAAAATGCACAAATTCGG+AGG + chr3_3:71976276-71976295 None:intergenic 30.0%
AATGTTTATCAGTGTTTCTC+TGG - chr3_3:71976476-71976495 Msa0469930:intron 30.0%
TTGAAGATCTTTGGTGAAAA+GGG + chr3_3:71976560-71976579 None:intergenic 30.0%
ATTGAAGATCTTTGGTGAAA+AGG + chr3_3:71976561-71976580 None:intergenic 30.0%
CCGGATTGAGTTTATAATTA+AGG + chr3_3:71976795-71976814 None:intergenic 30.0%
TTTGTAATTAATCAACGGTC+CGG + chr3_3:71976814-71976833 None:intergenic 30.0%
TATCATGTTTAAGTAGCGTT+TGG - chr3_3:71976862-71976881 Msa0469930:intron 30.0%
AATGAAGTGACTCAAATAAG+AGG + chr3_3:71976994-71977013 None:intergenic 30.0%
AAGAGTCACAATGTCATATA+GGG + chr3_3:71977017-71977036 None:intergenic 30.0%
TAAGAGTCACAATGTCATAT+AGG + chr3_3:71977018-71977037 None:intergenic 30.0%
!! GGTTTTTATTTCACTGTCTT+TGG - chr3_3:71977468-71977487 Msa0469930:CDS 30.0%
!!! TTTCACTGTCTTTGGTTTTT+CGG - chr3_3:71977476-71977495 Msa0469930:CDS 30.0%
CGAGAAAATAAAAAAGAAGG+GGG + chr3_3:71977784-71977803 None:intergenic 30.0%
AATTTCGCTATTTACCGAAA+TGG - chr3_3:71977808-71977827 Msa0469930:CDS 30.0%
ATTATATGAGATGACTTAGG+TGG - chr3_3:71977856-71977875 Msa0469930:intron 30.0%
! TCATGTCTTTTTCTGCAAAT+TGG - chr3_3:71978045-71978064 Msa0469930:CDS 30.0%
ACTCTATAACAGATAATCCA+AGG - chr3_3:71978494-71978513 Msa0469930:CDS 30.0%
! CTACATTCTTTTATACACGT+TGG + chr3_3:71978841-71978860 None:intergenic 30.0%
CAACGTGTATAAAAGAATGT+AGG - chr3_3:71978839-71978858 Msa0469930:intron 30.0%
CTTGAGAATGCAAAATTTAG+GGG - chr3_3:71978981-71979000 Msa0469930:intron 30.0%
! GAGCTGAAATAAAAGTACAA+TGG - chr3_3:71979025-71979044 Msa0469930:intron 30.0%
TAATCGATAAGCATAAAAGG+TGG + chr3_3:71979100-71979119 None:intergenic 30.0%
CTATGTGAGTAAAAGCTTAA+AGG + chr3_3:71979175-71979194 None:intergenic 30.0%
AAGTTAAAATGGGGATTTGT+CGG + chr3_3:71979214-71979233 None:intergenic 30.0%
CACATCTAAACTTACTAACT+TGG - chr3_3:71979405-71979424 Msa0469930:CDS 30.0%
CTTTGCAAACAAGACAGAAA+TGG + chr3_3:71972100-71972119 None:intergenic 35.0%
! AGAAATTGATGGTAGCGAAT+CGG + chr3_3:71972178-71972197 None:intergenic 35.0%
GAGAGAAGAAGAGAAATTGA+TGG + chr3_3:71972189-71972208 None:intergenic 35.0%
TAGTCAAGGTTGAATTGATC+CGG - chr3_3:71972624-71972643 Msa0469930:intron 35.0%
! AAAGTTCGAAATTGGTTCTC+CGG + chr3_3:71972646-71972665 None:intergenic 35.0%
GAACCAATTTCGAACTTTGT+TGG - chr3_3:71972648-71972667 Msa0469930:intron 35.0%
GTTCCAACAAAGTTCGAAAT+TGG + chr3_3:71972654-71972673 None:intergenic 35.0%
ACAATGTCTTAGTTCAAACC+CGG - chr3_3:71972741-71972760 Msa0469930:intron 35.0%
!! AAGTCACAACTCTAAAACGA+TGG + chr3_3:71972925-71972944 None:intergenic 35.0%
TACACACACAGAAGAAGAAA+TGG + chr3_3:71973072-71973091 None:intergenic 35.0%
AACATCCAAAGAATGTTCCT+CGG + chr3_3:71973210-71973229 None:intergenic 35.0%
GGTTTACTACACTATATGTC+TGG - chr3_3:71973472-71973491 Msa0469930:intron 35.0%
TCAAGAAAACAAGAAGAGAC+TGG - chr3_3:71974062-71974081 Msa0469930:CDS 35.0%
ATCTTCATTGTCACAATCCA+AGG - chr3_3:71974221-71974240 Msa0469930:intron 35.0%
TCAACTTCTGTCGTGAAATT+AGG - chr3_3:71974311-71974330 Msa0469930:intron 35.0%
! TCAGTGGTCGTATATCTTTT+TGG - chr3_3:71974349-71974368 Msa0469930:intron 35.0%
TATTGACAGTGCACAATCAA+TGG + chr3_3:71974378-71974397 None:intergenic 35.0%
! GTTCTTACCATCTTTTACCT+TGG + chr3_3:71974451-71974470 None:intergenic 35.0%
GTATTCATCTAAGTCTCTCA+TGG + chr3_3:71974505-71974524 None:intergenic 35.0%
AGAGACTTAGATGAATACCT+AGG - chr3_3:71974507-71974526 Msa0469930:intron 35.0%
CACTTATGATCATACTTCCT+AGG + chr3_3:71974527-71974546 None:intergenic 35.0%
! CTAGGAAGTATGATCATAAG+TGG - chr3_3:71974525-71974544 Msa0469930:intron 35.0%
GGATCTGTTTGACTAACTTA+AGG + chr3_3:71974554-71974573 None:intergenic 35.0%
TAAGTTAGTCAAACAGATCC+AGG - chr3_3:71974554-71974573 Msa0469930:intron 35.0%
CGTTAAACAGTGAATTTGAG+TGG + chr3_3:71975067-71975086 None:intergenic 35.0%
TTGTTAGTTAGAAGGGTGAA+GGG + chr3_3:71975131-71975150 None:intergenic 35.0%
GAGTGAGAGGAAATTAGTAA+AGG + chr3_3:71975183-71975202 None:intergenic 35.0%
GAAAAAGAATAAGGAGTGAG+AGG + chr3_3:71975196-71975215 None:intergenic 35.0%
GAGGAAACCGAAAAAGAATA+AGG + chr3_3:71975205-71975224 None:intergenic 35.0%
TTCCCATTAGACATGTAAAG+AGG + chr3_3:71975224-71975243 None:intergenic 35.0%
TTTCCAGATTGAAGCAAAGA+TGG - chr3_3:71975377-71975396 Msa0469930:intron 35.0%
TATCCATCTTTGCTTCAATC+TGG + chr3_3:71975383-71975402 None:intergenic 35.0%
CTCTTTCACTTGTGTATCAA+CGG + chr3_3:71975413-71975432 None:intergenic 35.0%
ACAAGTGAAAGAGCTCATAA+GGG - chr3_3:71975420-71975439 Msa0469930:intron 35.0%
GGTTGAGAACAAACAGAAAA+GGG - chr3_3:71975785-71975804 Msa0469930:intron 35.0%
TCAGTGATGCATGTATACAT+TGG - chr3_3:71976110-71976129 Msa0469930:intron 35.0%
CAGTGATGCATGTATACATT+GGG - chr3_3:71976111-71976130 Msa0469930:intron 35.0%
! TTTTCATGATCAGAGCTAGT+TGG - chr3_3:71976370-71976389 Msa0469930:intron 35.0%
TGAAGATCTTTGGTGAAAAG+GGG + chr3_3:71976559-71976578 None:intergenic 35.0%
AAGATCGCATTGAAGATCTT+TGG + chr3_3:71976569-71976588 None:intergenic 35.0%
GACTATGAAAGTAAGAGAGT+TGG + chr3_3:71977066-71977085 None:intergenic 35.0%
AAACAGTACAGTTGAAAGCA+TGG + chr3_3:71977114-71977133 None:intergenic 35.0%
! GTAGACTTTTTGCATAGGAT+TGG - chr3_3:71977246-71977265 Msa0469930:intron 35.0%
!!! CCGTAATGATGTTTTGACAA+GGG + chr3_3:71977450-71977469 None:intergenic 35.0%
CCCTTGTCAAAACATCATTA+CGG - chr3_3:71977447-71977466 Msa0469930:CDS 35.0%
!!! ACCGTAATGATGTTTTGACA+AGG + chr3_3:71977451-71977470 None:intergenic 35.0%
AGGAAAATGGCGAATATTGT+TGG - chr3_3:71977506-71977525 Msa0469930:intron 35.0%
GTTTGTTTGGATGAAGAAAC+TGG - chr3_3:71977939-71977958 Msa0469930:intron 35.0%
TTTGGATGAAGAAACTGGAA+TGG - chr3_3:71977944-71977963 Msa0469930:intron 35.0%
TTGGATGAAGAAACTGGAAT+GGG - chr3_3:71977945-71977964 Msa0469930:intron 35.0%
! TGTCTTTTTCTGCAAATTGG+AGG - chr3_3:71978048-71978067 Msa0469930:CDS 35.0%
! GTCTTTTTCTGCAAATTGGA+GGG - chr3_3:71978049-71978068 Msa0469930:CDS 35.0%
! TCTTTTTCTGCAAATTGGAG+GGG - chr3_3:71978050-71978069 Msa0469930:CDS 35.0%
GGGGAAGGAAAAATATGTAT+TGG - chr3_3:71978069-71978088 Msa0469930:intron 35.0%
TGTATTGGATTTGGATGTGA+TGG - chr3_3:71978084-71978103 Msa0469930:intron 35.0%
TATAGTCTATAGGCTCTCTA+TGG - chr3_3:71978144-71978163 Msa0469930:intron 35.0%
ATAGTCTATAGGCTCTCTAT+GGG - chr3_3:71978145-71978164 Msa0469930:intron 35.0%
! GAAGTACTCACAATTAGTGT+AGG + chr3_3:71978195-71978214 None:intergenic 35.0%
TAAAATAGGACGAAAACGAC+TGG + chr3_3:71978294-71978313 None:intergenic 35.0%
TCTATTCTGTCACATACTAG+CGG - chr3_3:71978358-71978377 Msa0469930:intron 35.0%
GAATTAAACTTGTGGTCTCA+GGG + chr3_3:71978628-71978647 None:intergenic 35.0%
AGAATTAAACTTGTGGTCTC+AGG + chr3_3:71978629-71978648 None:intergenic 35.0%
ATCAACTATGTTGCGATATG+TGG + chr3_3:71978724-71978743 None:intergenic 35.0%
ATTTCCCGTTATATTTCAGG+AGG + chr3_3:71978812-71978831 None:intergenic 35.0%
!! GAATGTAGGATTGGCTTATT+TGG - chr3_3:71978853-71978872 Msa0469930:intron 35.0%
GGATGTTACCTAGTATCTTA+AGG - chr3_3:71978874-71978893 Msa0469930:intron 35.0%
! TTTTTGCAGTTGACCTTCTT+CGG - chr3_3:71979254-71979273 Msa0469930:CDS 35.0%
AACACAGTTACACAGTTGTT+TGG - chr3_3:71979569-71979588 Msa0469930:five_prime_UTR 35.0%
!! TGGGTTTTAACAAGAGGAAG+AGG + chr3_3:71972057-71972076 None:intergenic 40.0%
!!! GGGTTTTGGGTTTTAACAAG+AGG + chr3_3:71972063-71972082 None:intergenic 40.0%
GACGAAGACGAAGATAAAGT+GGG + chr3_3:71972238-71972257 None:intergenic 40.0%
AGACGAAGACGAAGATAAAG+TGG + chr3_3:71972239-71972258 None:intergenic 40.0%
TTGCTGAAGATAACGTTTCG+TGG - chr3_3:71972383-71972402 Msa0469930:intron 40.0%
AACGTTTCGTGGAGTTCAAT+TGG - chr3_3:71972394-71972413 Msa0469930:intron 40.0%
ATTAGAGAGAGCTCGAGAAA+GGG + chr3_3:71972431-71972450 None:intergenic 40.0%
TATTAGAGAGAGCTCGAGAA+AGG + chr3_3:71972432-71972451 None:intergenic 40.0%
TGGTACTTGTCACTAGCATA+CGG + chr3_3:71972705-71972724 None:intergenic 40.0%
CAATGTCTTAGTTCAAACCC+GGG - chr3_3:71972742-71972761 Msa0469930:intron 40.0%
GAATGTTGATATTGCTAGGC+TGG + chr3_3:71972777-71972796 None:intergenic 40.0%
TCGGGAATGTTGATATTGCT+AGG + chr3_3:71972781-71972800 None:intergenic 40.0%
!! CACAACTCTAAAACGATGGT+TGG + chr3_3:71972921-71972940 None:intergenic 40.0%
TTCTTCTTCTGTGTGTGTAC+AGG - chr3_3:71973073-71973092 Msa0469930:intron 40.0%
TCTATACCATCTGTGTTGTC+AGG - chr3_3:71973101-71973120 Msa0469930:intron 40.0%
CTATACCATCTGTGTTGTCA+GGG - chr3_3:71973102-71973121 Msa0469930:intron 40.0%
TTCCTCTCATTGATAAGCTG+AGG - chr3_3:71973180-71973199 Msa0469930:intron 40.0%
TCCTCTCATTGATAAGCTGA+GGG - chr3_3:71973181-71973200 Msa0469930:intron 40.0%
TGCTCACACAATTGCACATT+CGG + chr3_3:71973287-71973306 None:intergenic 40.0%
AATTGTGTGAGCAGGTAGTT+AGG - chr3_3:71973294-71973313 Msa0469930:intron 40.0%
!!! AATCTTTTTTGGACCAGGGA+TGG - chr3_3:71973556-71973575 Msa0469930:intron 40.0%
ATGATATCAGGTTCCCGAAT+TGG + chr3_3:71973582-71973601 None:intergenic 40.0%
! GGTGTTGTCACAATGATATC+AGG + chr3_3:71973594-71973613 None:intergenic 40.0%
CACCATGCATAAATTCCATG+CGG + chr3_3:71973656-71973675 None:intergenic 40.0%
AAGCTGATATGCTTCTCTGT+GGG - chr3_3:71973813-71973832 Msa0469930:intron 40.0%
!! TCAGGCGGATTACTTTATTC+TGG + chr3_3:71973844-71973863 None:intergenic 40.0%
AAAGAAGATTCCGATGTCAC+TGG + chr3_3:71973929-71973948 None:intergenic 40.0%
! TTTTGTTGCAGCTACACTTC+CGG - chr3_3:71974126-71974145 Msa0469930:CDS 40.0%
!! GCTGTTTTCTTTCCATTCAC+CGG + chr3_3:71974148-71974167 None:intergenic 40.0%
GGTGAATGGAAAGAAAACAG+CGG - chr3_3:71974147-71974166 Msa0469930:intron 40.0%
GTGAATGGAAAGAAAACAGC+GGG - chr3_3:71974148-71974167 Msa0469930:intron 40.0%
CTGTCGTGAAATTAGGAAAG+TGG - chr3_3:71974318-71974337 Msa0469930:intron 40.0%
! GTGGTCGTATATCTTTTTGG+TGG - chr3_3:71974352-71974371 Msa0469930:intron 40.0%
TGCACTGTCAATAATGTGAC+AGG - chr3_3:71974385-71974404 Msa0469930:intron 40.0%
TAATGTGACAGGAATGTGTG+CGG - chr3_3:71974396-71974415 Msa0469930:intron 40.0%
GAAGGGAGACTATCAGTAAT+AGG + chr3_3:71975114-71975133 None:intergenic 40.0%
GTTGTTAGTTAGAAGGGTGA+AGG + chr3_3:71975132-71975151 None:intergenic 40.0%
CACAAGTGAAAGAGCTCATA+AGG - chr3_3:71975419-71975438 Msa0469930:intron 40.0%
! TCGGAAGATTTGGATAATGG+TGG - chr3_3:71975463-71975482 Msa0469930:intron 40.0%
! GAAGATTTGGATAATGGTGG+TGG - chr3_3:71975466-71975485 Msa0469930:intron 40.0%
TGGTGGCATTCATAGAACAA+TGG - chr3_3:71975483-71975502 Msa0469930:intron 40.0%
TGAAGCTGTGGTGAAGATAT+TGG - chr3_3:71975531-71975550 Msa0469930:intron 40.0%
GAAGCTGTGGTGAAGATATT+GGG - chr3_3:71975532-71975551 Msa0469930:intron 40.0%
TGAAGATATTGGGCTATGCT+GGG - chr3_3:71975542-71975561 Msa0469930:intron 40.0%
! GTTGATTTCTACGACAAAGG+TGG - chr3_3:71975622-71975641 Msa0469930:intron 40.0%
GGGTTGAGAACAAACAGAAA+AGG - chr3_3:71975784-71975803 Msa0469930:intron 40.0%
TGAGAACAAACAGAAAAGGG+AGG - chr3_3:71975788-71975807 Msa0469930:intron 40.0%
! CACTACACCTTTTCTACTTG+CGG - chr3_3:71975927-71975946 Msa0469930:intron 40.0%
TCAATGTCCGCAAGTAGAAA+AGG + chr3_3:71975937-71975956 None:intergenic 40.0%
!! TAGGAAAGCATCTCCTACAT+AGG - chr3_3:71976056-71976075 Msa0469930:CDS 40.0%
!! AGGAAAGCATCTCCTACATA+GGG - chr3_3:71976057-71976076 Msa0469930:CDS 40.0%
CATCTCCTACATAGGGAATA+GGG - chr3_3:71976064-71976083 Msa0469930:CDS 40.0%
ATCTCCTACATAGGGAATAG+GGG - chr3_3:71976065-71976084 Msa0469930:CDS 40.0%
TACATGCATCACTGAGCAAA+TGG + chr3_3:71976105-71976124 None:intergenic 40.0%
AAACAACAAAGGGTGGTGAA+GGG + chr3_3:71976199-71976218 None:intergenic 40.0%
GATTGACAAACAACAAAGGG+TGG + chr3_3:71976206-71976225 None:intergenic 40.0%
TTTGTTGGGAGAATGAAGTG+TGG - chr3_3:71976435-71976454 Msa0469930:intron 40.0%
TTGTTGGGAGAATGAAGTGT+GGG - chr3_3:71976436-71976455 Msa0469930:intron 40.0%
TGGAGAAGGGAAAGGAAATT+GGG - chr3_3:71976640-71976659 Msa0469930:intron 40.0%
! GTTTGGTAACTTTCACACGA+TGG - chr3_3:71976879-71976898 Msa0469930:intron 40.0%
AAGAGAGTTGGATACATGCA+TGG + chr3_3:71977054-71977073 None:intergenic 40.0%
CAATGTTGTGCATGTGTTTC+AGG - chr3_3:71977203-71977222 Msa0469930:intron 40.0%
! CTGCTGTAGACTTTTTGCAT+AGG - chr3_3:71977241-71977260 Msa0469930:intron 40.0%
!!! TTTGGTTTTTCGGTGAGTTG+AGG - chr3_3:71977486-71977505 Msa0469930:CDS 40.0%
! TTTCGGTGAGTTGAGGAAAA+TGG - chr3_3:71977493-71977512 Msa0469930:CDS 40.0%
ATGGCGAATATTGTTGGAAG+TGG - chr3_3:71977512-71977531 Msa0469930:intron 40.0%
! AGAAGACAAGAAAGCGTACT+TGG - chr3_3:71977580-71977599 Msa0469930:CDS 40.0%
GAGTATGTCCTTAGAGACAA+CGG - chr3_3:71977602-71977621 Msa0469930:CDS 40.0%
! ACACTTTTCCGTTGTCTCTA+AGG + chr3_3:71977613-71977632 None:intergenic 40.0%
! TAGAGACAACGGAAAAGTGT+TGG - chr3_3:71977613-71977632 Msa0469930:CDS 40.0%
!! CAACGGAAAAGTGTTGGATT+TGG - chr3_3:71977619-71977638 Msa0469930:CDS 40.0%
ATGAAGAAACTGGAATGGGA+TGG - chr3_3:71977949-71977968 Msa0469930:intron 40.0%
! GTTGATGAAATGGAACCAAG+TGG - chr3_3:71977978-71977997 Msa0469930:CDS 40.0%
TAGTCTATAGGCTCTCTATG+GGG - chr3_3:71978146-71978165 Msa0469930:intron 40.0%
CTAATTGTGAGTACTTCTGC+CGG - chr3_3:71978198-71978217 Msa0469930:intron 40.0%
ACTAAAGTTCGAATCCCTAC+CGG + chr3_3:71978220-71978239 None:intergenic 40.0%
TGGTGAACTATCTCTAGTCT+AGG + chr3_3:71978767-71978786 None:intergenic 40.0%
GACAGCCTCCTGAAATATAA+CGG - chr3_3:71978804-71978823 Msa0469930:intron 40.0%
ACAGCCTCCTGAAATATAAC+GGG - chr3_3:71978805-71978824 Msa0469930:intron 40.0%
ACAGCTCACCTTAAGATACT+AGG + chr3_3:71978885-71978904 None:intergenic 40.0%
AAAAGAAGCTTGAGTGTGTC+TGG - chr3_3:71978941-71978960 Msa0469930:intron 40.0%
! TGATTGTCGACTACTATCTC+TGG - chr3_3:71979067-71979086 Msa0469930:intron 40.0%
! GATTGTCGACTACTATCTCT+GGG - chr3_3:71979068-71979087 Msa0469930:intron 40.0%
! TTTTGCAGTTGACCTTCTTC+GGG - chr3_3:71979255-71979274 Msa0469930:CDS 40.0%
ATTGAGTAAATCCCCGAAGA+AGG + chr3_3:71979270-71979289 None:intergenic 40.0%
! GAATTCCAAGTTGGGTTCTT+CGG + chr3_3:71979357-71979376 None:intergenic 40.0%
ACACCACAGAATTCCAAGTT+GGG + chr3_3:71979365-71979384 None:intergenic 40.0%
TACACCACAGAATTCCAAGT+TGG + chr3_3:71979366-71979385 None:intergenic 40.0%
TGTGCTTAGATTTATGGCAC+AGG - chr3_3:71979504-71979523 Msa0469930:CDS 40.0%
GAAATGACCTGAACGAGAGA+GGG + chr3_3:71972469-71972488 None:intergenic 45.0%
AGAAATGACCTGAACGAGAG+AGG + chr3_3:71972470-71972489 None:intergenic 45.0%
CATTCCCGAGCTAAGCATTA+CGG - chr3_3:71972792-71972811 Msa0469930:intron 45.0%
AAGTCCGTAATGCTTAGCTC+GGG + chr3_3:71972799-71972818 None:intergenic 45.0%
GAAGTCCGTAATGCTTAGCT+CGG + chr3_3:71972800-71972819 None:intergenic 45.0%
TTCTTCTATTCGGACTGCTG+AGG - chr3_3:71973032-71973051 Msa0469930:intron 45.0%
GTAGTTATTGCTGCAGAGAC+CGG - chr3_3:71973131-71973150 Msa0469930:intron 45.0%
ACTGTATGTCTTACCACTGC+CGG + chr3_3:71973153-71973172 None:intergenic 45.0%
CCTCTCATTGATAAGCTGAG+GGG - chr3_3:71973182-71973201 Msa0469930:intron 45.0%
TGATAAAGAAGTCTCTCCGC+CGG - chr3_3:71973235-71973254 Msa0469930:intron 45.0%
GAATGTGCAATTGTGTGAGC+AGG - chr3_3:71973286-71973305 Msa0469930:intron 45.0%
AGGATGGCTAATAGTCTCTG+TGG - chr3_3:71973314-71973333 Msa0469930:intron 45.0%
AATGGCTGCAGCACTAACAA+TGG + chr3_3:71973354-71973373 None:intergenic 45.0%
TTAGTGCTGCAGCCATTTGT+GGG - chr3_3:71973357-71973376 Msa0469930:intron 45.0%
CACTACCTGTTTCCCACAAA+TGG + chr3_3:71973372-71973391 None:intergenic 45.0%
ACATGATTGAGAAGAGCAGC+AGG + chr3_3:71973615-71973634 None:intergenic 45.0%
GAAGCTGATATGCTTCTCTG+TGG - chr3_3:71973812-71973831 Msa0469930:intron 45.0%
! CATAGCGGAGCAAGTTAATC+AGG + chr3_3:71973862-71973881 None:intergenic 45.0%
ATCAGAGTTGCCAGTGACAT+CGG - chr3_3:71973916-71973935 Msa0469930:intron 45.0%
TTGTCGCATGATGCTTCAGA+AGG - chr3_3:71973950-71973969 Msa0469930:CDS 45.0%
TGATGCTTCAGAAGGTGAAG+AGG - chr3_3:71973958-71973977 Msa0469930:CDS 45.0%
TCGTCTGACATGGCTTCAAT+TGG + chr3_3:71973989-71974008 None:intergenic 45.0%
AATTGAAGCCATGTCAGACG+AGG - chr3_3:71973988-71974007 Msa0469930:CDS 45.0%
ACATGTTTCCTGATGCTGAG+TGG - chr3_3:71974185-71974204 Msa0469930:intron 45.0%
CATGTTTCCTGATGCTGAGT+GGG - chr3_3:71974186-71974205 Msa0469930:intron 45.0%
AGGGGGAAAATATAGCACCT+TGG + chr3_3:71974241-71974260 None:intergenic 45.0%
AATACCACATAGGCAGTTCG+AGG - chr3_3:71975028-71975047 Msa0469930:intron 45.0%
TTGTGATATCCAACCCATCC+CGG - chr3_3:71975289-71975308 Msa0469930:intron 45.0%
! ACACTGTTTTCCAGTAGAGC+CGG + chr3_3:71975311-71975330 None:intergenic 45.0%
TTCAACAGCCTCAACTGTGT+TGG + chr3_3:71975515-71975534 None:intergenic 45.0%
GTGAAGATATTGGGCTATGC+TGG - chr3_3:71975541-71975560 Msa0469930:intron 45.0%
AGAATTGCACGTTGGATGAG+CGG - chr3_3:71975587-71975606 Msa0469930:intron 45.0%
GCATCTCCTACATAGGGAAT+AGG - chr3_3:71976063-71976082 Msa0469930:CDS 45.0%
AACTCCCCTATTCCCTATGT+AGG + chr3_3:71976072-71976091 None:intergenic 45.0%
ATCACTGAGCAAATGGTGCA+CGG + chr3_3:71976098-71976117 None:intergenic 45.0%
CAAACAACAAAGGGTGGTGA+AGG + chr3_3:71976200-71976219 None:intergenic 45.0%
AAACCTGCTTCTTTCGCTCA+CGG + chr3_3:71976344-71976363 None:intergenic 45.0%
GCGAAAGAAGCAGGTTTCTA+TGG - chr3_3:71976347-71976366 Msa0469930:intron 45.0%
ATTTCCTTTCCCTTCTCCAC+TGG + chr3_3:71976639-71976658 None:intergenic 45.0%
GTGGAGAAGGGAAAGGAAAT+TGG - chr3_3:71976639-71976658 Msa0469930:intron 45.0%
GGAGAAGGGAAAGGAAATTG+GGG - chr3_3:71976641-71976660 Msa0469930:intron 45.0%
TACGCATCATGCTTGTACAG+AGG - chr3_3:71976677-71976696 Msa0469930:intron 45.0%
! TCACACGATGGTCTCTCTTT+TGG - chr3_3:71976891-71976910 Msa0469930:intron 45.0%
TGTGGAACGAAGGAACAAAG+AGG - chr3_3:71977549-71977568 Msa0469930:CDS 45.0%
TCTCTTGGAAGGAGGAACAT+AGG + chr3_3:71977651-71977670 None:intergenic 45.0%
TATGTTCCTCCTTCCAAGAG+AGG - chr3_3:71977650-71977669 Msa0469930:CDS 45.0%
AAACCCAAACCTCTCTTGGA+AGG + chr3_3:71977662-71977681 None:intergenic 45.0%
AGCTAAACCCAAACCTCTCT+TGG + chr3_3:71977666-71977685 None:intergenic 45.0%
GATGACAGATAAGGAGTGAG+AGG + chr3_3:71977723-71977742 None:intergenic 45.0%
ACGGAGATGTAAGAACAGGT+GGG + chr3_3:71977746-71977765 None:intergenic 45.0%
ACTCACGGAGATGTAAGAAC+AGG + chr3_3:71977750-71977769 None:intergenic 45.0%
GGGGTGTGAAAATGAACTCA+CGG + chr3_3:71977765-71977784 None:intergenic 45.0%
GAGATGACTTAGGTGGCATT+TGG - chr3_3:71977863-71977882 Msa0469930:intron 45.0%
TTTCTGCAAATTGGAGGGGA+AGG - chr3_3:71978054-71978073 Msa0469930:CDS 45.0%
AGTCTATAGGCTCTCTATGG+GGG - chr3_3:71978147-71978166 Msa0469930:intron 45.0%
CTAGAGATAGTTCACCAGAG+AGG - chr3_3:71978770-71978789 Msa0469930:intron 45.0%
TTTGCAGTTGACCTTCTTCG+GGG - chr3_3:71979256-71979275 Msa0469930:CDS 45.0%
TTCTTCCGAAGAACCCAACT+TGG - chr3_3:71979349-71979368 Msa0469930:CDS 45.0%
GAACCCAACTTGGAATTCTG+TGG - chr3_3:71979359-71979378 Msa0469930:CDS 45.0%
TCTGTGGTGTACAAAGAGAG+TGG - chr3_3:71979375-71979394 Msa0469930:CDS 45.0%
CATCAAAATGTAGCCGTGTG+TGG - chr3_3:71979454-71979473 Msa0469930:CDS 45.0%
CAAAGCCACTTAACCACACA+CGG + chr3_3:71979470-71979489 None:intergenic 45.0%
!! AAGTTTAATTATAAAAATAT+GGG + chr3_3:71976028-71976047 None:intergenic 5.0%
!! TAAGTTTAATTATAAAAATA+TGG + chr3_3:71976029-71976048 None:intergenic 5.0%
!!! ATTTTTATAATTAAACTTAT+AGG - chr3_3:71976030-71976049 Msa0469930:CDS 5.0%
!!! TGTTTTAAATAATAATAAAA+AGG + chr3_3:71976403-71976422 None:intergenic 5.0%
CTGCTGTGTTTGACGTGGAA+GGG + chr3_3:71972302-71972321 None:intergenic 50.0%
TCTGCTGTGTTTGACGTGGA+AGG + chr3_3:71972303-71972322 None:intergenic 50.0%
TGTGTCTGCTGTGTTTGACG+TGG + chr3_3:71972307-71972326 None:intergenic 50.0%
GAAACGGCGCTTCCAACAAA+GGG + chr3_3:71972331-71972350 None:intergenic 50.0%
TGAAACGGCGCTTCCAACAA+AGG + chr3_3:71972332-71972351 None:intergenic 50.0%
CAATACACCCTCTCTCGTTC+AGG - chr3_3:71972459-71972478 Msa0469930:intron 50.0%
! TAGGCTGGACACTTTTACCC+GGG + chr3_3:71972762-71972781 None:intergenic 50.0%
! CTAGGCTGGACACTTTTACC+CGG + chr3_3:71972763-71972782 None:intergenic 50.0%
ACCATCTGTGTTGTCAGGGA+AGG - chr3_3:71973106-71973125 Msa0469930:intron 50.0%
TCCTTCCCTGACAACACAGA+TGG + chr3_3:71973110-71973129 None:intergenic 50.0%
CCCCTCAGCTTATCAATGAG+AGG + chr3_3:71973185-71973204 None:intergenic 50.0%
!! GGGTACCGAGGAACATTCTT+TGG - chr3_3:71973202-71973221 Msa0469930:intron 50.0%
GTGTGAGCAGGTAGTTAGGA+TGG - chr3_3:71973298-71973317 Msa0469930:intron 50.0%
GTTAGTGCTGCAGCCATTTG+TGG - chr3_3:71973356-71973375 Msa0469930:intron 50.0%
TGCAGCCATTTGTGGGAAAC+AGG - chr3_3:71973364-71973383 Msa0469930:intron 50.0%
CGCCGCATGGAATTTATGCA+TGG - chr3_3:71973651-71973670 Msa0469930:intron 50.0%
AGCGGAGCAAGTTAATCAGG+CGG + chr3_3:71973859-71973878 None:intergenic 50.0%
ATCATCCTCCTCGTCTGACA+TGG + chr3_3:71973999-71974018 None:intergenic 50.0%
! CGAGGAGGATGATGATAACG+AGG - chr3_3:71974006-71974025 Msa0469930:CDS 50.0%
GAAGAGACTGGAGAAGAGTG+AGG - chr3_3:71974074-71974093 Msa0469930:CDS 50.0%
GAAAGTGGTCAGTGCATCAG+TGG - chr3_3:71974333-71974352 Msa0469930:intron 50.0%
! TTAGCTCTCGACACTCAAGG+TGG + chr3_3:71974956-71974975 None:intergenic 50.0%
! TGGTTAGCTCTCGACACTCA+AGG + chr3_3:71974959-71974978 None:intergenic 50.0%
AGTTCCTCGAACTGCCTATG+TGG + chr3_3:71975035-71975054 None:intergenic 50.0%
! TTTTCCAGTAGAGCCGGGAT+GGG + chr3_3:71975305-71975324 None:intergenic 50.0%
! CACTGTTTTCCAGTAGAGCC+GGG + chr3_3:71975310-71975329 None:intergenic 50.0%
GGTGTTTGCCAACACAGTTG+AGG - chr3_3:71975504-71975523 Msa0469930:intron 50.0%
AGTTGAGGCTGTTGAAGCTG+TGG - chr3_3:71975519-71975538 Msa0469930:intron 50.0%
GAATTGCACGTTGGATGAGC+GGG - chr3_3:71975588-71975607 Msa0469930:intron 50.0%
TCACTGAGCAAATGGTGCAC+GGG + chr3_3:71976097-71976116 None:intergenic 50.0%
ACAAAGGGTGGTGAAGGGAA+TGG + chr3_3:71976194-71976213 None:intergenic 50.0%
AGGGAAAGGAAATTGGGGAG+TGG - chr3_3:71976646-71976665 Msa0469930:intron 50.0%
ATCATGCTTGTACAGAGGCG+AGG - chr3_3:71976682-71976701 Msa0469930:intron 50.0%
CAGCACGGATGGATGATTGA+GGG - chr3_3:71976710-71976729 Msa0469930:intron 50.0%
AGCACGGATGGATGATTGAG+GGG - chr3_3:71976711-71976730 Msa0469930:intron 50.0%
GATGGATGATTGAGGGGAGA+TGG - chr3_3:71976717-71976736 Msa0469930:intron 50.0%
ATTGAGGGGAGATGGAGTTG+TGG - chr3_3:71976725-71976744 Msa0469930:intron 50.0%
GGAGATGGAGTTGTGGTTGT+GGG - chr3_3:71976732-71976751 Msa0469930:intron 50.0%
AGTTGTGGTTGTGGGAGAGA+TGG - chr3_3:71976740-71976759 Msa0469930:intron 50.0%
GTTGTGGTTGTGGGAGAGAT+GGG - chr3_3:71976741-71976760 Msa0469930:intron 50.0%
GTGGAAGTCCAATGATCGTG+TGG - chr3_3:71977531-71977550 Msa0469930:intron 50.0%
CCTTCGTTCCACACGATCAT+TGG + chr3_3:71977542-71977561 None:intergenic 50.0%
CCAATGATCGTGTGGAACGA+AGG - chr3_3:71977539-71977558 Msa0469930:intron 50.0%
TCCTCCTTCCAAGAGAGGTT+TGG - chr3_3:71977655-71977674 Msa0469930:CDS 50.0%
CCTCCTTCCAAGAGAGGTTT+GGG - chr3_3:71977656-71977675 Msa0469930:CDS 50.0%
GATTAAAGGCAGCGAGAGTG+AGG + chr3_3:71977694-71977713 None:intergenic 50.0%
GTGAGAGGTGGCGTGATTAA+AGG + chr3_3:71977708-71977727 None:intergenic 50.0%
GACAGATAAGGAGTGAGAGG+TGG + chr3_3:71977720-71977739 None:intergenic 50.0%
ACAGGTGGGGATGACAGATA+AGG + chr3_3:71977732-71977751 None:intergenic 50.0%
CGGAGATGTAAGAACAGGTG+GGG + chr3_3:71977745-71977764 None:intergenic 50.0%
CACGGAGATGTAAGAACAGG+TGG + chr3_3:71977747-71977766 None:intergenic 50.0%
TTGTGAGTACTTCTGCCGGT+AGG - chr3_3:71978202-71978221 Msa0469930:intron 50.0%
TGTGAGTACTTCTGCCGGTA+GGG - chr3_3:71978203-71978222 Msa0469930:intron 50.0%
GAAAACGACTGGCAGAGGAT+GGG + chr3_3:71978283-71978302 None:intergenic 50.0%
GGTGACTACTCACTACTCCT+TGG + chr3_3:71978514-71978533 None:intergenic 50.0%
AGATAGTTCACCAGAGAGGC+AGG - chr3_3:71978774-71978793 Msa0469930:intron 50.0%
GATAGTTCACCAGAGAGGCA+GGG - chr3_3:71978775-71978794 Msa0469930:intron 50.0%
GTCTTTAATCCCTGCCTCTC+TGG + chr3_3:71978787-71978806 None:intergenic 50.0%
TGTAGCCGTGTGTGGTTAAG+TGG - chr3_3:71979462-71979481 Msa0469930:CDS 50.0%
CAGCAGACACAGCCCTTTGT+TGG - chr3_3:71972316-71972335 Msa0469930:intron 55.0%
!! TGATAAGCTGAGGGGTACCG+AGG - chr3_3:71973190-71973209 Msa0469930:intron 55.0%
AAGCACGAGCAGAACTCTCC+TGG + chr3_3:71973261-71973280 None:intergenic 55.0%
TGGACCAGGGATGGCCAATT+CGG - chr3_3:71973565-71973584 Msa0469930:intron 55.0%
! CGTTGATAGAAGACGCCGCA+TGG - chr3_3:71973638-71973657 Msa0469930:intron 55.0%
TGAAGCCATGTCAGACGAGG+AGG - chr3_3:71973991-71974010 Msa0469930:CDS 55.0%
GCAGCTACACTTCCGGTGAA+TGG - chr3_3:71974133-71974152 Msa0469930:CDS 55.0%
CCACTAACCCACTCAGCATC+AGG + chr3_3:71974196-71974215 None:intergenic 55.0%
!! CCTGATGCTGAGTGGGTTAG+TGG - chr3_3:71974193-71974212 Msa0469930:intron 55.0%
! GTTTTCCAGTAGAGCCGGGA+TGG + chr3_3:71975306-71975325 None:intergenic 55.0%
! TGTACTGATGCAGCTGCTCG+TGG - chr3_3:71975655-71975674 Msa0469930:intron 55.0%
TGGGGAAGGAGTTAGTGGAG+AGG + chr3_3:71976155-71976174 None:intergenic 55.0%
AGAGCTGGGGAAGGAGTTAG+TGG + chr3_3:71976160-71976179 None:intergenic 55.0%
TGAAGGGAATGGAGAGGAGG+AGG + chr3_3:71976183-71976202 None:intergenic 55.0%
TGGTGAAGGGAATGGAGAGG+AGG + chr3_3:71976186-71976205 None:intergenic 55.0%
TTCAGACGGTGAGTGTCCAG+TGG - chr3_3:71976620-71976639 Msa0469930:intron 55.0%
GGTGAGTGTCCAGTGGAGAA+GGG - chr3_3:71976627-71976646 Msa0469930:intron 55.0%
GTGTCCAGTGGAGAAGGGAA+AGG - chr3_3:71976632-71976651 Msa0469930:intron 55.0%
GCAGCACGGATGGATGATTG+AGG - chr3_3:71976709-71976728 Msa0469930:intron 55.0%
GGGAGATGGAGTTGTGGTTG+TGG - chr3_3:71976731-71976750 Msa0469930:intron 55.0%
CCCAAACCTCTCTTGGAAGG+AGG + chr3_3:71977659-71977678 None:intergenic 55.0%
GAGGATGGGTCAAGTGGAGA+GGG + chr3_3:71978269-71978288 None:intergenic 55.0%
AGAGGATGGGTCAAGTGGAG+AGG + chr3_3:71978270-71978289 None:intergenic 55.0%
CGAAAACGACTGGCAGAGGA+TGG + chr3_3:71978284-71978303 None:intergenic 55.0%
AGGACGAAAACGACTGGCAG+AGG + chr3_3:71978288-71978307 None:intergenic 55.0%
ATTGCTGCAGAGACCGGCAG+TGG - chr3_3:71973137-71973156 Msa0469930:intron 60.0%
ACGAGCAGAACTCTCCTGGC+CGG + chr3_3:71973257-71973276 None:intergenic 60.0%
GGACCAGGGATGGCCAATTC+GGG - chr3_3:71973566-71973585 Msa0469930:intron 60.0%
GTTCCCGAATTGGCCATCCC+TGG + chr3_3:71973572-71973591 None:intergenic 60.0%
TGGAGAGGAGGAGGAGAGCT+GGG + chr3_3:71976174-71976193 None:intergenic 60.0%
ATGGAGAGGAGGAGGAGAGC+TGG + chr3_3:71976175-71976194 None:intergenic 60.0%
GGGTGGTGAAGGGAATGGAG+AGG + chr3_3:71976189-71976208 None:intergenic 60.0%
GAGCCGTGAGCGAAAGAAGC+AGG - chr3_3:71976338-71976357 Msa0469930:intron 60.0%
CGGTGAGTGTCCAGTGGAGA+AGG - chr3_3:71976626-71976645 Msa0469930:intron 60.0%
TGCTTGTACAGAGGCGAGGC+AGG - chr3_3:71976686-71976705 Msa0469930:intron 60.0%
GCTTGTACAGAGGCGAGGCA+GGG - chr3_3:71976687-71976706 Msa0469930:intron 60.0%
CTGGCAGAGGATGGGTCAAG+TGG + chr3_3:71978275-71978294 None:intergenic 60.0%
AAGAAGTCTCTCCGCCGGCC+AGG - chr3_3:71973240-71973259 Msa0469930:intron 65.0%
AGCAGAACTCTCCTGGCCGG+CGG + chr3_3:71973254-71973273 None:intergenic 65.0%
CCAGTAGAGCCGGGATGGGT+TGG + chr3_3:71975301-71975320 None:intergenic 65.0%
CCAACCCATCCCGGCTCTAC+TGG - chr3_3:71975298-71975317 Msa0469930:intron 65.0%
TGATGCAGCTGCTCGTGGCG+TGG - chr3_3:71975660-71975679 Msa0469930:intron 65.0%
AGGAGGAGGAGAGCTGGGGA+AGG + chr3_3:71976169-71976188 None:intergenic 65.0%
GGAGAGGAGGAGGAGAGCTG+GGG + chr3_3:71976173-71976192 None:intergenic 65.0%
AGAGGCGAGGCAGGGCAGCA+CGG - chr3_3:71976695-71976714 Msa0469930:intron 70.0%
GCGAGGCAGGGCAGCACGGA+TGG - chr3_3:71976699-71976718 Msa0469930:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 71972041 71979616 71972041 ID=Msa0469930;Name=Msa0469930
chr3_3 mRNA 71972041 71979616 71972041 ID=Msa0469930-mRNA-1;Parent=Msa0469930;Name=Msa0469930-mRNA-1;_AED=0.13;_eAED=0.13;_QI=89|0.36|0.25|1|0.36|0.25|12|203|555
chr3_3 exon 71972041 71972315 71972041 ID=Msa0469930-mRNA-1:exon:17772;Parent=Msa0469930-mRNA-1
chr3_3 exon 71973921 71974154 71973921 ID=Msa0469930-mRNA-1:exon:17771;Parent=Msa0469930-mRNA-1
chr3_3 exon 71975946 71976110 71975946 ID=Msa0469930-mRNA-1:exon:17770;Parent=Msa0469930-mRNA-1
chr3_3 exon 71976117 71976273 71976117 ID=Msa0469930-mRNA-1:exon:17769;Parent=Msa0469930-mRNA-1
chr3_3 exon 71977415 71977520 71977415 ID=Msa0469930-mRNA-1:exon:17768;Parent=Msa0469930-mRNA-1
chr3_3 exon 71977545 71977685 71977545 ID=Msa0469930-mRNA-1:exon:17767;Parent=Msa0469930-mRNA-1
chr3_3 exon 71977736 71977742 71977736 ID=Msa0469930-mRNA-1:exon:17766;Parent=Msa0469930-mRNA-1
chr3_3 exon 71977807 71977854 71977807 ID=Msa0469930-mRNA-1:exon:17765;Parent=Msa0469930-mRNA-1
chr3_3 exon 71977971 71978084 71977971 ID=Msa0469930-mRNA-1:exon:17764;Parent=Msa0469930-mRNA-1
chr3_3 exon 71978272 71978349 71978272 ID=Msa0469930-mRNA-1:exon:17763;Parent=Msa0469930-mRNA-1
chr3_3 exon 71978368 71978562 71978368 ID=Msa0469930-mRNA-1:exon:17762;Parent=Msa0469930-mRNA-1
chr3_3 exon 71979177 71979616 71979177 ID=Msa0469930-mRNA-1:exon:17761;Parent=Msa0469930-mRNA-1
chr3_3 five_prime_UTR 71979528 71979616 71979528 ID=Msa0469930-mRNA-1:five_prime_utr;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71979177 71979527 71979177 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71978368 71978562 71978368 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71978272 71978349 71978272 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71977971 71978084 71977971 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71977807 71977854 71977807 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71977736 71977742 71977736 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71977545 71977685 71977545 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71977415 71977520 71977415 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71976117 71976273 71976117 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71975946 71976110 71975946 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71973921 71974154 71973921 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 CDS 71972244 71972315 71972244 ID=Msa0469930-mRNA-1:cds;Parent=Msa0469930-mRNA-1
chr3_3 three_prime_UTR 71972041 71972243 71972041 ID=Msa0469930-mRNA-1:three_prime_utr;Parent=Msa0469930-mRNA-1
Gene Sequence

>Msa0469930

ATGAATGTTACTCGTTCTGCTCTGAAACTCCATTTTCAAAATTCACCGATTCGCTACCATCAATTTCTCTTCTTCTCTCGATTCAACAATGCTCTTATTCGCAATCCCACTTTATCTTCGTCTTCGTCTTCTCTTTTCAATTTCAATGCAACGCGTTTCTTTTCTCTAACCCTTCCACGTCAAACACAGCAGACACAGCCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTACAATGGAAGAGACACTTTCTTTGCTGAAGATAACGTTTCGTGGAGTTCAATTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTTCAGGCTTCTTCTATACCATCTGTGTTGTCAGGGAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTACTTCCTCTCATTGATAAGCTGAGGGGTACCGAGGAACATTCTTTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCGGCCAGGAGAGTTCTGCTCGTGCTTTGTCCGAATGTAGTTAGGATGGCTAATAGTCTCTGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAATATCAGAGTGAAGAGGAATTTCCAATTGAAGCCATGTCAGACGAGGAGGATGATGATAACGAGGATATTGCCAATATTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGACTGGAGAAGAGTGAGGAGATATTTTGAGCGAACTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGTTGAGGAAAATGGCGAATATTGTTGGAAGTGGAAGTCCAATGATCGTGTGGAACGAAGGAACAAAGAGGTTTGAGACAGAAGACAAGAAAGCGTACTTGGAGTATGTCCTTAGAGACAACGGAAAAGTGTTGGATTTGGTACATACCTATGTTCCTCCTTCCAAGAGAGGTTTGGGTTTAGCTTCTCACCTCACTCTCGCTGCCTTTAATCACGCCACCTCTCACTCCTTATCTGAAACATTTCTTCCGAAGAACCCAACTTGGAATTCTGTGGTGTACAAAGAGAGTGGTCAATCTCACATCTAA

Protein sequence

>Msa0469930

MNVTRSALKLHFQNSPIRYHQFLFFSRFNNALIRNPTLSSSSSSLFNFNATRFFSLTLPRQTQQTQPFVGSAVSSEDYNGRDTFFAEDNVSWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEHSLDVVSDKEVSPPARRVLLVLCPNVVRMANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKYQSEEEFPIEAMSDEEDDDNEDIANINNEAESVKKTRRDWRRVRRYFERTTLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQLRKMANIVGSGSPMIVWNEGTKRFETEDKKAYLEYVLRDNGKVLDLVHTYVPPSKRGLGLASHLTLAAFNHATSHSLSETFLPKNPTWNSVVYKESGQSHI*