AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1144700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144700 MtrunA17_Chr8g0364251 96.880 577 18 0 1 577 1 577 0.0 1162
Msa1144700 MtrunA17_Chr7g0236831 24.213 508 288 17 91 563 163 608 3.30e-23 104
Msa1144700 MtrunA17_Chr6g0466611 31.472 197 110 6 91 278 142 322 1.68e-21 99.0
Msa1144700 MtrunA17_Chr6g0466611 30.653 199 121 5 358 552 333 518 3.41e-17 85.5
Msa1144700 MtrunA17_Chr3g0107851 30.288 208 137 4 347 552 286 487 5.26e-19 90.5
Msa1144700 MtrunA17_Chr3g0107851 29.000 200 114 7 113 303 139 319 2.04e-12 69.7
Msa1144700 MtrunA17_Chr1g0176041 33.951 162 95 5 400 554 380 536 2.57e-18 88.6
Msa1144700 MtrunA17_Chr1g0176041 27.320 194 119 6 91 276 154 333 3.16e-11 66.2
Msa1144700 MtrunA17_Chr2g0307471 28.421 190 118 4 91 276 91 266 3.36e-18 88.2
Msa1144700 MtrunA17_Chr2g0307471 37.634 93 57 1 437 528 339 431 5.34e-14 74.7
Msa1144700 MtrunA17_Chr4g0029191 32.308 195 111 7 89 276 42 222 1.11e-17 86.7
Msa1144700 MtrunA17_Chr4g0029191 27.632 152 86 3 399 532 314 459 9.83e-12 67.8
Msa1144700 MtrunA17_Chr2g0301281 32.308 195 111 7 89 276 39 219 1.62e-17 86.3
Msa1144700 MtrunA17_Chr2g0301281 28.289 152 85 3 399 532 311 456 5.86e-12 68.6
Msa1144700 MtrunA17_Chr1g0192021 30.319 188 116 4 87 269 22 199 1.91e-17 85.9
Msa1144700 MtrunA17_Chr3g0145781 32.432 185 109 6 358 530 318 498 1.33e-16 83.2
Msa1144700 MtrunA17_Chr3g0145781 30.500 200 108 8 72 261 119 297 1.34e-15 79.7
Msa1144700 MtrunA17_Chr6g0449741 30.208 192 114 8 91 276 249 426 3.01e-16 82.4
Msa1144700 MtrunA17_Chr6g0449741 32.544 169 94 5 381 539 456 614 3.49e-14 75.9
Msa1144700 MtrunA17_Chr6g0449911 31.818 220 116 10 69 274 137 336 3.11e-16 82.4
Msa1144700 MtrunA17_Chr4g0076491 30.208 192 114 8 91 276 287 464 3.58e-16 82.0
Msa1144700 MtrunA17_Chr4g0076491 40.196 102 60 1 439 539 553 654 1.43e-14 77.0
Msa1144700 MtrunA17_Chr2g0330401 33.835 133 80 3 427 554 335 464 8.77e-16 80.5
Msa1144700 MtrunA17_Chr2g0330401 28.571 189 108 5 113 293 118 287 6.28e-13 71.2
Msa1144700 MtrunA17_Chr3g0121351 35.971 139 80 3 438 569 407 543 1.61e-15 79.7
Msa1144700 MtrunA17_Chr4g0040761 27.442 215 135 5 91 301 19 216 3.57e-15 79.0
Msa1144700 MtrunA17_Chr7g0247221 33.858 127 81 2 435 560 379 503 9.24e-15 77.0
Msa1144700 MtrunA17_Chr7g0247181 33.858 127 81 2 435 560 376 500 9.41e-15 77.0
Msa1144700 MtrunA17_Chr7g0247191 33.858 127 81 2 435 560 386 510 9.66e-15 77.0
Msa1144700 MtrunA17_Chr2g0300291 34.532 139 89 2 417 553 368 506 1.16e-14 77.4
Msa1144700 MtrunA17_Chr2g0300291 29.268 205 114 7 84 275 128 314 4.10e-14 75.5
Msa1144700 MtrunA17_Chr4g0062301 29.891 184 102 5 102 276 108 273 1.36e-14 77.0
Msa1144700 MtrunA17_Chr4g0062301 33.835 133 84 4 437 567 346 476 2.28e-12 69.7
Msa1144700 MtrunA17_Chr3g0098121 29.902 204 107 8 83 275 146 324 1.70e-14 77.0
Msa1144700 MtrunA17_Chr3g0098121 36.134 119 74 2 437 553 398 516 3.23e-14 75.9
Msa1144700 MtrunA17_Chr4g0063551 35.833 120 72 2 433 549 399 516 1.80e-14 76.6
Msa1144700 MtrunA17_Chr2g0277821 23.980 196 135 4 91 283 504 688 1.90e-14 77.0
Msa1144700 MtrunA17_Chr2g0309551 28.497 193 120 4 91 273 109 293 2.81e-14 75.9
Msa1144700 MtrunA17_Chr8g0386451 30.387 181 109 6 103 276 300 470 4.21e-14 75.5
Msa1144700 MtrunA17_Chr6g0483491 37.273 110 64 2 438 544 253 360 5.40e-14 74.3
Msa1144700 MtrunA17_Chr6g0483491 29.167 192 111 6 91 276 10 182 4.16e-13 71.6
Msa1144700 MtrunA17_Chr7g0236841 37.273 110 64 2 438 544 253 360 6.11e-14 74.3
Msa1144700 MtrunA17_Chr7g0236841 29.167 192 111 6 91 276 10 182 1.57e-13 72.8
Msa1144700 MtrunA17_Chr4g0058591 28.646 192 120 4 105 293 216 393 6.33e-14 74.7
Msa1144700 MtrunA17_Chr5g0409981 34.400 125 77 2 436 555 353 477 3.32e-13 72.4
Msa1144700 MtrunA17_Chr8g0347161 30.233 172 93 6 114 273 125 281 9.85e-13 70.9
Msa1144700 MtrunA17_Chr8g0347151 27.391 230 132 8 79 293 191 400 1.36e-12 70.5
Msa1144700 MtrunA17_Chr8g0347151 25.654 191 134 4 343 532 373 556 8.93e-12 68.2
Msa1144700 MtrunA17_Chr2g0293631 27.315 216 121 7 90 293 495 686 2.07e-12 70.5
Msa1144700 MtrunA17_Chr2g0293631 24.691 243 152 7 347 573 663 890 1.97e-11 67.4
Msa1144700 MtrunA17_Chr8g0354761 27.742 155 99 2 114 268 31 172 2.17e-12 69.3
Msa1144700 MtrunA17_Chr8g0347171 28.218 202 117 6 82 274 158 340 2.94e-12 69.3
Msa1144700 MtrunA17_Chr2g0310581 34.921 126 77 2 425 549 290 411 3.26e-12 68.9
Msa1144700 MtrunA17_Chr2g0310581 26.577 222 147 6 91 309 53 261 1.56e-11 67.0
Msa1144700 MtrunA17_Chr7g0271121 37.607 117 69 3 437 551 354 468 5.00e-12 68.9
Msa1144700 MtrunA17_Chr6g0461751 28.230 209 123 7 90 289 139 329 5.58e-12 68.6
Msa1144700 MtrunA17_Chr1g0200181 25.248 202 133 4 345 544 320 505 1.30e-11 67.4
Msa1144700 MtrunA17_Chr4g0074521 25.571 219 132 6 324 527 239 441 1.56e-11 67.0
Msa1144700 MtrunA17_Chr3g0095031 33.621 116 75 2 437 551 336 450 2.48e-11 66.2
Msa1144700 MtrunA17_Chr1g0157691 24.752 202 134 4 345 544 322 507 2.96e-11 66.2
Msa1144700 MtrunA17_Chr4g0039471 27.523 218 123 5 87 293 219 412 3.21e-11 65.5
Msa1144700 MtrunA17_Chr1g0193491 35.115 131 78 4 431 560 360 484 5.86e-11 65.5
Msa1144700 MtrunA17_Chr1g0193491 23.014 365 246 8 4 362 33 368 8.65e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144700 AT1G59990.2 58.846 520 195 7 68 578 58 567 0.0 596
Msa1144700 AT1G59990.1 58.574 519 196 7 68 577 58 566 0.0 592
Msa1144700 AT2G40700.1 26.809 470 268 16 89 532 29 448 1.87e-28 120
Msa1144700 AT4G34910.1 30.864 243 143 6 91 328 47 269 8.84e-21 97.1
Msa1144700 AT4G09730.1 30.653 199 121 5 358 552 304 489 3.91e-18 88.6
Msa1144700 AT4G09730.1 30.000 190 118 6 91 276 113 291 6.60e-17 84.7
Msa1144700 AT5G63120.2 32.836 134 85 2 437 565 412 545 2.49e-16 82.8
Msa1144700 AT5G63120.2 26.425 193 125 4 104 293 179 357 1.69e-12 70.5
Msa1144700 AT5G08610.1 30.233 215 130 7 64 273 363 562 5.69e-16 82.0
Msa1144700 AT4G16630.1 30.374 214 114 9 76 275 148 340 1.07e-15 81.3
Msa1144700 AT4G16630.1 34.783 115 72 2 437 549 414 527 1.47e-12 71.2
Msa1144700 AT3G18600.1 27.426 237 150 7 89 318 88 309 1.35e-15 80.5
Msa1144700 AT3G18600.1 37.634 93 57 1 437 528 336 428 2.06e-13 73.6
Msa1144700 AT2G42520.2 27.749 191 130 4 357 546 347 530 1.36e-15 80.5
Msa1144700 AT2G42520.1 27.749 191 130 4 357 546 347 530 1.36e-15 80.5
Msa1144700 AT2G42520.3 27.749 191 130 4 357 546 347 530 1.36e-15 80.5
Msa1144700 AT1G55150.1 31.098 164 97 4 427 577 339 499 1.62e-15 80.1
Msa1144700 AT1G55150.1 24.766 214 144 4 91 301 100 299 4.12e-12 69.3
Msa1144700 AT1G77030.1 28.037 214 133 4 92 301 30 226 1.67e-15 80.5
Msa1144700 AT1G55150.2 31.098 164 97 4 427 577 364 524 1.99e-15 79.7
Msa1144700 AT1G55150.2 24.766 214 144 4 91 301 125 324 4.27e-12 69.3
Msa1144700 AT5G08620.1 27.863 262 161 9 58 313 55 294 2.03e-15 79.7
Msa1144700 AT1G31970.1 37.600 125 73 2 436 555 367 491 2.07e-15 79.7
Msa1144700 AT5G65900.1 26.471 238 151 6 89 318 153 374 2.44e-15 79.7
Msa1144700 AT5G65900.1 30.233 129 85 3 434 560 399 524 6.75e-13 72.0
Msa1144700 AT1G12770.2 27.895 190 122 5 91 273 111 292 6.88e-15 78.2
Msa1144700 AT1G12770.1 27.895 190 122 5 91 273 111 292 6.88e-15 78.2
Msa1144700 AT5G63630.2 28.986 207 120 7 79 274 239 429 6.89e-15 78.6
Msa1144700 AT4G00660.1 34.646 127 80 2 435 560 368 492 9.57e-15 77.4
Msa1144700 AT4G00660.2 34.646 127 80 2 435 560 368 492 9.57e-15 77.4
Msa1144700 AT3G58570.1 37.168 113 70 1 431 542 401 513 1.07e-14 77.8
Msa1144700 AT3G58510.1 37.615 109 67 1 438 545 411 519 1.22e-14 77.4
Msa1144700 AT3G58510.3 37.615 109 67 1 438 545 411 519 1.22e-14 77.4
Msa1144700 AT3G58510.2 37.615 109 67 1 438 545 411 519 1.22e-14 77.4
Msa1144700 AT5G63630.1 28.986 207 120 7 79 274 45 235 1.32e-14 77.0
Msa1144700 AT2G45810.1 35.714 112 67 2 435 543 391 500 1.46e-14 77.0
Msa1144700 AT5G14610.6 26.165 279 173 7 26 293 96 352 2.07e-14 77.0
Msa1144700 AT5G14610.2 26.165 279 173 7 26 293 96 352 2.16e-14 76.6
Msa1144700 AT5G14610.5 26.165 279 173 7 26 293 104 360 2.40e-14 76.6
Msa1144700 AT5G60990.1 29.231 195 122 6 91 277 10 196 2.51e-14 75.9
Msa1144700 AT5G60990.1 36.364 110 65 2 438 544 263 370 4.78e-13 72.0
Msa1144700 AT5G14610.4 28.230 209 128 5 90 293 169 360 3.76e-14 75.5
Msa1144700 AT2G33730.1 38.053 113 69 1 434 545 575 687 4.62e-14 75.9
Msa1144700 AT2G33730.1 28.796 191 118 7 91 276 314 491 1.57e-13 74.3
Msa1144700 AT3G61240.2 34.545 110 71 1 435 543 361 470 6.35e-14 74.7
Msa1144700 AT3G61240.1 34.545 110 71 1 435 543 361 470 6.35e-14 74.7
Msa1144700 AT1G16280.1 30.275 218 136 7 345 560 223 426 7.75e-14 74.7
Msa1144700 AT3G06980.1 27.568 185 118 4 358 530 560 740 2.90e-13 73.6
Msa1144700 AT2G07750.1 28.492 179 116 4 103 276 388 559 5.30e-13 72.4
Msa1144700 AT3G02065.3 28.365 208 135 6 79 283 99 295 7.00e-13 71.6
Msa1144700 AT3G02065.2 28.365 208 135 6 79 283 99 295 7.00e-13 71.6
Msa1144700 AT3G09620.2 23.039 204 135 4 92 288 399 587 1.43e-12 71.2
Msa1144700 AT3G09620.1 23.039 204 135 4 92 288 398 586 1.47e-12 71.2
Msa1144700 AT3G01540.1 27.723 202 128 6 90 288 158 344 1.95e-12 70.5
Msa1144700 AT3G01540.4 27.723 202 128 6 90 288 158 344 2.11e-12 70.5
Msa1144700 AT3G01540.2 27.723 202 128 6 90 288 158 344 2.11e-12 70.5
Msa1144700 AT3G01540.3 27.723 202 128 6 90 288 158 344 2.11e-12 70.5
Msa1144700 AT1G63250.1 28.492 179 116 4 103 276 341 512 2.11e-12 70.5
Msa1144700 AT5G63120.1 26.425 193 125 4 104 293 179 357 2.25e-12 70.1
Msa1144700 AT5G63120.3 26.425 193 125 4 104 293 179 357 2.60e-12 69.7
Msa1144700 AT5G63120.4 26.425 193 125 4 104 293 179 357 2.60e-12 69.7
Msa1144700 AT5G63120.5 26.425 193 125 4 104 293 179 357 2.60e-12 69.7
Msa1144700 AT5G14610.1 27.919 197 120 5 102 293 241 420 3.88e-12 69.7
Msa1144700 AT5G14610.7 28.421 190 114 5 109 293 49 221 4.82e-12 68.9
Msa1144700 AT5G14610.3 28.421 190 114 5 109 293 49 221 4.82e-12 68.9
Msa1144700 AT1G20920.2 22.500 200 141 4 92 288 193 381 2.70e-11 67.0
Msa1144700 AT1G20920.4 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT1G20920.6 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT1G20920.3 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT1G20920.7 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT1G20920.5 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT1G20920.1 21.762 193 129 4 92 277 531 708 3.31e-11 67.0
Msa1144700 AT3G06480.1 35.514 107 67 2 437 542 682 787 3.32e-11 67.0
Msa1144700 AT3G06480.1 27.830 212 125 8 90 293 435 626 5.67e-11 66.2
Msa1144700 AT3G22330.1 35.484 93 59 1 460 551 373 465 3.45e-11 66.6
Msa1144700 AT1G71370.1 29.255 188 110 6 97 276 23 195 4.64e-11 65.9
Msa1144700 AT5G26742.1 37.607 117 69 3 437 551 353 467 7.43e-11 65.5
Msa1144700 AT5G26742.2 37.607 117 69 3 437 551 353 467 7.44e-11 65.5
Msa1144700 AT2G47330.1 25.243 206 127 6 91 288 229 415 7.50e-11 65.5
Msa1144700 AT1G71280.1 28.649 185 107 6 97 276 24 188 7.50e-11 65.1
Msa1144700 AT5G51280.1 30.556 108 74 1 438 544 400 507 8.47e-11 65.1
Msa1144700 AT3G06480.2 27.830 212 125 8 90 293 435 626 9.42e-11 65.5
Msa1144700 AT1G28180.1 32.000 125 83 2 429 551 211 335 9.44e-11 64.3

Find 124 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGCTTCGTTATTAATAT+TGG 0.230748 7_4:+21073477 None:intergenic
AAATCGGAAGATTTGGATAA+TGG 0.257182 7_4:-21072052 Msa1144700:CDS
TGAAATGAAATATAGGGTTT+TGG 0.258830 7_4:+21075428 Msa1144710:intron
TCAGGCGGATTACTTTATTC+TGG 0.310873 7_4:+21073671 None:intergenic
GTGAAGATATTGGGCTATGC+TGG 0.320318 7_4:-21071971 Msa1144700:CDS
CAGTTTAAAATCGGAAGATT+TGG 0.325357 7_4:-21072059 Msa1144700:CDS
GGGTACCGAGGAACATTCTT+TGG 0.339218 7_4:-21074310 Msa1144700:CDS
GAAATGGTGAAATGAAATAT+AGG 0.339392 7_4:+21075421 Msa1144710:intron
TGAAGCTGTGGTGAAGATAT+TGG 0.342460 7_4:-21071981 Msa1144700:CDS
TGGACCAGGGATGGCCAATT+CGG 0.344742 7_4:-21073947 Msa1144700:intron
AAATGTCTCTCATGTTATTC+AGG 0.347538 7_4:-21071822 Msa1144700:intron
TCTATACCATCTGTGTTGTC+AGG 0.367531 7_4:-21074411 Msa1144700:CDS
CAATACACCCTCTCTCGTTC+AGG 0.382589 7_4:-21075043 Msa1144700:intron
ATGATATCAGGTTCCCGAAT+TGG 0.387726 7_4:+21073933 None:intergenic
CACAAGTGAAAGAGCTCATA+AGG 0.389324 7_4:-21072093 Msa1144700:CDS
GTAGATGCTGTTCGTCGTGC+AGG 0.390681 7_4:-21070176 Msa1144700:CDS
GAGAGAAGAAGAGAAATTGA+TGG 0.392917 7_4:+21075316 None:intergenic
GGACCAGGGATGGCCAATTC+GGG 0.395111 7_4:-21073946 Msa1144700:intron
CCTGATGCTGAGTGGGTTAG+TGG 0.398187 7_4:-21073319 Msa1144700:CDS
TGCTCACACAATTGCACATT+CGG 0.402499 7_4:+21074228 None:intergenic
AACGTTTCGTGGAGTTCAAT+TGG 0.403977 7_4:-21075108 Msa1144700:CDS
CAGCAGACACAGCCCTTTGT+TGG 0.404616 7_4:-21075186 Msa1144700:CDS
CACTACCTGTTTCCCACAAA+TGG 0.406579 7_4:+21074143 None:intergenic
TGCAGCCATTTGTGGGAAAC+AGG 0.410751 7_4:-21074148 Msa1144700:intron
TGCTGGTAACTAGTCCGATT+TGG 0.414486 7_4:+21070225 None:intergenic
CATAGCGGAGCAAGTTAATC+AGG 0.424888 7_4:+21073653 None:intergenic
TTAGTTGATTTCTACGACAA+AGG 0.431692 7_4:-21071893 Msa1144700:CDS
TTTCCAGATTGAAGCAAAGA+TGG 0.439295 7_4:-21072135 Msa1144700:intron
TGAATAACATGAGAGACATT+TGG 0.442425 7_4:+21071824 None:intergenic
TCGTCTGACATGGCTTCAAT+TGG 0.443242 7_4:+21073526 None:intergenic
GTTCGTCGTGCAGGGGAACT+CGG 0.444099 7_4:-21070167 Msa1144700:CDS
TACAAGCTCTCTGTTGGATT+CGG 0.447095 7_4:+21070196 None:intergenic
AAATGGTGAAATGAAATATA+GGG 0.448148 7_4:+21075422 Msa1144710:intron
CCACTAACCCACTCAGCATC+AGG 0.455201 7_4:+21073319 None:intergenic
TGTGAATCACAGTTTAAAAT+CGG 0.456195 7_4:-21072068 Msa1144700:CDS
TTGCTGAAGATAACGTTTCG+TGG 0.460674 7_4:-21075119 Msa1144700:CDS
TGCAGGAGACCGCATTTAGC+AGG 0.463069 7_4:-21069936 Msa1144700:intron
ATTGTAATCTTCTGATGAAA+CGG 0.467873 7_4:+21075158 None:intergenic
GTTAGTGCTGCAGCCATTTG+TGG 0.471920 7_4:-21074156 Msa1144700:CDS
GAAGCTGTGGTGAAGATATT+GGG 0.484895 7_4:-21071980 Msa1144700:CDS
ACAGCTAGAGCTGGCCAAAT+CGG 0.486615 7_4:-21070239 Msa1144700:CDS
CTTTGCAAACAAGACAGAAA+TGG 0.486813 7_4:+21075405 Msa1144710:intron
AGAAATGACCTGAACGAGAG+AGG 0.490122 7_4:+21075035 None:intergenic
TCTGCTGTGTTTGACGTGGA+AGG 0.490250 7_4:+21075202 None:intergenic
AGCATCTACAAGCTCTCTGT+TGG 0.491017 7_4:+21070190 None:intergenic
AATTGTGTGAGCAGGTAGTT+AGG 0.493726 7_4:-21074218 Msa1144700:CDS
TATTAGAGAGAGCTCGAGAA+AGG 0.494225 7_4:+21075073 None:intergenic
GAATTGCACGTTGGATGAGC+GGG 0.497408 7_4:-21071924 Msa1144700:CDS
TAGATGCTGTTCGTCGTGCA+GGG 0.499759 7_4:-21070175 Msa1144700:CDS
GGTGTTGTCACAATGATATC+AGG 0.504804 7_4:+21073921 None:intergenic
GCAGCTACACTTCCGGTGAA+TGG 0.505831 7_4:-21073379 Msa1144700:CDS
AAGCACGAGCAGAACTCTCC+TGG 0.509002 7_4:+21074254 None:intergenic
TGAAGATATTGGGCTATGCT+GGG 0.514289 7_4:-21071970 Msa1144700:CDS
CGTTGATAGAAGACGCCGCA+TGG 0.515325 7_4:-21073874 Msa1144700:CDS
GTAGTTATTGCTGCAGAGAC+CGG 0.517794 7_4:-21074381 Msa1144700:CDS
TCAAGAAAACAAGAAGAGAC+TGG 0.518017 7_4:-21073450 Msa1144700:CDS
TCCTCTCATTGATAAGCTGA+GGG 0.520061 7_4:-21074331 Msa1144700:CDS
AAGAAGTCTCTCCGCCGGCC+AGG 0.524452 7_4:-21074272 Msa1144700:CDS
CTCTTTCACTTGTGTATCAA+CGG 0.530314 7_4:+21072102 None:intergenic
TATGCATGGTGTTAAATATG+TGG 0.531983 7_4:-21073847 Msa1144700:intron
AGACGAAGACGAAGATAAAG+TGG 0.535109 7_4:+21075266 None:intergenic
AAAGAAGATTCCGATGTCAC+TGG 0.536633 7_4:+21073586 None:intergenic
ATCTTCATTGTCACAATCCA+AGG 0.537346 7_4:-21073291 Msa1144700:intron
GTGAATGGAAAGAAAACAGC+GGG 0.540547 7_4:-21073364 Msa1144700:CDS
GTTGGATTCGGTATACATGC+TGG 0.545852 7_4:+21070208 None:intergenic
AGAAATTGATGGTAGCGAAT+CGG 0.548812 7_4:+21075327 None:intergenic
TGAAACGGCGCTTCCAACAA+AGG 0.551644 7_4:+21075173 None:intergenic
TGATGCAGCTGCTCGTGGCG+TGG 0.557135 7_4:-21071852 Msa1144700:CDS
ACATGATTGAGAAGAGCAGC+AGG 0.557430 7_4:+21073900 None:intergenic
TTCAACAGCCTCAACTGTGT+TGG 0.557717 7_4:+21072000 None:intergenic
GAAATGACCTGAACGAGAGA+GGG 0.559297 7_4:+21075036 None:intergenic
ATCAGAGTTGCCAGTGACAT+CGG 0.560123 7_4:-21073596 Msa1144700:CDS
ACCATCTGTGTTGTCAGGGA+AGG 0.560442 7_4:-21074406 Msa1144700:CDS
CTATACCATCTGTGTTGTCA+GGG 0.560940 7_4:-21074410 Msa1144700:CDS
CTGCTGTGTTTGACGTGGAA+GGG 0.561981 7_4:+21075203 None:intergenic
TTAGTGCTGCAGCCATTTGT+GGG 0.562083 7_4:-21074155 Msa1144700:CDS
GAAACGGCGCTTCCAACAAA+GGG 0.565869 7_4:+21075174 None:intergenic
TTCCTCTCATTGATAAGCTG+AGG 0.566977 7_4:-21074332 Msa1144700:CDS
ACAAGTGAAAGAGCTCATAA+GGG 0.567146 7_4:-21072092 Msa1144700:CDS
ATTAGAGAGAGCTCGAGAAA+GGG 0.568016 7_4:+21075074 None:intergenic
ATCATCCTCCTCGTCTGACA+TGG 0.569854 7_4:+21073516 None:intergenic
ATTGCTGCAGAGACCGGCAG+TGG 0.572069 7_4:-21074375 Msa1144700:CDS
ACTGTATGTCTTACCACTGC+CGG 0.574756 7_4:+21074362 None:intergenic
GAAGATTTGGATAATGGTGG+TGG 0.580546 7_4:-21072046 Msa1144700:CDS
GTGTGAGCAGGTAGTTAGGA+TGG 0.586604 7_4:-21074214 Msa1144700:CDS
AGCAGAACTCTCCTGGCCGG+CGG 0.588505 7_4:+21074261 None:intergenic
CGCCGCATGGAATTTATGCA+TGG 0.588650 7_4:-21073861 Msa1144700:CDS
TGATAAAGAAGTCTCTCCGC+CGG 0.597198 7_4:-21074277 Msa1144700:CDS
CATGTTTCCTGATGCTGAGT+GGG 0.603761 7_4:-21073326 Msa1144700:CDS
TTGTCGCATGATGCTTCAGA+AGG 0.608090 7_4:-21073562 Msa1144700:CDS
CCCCTCAGCTTATCAATGAG+AGG 0.609403 7_4:+21074330 None:intergenic
TCGGAAGATTTGGATAATGG+TGG 0.610027 7_4:-21072049 Msa1144700:CDS
TGTACTGATGCAGCTGCTCG+TGG 0.611822 7_4:-21071857 Msa1144700:CDS
AACATCCAAAGAATGTTCCT+CGG 0.612515 7_4:+21074305 None:intergenic
TGAAGCCATGTCAGACGAGG+AGG 0.613709 7_4:-21073521 Msa1144700:CDS
ATTGGTCGTACAGCTAGAGC+TGG 0.616027 7_4:-21070248 Msa1144700:CDS
AGAATTGCACGTTGGATGAG+CGG 0.619703 7_4:-21071925 Msa1144700:CDS
TCCTTCCCTGACAACACAGA+TGG 0.620342 7_4:+21074405 None:intergenic
GAATGTGCAATTGTGTGAGC+AGG 0.621794 7_4:-21074226 Msa1144700:CDS
AAGCTGATATGCTTCTCTGT+GGG 0.625330 7_4:-21073699 Msa1144700:CDS
TGATGCTTCAGAAGGTGAAG+AGG 0.626535 7_4:-21073554 Msa1144700:CDS
AATGGCTGCAGCACTAACAA+TGG 0.628494 7_4:+21074161 None:intergenic
GACGAAGACGAAGATAAAGT+GGG 0.628815 7_4:+21075267 None:intergenic
ACGAGCAGAACTCTCCTGGC+CGG 0.632890 7_4:+21074258 None:intergenic
GTTGATTTCTACGACAAAGG+TGG 0.637199 7_4:-21071890 Msa1144700:CDS
CGAGGAGGATGATGATAACG+AGG 0.644815 7_4:-21073506 Msa1144700:CDS
AGATGCTGTTCGTCGTGCAG+GGG 0.648856 7_4:-21070174 Msa1144700:CDS
AATTGAAGCCATGTCAGACG+AGG 0.652612 7_4:-21073524 Msa1144700:CDS
TGATAAGCTGAGGGGTACCG+AGG 0.652680 7_4:-21074322 Msa1144700:CDS
GAAGAGACTGGAGAAGAGTG+AGG 0.655513 7_4:-21073438 Msa1144700:CDS
GTTTCATCAGAAGATTACAA+TGG 0.662414 7_4:-21075156 Msa1144700:CDS
AGGGGAACTCGGTCTACCTG+TGG 0.664526 7_4:-21070156 Msa1144700:intron
AGCGGAGCAAGTTAATCAGG+CGG 0.667625 7_4:+21073656 None:intergenic
TGTGTCTGCTGTGTTTGACG+TGG 0.669758 7_4:+21075198 None:intergenic
AGTTGAGGCTGTTGAAGCTG+TGG 0.675682 7_4:-21071993 Msa1144700:CDS
TTATCATAAGAATTGCACGT+TGG 0.677936 7_4:-21071933 Msa1144700:CDS
GAAGCTGATATGCTTCTCTG+TGG 0.683524 7_4:-21073700 Msa1144700:CDS
ACATGTTTCCTGATGCTGAG+TGG 0.696080 7_4:-21073327 Msa1144700:CDS
CACCATGCATAAATTCCATG+CGG 0.706774 7_4:+21073859 None:intergenic
AGGATGGCTAATAGTCTCTG+TGG 0.708474 7_4:-21074198 Msa1144700:CDS
GGTGTTTGCCAACACAGTTG+AGG 0.709075 7_4:-21072008 Msa1144700:CDS
TGGTGGCATTCATAGAACAA+TGG 0.741830 7_4:-21072029 Msa1144700:CDS
CCTCTCATTGATAAGCTGAG+GGG 0.743401 7_4:-21074330 Msa1144700:CDS
GGTGAATGGAAAGAAAACAG+CGG 0.768400 7_4:-21073365 Msa1144700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAACTAATTGAAAA+TGG - chr7_4:21070430-21070449 Msa1144700:intron 10.0%
!! AAATATAAACATACATAAAT+AGG + chr7_4:21071604-21071623 None:intergenic 10.0%
!!! TATATTTTCTAATTTCTAAT+TGG - chr7_4:21071617-21071636 Msa1144700:intron 10.0%
!!! TAAATTTTGTAATTAATCAA+CGG + chr7_4:21074659-21074678 None:intergenic 10.0%
!!! TTTTATTTTTATATAACCTT+AGG - chr7_4:21074987-21075006 Msa1144700:intron 10.0%
!! ATCAAAAAATATTTATACAT+TGG - chr7_4:21075261-21075280 Msa1144700:CDS 10.0%
!! TCAAAAAATATTTATACATT+GGG - chr7_4:21075262-21075281 Msa1144700:CDS 10.0%
!! ATAAGCAAATTAATACAATA+AGG + chr7_4:21070715-21070734 None:intergenic 15.0%
!!! TTTGTTTTTATTCTTCTATT+CGG - chr7_4:21070862-21070881 Msa1144700:intron 15.0%
!! TTATAGTTATATGAAATTTG+TGG - chr7_4:21071291-21071310 Msa1144700:intron 15.0%
!!! ATTGATAATAAGTACAAAAA+GGG + chr7_4:21072100-21072119 None:intergenic 15.0%
!!! TATTGATAATAAGTACAAAA+AGG + chr7_4:21072101-21072120 None:intergenic 15.0%
!! TATAACTTATAACATGTAAA+AGG + chr7_4:21073565-21073584 None:intergenic 15.0%
!!! TTTTACATGTTATAAGTTAT+AGG - chr7_4:21073564-21073583 Msa1144700:CDS 15.0%
!! TAATTAAACTTATAGGAATT+AGG - chr7_4:21073877-21073896 Msa1144700:CDS 15.0%
!! ATGTAATATACATTATTTCA+TGG - chr7_4:21074799-21074818 Msa1144700:intron 15.0%
!! ATAATAAAATATAACACCTA+AGG + chr7_4:21075006-21075025 None:intergenic 15.0%
!! AAATGGTGAAATGAAATATA+GGG + chr7_4:21069933-21069952 None:intergenic 20.0%
!! TAAAAAAACAGAAATATAGC+AGG + chr7_4:21070363-21070382 None:intergenic 20.0%
!!! AATCAAATTTAGAACATACA+GGG + chr7_4:21070411-21070430 None:intergenic 20.0%
!!! AAATCAAATTTAGAACATAC+AGG + chr7_4:21070412-21070431 None:intergenic 20.0%
!!! TTTTCTAATTTCTAATTGGT+AGG - chr7_4:21071621-21071640 Msa1144700:intron 20.0%
!!! TTGATAATAAGTACAAAAAG+GGG + chr7_4:21072099-21072118 None:intergenic 20.0%
!!! ATTCAATTTTCTTTTCTACT+TGG - chr7_4:21072125-21072144 Msa1144700:CDS 20.0%
!! AACTAATTGTATGCTAATAA+TGG + chr7_4:21072819-21072838 None:intergenic 20.0%
!!! CTTAAATTTTGAAAGTTCTT+GGG - chr7_4:21073604-21073623 Msa1144700:CDS 20.0%
!! TCTATAAAAATGCACAAATT+CGG + chr7_4:21074119-21074138 None:intergenic 20.0%
!!! TAGACAATTTTCTTTGTAAT+TGG - chr7_4:21074135-21074154 Msa1144700:intron 20.0%
!! GGATTCAATTAAAATAAGAA+CGG - chr7_4:21074156-21074175 Msa1144700:CDS 20.0%
!! ACAAAAGTAAAATTGTTTGT+TGG - chr7_4:21074260-21074279 Msa1144700:CDS 20.0%
!! CAAAAGTAAAATTGTTTGTT+GGG - chr7_4:21074261-21074280 Msa1144700:CDS 20.0%
!! ATATTACATAACATGATTTG+AGG + chr7_4:21074788-21074807 None:intergenic 20.0%
!!! CTTTCTTTTTTATCTTGTTA+CGG + chr7_4:21075453-21075472 Msa1144710:intron 20.0%
!! GAAATGAAATATAGGGTTTT+GGG + chr7_4:21069926-21069945 None:intergenic 25.0%
!! TGAAATGAAATATAGGGTTT+TGG + chr7_4:21069927-21069946 None:intergenic 25.0%
! GAAATGGTGAAATGAAATAT+AGG + chr7_4:21069934-21069953 None:intergenic 25.0%
! ATTGTAATCTTCTGATGAAA+CGG + chr7_4:21070197-21070216 None:intergenic 25.0%
!!! TGATTAATTAGCTTTAGTCA+AGG - chr7_4:21070460-21070479 Msa1144700:intron 25.0%
!!! TTACTCGGACTTTTTTTTAT+TGG - chr7_4:21070528-21070547 Msa1144700:intron 25.0%
! GGTAAGTTTAGATTATAACT+TGG - chr7_4:21070803-21070822 Msa1144700:intron 25.0%
!!! TTATTTCCTGATGCTATTTT+TGG - chr7_4:21071254-21071273 Msa1144700:intron 25.0%
!!! TCAGCACTAAAAATCTTTTT+TGG - chr7_4:21071385-21071404 Msa1144700:intron 25.0%
!!! TAAAAATCTTTTTTGGACCA+GGG - chr7_4:21071392-21071411 Msa1144700:intron 25.0%
! AAGACATATGAACTTAACAT+TGG - chr7_4:21071576-21071595 Msa1144700:intron 25.0%
! TTCAGCTTCGTTATTAATAT+TGG + chr7_4:21071878-21071897 None:intergenic 25.0%
! TGATAATAAGTACAAAAAGG+GGG + chr7_4:21072098-21072117 None:intergenic 25.0%
! CAAACATTACTAATTTACCA+AGG - chr7_4:21072271-21072290 Msa1144700:intron 25.0%
! TAATTTACCAAGGTAAAAGA+TGG - chr7_4:21072281-21072300 Msa1144700:intron 25.0%
! TTCTTCAATTTAAGTAAACC+TGG + chr7_4:21072415-21072434 None:intergenic 25.0%
!!! TGATTGTTTTTCAGTTTGAA+TGG - chr7_4:21072476-21072495 Msa1144700:intron 25.0%
! TTCATCTGTCTCAAAATAAT+AGG - chr7_4:21072659-21072678 Msa1144700:intron 25.0%
! TTCTTATACAAATACCACAT+AGG - chr7_4:21072858-21072877 Msa1144700:intron 25.0%
! AGAATAAAATAGAAAGAGTG+TGG + chr7_4:21072931-21072950 None:intergenic 25.0%
! TTAGTAGTTGTTAGTTAGAA+GGG + chr7_4:21072978-21072997 None:intergenic 25.0%
!! TGTGAATCACAGTTTAAAAT+CGG - chr7_4:21073284-21073303 Msa1144700:intron 25.0%
!!! GCTTAAATTTTGAAAGTTCT+TGG - chr7_4:21073603-21073622 Msa1144700:CDS 25.0%
!!! CATTTTGCAGTTTTATTTCT+GGG + chr7_4:21074078-21074097 None:intergenic 25.0%
! CAAATCAAGAGAAATGATTA+GGG + chr7_4:21074355-21074374 None:intergenic 25.0%
! ACAAATCAAGAGAAATGATT+AGG + chr7_4:21074356-21074375 None:intergenic 25.0%
! AGAATTATTAGAAGAAGCAA+AGG + chr7_4:21074441-21074460 None:intergenic 25.0%
! TCTTCTAATAATTCTTCAGA+CGG - chr7_4:21074446-21074465 Msa1144700:intron 25.0%
!! GTTTATAATTAAGGGTACAA+TGG + chr7_4:21074626-21074645 None:intergenic 25.0%
! CGGATTGAGTTTATAATTAA+GGG + chr7_4:21074634-21074653 None:intergenic 25.0%
! CCTTAATTATAAACTCAATC+CGG - chr7_4:21074632-21074651 Msa1144700:intron 25.0%
!!! AAATTTAAAAAGCACTTGCA+AGG - chr7_4:21074672-21074691 Msa1144700:intron 25.0%
!! ATATCAATGACTTGTATAGT+TGG + chr7_4:21075354-21075373 None:intergenic 25.0%
!! TTTGATAGATTCCAACATTT+TGG - chr7_4:21075373-21075392 Msa1144700:CDS 25.0%
! CGTAACAAGATAAAAAAGAA+AGG - chr7_4:21075451-21075470 Msa1144700:five_prime_UTR 25.0%
!! GAATCGGTGAATTTTGAAAA+TGG + chr7_4:21070012-21070031 None:intergenic 30.0%
GTTTCATCAGAAGATTACAA+TGG - chr7_4:21070196-21070215 Msa1144700:CDS 30.0%
AAAACAGAAATATAGCAGGA+AGG + chr7_4:21070359-21070378 None:intergenic 30.0%
TTTGTTGGAACAACTTTACT+CGG - chr7_4:21070513-21070532 Msa1144700:intron 30.0%
TTGTAGTTATCAGTTTCAAG+TGG + chr7_4:21070575-21070594 None:intergenic 30.0%
ACTTGTGTCAAGAATGAAAT+TGG - chr7_4:21070781-21070800 Msa1144700:intron 30.0%
CTTGTGTCAAGAATGAAATT+GGG - chr7_4:21070782-21070801 Msa1144700:intron 30.0%
AGATAACCAAAAATAGCATC+AGG + chr7_4:21071263-21071282 None:intergenic 30.0%
!!! CTAAAAATCTTTTTTGGACC+AGG - chr7_4:21071391-21071410 Msa1144700:intron 30.0%
! TATGCATGGTGTTAAATATG+TGG - chr7_4:21071505-21071524 Msa1144700:intron 30.0%
! ACAAGAGTTTTTCATCATAG+CGG + chr7_4:21071717-21071736 None:intergenic 30.0%
TGGGCAATAAATTCTAAACT+TGG + chr7_4:21072325-21072344 None:intergenic 30.0%
TATTCATCTAAGTCTCTCAT+GGG + chr7_4:21072344-21072363 None:intergenic 30.0%
!! TAGTATGTCACTTTGTAACA+AGG - chr7_4:21072749-21072768 Msa1144700:intron 30.0%
GTTAAACAGTGAATTTGAGT+GGG + chr7_4:21072906-21072925 None:intergenic 30.0%
CACTCAAATTCACTGTTTAA+CGG - chr7_4:21072905-21072924 Msa1144700:intron 30.0%
GTTAGTAGTTGTTAGTTAGA+AGG + chr7_4:21072979-21072998 None:intergenic 30.0%
! TCTCACTCCTTATTCTTTTT+CGG - chr7_4:21073035-21073054 Msa1144700:intron 30.0%
TTTCCTCTTTACATGTCTAA+TGG - chr7_4:21073058-21073077 Msa1144700:intron 30.0%
TTCCTCTTTACATGTCTAAT+GGG - chr7_4:21073059-21073078 Msa1144700:intron 30.0%
TCAAAGATGTTGTGCATATA+TGG + chr7_4:21073098-21073117 None:intergenic 30.0%
! CAGTTTAAAATCGGAAGATT+TGG - chr7_4:21073293-21073312 Msa1144700:CDS 30.0%
AAATCGGAAGATTTGGATAA+TGG - chr7_4:21073300-21073319 Msa1144700:CDS 30.0%
TTATCATAAGAATTGCACGT+TGG - chr7_4:21073419-21073438 Msa1144700:CDS 30.0%
! TTAGTTGATTTCTACGACAA+AGG - chr7_4:21073459-21073478 Msa1144700:CDS 30.0%
TGAATAACATGAGAGACATT+TGG + chr7_4:21073531-21073550 None:intergenic 30.0%
AAATGTCTCTCATGTTATTC+AGG - chr7_4:21073530-21073549 Msa1144700:CDS 30.0%
! AGAAAAGGTGTAGTGTTAAT+TGG + chr7_4:21073762-21073781 None:intergenic 30.0%
! TGTCGTTTGTCAATCATTTA+AGG - chr7_4:21074051-21074070 Msa1144700:intron 30.0%
!!! GCATTTTGCAGTTTTATTTC+TGG + chr7_4:21074079-21074098 None:intergenic 30.0%
ATAAAAATGCACAAATTCGG+AGG + chr7_4:21074116-21074135 None:intergenic 30.0%
AATGTTTATCAGTGTTTCTC+TGG - chr7_4:21074316-21074335 Msa1144700:CDS 30.0%
TTGAAGATCTTTGGTGAAAA+GGG + chr7_4:21074400-21074419 None:intergenic 30.0%
ATTGAAGATCTTTGGTGAAA+AGG + chr7_4:21074401-21074420 None:intergenic 30.0%
CCGGATTGAGTTTATAATTA+AGG + chr7_4:21074635-21074654 None:intergenic 30.0%
TTTGTAATTAATCAACGGTC+CGG + chr7_4:21074654-21074673 None:intergenic 30.0%
TATCATGTTTAAGTAGCGTT+TGG - chr7_4:21074702-21074721 Msa1144700:intron 30.0%
AATGAAGTGACTCAAATAAG+AGG + chr7_4:21074834-21074853 None:intergenic 30.0%
AAGAGTCACAATGTCATATA+GGG + chr7_4:21074857-21074876 None:intergenic 30.0%
TAAGAGTCACAATGTCATAT+AGG + chr7_4:21074858-21074877 None:intergenic 30.0%
! TATGCATCTAATTTTACCAC+AGG + chr7_4:21075215-21075234 None:intergenic 30.0%
!! ATGATGAGAGCATTAACTAT+AGG - chr7_4:21075306-21075325 Msa1144700:CDS 30.0%
TAACAATCACTCCAAAATGT+TGG + chr7_4:21075387-21075406 Msa1144710:intron 30.0%
GATTGTTACACTATTAATGC+AGG - chr7_4:21075399-21075418 Msa1144700:five_prime_UTR 30.0%
CTTTGCAAACAAGACAGAAA+TGG + chr7_4:21069950-21069969 None:intergenic 35.0%
! AGAAATTGATGGTAGCGAAT+CGG + chr7_4:21070028-21070047 None:intergenic 35.0%
GAGAGAAGAAGAGAAATTGA+TGG + chr7_4:21070039-21070058 None:intergenic 35.0%
TAGTCAAGGTTGAATTGATC+CGG - chr7_4:21070474-21070493 Msa1144700:intron 35.0%
! AAAGTTCGAAATTGGTTCTC+CGG + chr7_4:21070496-21070515 None:intergenic 35.0%
GAACCAATTTCGAACTTTGT+TGG - chr7_4:21070498-21070517 Msa1144700:intron 35.0%
GTTCCAACAAAGTTCGAAAT+TGG + chr7_4:21070504-21070523 None:intergenic 35.0%
ACAATGTCTTAGTTCAAACC+CGG - chr7_4:21070591-21070610 Msa1144700:intron 35.0%
!! AAGTCACAACTCTAAAACGA+TGG + chr7_4:21070765-21070784 None:intergenic 35.0%
TACACACACAGAAGAAGAAA+TGG + chr7_4:21070912-21070931 None:intergenic 35.0%
AACATCCAAAGAATGTTCCT+CGG + chr7_4:21071050-21071069 None:intergenic 35.0%
GGTTTACTACACTATATGTC+TGG - chr7_4:21071312-21071331 Msa1144700:intron 35.0%
TCAAGAAAACAAGAAGAGAC+TGG - chr7_4:21071902-21071921 Msa1144700:CDS 35.0%
ATCTTCATTGTCACAATCCA+AGG - chr7_4:21072061-21072080 Msa1144700:CDS 35.0%
TCAACTTCTGTCGTGAAATT+AGG - chr7_4:21072151-21072170 Msa1144700:intron 35.0%
! TCAGTGGTCGTATATCTTTT+TGG - chr7_4:21072189-21072208 Msa1144700:intron 35.0%
TATTGACAGTGCACAATCAA+TGG + chr7_4:21072218-21072237 None:intergenic 35.0%
! GTTCTTACCATCTTTTACCT+TGG + chr7_4:21072291-21072310 None:intergenic 35.0%
GTATTCATCTAAGTCTCTCA+TGG + chr7_4:21072345-21072364 None:intergenic 35.0%
AGAGACTTAGATGAATACCT+AGG - chr7_4:21072347-21072366 Msa1144700:intron 35.0%
CACTTATGATCATACTTCCT+AGG + chr7_4:21072367-21072386 None:intergenic 35.0%
! CTAGGAAGTATGATCATAAG+TGG - chr7_4:21072365-21072384 Msa1144700:intron 35.0%
GGATCTGTTTGACTAACTTA+AGG + chr7_4:21072394-21072413 None:intergenic 35.0%
TAAGTTAGTCAAACAGATCC+AGG - chr7_4:21072394-21072413 Msa1144700:intron 35.0%
CGTTAAACAGTGAATTTGAG+TGG + chr7_4:21072907-21072926 None:intergenic 35.0%
TTGTTAGTTAGAAGGGTGAA+GGG + chr7_4:21072971-21072990 None:intergenic 35.0%
GAGTGAGAGGAAATTAGTAA+AGG + chr7_4:21073023-21073042 None:intergenic 35.0%
GAAAAAGAATAAGGAGTGAG+AGG + chr7_4:21073036-21073055 None:intergenic 35.0%
GAGGAAACCGAAAAAGAATA+AGG + chr7_4:21073045-21073064 None:intergenic 35.0%
TTCCCATTAGACATGTAAAG+AGG + chr7_4:21073064-21073083 None:intergenic 35.0%
TTTCCAGATTGAAGCAAAGA+TGG - chr7_4:21073217-21073236 Msa1144700:intron 35.0%
TATCCATCTTTGCTTCAATC+TGG + chr7_4:21073223-21073242 None:intergenic 35.0%
CTCTTTCACTTGTGTATCAA+CGG + chr7_4:21073253-21073272 None:intergenic 35.0%
ACAAGTGAAAGAGCTCATAA+GGG - chr7_4:21073260-21073279 Msa1144700:intron 35.0%
GGTTGAGAACAAACAGAAAA+GGG - chr7_4:21073625-21073644 Msa1144700:CDS 35.0%
TCAGTGATGCATGTATACAT+TGG - chr7_4:21073950-21073969 Msa1144700:intron 35.0%
CAGTGATGCATGTATACATT+GGG - chr7_4:21073951-21073970 Msa1144700:intron 35.0%
AATGATTGACAAACGACAGA+GGG + chr7_4:21074049-21074068 None:intergenic 35.0%
AAATGATTGACAAACGACAG+AGG + chr7_4:21074050-21074069 None:intergenic 35.0%
! TTTTCATGATCAGAGCTAGT+TGG - chr7_4:21074210-21074229 Msa1144700:CDS 35.0%
TGAAGATCTTTGGTGAAAAG+GGG + chr7_4:21074399-21074418 None:intergenic 35.0%
AAGATCGCATTGAAGATCTT+TGG + chr7_4:21074409-21074428 None:intergenic 35.0%
GACTATGAAAGTAAGAGAGT+TGG + chr7_4:21074906-21074925 None:intergenic 35.0%
AAACAGTACAGTTGAAAGCA+TGG + chr7_4:21074954-21074973 None:intergenic 35.0%
! GTAGACTTTTTGCATAGGAT+TGG - chr7_4:21075086-21075105 Msa1144700:CDS 35.0%
!! TGGGTTTTAACAAGAGGAAG+AGG + chr7_4:21069907-21069926 None:intergenic 40.0%
!!! GGGTTTTGGGTTTTAACAAG+AGG + chr7_4:21069913-21069932 None:intergenic 40.0%
GACGAAGACGAAGATAAAGT+GGG + chr7_4:21070088-21070107 None:intergenic 40.0%
AGACGAAGACGAAGATAAAG+TGG + chr7_4:21070089-21070108 None:intergenic 40.0%
TTGCTGAAGATAACGTTTCG+TGG - chr7_4:21070233-21070252 Msa1144700:CDS 40.0%
AACGTTTCGTGGAGTTCAAT+TGG - chr7_4:21070244-21070263 Msa1144700:CDS 40.0%
ATTAGAGAGAGCTCGAGAAA+GGG + chr7_4:21070281-21070300 None:intergenic 40.0%
TATTAGAGAGAGCTCGAGAA+AGG + chr7_4:21070282-21070301 None:intergenic 40.0%
TGGTACTTGTCACTAGCATA+CGG + chr7_4:21070555-21070574 None:intergenic 40.0%
CAATGTCTTAGTTCAAACCC+GGG - chr7_4:21070592-21070611 Msa1144700:intron 40.0%
GAATGTTGATATTGCTAGGC+TGG + chr7_4:21070627-21070646 None:intergenic 40.0%
TCGGGAATGTTGATATTGCT+AGG + chr7_4:21070631-21070650 None:intergenic 40.0%
AGCATTACGGACTTCTTACT+CGG - chr7_4:21070655-21070674 Msa1144700:intron 40.0%
!! CACAACTCTAAAACGATGGT+TGG + chr7_4:21070761-21070780 None:intergenic 40.0%
TTCTTCTTCTGTGTGTGTAC+AGG - chr7_4:21070913-21070932 Msa1144700:intron 40.0%
TCTATACCATCTGTGTTGTC+AGG - chr7_4:21070941-21070960 Msa1144700:intron 40.0%
CTATACCATCTGTGTTGTCA+GGG - chr7_4:21070942-21070961 Msa1144700:intron 40.0%
TTCCTCTCATTGATAAGCTG+AGG - chr7_4:21071020-21071039 Msa1144700:intron 40.0%
TCCTCTCATTGATAAGCTGA+GGG - chr7_4:21071021-21071040 Msa1144700:intron 40.0%
TGCTCACACAATTGCACATT+CGG + chr7_4:21071127-21071146 None:intergenic 40.0%
AATTGTGTGAGCAGGTAGTT+AGG - chr7_4:21071134-21071153 Msa1144700:intron 40.0%
!!! AATCTTTTTTGGACCAGGGA+TGG - chr7_4:21071396-21071415 Msa1144700:intron 40.0%
ATGATATCAGGTTCCCGAAT+TGG + chr7_4:21071422-21071441 None:intergenic 40.0%
! GGTGTTGTCACAATGATATC+AGG + chr7_4:21071434-21071453 None:intergenic 40.0%
CACCATGCATAAATTCCATG+CGG + chr7_4:21071496-21071515 None:intergenic 40.0%
AAGCTGATATGCTTCTCTGT+GGG - chr7_4:21071653-21071672 Msa1144700:intron 40.0%
!! TCAGGCGGATTACTTTATTC+TGG + chr7_4:21071684-21071703 None:intergenic 40.0%
AAAGAAGATTCCGATGTCAC+TGG + chr7_4:21071769-21071788 None:intergenic 40.0%
! TTTTGTTGCAGCTACACTTC+CGG - chr7_4:21071966-21071985 Msa1144700:CDS 40.0%
!! GCTGTTTTCTTTCCATTCAC+CGG + chr7_4:21071988-21072007 None:intergenic 40.0%
GGTGAATGGAAAGAAAACAG+CGG - chr7_4:21071987-21072006 Msa1144700:CDS 40.0%
GTGAATGGAAAGAAAACAGC+GGG - chr7_4:21071988-21072007 Msa1144700:CDS 40.0%
CTGTCGTGAAATTAGGAAAG+TGG - chr7_4:21072158-21072177 Msa1144700:intron 40.0%
! GTGGTCGTATATCTTTTTGG+TGG - chr7_4:21072192-21072211 Msa1144700:intron 40.0%
TGCACTGTCAATAATGTGAC+AGG - chr7_4:21072225-21072244 Msa1144700:intron 40.0%
TAATGTGACAGGAATGTGTG+CGG - chr7_4:21072236-21072255 Msa1144700:intron 40.0%
GAAGGGAGACTATCAGTAAT+AGG + chr7_4:21072954-21072973 None:intergenic 40.0%
GTTGTTAGTTAGAAGGGTGA+AGG + chr7_4:21072972-21072991 None:intergenic 40.0%
CACAAGTGAAAGAGCTCATA+AGG - chr7_4:21073259-21073278 Msa1144700:intron 40.0%
! TCGGAAGATTTGGATAATGG+TGG - chr7_4:21073303-21073322 Msa1144700:CDS 40.0%
! GAAGATTTGGATAATGGTGG+TGG - chr7_4:21073306-21073325 Msa1144700:CDS 40.0%
TGGTGGCATTCATAGAACAA+TGG - chr7_4:21073323-21073342 Msa1144700:CDS 40.0%
TGAAGCTGTGGTGAAGATAT+TGG - chr7_4:21073371-21073390 Msa1144700:CDS 40.0%
GAAGCTGTGGTGAAGATATT+GGG - chr7_4:21073372-21073391 Msa1144700:CDS 40.0%
TGAAGATATTGGGCTATGCT+GGG - chr7_4:21073382-21073401 Msa1144700:CDS 40.0%
! GTTGATTTCTACGACAAAGG+TGG - chr7_4:21073462-21073481 Msa1144700:CDS 40.0%
GGGTTGAGAACAAACAGAAA+AGG - chr7_4:21073624-21073643 Msa1144700:CDS 40.0%
TGAGAACAAACAGAAAAGGG+AGG - chr7_4:21073628-21073647 Msa1144700:CDS 40.0%
! CACTACACCTTTTCTACTTG+CGG - chr7_4:21073767-21073786 Msa1144700:intron 40.0%
TCAATGTCCGCAAGTAGAAA+AGG + chr7_4:21073777-21073796 None:intergenic 40.0%
!! TAGGAAAGCATCTCCTACAT+AGG - chr7_4:21073896-21073915 Msa1144700:CDS 40.0%
!! AGGAAAGCATCTCCTACATA+GGG - chr7_4:21073897-21073916 Msa1144700:CDS 40.0%
CATCTCCTACATAGGGAATA+GGG - chr7_4:21073904-21073923 Msa1144700:CDS 40.0%
ATCTCCTACATAGGGAATAG+GGG - chr7_4:21073905-21073924 Msa1144700:CDS 40.0%
TACATGCATCACTGAGCAAA+TGG + chr7_4:21073945-21073964 None:intergenic 40.0%
TTTGTTGGGAGAATGAAGTG+TGG - chr7_4:21074275-21074294 Msa1144700:CDS 40.0%
TTGTTGGGAGAATGAAGTGT+GGG - chr7_4:21074276-21074295 Msa1144700:CDS 40.0%
TGGAGAAGGGAAAGGAAATT+GGG - chr7_4:21074480-21074499 Msa1144700:intron 40.0%
! GTTTGGTAACTTTCACACGA+TGG - chr7_4:21074719-21074738 Msa1144700:intron 40.0%
AAGAGAGTTGGATACATGCA+TGG + chr7_4:21074894-21074913 None:intergenic 40.0%
CAATGTTGTGCATGTGTTTC+AGG - chr7_4:21075043-21075062 Msa1144700:intron 40.0%
! CTGCTGTAGACTTTTTGCAT+AGG - chr7_4:21075081-21075100 Msa1144700:CDS 40.0%
TACAAGCTCTCTGTTGGATT+CGG + chr7_4:21075159-21075178 None:intergenic 40.0%
! GCTTCTTTTCCTGCTAAATG+CGG + chr7_4:21075428-21075447 Msa1144710:intron 40.0%
GAAATGACCTGAACGAGAGA+GGG + chr7_4:21070319-21070338 None:intergenic 45.0%
AGAAATGACCTGAACGAGAG+AGG + chr7_4:21070320-21070339 None:intergenic 45.0%
CATTCCCGAGCTAAGCATTA+CGG - chr7_4:21070642-21070661 Msa1144700:intron 45.0%
AAGTCCGTAATGCTTAGCTC+GGG + chr7_4:21070649-21070668 None:intergenic 45.0%
GAAGTCCGTAATGCTTAGCT+CGG + chr7_4:21070650-21070669 None:intergenic 45.0%
TTCTTCTATTCGGACTGCTG+AGG - chr7_4:21070872-21070891 Msa1144700:intron 45.0%
GTAGTTATTGCTGCAGAGAC+CGG - chr7_4:21070971-21070990 Msa1144700:intron 45.0%
ACTGTATGTCTTACCACTGC+CGG + chr7_4:21070993-21071012 None:intergenic 45.0%
CCTCTCATTGATAAGCTGAG+GGG - chr7_4:21071022-21071041 Msa1144700:intron 45.0%
TGATAAAGAAGTCTCTCCGC+CGG - chr7_4:21071075-21071094 Msa1144700:intron 45.0%
GAATGTGCAATTGTGTGAGC+AGG - chr7_4:21071126-21071145 Msa1144700:intron 45.0%
AGGATGGCTAATAGTCTCTG+TGG - chr7_4:21071154-21071173 Msa1144700:intron 45.0%
AATGGCTGCAGCACTAACAA+TGG + chr7_4:21071194-21071213 None:intergenic 45.0%
TTAGTGCTGCAGCCATTTGT+GGG - chr7_4:21071197-21071216 Msa1144700:intron 45.0%
CACTACCTGTTTCCCACAAA+TGG + chr7_4:21071212-21071231 None:intergenic 45.0%
ACATGATTGAGAAGAGCAGC+AGG + chr7_4:21071455-21071474 None:intergenic 45.0%
GAAGCTGATATGCTTCTCTG+TGG - chr7_4:21071652-21071671 Msa1144700:intron 45.0%
! CATAGCGGAGCAAGTTAATC+AGG + chr7_4:21071702-21071721 None:intergenic 45.0%
ATCAGAGTTGCCAGTGACAT+CGG - chr7_4:21071756-21071775 Msa1144700:intron 45.0%
TTGTCGCATGATGCTTCAGA+AGG - chr7_4:21071790-21071809 Msa1144700:intron 45.0%
TGATGCTTCAGAAGGTGAAG+AGG - chr7_4:21071798-21071817 Msa1144700:intron 45.0%
TCGTCTGACATGGCTTCAAT+TGG + chr7_4:21071829-21071848 None:intergenic 45.0%
AATTGAAGCCATGTCAGACG+AGG - chr7_4:21071828-21071847 Msa1144700:CDS 45.0%
ACATGTTTCCTGATGCTGAG+TGG - chr7_4:21072025-21072044 Msa1144700:CDS 45.0%
CATGTTTCCTGATGCTGAGT+GGG - chr7_4:21072026-21072045 Msa1144700:CDS 45.0%
AGGGGGAAAATATAGCACCT+TGG + chr7_4:21072081-21072100 None:intergenic 45.0%
AATACCACATAGGCAGTTCG+AGG - chr7_4:21072868-21072887 Msa1144700:intron 45.0%
TTGTGATATCCAACCCATCC+CGG - chr7_4:21073129-21073148 Msa1144700:intron 45.0%
! ACACTGTTTTCCAGTAGAGC+CGG + chr7_4:21073151-21073170 None:intergenic 45.0%
TTCAACAGCCTCAACTGTGT+TGG + chr7_4:21073355-21073374 None:intergenic 45.0%
GTGAAGATATTGGGCTATGC+TGG - chr7_4:21073381-21073400 Msa1144700:CDS 45.0%
AGAATTGCACGTTGGATGAG+CGG - chr7_4:21073427-21073446 Msa1144700:CDS 45.0%
GCATCTCCTACATAGGGAAT+AGG - chr7_4:21073903-21073922 Msa1144700:CDS 45.0%
AACTCCCCTATTCCCTATGT+AGG + chr7_4:21073912-21073931 None:intergenic 45.0%
ATCACTGAGCAAATGGTGCA+CGG + chr7_4:21073938-21073957 None:intergenic 45.0%
AAACCTGCTTCTTTCGCTCA+CGG + chr7_4:21074184-21074203 None:intergenic 45.0%
GCGAAAGAAGCAGGTTTCTA+TGG - chr7_4:21074187-21074206 Msa1144700:CDS 45.0%
ATTTCCTTTCCCTTCTCCAC+TGG + chr7_4:21074479-21074498 None:intergenic 45.0%
GTGGAGAAGGGAAAGGAAAT+TGG - chr7_4:21074479-21074498 Msa1144700:intron 45.0%
GGAGAAGGGAAAGGAAATTG+GGG - chr7_4:21074481-21074500 Msa1144700:intron 45.0%
TACGCATCATGCTTGTACAG+AGG - chr7_4:21074517-21074536 Msa1144700:intron 45.0%
! TCACACGATGGTCTCTCTTT+TGG - chr7_4:21074731-21074750 Msa1144700:intron 45.0%
TGCTGGTAACTAGTCCGATT+TGG + chr7_4:21075130-21075149 None:intergenic 45.0%
! GTTGGATTCGGTATACATGC+TGG + chr7_4:21075147-21075166 None:intergenic 45.0%
AGCATCTACAAGCTCTCTGT+TGG + chr7_4:21075165-21075184 None:intergenic 45.0%
!! AAGTTTAATTATAAAAATAT+GGG + chr7_4:21073868-21073887 None:intergenic 5.0%
!! TAAGTTTAATTATAAAAATA+TGG + chr7_4:21073869-21073888 None:intergenic 5.0%
!!! ATTTTTATAATTAAACTTAT+AGG - chr7_4:21073870-21073889 Msa1144700:CDS 5.0%
!!! TGTTTTAAATAATAATAAAA+AGG + chr7_4:21074243-21074262 None:intergenic 5.0%
CTGCTGTGTTTGACGTGGAA+GGG + chr7_4:21070152-21070171 None:intergenic 50.0%
TCTGCTGTGTTTGACGTGGA+AGG + chr7_4:21070153-21070172 None:intergenic 50.0%
TGTGTCTGCTGTGTTTGACG+TGG + chr7_4:21070157-21070176 None:intergenic 50.0%
GAAACGGCGCTTCCAACAAA+GGG + chr7_4:21070181-21070200 None:intergenic 50.0%
TGAAACGGCGCTTCCAACAA+AGG + chr7_4:21070182-21070201 None:intergenic 50.0%
CAATACACCCTCTCTCGTTC+AGG - chr7_4:21070309-21070328 Msa1144700:intron 50.0%
! TAGGCTGGACACTTTTACCC+GGG + chr7_4:21070612-21070631 None:intergenic 50.0%
! CTAGGCTGGACACTTTTACC+CGG + chr7_4:21070613-21070632 None:intergenic 50.0%
ACCATCTGTGTTGTCAGGGA+AGG - chr7_4:21070946-21070965 Msa1144700:intron 50.0%
TCCTTCCCTGACAACACAGA+TGG + chr7_4:21070950-21070969 None:intergenic 50.0%
CCCCTCAGCTTATCAATGAG+AGG + chr7_4:21071025-21071044 None:intergenic 50.0%
!! GGGTACCGAGGAACATTCTT+TGG - chr7_4:21071042-21071061 Msa1144700:intron 50.0%
GTGTGAGCAGGTAGTTAGGA+TGG - chr7_4:21071138-21071157 Msa1144700:intron 50.0%
GTTAGTGCTGCAGCCATTTG+TGG - chr7_4:21071196-21071215 Msa1144700:intron 50.0%
TGCAGCCATTTGTGGGAAAC+AGG - chr7_4:21071204-21071223 Msa1144700:intron 50.0%
CGCCGCATGGAATTTATGCA+TGG - chr7_4:21071491-21071510 Msa1144700:intron 50.0%
AGCGGAGCAAGTTAATCAGG+CGG + chr7_4:21071699-21071718 None:intergenic 50.0%
ATCATCCTCCTCGTCTGACA+TGG + chr7_4:21071839-21071858 None:intergenic 50.0%
! CGAGGAGGATGATGATAACG+AGG - chr7_4:21071846-21071865 Msa1144700:CDS 50.0%
GAAGAGACTGGAGAAGAGTG+AGG - chr7_4:21071914-21071933 Msa1144700:CDS 50.0%
GAAAGTGGTCAGTGCATCAG+TGG - chr7_4:21072173-21072192 Msa1144700:intron 50.0%
! TTAGCTCTCGACACTCAAGG+TGG + chr7_4:21072796-21072815 None:intergenic 50.0%
! TGGTTAGCTCTCGACACTCA+AGG + chr7_4:21072799-21072818 None:intergenic 50.0%
AGTTCCTCGAACTGCCTATG+TGG + chr7_4:21072875-21072894 None:intergenic 50.0%
! TTTTCCAGTAGAGCCGGGAT+GGG + chr7_4:21073145-21073164 None:intergenic 50.0%
! CACTGTTTTCCAGTAGAGCC+GGG + chr7_4:21073150-21073169 None:intergenic 50.0%
GGTGTTTGCCAACACAGTTG+AGG - chr7_4:21073344-21073363 Msa1144700:CDS 50.0%
AGTTGAGGCTGTTGAAGCTG+TGG - chr7_4:21073359-21073378 Msa1144700:CDS 50.0%
GAATTGCACGTTGGATGAGC+GGG - chr7_4:21073428-21073447 Msa1144700:CDS 50.0%
TCACTGAGCAAATGGTGCAC+GGG + chr7_4:21073937-21073956 None:intergenic 50.0%
AAACGACAGAGGGTGGTGAA+GGG + chr7_4:21074039-21074058 None:intergenic 50.0%
GATTGACAAACGACAGAGGG+TGG + chr7_4:21074046-21074065 None:intergenic 50.0%
AGGGAAAGGAAATTGGGGAG+TGG - chr7_4:21074486-21074505 Msa1144700:intron 50.0%
ATCATGCTTGTACAGAGGCG+AGG - chr7_4:21074522-21074541 Msa1144700:intron 50.0%
CAGCACGGATGGATGATTGA+GGG - chr7_4:21074550-21074569 Msa1144700:intron 50.0%
AGCACGGATGGATGATTGAG+GGG - chr7_4:21074551-21074570 Msa1144700:intron 50.0%
GATGGATGATTGAGGGGAGA+TGG - chr7_4:21074557-21074576 Msa1144700:intron 50.0%
ATTGAGGGGAGATGGAGTTG+TGG - chr7_4:21074565-21074584 Msa1144700:intron 50.0%
GGAGATGGAGTTGTGGTTGT+GGG - chr7_4:21074572-21074591 Msa1144700:intron 50.0%
AGTTGTGGTTGTGGGAGAGA+TGG - chr7_4:21074580-21074599 Msa1144700:intron 50.0%
GTTGTGGTTGTGGGAGAGAT+GGG - chr7_4:21074581-21074600 Msa1144700:intron 50.0%
ATTGGTCGTACAGCTAGAGC+TGG - chr7_4:21075104-21075123 Msa1144700:CDS 50.0%
ACAGCTAGAGCTGGCCAAAT+CGG - chr7_4:21075113-21075132 Msa1144700:CDS 50.0%
TAGATGCTGTTCGTCGTGCA+GGG - chr7_4:21075177-21075196 Msa1144700:CDS 50.0%
CAGCAGACACAGCCCTTTGT+TGG - chr7_4:21070166-21070185 Msa1144700:CDS 55.0%
!! TGATAAGCTGAGGGGTACCG+AGG - chr7_4:21071030-21071049 Msa1144700:intron 55.0%
AAGCACGAGCAGAACTCTCC+TGG + chr7_4:21071101-21071120 None:intergenic 55.0%
TGGACCAGGGATGGCCAATT+CGG - chr7_4:21071405-21071424 Msa1144700:intron 55.0%
! CGTTGATAGAAGACGCCGCA+TGG - chr7_4:21071478-21071497 Msa1144700:intron 55.0%
TGAAGCCATGTCAGACGAGG+AGG - chr7_4:21071831-21071850 Msa1144700:CDS 55.0%
GCAGCTACACTTCCGGTGAA+TGG - chr7_4:21071973-21071992 Msa1144700:CDS 55.0%
CCACTAACCCACTCAGCATC+AGG + chr7_4:21072036-21072055 None:intergenic 55.0%
!! CCTGATGCTGAGTGGGTTAG+TGG - chr7_4:21072033-21072052 Msa1144700:CDS 55.0%
! GTTTTCCAGTAGAGCCGGGA+TGG + chr7_4:21073146-21073165 None:intergenic 55.0%
! TGTACTGATGCAGCTGCTCG+TGG - chr7_4:21073495-21073514 Msa1144700:CDS 55.0%
TGGGGAAGGAGTTAGTGGAG+AGG + chr7_4:21073995-21074014 None:intergenic 55.0%
AGAGCTGGGGAAGGAGTTAG+TGG + chr7_4:21074000-21074019 None:intergenic 55.0%
TGAAGGGAATGGAGAGGAGG+AGG + chr7_4:21074023-21074042 None:intergenic 55.0%
TGGTGAAGGGAATGGAGAGG+AGG + chr7_4:21074026-21074045 None:intergenic 55.0%
ACAGAGGGTGGTGAAGGGAA+TGG + chr7_4:21074034-21074053 None:intergenic 55.0%
CAAACGACAGAGGGTGGTGA+AGG + chr7_4:21074040-21074059 None:intergenic 55.0%
TTCAGACGGTGAGTGTCCAG+TGG - chr7_4:21074460-21074479 Msa1144700:intron 55.0%
GGTGAGTGTCCAGTGGAGAA+GGG - chr7_4:21074467-21074486 Msa1144700:intron 55.0%
GTGTCCAGTGGAGAAGGGAA+AGG - chr7_4:21074472-21074491 Msa1144700:intron 55.0%
GCAGCACGGATGGATGATTG+AGG - chr7_4:21074549-21074568 Msa1144700:intron 55.0%
GGGAGATGGAGTTGTGGTTG+TGG - chr7_4:21074571-21074590 Msa1144700:intron 55.0%
GTAGATGCTGTTCGTCGTGC+AGG - chr7_4:21075176-21075195 Msa1144700:CDS 55.0%
AGATGCTGTTCGTCGTGCAG+GGG - chr7_4:21075178-21075197 Msa1144700:CDS 55.0%
TGCAGGAGACCGCATTTAGC+AGG - chr7_4:21075416-21075435 Msa1144700:five_prime_UTR 55.0%
ATTGCTGCAGAGACCGGCAG+TGG - chr7_4:21070977-21070996 Msa1144700:intron 60.0%
ACGAGCAGAACTCTCCTGGC+CGG + chr7_4:21071097-21071116 None:intergenic 60.0%
GGACCAGGGATGGCCAATTC+GGG - chr7_4:21071406-21071425 Msa1144700:intron 60.0%
GTTCCCGAATTGGCCATCCC+TGG + chr7_4:21071412-21071431 None:intergenic 60.0%
TGGAGAGGAGGAGGAGAGCT+GGG + chr7_4:21074014-21074033 None:intergenic 60.0%
ATGGAGAGGAGGAGGAGAGC+TGG + chr7_4:21074015-21074034 None:intergenic 60.0%
GGGTGGTGAAGGGAATGGAG+AGG + chr7_4:21074029-21074048 None:intergenic 60.0%
GAGCCGTGAGCGAAAGAAGC+AGG - chr7_4:21074178-21074197 Msa1144700:CDS 60.0%
CGGTGAGTGTCCAGTGGAGA+AGG - chr7_4:21074466-21074485 Msa1144700:intron 60.0%
TGCTTGTACAGAGGCGAGGC+AGG - chr7_4:21074526-21074545 Msa1144700:intron 60.0%
GCTTGTACAGAGGCGAGGCA+GGG - chr7_4:21074527-21074546 Msa1144700:intron 60.0%
GTTCGTCGTGCAGGGGAACT+CGG - chr7_4:21075185-21075204 Msa1144700:CDS 60.0%
AGGGGAACTCGGTCTACCTG+TGG - chr7_4:21075196-21075215 Msa1144700:CDS 60.0%
AAGAAGTCTCTCCGCCGGCC+AGG - chr7_4:21071080-21071099 Msa1144700:intron 65.0%
AGCAGAACTCTCCTGGCCGG+CGG + chr7_4:21071094-21071113 None:intergenic 65.0%
CCAGTAGAGCCGGGATGGGT+TGG + chr7_4:21073141-21073160 None:intergenic 65.0%
CCAACCCATCCCGGCTCTAC+TGG - chr7_4:21073138-21073157 Msa1144700:intron 65.0%
TGATGCAGCTGCTCGTGGCG+TGG - chr7_4:21073500-21073519 Msa1144700:CDS 65.0%
AGGAGGAGGAGAGCTGGGGA+AGG + chr7_4:21074009-21074028 None:intergenic 65.0%
GGAGAGGAGGAGGAGAGCTG+GGG + chr7_4:21074013-21074032 None:intergenic 65.0%
AGAGGCGAGGCAGGGCAGCA+CGG - chr7_4:21074535-21074554 Msa1144700:intron 70.0%
GCGAGGCAGGGCAGCACGGA+TGG - chr7_4:21074539-21074558 Msa1144700:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 21069891 21075483 21069891 ID=Msa1144700;Name=Msa1144700
chr7_4 mRNA 21069891 21075483 21069891 ID=Msa1144700-mRNA-1;Parent=Msa1144700;Name=Msa1144700-mRNA-1;_AED=0.13;_eAED=0.13;_QI=89|1|0.85|1|1|1|7|0|579
chr7_4 exon 21069891 21069953 21069891 ID=Msa1144700-mRNA-1:exon:5059;Parent=Msa1144700-mRNA-1
chr7_4 exon 21070157 21070309 21070157 ID=Msa1144700-mRNA-1:exon:5058;Parent=Msa1144700-mRNA-1
chr7_4 exon 21071823 21072150 21071823 ID=Msa1144700-mRNA-1:exon:5057;Parent=Msa1144700-mRNA-1
chr7_4 exon 21073292 21073731 21073292 ID=Msa1144700-mRNA-1:exon:5056;Parent=Msa1144700-mRNA-1
chr7_4 exon 21073848 21073961 21073848 ID=Msa1144700-mRNA-1:exon:5055;Parent=Msa1144700-mRNA-1
chr7_4 exon 21074149 21074439 21074149 ID=Msa1144700-mRNA-1:exon:5054;Parent=Msa1144700-mRNA-1
chr7_4 exon 21075044 21075483 21075044 ID=Msa1144700-mRNA-1:exon:5053;Parent=Msa1144700-mRNA-1
chr7_4 five_prime_UTR 21075395 21075483 21075395 ID=Msa1144700-mRNA-1:five_prime_utr;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21075044 21075394 21075044 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21074149 21074439 21074149 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21073848 21073961 21073848 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21073292 21073731 21073292 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21071823 21072150 21071823 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21070157 21070309 21070157 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
chr7_4 CDS 21069891 21069953 21069891 ID=Msa1144700-mRNA-1:cds;Parent=Msa1144700-mRNA-1
Gene Sequence

>Msa1144700

ATGAATGTTACTCGTTCTGCTCTGAAACTCCATTTTCAAAATTCACCGATTCGCTACCATCAATTTCTCTTCTTCTCTCGATTCAACAATGCTCTTATTCGCAATCCCACTTTATCTTCGTCTTCGTCTTCTCTTTTCAATTTCAATGCAACGCGTTTCTTTTCTCTAACCCTTCCACGTCAAACACAGCAGACACAGCCCTTTGTTGGAAGCGCCGTTTCATCAGAAGATTACAATGGAAGAGACACTTTCTTTGCTGAAGATAACGTTTCGTGGAGTTCAATTGGTCTTTCTCATACCCTTTCTCGAGCTCTCTCTAATATTGCTCTCAATACACCCTCTCTCGTTCAGGCTTCTTCTATACCATCTGTGTTGTCAGGGAAGGATGTAGTTATTGCTGCAGAGACCGGCAGTGGTAAGACATACAGTTATCTACTTCCTCTCATTGATAAGCTGAGGGGTACCGAGGAACATTCTTTGGATGTTGTATCTGATAAAGAAGTCTCTCCGCCGGCCAGGAGAGTTCTGCTCGTGCTTTGTCCGAATGTGCAATTGTGTGAGCAGGTAGTTAGGATGGCTAATAGTCTCTGTGGAGACAATGATGAAACCATTGTTAGTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCGGGAACCTGATATCATTGTGACAACACCTGCTGCTCTTCTCAATCATGTTGACGTTGATAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAAGTAATCCGCCTGATTAACTTGCTCCGCTATGATGAAAAACTCTTGTCTCGATCGAAAACATCAGTATCAGAGTTGCCAGTGACATCGGAATCTTCTTTGTTGTCGCATGATGCTTCAGAAGGTGAAGAGGAATTTCCAATTGAAGCCATGTCAGACGAGGAGGATGATGATAACGAGGATATTGCCAATATTAATAACGAAGCTGAATCTGTCAAGAAAACAAGAAGAGACTGGAGAAGAGTGAGGAGATATTTTGAGCGAAGTAAACAATATGTTTTTGTTGCAGCTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCATTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATTGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAGCTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACAGTTGAGGCTGTTGAAGCTGTGGTGAAGATATTGGGCTATGCTGGGCTTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACTTTAGTTGATTTCTACGACAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGCGTGGATATTCCAAATGTCTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGTCGTACAGCTAGAGCTGGCCAAATCGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCTGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAGACCGCATTTAGCAGGAAAAGAAGCTTCCGTAACAAGATAAAAAAGAAAGGTAAAGTTTAA
Protein sequence

>Msa1144700

MNVTRSALKLHFQNSPIRYHQFLFFSRFNNALIRNPTLSSSSSSLFNFNATRFFSLTLPRQTQQTQPFVGSAVSSEDYNGRDTFFAEDNVSWSSIGLSHTLSRALSNIALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEHSLDVVSDKEVSPPARRVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICGKQGWPIREPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSELPVTSESSLLSHDASEGEEEFPIEAMSDEEDDDNEDIANINNEAESVKKTRRDWRRVRRYFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHCHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYDKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRSFRNKIKKKGKV*