AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0473870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0473870 MtrunA17_Chr3g0130121 97.588 539 9 1 6 544 3 537 0.0 1081
Msa0473870 MtrunA17_Chr4g0030381 35.644 404 239 7 136 534 92 479 5.79e-81 261
Msa0473870 MtrunA17_Chr8g0387311 29.281 584 311 13 26 534 18 574 2.13e-79 260
Msa0473870 MtrunA17_Chr8g0373811 30.864 405 252 6 138 534 137 521 3.45e-69 232
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0473870 AT2G13690.1 54.797 542 211 8 12 538 18 540 0.0 564
Msa0473870 AT5G60050.1 33.255 424 258 9 117 534 79 483 1.24e-78 256
Msa0473870 AT1G63850.1 32.432 407 250 4 138 537 142 530 1.15e-72 241
Msa0473870 AT3G50780.1 33.166 398 242 5 138 534 126 500 2.24e-64 219
Msa0473870 AT3G50780.2 33.166 398 242 5 138 534 126 500 2.24e-64 219

Find 187 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAGGCGATTTAATTTA+TGG 0.119562 3_3:+76595634 None:intergenic
ATGATCTACGCCACCAAATT+TGG 0.161834 3_3:+76593429 None:intergenic
TAAGCAAAGCATTCCAAATT+TGG 0.169661 3_3:-76593442 Msa0473870:CDS
GGTTTGATGGGTGGGTTATC+TGG 0.170879 3_3:+76595406 None:intergenic
AAAGTGTGTTGTTGCTTTAA+AGG 0.172834 3_3:+76593518 None:intergenic
GAAAGTGGTGGGCTTGGATA+TGG 0.206424 3_3:+76595357 None:intergenic
TATGGGGAAGAGTGTGGTTT+TGG 0.233151 3_3:+76595652 None:intergenic
AGTTAGTTAGAGAGAGAAAA+TGG 0.235982 3_3:-76595512 Msa0473870:exon
TTCAATAATCAATACCATTT+AGG 0.253682 3_3:+76593203 None:intergenic
ACATTCGGCTGGGAATCTTC+TGG 0.254028 3_3:+76594136 None:intergenic
TTGGAGCTTTGAGGGGAGTT+TGG 0.259791 3_3:+76595322 None:intergenic
GGTTCCTGAAGTTGATAATT+TGG 0.260783 3_3:-76594915 Msa0473870:CDS
CTTGGATATGGGTTCGGACT+TGG 0.266293 3_3:+76595369 None:intergenic
CGGACTTGGGATTGGGCTTA+CGG 0.272463 3_3:+76595383 None:intergenic
CAGAAAAGGGCTTGATATAA+AGG 0.277618 3_3:-76593579 Msa0473870:CDS
AGCAATGCGGGTGCTGGATT+TGG 0.283745 3_3:+76595303 None:intergenic
TTCATCGGCGGCGGTGGAAT+TGG 0.302520 3_3:+76595139 None:intergenic
TTGGCAGGTTAATTCCTAAA+TGG 0.306856 3_3:-76593217 Msa0473870:three_prime_UTR
AATCCAATCACAAACGAAAA+TGG 0.308512 3_3:-76595775 Msa0473870:five_prime_UTR
GGACTTGGGATTGGGCTTAC+GGG 0.315616 3_3:+76595384 None:intergenic
CCGTGTAAAGATTTGCAATT+AGG 0.321222 3_3:-76593296 Msa0473870:three_prime_UTR
TATTGATACTGTCAGAATCT+TGG 0.325615 3_3:+76593347 None:intergenic
GCAACAACACACTTTGTTCA+TGG 0.330171 3_3:-76593510 Msa0473870:CDS
GGCTTACGGGGTTTGATGGG+TGG 0.331446 3_3:+76595397 None:intergenic
ATTGGGCTTACGGGGTTTGA+TGG 0.341366 3_3:+76595393 None:intergenic
AAAGTGATTGTTGTTGGAAT+TGG 0.342280 3_3:+76595616 None:intergenic
GGAGGAGAAAGTGGTGGGCT+TGG 0.344326 3_3:+76595351 None:intergenic
CTCTCTGATCAGCCTCTTTG+AGG 0.349492 3_3:-76593948 Msa0473870:CDS
ATGGGTTCGGACTTGGGATT+GGG 0.351329 3_3:+76595376 None:intergenic
TTTGTAAAAGTGATTGTTGT+TGG 0.356174 3_3:+76595610 None:intergenic
GAGTTGAAATCACTAGTTAA+AGG 0.356295 3_3:-76594058 Msa0473870:CDS
CCTGCCAATACAACACTCTA+TGG 0.360064 3_3:+76593232 None:intergenic
GGTGGGTTATCTGGGCTTGA+AGG 0.362443 3_3:+76595415 None:intergenic
GTGCTGGATTTGGAGCTTTG+AGG 0.362532 3_3:+76595313 None:intergenic
TATGGGTTCGGACTTGGGAT+TGG 0.363847 3_3:+76595375 None:intergenic
TGCTGGATTTGGAGCTTTGA+GGG 0.364906 3_3:+76595314 None:intergenic
GGTGGAATTGGAGCGGTAAT+AGG 0.371998 3_3:+76595151 None:intergenic
CATTCGGCTGGGAATCTTCT+GGG 0.375478 3_3:+76594137 None:intergenic
AACGGCGGCAGAGTCTTCTA+TGG 0.375524 3_3:+76595237 None:intergenic
CTAACTAACTAACTAACTAA+TGG 0.376563 3_3:+76595525 None:intergenic
GCTTGCTTAAGCTTTGGCTT+TGG 0.376721 3_3:+76595724 None:intergenic
CTATGTTGTTAGACTTTGGC+TGG 0.378576 3_3:-76593613 Msa0473870:CDS
TTGGAGGCGATTTAATTTAT+GGG 0.383990 3_3:+76595635 None:intergenic
TACTCTTTACCTTGATTCAA+TGG 0.384352 3_3:+76593382 None:intergenic
GCTTTGAGGGGAGTTTGGTA+TGG 0.385704 3_3:+76595327 None:intergenic
TGGCTGCAGAGATGCAGAAA+AGG 0.389977 3_3:-76593593 Msa0473870:CDS
GTTCCTGAAGTTGATAATTT+GGG 0.394094 3_3:-76594914 Msa0473870:CDS
ATTGATACTGTCAGAATCTT+GGG 0.394689 3_3:+76593348 None:intergenic
AGCGGTTCTGTTTGTTGCCA+TGG 0.400271 3_3:-76593699 Msa0473870:CDS
ACACCCAAATTATCAACTTC+AGG 0.405729 3_3:+76594911 None:intergenic
GTTTGATGGGTGGGTTATCT+GGG 0.407957 3_3:+76595407 None:intergenic
GCTAAAAGACTTCTCAATAT+CGG 0.408077 3_3:-76594848 Msa0473870:CDS
CCCTCGCCGGATCTTATCTC+CGG 0.408941 3_3:-76595272 Msa0473870:CDS
TCTATGGGAGAGACTCTTCC+CGG 0.409081 3_3:+76595253 None:intergenic
TTGGATATGGGTTCGGACTT+GGG 0.414993 3_3:+76595370 None:intergenic
TGGAATGCTTTGCTTAGATT+AGG 0.420028 3_3:+76593449 None:intergenic
CAAGGTAAAGAGTATCTGTT+AGG 0.421464 3_3:-76593373 Msa0473870:exon
TTGAGGGGAGTTTGGTATGG+AGG 0.423913 3_3:+76595330 None:intergenic
GATCCGAGCAATGCGGGTGC+TGG 0.424705 3_3:+76595297 None:intergenic
TCACCTATGTTGTTAGACTT+TGG 0.425477 3_3:-76593617 Msa0473870:CDS
TTGTGTCACTAGGTGTCTGC+AGG 0.433374 3_3:-76594316 Msa0473870:intron
GAAACTACGAGGGACATTCT+AGG 0.434329 3_3:-76594178 Msa0473870:CDS
TTTCAACTCATTTCTTGCAT+TGG 0.435190 3_3:+76594072 None:intergenic
TCTTCTTCCTCTTCTGTCCA+AGG 0.435939 3_3:+76594241 None:intergenic
TGCCGGTTGGAAGCTAGATC+AGG 0.436649 3_3:-76593659 Msa0473870:CDS
ACCGGAGAGGGGTTGTGATC+GGG 0.440559 3_3:+76595214 None:intergenic
AGCCTCAAGGTATTGTAAAC+AGG 0.444041 3_3:+76594267 None:intergenic
GCGGAGTTCATCGGCGGCGG+TGG 0.444320 3_3:+76595133 None:intergenic
CTTGAGATGTGTTCAATCAT+CGG 0.448853 3_3:+76593872 None:intergenic
AATACCTTGAGGCTGTTCCT+TGG 0.452602 3_3:-76594258 Msa0473870:CDS
AAAGTGGTGGGCTTGGATAT+GGG 0.452627 3_3:+76595358 None:intergenic
TTGTTGGAAATCATGCTTGA+TGG 0.457343 3_3:-76593827 Msa0473870:CDS
AATAGAGATCGTCTTTGCTT+AGG 0.458824 3_3:+76593993 None:intergenic
CGAAAGAGCAACACCATGTT+CGG 0.462705 3_3:+76595446 None:intergenic
CCATAGAGTGTTGTATTGGC+AGG 0.464323 3_3:-76593232 Msa0473870:three_prime_UTR
TGGTATGGAGGAGGAGAAAG+TGG 0.466478 3_3:+76595342 None:intergenic
TGATAACATCAACTGGTTGT+TGG 0.467994 3_3:-76593843 Msa0473870:CDS
GACAGGTTGATAACATCAAC+TGG 0.468787 3_3:-76593850 Msa0473870:CDS
AGGGGAGTTTGGTATGGAGG+AGG 0.468937 3_3:+76595333 None:intergenic
GTTAATTGCGGATTATAGAA+AGG 0.469473 3_3:-76594987 Msa0473870:CDS
ATCTCCATAGAGTGTTGTAT+TGG 0.475427 3_3:-76593236 Msa0473870:three_prime_UTR
TGTCAACCTTTCAGGATTGA+CGG 0.479755 3_3:+76593913 None:intergenic
AGTAACCTCTAAAACATCAA+TGG 0.487626 3_3:+76594814 None:intergenic
AACACACTTTGTTCATGGAA+TGG 0.488024 3_3:-76593505 Msa0473870:CDS
CGTCTTTGCTTAGGTCAAGA+TGG 0.489915 3_3:+76594002 None:intergenic
GTGATTGTTGTTGGAATTGG+AGG 0.491769 3_3:+76595619 None:intergenic
AACCGGAGAGGGGTTGTGAT+CGG 0.492279 3_3:+76595213 None:intergenic
GCTTACGGGGTTTGATGGGT+GGG 0.492706 3_3:+76595398 None:intergenic
TTAATTGCGGATTATAGAAA+GGG 0.494426 3_3:-76594986 Msa0473870:CDS
AGAGGGGTTGTGATCGGGAA+CGG 0.494719 3_3:+76595219 None:intergenic
GGTGGGCTTGGATATGGGTT+CGG 0.495015 3_3:+76595363 None:intergenic
GGGTTATCTGGGCTTGAAGG+TGG 0.495636 3_3:+76595418 None:intergenic
GGCTGCAGAGATGCAGAAAA+GGG 0.496864 3_3:-76593592 Msa0473870:CDS
ATGAGTTTGAGAGGGAAGAA+CGG 0.499789 3_3:-76595073 Msa0473870:CDS
AGGTCTTCTTTGTAAAAGCT+CGG 0.499952 3_3:-76594038 Msa0473870:CDS
GACGGAGGTGAATTGAGAAC+CGG 0.499970 3_3:+76595196 None:intergenic
TTGGGCTTACGGGGTTTGAT+GGG 0.505700 3_3:+76595394 None:intergenic
CTGAGTTCATATCTAACCAT+AGG 0.505938 3_3:+76593731 None:intergenic
AAACTTATGCCATTGAATCA+AGG 0.507955 3_3:-76593391 Msa0473870:CDS
AATCCAGCACCCGCATTGCT+CGG 0.508267 3_3:-76595300 Msa0473870:CDS
CCACGAGAAAATTGCAATGC+CGG 0.516914 3_3:-76593676 Msa0473870:CDS
AGGGTCGATCCGAGCAATGC+GGG 0.519510 3_3:+76595291 None:intergenic
AATTCTTCGAGTGGTGGTGG+TGG 0.524260 3_3:-76594962 Msa0473870:CDS
CTCTTCCCGGAGATAAGATC+CGG 0.524725 3_3:+76595266 None:intergenic
TCCCGATCACAACCCCTCTC+CGG 0.526835 3_3:-76595215 Msa0473870:CDS
GCACAATAATGCATCCCCTA+TGG 0.529126 3_3:-76593747 Msa0473870:CDS
GCTGGATTTGGAGCTTTGAG+GGG 0.529230 3_3:+76595315 None:intergenic
TCTTCGAGTGGTGGTGGTGG+TGG 0.529349 3_3:-76594959 Msa0473870:CDS
GAGAAAATTGCAATGCCGGT+TGG 0.529896 3_3:-76593672 Msa0473870:CDS
ACTCCGACGGCGGAGTTCAT+CGG 0.533515 3_3:+76595124 None:intergenic
TATTGATTATTGAATTCTCT+AGG 0.535778 3_3:-76593194 Msa0473870:three_prime_UTR
GATGTCGAGTTACATTCGGC+TGG 0.536456 3_3:+76594125 None:intergenic
GGTAATTCTTCGAGTGGTGG+TGG 0.537316 3_3:-76594965 Msa0473870:CDS
AATGGTTTCACCACTTCTCA+AGG 0.538484 3_3:-76593487 Msa0473870:CDS
ACGGCGGAGTTCATCGGCGG+CGG 0.541307 3_3:+76595130 None:intergenic
ACATAGGTGAAAACCATGCT+TGG 0.541457 3_3:+76593630 None:intergenic
GTCGGAGTCAGTGTCGGAGA+TGG 0.542344 3_3:-76595109 Msa0473870:CDS
TAACAAAATGTGTAGAATTG+AGG 0.544815 3_3:-76594936 Msa0473870:CDS
AAAGATTTGCAATTAGGTGA+GGG 0.552544 3_3:-76593290 Msa0473870:three_prime_UTR
GCCCTGATCTAGCTTCCAAC+CGG 0.552789 3_3:+76593657 None:intergenic
GGTGAATTGAGAACCGGAGA+GGG 0.552875 3_3:+76595202 None:intergenic
ATGGAGGAGGAGAAAGTGGT+GGG 0.554708 3_3:+76595346 None:intergenic
TGAGTTCATATCTAACCATA+GGG 0.555019 3_3:+76593732 None:intergenic
AACTAACTAACTAATGGATG+TGG 0.555256 3_3:+76595531 None:intergenic
CACATGCACATGATGGTGTA+AGG 0.556207 3_3:+76595571 None:intergenic
ATGTGAGGATGAGTTTGAGA+GGG 0.556266 3_3:-76595081 Msa0473870:CDS
ACGAGATGTCGAGTTACATT+CGG 0.559548 3_3:+76594121 None:intergenic
TTAATTTATGGGGAAGAGTG+TGG 0.559887 3_3:+76595646 None:intergenic
GGCTGTTCCTTGGACAGAAG+AGG 0.566418 3_3:-76594248 Msa0473870:CDS
CCTCGCCGGATCTTATCTCC+GGG 0.568057 3_3:-76595271 Msa0473870:CDS
GCAGGCATTATGTTCACAAA+GGG 0.570442 3_3:-76594298 Msa0473870:CDS
CCTAATTGCAAATCTTTACA+CGG 0.572250 3_3:+76593296 None:intergenic
TAAAGATTTGCAATTAGGTG+AGG 0.577448 3_3:-76593291 Msa0473870:three_prime_UTR
GATCAGGGCTTCTCCAAGCA+TGG 0.578787 3_3:-76593643 Msa0473870:CDS
GATTGAACACATCTCAAGAC+AGG 0.580199 3_3:-76593867 Msa0473870:CDS
GACTTGGGATTGGGCTTACG+GGG 0.582080 3_3:+76595385 None:intergenic
CCTTTCAGGATTGACGGTGT+CGG 0.585675 3_3:+76593919 None:intergenic
GCAAAGCATTCCAAATTTGG+TGG 0.586003 3_3:-76593439 Msa0473870:CDS
CAGCCAAAGTCTAACAACAT+AGG 0.586068 3_3:+76593614 None:intergenic
TTTCACCACTTCTCAAGGCA+TGG 0.586801 3_3:-76593482 Msa0473870:CDS
GATGTGAGGATGAGTTTGAG+AGG 0.587039 3_3:-76595082 Msa0473870:CDS
TGGAGGCGATTTAATTTATG+GGG 0.587171 3_3:+76595636 None:intergenic
AGCAACACCATGTTCGGTGT+CGG 0.587244 3_3:+76595452 None:intergenic
AAGATTTGCAATTAGGTGAG+GGG 0.590623 3_3:-76593289 Msa0473870:three_prime_UTR
CCGCCGATGAACTCCGCCGT+CGG 0.590734 3_3:-76595127 Msa0473870:CDS
ACGGCGGCAGAGTCTTCTAT+GGG 0.600004 3_3:+76595238 None:intergenic
GTCCTGTTTACAATACCTTG+AGG 0.601459 3_3:-76594269 Msa0473870:CDS
CGGAAGCTACGAGATCTTGA+CGG 0.605422 3_3:+76595178 None:intergenic
ATGTCGAGTTACATTCGGCT+GGG 0.606626 3_3:+76594126 None:intergenic
TCTGATCAGCCTCTTTGAGG+AGG 0.606748 3_3:-76593945 Msa0473870:CDS
ATCGACGCCGACACCGAACA+TGG 0.608753 3_3:-76595459 Msa0473870:CDS
TCCGACACTGACTCCGACGG+CGG 0.610110 3_3:+76595114 None:intergenic
TTGCTCGGATCGACCCTCGC+CGG 0.610784 3_3:-76595285 Msa0473870:CDS
CAGTGCCATGCCTTGAGAAG+TGG 0.610868 3_3:+76593477 None:intergenic
GCCGGTTGGAAGCTAGATCA+GGG 0.611000 3_3:-76593658 Msa0473870:CDS
AGAAAGGGTAATTCTTCGAG+TGG 0.615946 3_3:-76594971 Msa0473870:CDS
AGTTTGAGAGGGAAGAACGG+TGG 0.617140 3_3:-76595070 Msa0473870:CDS
TGCAGGCATTATGTTCACAA+AGG 0.618116 3_3:-76594299 Msa0473870:CDS
GGGGTTGTGATCGGGAACGG+CGG 0.618841 3_3:+76595222 None:intergenic
TCCGCCGTCGGAGTCAGTGT+CGG 0.619090 3_3:-76595115 Msa0473870:CDS
CTGTCCAAGGAACAGCCTCA+AGG 0.619180 3_3:+76594254 None:intergenic
TGCATTGGCATTGACACATG+TGG 0.622601 3_3:+76594087 None:intergenic
AAGGGTAATTCTTCGAGTGG+TGG 0.623485 3_3:-76594968 Msa0473870:CDS
CCGACACCGTCAATCCTGAA+AGG 0.628550 3_3:-76593919 Msa0473870:CDS
TATGGAGGAGGAGAAAGTGG+TGG 0.632558 3_3:+76595345 None:intergenic
CCCGGAGATAAGATCCGGCG+AGG 0.636909 3_3:+76595271 None:intergenic
TGGGTTGGGTGAAGAAAACG+AGG 0.637664 3_3:+76595672 None:intergenic
TGAACTCAGTAGAGTTTCAG+CGG 0.639941 3_3:-76593717 Msa0473870:CDS
CTACGAGGGACATTCTAGGA+AGG 0.640215 3_3:-76594174 Msa0473870:CDS
TTGGAGCGGTAATAGGTGCA+CGG 0.641085 3_3:+76595158 None:intergenic
TGTCGGATGCCTCCTCAAAG+AGG 0.642194 3_3:+76593936 None:intergenic
ACTGCTGCACATGCACATGA+TGG 0.650779 3_3:+76595564 None:intergenic
CCGGAGATAAGATCCGGCGA+GGG 0.655444 3_3:+76595272 None:intergenic
CGGCGGCGGTGGAATTGGAG+CGG 0.663825 3_3:+76595144 None:intergenic
TCGGAGATGGATTTGATGTG+AGG 0.666434 3_3:-76595096 Msa0473870:CDS
GAGGGTCGATCCGAGCAATG+CGG 0.667976 3_3:+76595290 None:intergenic
ATGCACATGATGGTGTAAGG+AGG 0.668126 3_3:+76595574 None:intergenic
GTGAATTGAGAACCGGAGAG+GGG 0.669951 3_3:+76595203 None:intergenic
AGGTGAATTGAGAACCGGAG+AGG 0.673408 3_3:+76595201 None:intergenic
GTTTGATGATGAAACTACGA+GGG 0.673909 3_3:-76594188 Msa0473870:CDS
ATCTCCGACACTGACTCCGA+CGG 0.680633 3_3:+76595111 None:intergenic
GCTTGATGGACAAATAGCAG+AGG 0.691301 3_3:-76593813 Msa0473870:CDS
TCAGAGAGTCAATACACGAG+TGG 0.703997 3_3:+76593963 None:intergenic
CCGACGGCGGAGTTCATCGG+CGG 0.705502 3_3:+76595127 None:intergenic
GAGTTCATATCTAACCATAG+GGG 0.716962 3_3:+76593733 None:intergenic
AAGCTACGAGATCTTGACGG+AGG 0.741868 3_3:+76595181 None:intergenic
AGTTTGATGATGAAACTACG+AGG 0.766574 3_3:-76594189 Msa0473870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATGATTTAAGAAAA+TGG + chr3_3:76594135-76594154 None:intergenic 10.0%
!!! TTAATTTAATAGTATTTTGT+AGG - chr3_3:76594344-76594363 Msa0473870:intron 10.0%
!!! TTCGTTTATTTTATTGTTTT+GGG - chr3_3:76595758-76595777 Msa0473870:five_prime_UTR 15.0%
!! TTATGATTTAAGAAAATGGA+AGG + chr3_3:76594131-76594150 None:intergenic 20.0%
!! AAATTGATGCATTAATATCT+AGG + chr3_3:76594184-76594203 None:intergenic 20.0%
!! TTTACTTTATATGCAATAGT+AGG - chr3_3:76594270-76594289 Msa0473870:CDS 20.0%
!! TTACTTTATATGCAATAGTA+GGG - chr3_3:76594271-76594290 Msa0473870:CDS 20.0%
!!! ATTTTAATCAGTTTGAAGAT+TGG - chr3_3:76594398-76594417 Msa0473870:intron 20.0%
!!! CAATTGTTTTTTCTTACATA+TGG - chr3_3:76594565-76594584 Msa0473870:intron 20.0%
!! TTCAATAATCAATACCATTT+AGG + chr3_3:76595714-76595733 None:intergenic 20.0%
!!! TATTGATTATTGAATTCTCT+AGG - chr3_3:76595720-76595739 Msa0473870:five_prime_UTR 20.0%
!!! CTTCGTTTATTTTATTGTTT+TGG - chr3_3:76595757-76595776 Msa0473870:five_prime_UTR 20.0%
! TTTGTAAAAGTGATTGTTGT+TGG + chr3_3:76593307-76593326 None:intergenic 25.0%
! CTAACTAACTAACTAACTAA+TGG + chr3_3:76593392-76593411 None:intergenic 25.0%
!! TTAATTGCGGATTATAGAAA+GGG - chr3_3:76593928-76593947 Msa0473870:CDS 25.0%
! TAACAAAATGTGTAGAATTG+AGG - chr3_3:76593978-76593997 Msa0473870:CDS 25.0%
! TGCATTAATATCTAGGTTAA+AGG + chr3_3:76594177-76594196 None:intergenic 25.0%
!! GTGATTAGTCAAGATTATTA+TGG - chr3_3:76594231-76594250 Msa0473870:CDS 25.0%
!! AATTAATGCATTGACAAACA+AGG + chr3_3:76594330-76594349 None:intergenic 25.0%
! AAGATTGGCATGAAATTAAA+TGG - chr3_3:76594413-76594432 Msa0473870:intron 25.0%
! AGATTGGCATGAAATTAAAT+GGG - chr3_3:76594414-76594433 Msa0473870:intron 25.0%
!! GGAAATTTTTATTACCTTGA+AGG - chr3_3:76594435-76594454 Msa0473870:intron 25.0%
!!! ATAGTTGATAATGTTTTTGC+TGG - chr3_3:76594540-76594559 Msa0473870:intron 25.0%
!!! TATTGTGCATTTTAAGAAGT+TGG + chr3_3:76595155-76595174 None:intergenic 25.0%
AATCCAATCACAAACGAAAA+TGG - chr3_3:76593139-76593158 Msa0473870:three_prime_UTR 30.0%
! TTGGAGGCGATTTAATTTAT+GGG + chr3_3:76593282-76593301 None:intergenic 30.0%
! ATTGGAGGCGATTTAATTTA+TGG + chr3_3:76593283-76593302 None:intergenic 30.0%
! AAAGTGATTGTTGTTGGAAT+TGG + chr3_3:76593301-76593320 None:intergenic 30.0%
! AACTAACTAACTAATGGATG+TGG + chr3_3:76593386-76593405 None:intergenic 30.0%
AGTTAGTTAGAGAGAGAAAA+TGG - chr3_3:76593402-76593421 Msa0473870:CDS 30.0%
! AGCAATTTTATGCGCTAATT+CGG - chr3_3:76593891-76593910 Msa0473870:CDS 30.0%
! GTTAATTGCGGATTATAGAA+AGG - chr3_3:76593927-76593946 Msa0473870:CDS 30.0%
!! GTTCCTGAAGTTGATAATTT+GGG - chr3_3:76594000-76594019 Msa0473870:CDS 30.0%
GCTAAAAGACTTCTCAATAT+CGG - chr3_3:76594066-76594085 Msa0473870:CDS 30.0%
!! TAGATCCATTGATGTTTTAG+AGG - chr3_3:76594095-76594114 Msa0473870:CDS 30.0%
!! AGTAACCTCTAAAACATCAA+TGG + chr3_3:76594103-76594122 None:intergenic 30.0%
TAATATCTAGGTTAAAGGCA+AGG + chr3_3:76594172-76594191 None:intergenic 30.0%
TTATTACCTTGAAGGAAGTA+TGG - chr3_3:76594443-76594462 Msa0473870:intron 30.0%
TTTCAACTCATTTCTTGCAT+TGG + chr3_3:76594845-76594864 None:intergenic 30.0%
GAGTTGAAATCACTAGTTAA+AGG - chr3_3:76594856-76594875 Msa0473870:CDS 30.0%
!!! TCTTTTTTTGTCAACCTTTC+AGG + chr3_3:76595012-76595031 None:intergenic 30.0%
TGAGTTCATATCTAACCATA+GGG + chr3_3:76595185-76595204 None:intergenic 30.0%
! TGATATAAAGGTTTTGCAAG+AGG - chr3_3:76595347-76595366 Msa0473870:CDS 30.0%
!! AAAGTGTGTTGTTGCTTTAA+AGG + chr3_3:76595399-76595418 None:intergenic 30.0%
! TAAGCAAAGCATTCCAAATT+TGG - chr3_3:76595472-76595491 Msa0473870:CDS 30.0%
AAACTTATGCCATTGAATCA+AGG - chr3_3:76595523-76595542 Msa0473870:five_prime_UTR 30.0%
TACTCTTTACCTTGATTCAA+TGG + chr3_3:76595535-76595554 None:intergenic 30.0%
ATTGATACTGTCAGAATCTT+GGG + chr3_3:76595569-76595588 None:intergenic 30.0%
TATTGATACTGTCAGAATCT+TGG + chr3_3:76595570-76595589 None:intergenic 30.0%
CCTAATTGCAAATCTTTACA+CGG + chr3_3:76595621-76595640 None:intergenic 30.0%
TAAAGATTTGCAATTAGGTG+AGG - chr3_3:76595623-76595642 Msa0473870:five_prime_UTR 30.0%
AAAGATTTGCAATTAGGTGA+GGG - chr3_3:76595624-76595643 Msa0473870:five_prime_UTR 30.0%
!!! TTGCCATTTTCGTTTGTGAT+TGG + chr3_3:76593145-76593164 None:intergenic 35.0%
! TTTTCTGCTTGCTTAAGCTT+TGG + chr3_3:76593199-76593218 None:intergenic 35.0%
TTAATTTATGGGGAAGAGTG+TGG + chr3_3:76593271-76593290 None:intergenic 35.0%
! TGGAGGCGATTTAATTTATG+GGG + chr3_3:76593281-76593300 None:intergenic 35.0%
! AATTTTATGCGCTAATTCGG+AGG - chr3_3:76593894-76593913 Msa0473870:CDS 35.0%
!! GGTTCCTGAAGTTGATAATT+TGG - chr3_3:76593999-76594018 Msa0473870:CDS 35.0%
ACACCCAAATTATCAACTTC+AGG + chr3_3:76594006-76594025 None:intergenic 35.0%
!!! TTGTCTGTTTTTGTGTCACT+AGG - chr3_3:76594588-76594607 Msa0473870:intron 35.0%
!! AGTTTGATGATGAAACTACG+AGG - chr3_3:76594725-76594744 Msa0473870:intron 35.0%
!! GTTTGATGATGAAACTACGA+GGG - chr3_3:76594726-76594745 Msa0473870:intron 35.0%
AGGTCTTCTTTGTAAAAGCT+CGG - chr3_3:76594876-76594895 Msa0473870:CDS 35.0%
AATAGAGATCGTCTTTGCTT+AGG + chr3_3:76594924-76594943 None:intergenic 35.0%
CTTGAGATGTGTTCAATCAT+CGG + chr3_3:76595045-76595064 None:intergenic 35.0%
TGATAACATCAACTGGTTGT+TGG - chr3_3:76595071-76595090 Msa0473870:CDS 35.0%
TTGTTGGAAATCATGCTTGA+TGG - chr3_3:76595087-76595106 Msa0473870:CDS 35.0%
! ACAAATAGCAGAGGATTTTG+TGG - chr3_3:76595110-76595129 Msa0473870:CDS 35.0%
! CAGAGGATTTTGTGGATATA+TGG - chr3_3:76595118-76595137 Msa0473870:CDS 35.0%
GAGTTCATATCTAACCATAG+GGG + chr3_3:76595184-76595203 None:intergenic 35.0%
CTGAGTTCATATCTAACCAT+AGG + chr3_3:76595186-76595205 None:intergenic 35.0%
TCACCTATGTTGTTAGACTT+TGG - chr3_3:76595297-76595316 Msa0473870:CDS 35.0%
CAGAAAAGGGCTTGATATAA+AGG - chr3_3:76595335-76595354 Msa0473870:CDS 35.0%
AACACACTTTGTTCATGGAA+TGG - chr3_3:76595409-76595428 Msa0473870:CDS 35.0%
TGGAATGCTTTGCTTAGATT+AGG + chr3_3:76595468-76595487 None:intergenic 35.0%
!! TGGCGTAGATCATTTTTAAG+AGG - chr3_3:76595495-76595514 Msa0473870:CDS 35.0%
!! CAAGGTAAAGAGTATCTGTT+AGG - chr3_3:76595541-76595560 Msa0473870:five_prime_UTR 35.0%
CGGTACACAAAAAGTTAAAG+TGG + chr3_3:76595601-76595620 None:intergenic 35.0%
CCGTGTAAAGATTTGCAATT+AGG - chr3_3:76595618-76595637 Msa0473870:five_prime_UTR 35.0%
AAGATTTGCAATTAGGTGAG+GGG - chr3_3:76595625-76595644 Msa0473870:five_prime_UTR 35.0%
!! ATCTCCATAGAGTGTTGTAT+TGG - chr3_3:76595678-76595697 Msa0473870:five_prime_UTR 35.0%
TTGGCAGGTTAATTCCTAAA+TGG - chr3_3:76595697-76595716 Msa0473870:five_prime_UTR 35.0%
! GTGATTGTTGTTGGAATTGG+AGG + chr3_3:76593298-76593317 None:intergenic 40.0%
ATGTGAGGATGAGTTTGAGA+GGG - chr3_3:76593833-76593852 Msa0473870:CDS 40.0%
ATGAGTTTGAGAGGGAAGAA+CGG - chr3_3:76593841-76593860 Msa0473870:CDS 40.0%
AGAAAGGGTAATTCTTCGAG+TGG - chr3_3:76593943-76593962 Msa0473870:CDS 40.0%
GTAGGCAAGTCTTTCATTTG+AGG - chr3_3:76594362-76594381 Msa0473870:intron 40.0%
! TTGAAGGAAGTATGGAGAGA+CGG - chr3_3:76594451-76594470 Msa0473870:intron 40.0%
TGCAGGCATTATGTTCACAA+AGG - chr3_3:76594615-76594634 Msa0473870:intron 40.0%
GCAGGCATTATGTTCACAAA+GGG - chr3_3:76594616-76594635 Msa0473870:intron 40.0%
GTCCTGTTTACAATACCTTG+AGG - chr3_3:76594645-76594664 Msa0473870:intron 40.0%
!! AGCCTCAAGGTATTGTAAAC+AGG + chr3_3:76594650-76594669 None:intergenic 40.0%
ACGAGATGTCGAGTTACATT+CGG + chr3_3:76594796-76594815 None:intergenic 40.0%
TGTCAACCTTTCAGGATTGA+CGG + chr3_3:76595004-76595023 None:intergenic 40.0%
GATTGAACACATCTCAAGAC+AGG - chr3_3:76595047-76595066 Msa0473870:CDS 40.0%
!! GACAGGTTGATAACATCAAC+TGG - chr3_3:76595064-76595083 Msa0473870:CDS 40.0%
TGAACTCAGTAGAGTTTCAG+CGG - chr3_3:76595197-76595216 Msa0473870:CDS 40.0%
ACATAGGTGAAAACCATGCT+TGG + chr3_3:76595287-76595306 None:intergenic 40.0%
CAGCCAAAGTCTAACAACAT+AGG + chr3_3:76595303-76595322 None:intergenic 40.0%
CTATGTTGTTAGACTTTGGC+TGG - chr3_3:76595301-76595320 Msa0473870:CDS 40.0%
! AAAGGTTTTGCAAGAGGCTA+TGG - chr3_3:76595353-76595372 Msa0473870:CDS 40.0%
! AAGGTTTTGCAAGAGGCTAT+GGG - chr3_3:76595354-76595373 Msa0473870:CDS 40.0%
GCAACAACACACTTTGTTCA+TGG - chr3_3:76595404-76595423 Msa0473870:CDS 40.0%
AATGGTTTCACCACTTCTCA+AGG - chr3_3:76595427-76595446 Msa0473870:CDS 40.0%
! GCAAAGCATTCCAAATTTGG+TGG - chr3_3:76595475-76595494 Msa0473870:CDS 40.0%
ATGATCTACGCCACCAAATT+TGG + chr3_3:76595488-76595507 None:intergenic 40.0%
! GCTTGCTTAAGCTTTGGCTT+TGG + chr3_3:76593193-76593212 None:intergenic 45.0%
!!! GAAGAGTGTGGTTTTGGGTT+GGG + chr3_3:76593259-76593278 None:intergenic 45.0%
!! ATGGGGAAGAGTGTGGTTTT+GGG + chr3_3:76593264-76593283 None:intergenic 45.0%
!! TATGGGGAAGAGTGTGGTTT+TGG + chr3_3:76593265-76593284 None:intergenic 45.0%
! ATGCACATGATGGTGTAAGG+AGG + chr3_3:76593343-76593362 None:intergenic 45.0%
! CACATGCACATGATGGTGTA+AGG + chr3_3:76593346-76593365 None:intergenic 45.0%
CGAAAGAGCAACACCATGTT+CGG + chr3_3:76593471-76593490 None:intergenic 45.0%
!! GTTTGATGGGTGGGTTATCT+GGG + chr3_3:76593510-76593529 None:intergenic 45.0%
TTGGATATGGGTTCGGACTT+GGG + chr3_3:76593547-76593566 None:intergenic 45.0%
!! AAAGTGGTGGGCTTGGATAT+GGG + chr3_3:76593559-76593578 None:intergenic 45.0%
! TGCTGGATTTGGAGCTTTGA+GGG + chr3_3:76593603-76593622 None:intergenic 45.0%
! TCGGAGATGGATTTGATGTG+AGG - chr3_3:76593818-76593837 Msa0473870:CDS 45.0%
GATGTGAGGATGAGTTTGAG+AGG - chr3_3:76593832-76593851 Msa0473870:CDS 45.0%
! CGCTAATTCGGAGGTTTTTG+CGG - chr3_3:76593903-76593922 Msa0473870:CDS 45.0%
! GCTAATTCGGAGGTTTTTGC+GGG - chr3_3:76593904-76593923 Msa0473870:CDS 45.0%
! CTAATTCGGAGGTTTTTGCG+GGG - chr3_3:76593905-76593924 Msa0473870:CDS 45.0%
! GGTTTTTGCGGGGTTAATTG+CGG - chr3_3:76593915-76593934 Msa0473870:CDS 45.0%
AAGGGTAATTCTTCGAGTGG+TGG - chr3_3:76593946-76593965 Msa0473870:CDS 45.0%
GTCTCTCCATACTTCCTTCA+AGG + chr3_3:76594452-76594471 None:intergenic 45.0%
AATACCTTGAGGCTGTTCCT+TGG - chr3_3:76594656-76594675 Msa0473870:intron 45.0%
TCTTCTTCCTCTTCTGTCCA+AGG + chr3_3:76594676-76594695 None:intergenic 45.0%
GAAACTACGAGGGACATTCT+AGG - chr3_3:76594736-76594755 Msa0473870:intron 45.0%
ATGTCGAGTTACATTCGGCT+GGG + chr3_3:76594791-76594810 None:intergenic 45.0%
!! TGCATTGGCATTGACACATG+TGG + chr3_3:76594830-76594849 None:intergenic 45.0%
CGTCTTTGCTTAGGTCAAGA+TGG + chr3_3:76594915-76594934 None:intergenic 45.0%
TCAGAGAGTCAATACACGAG+TGG + chr3_3:76594954-76594973 None:intergenic 45.0%
! GCTTGATGGACAAATAGCAG+AGG - chr3_3:76595101-76595120 Msa0473870:CDS 45.0%
GCACAATAATGCATCCCCTA+TGG - chr3_3:76595167-76595186 Msa0473870:CDS 45.0%
! TTGCAATTTTCTCGTGGCCA+TGG + chr3_3:76595235-76595254 None:intergenic 45.0%
CCACGAGAAAATTGCAATGC+CGG - chr3_3:76595238-76595257 Msa0473870:CDS 45.0%
GAGAAAATTGCAATGCCGGT+TGG - chr3_3:76595242-76595261 Msa0473870:CDS 45.0%
TTTCACCACTTCTCAAGGCA+TGG - chr3_3:76595432-76595451 Msa0473870:CDS 45.0%
CCTGCCAATACAACACTCTA+TGG + chr3_3:76595685-76595704 None:intergenic 45.0%
!! CCATAGAGTGTTGTATTGGC+AGG - chr3_3:76595682-76595701 Msa0473870:five_prime_UTR 45.0%
! TGGGTTGGGTGAAGAAAACG+AGG + chr3_3:76593245-76593264 None:intergenic 50.0%
!!! GGAAGAGTGTGGTTTTGGGT+TGG + chr3_3:76593260-76593279 None:intergenic 50.0%
ACTGCTGCACATGCACATGA+TGG + chr3_3:76593353-76593372 None:intergenic 50.0%
!! AGCAACACCATGTTCGGTGT+CGG + chr3_3:76593465-76593484 None:intergenic 50.0%
!! GGTTTGATGGGTGGGTTATC+TGG + chr3_3:76593511-76593530 None:intergenic 50.0%
TTGGGCTTACGGGGTTTGAT+GGG + chr3_3:76593523-76593542 None:intergenic 50.0%
ATTGGGCTTACGGGGTTTGA+TGG + chr3_3:76593524-76593543 None:intergenic 50.0%
ATGGGTTCGGACTTGGGATT+GGG + chr3_3:76593541-76593560 None:intergenic 50.0%
TATGGGTTCGGACTTGGGAT+TGG + chr3_3:76593542-76593561 None:intergenic 50.0%
CTTGGATATGGGTTCGGACT+TGG + chr3_3:76593548-76593567 None:intergenic 50.0%
!! GAAAGTGGTGGGCTTGGATA+TGG + chr3_3:76593560-76593579 None:intergenic 50.0%
ATGGAGGAGGAGAAAGTGGT+GGG + chr3_3:76593571-76593590 None:intergenic 50.0%
TATGGAGGAGGAGAAAGTGG+TGG + chr3_3:76593572-76593591 None:intergenic 50.0%
TGGTATGGAGGAGGAGAAAG+TGG + chr3_3:76593575-76593594 None:intergenic 50.0%
TTGAGGGGAGTTTGGTATGG+AGG + chr3_3:76593587-76593606 None:intergenic 50.0%
!! GCTTTGAGGGGAGTTTGGTA+TGG + chr3_3:76593590-76593609 None:intergenic 50.0%
!! TTGGAGCTTTGAGGGGAGTT+TGG + chr3_3:76593595-76593614 None:intergenic 50.0%
!! GCTGGATTTGGAGCTTTGAG+GGG + chr3_3:76593602-76593621 None:intergenic 50.0%
! GTGCTGGATTTGGAGCTTTG+AGG + chr3_3:76593604-76593623 None:intergenic 50.0%
CTCTTCCCGGAGATAAGATC+CGG + chr3_3:76593651-76593670 None:intergenic 50.0%
TCTATGGGAGAGACTCTTCC+CGG + chr3_3:76593664-76593683 None:intergenic 50.0%
GTGAATTGAGAACCGGAGAG+GGG + chr3_3:76593714-76593733 None:intergenic 50.0%
GGTGAATTGAGAACCGGAGA+GGG + chr3_3:76593715-76593734 None:intergenic 50.0%
AGGTGAATTGAGAACCGGAG+AGG + chr3_3:76593716-76593735 None:intergenic 50.0%
GACGGAGGTGAATTGAGAAC+CGG + chr3_3:76593721-76593740 None:intergenic 50.0%
AAGCTACGAGATCTTGACGG+AGG + chr3_3:76593736-76593755 None:intergenic 50.0%
CGGAAGCTACGAGATCTTGA+CGG + chr3_3:76593739-76593758 None:intergenic 50.0%
TTGGAGCGGTAATAGGTGCA+CGG + chr3_3:76593759-76593778 None:intergenic 50.0%
GGTGGAATTGGAGCGGTAAT+AGG + chr3_3:76593766-76593785 None:intergenic 50.0%
AGTTTGAGAGGGAAGAACGG+TGG - chr3_3:76593844-76593863 Msa0473870:CDS 50.0%
GGTAATTCTTCGAGTGGTGG+TGG - chr3_3:76593949-76593968 Msa0473870:CDS 50.0%
!! AATTCTTCGAGTGGTGGTGG+TGG - chr3_3:76593952-76593971 Msa0473870:CDS 50.0%
TATGGAGAGACGGTGAGACA+TGG - chr3_3:76594461-76594480 Msa0473870:intron 50.0%
! TTGTGTCACTAGGTGTCTGC+AGG - chr3_3:76594598-76594617 Msa0473870:intron 50.0%
! CTACGAGGGACATTCTAGGA+AGG - chr3_3:76594740-76594759 Msa0473870:intron 50.0%
CATTCGGCTGGGAATCTTCT+GGG + chr3_3:76594780-76594799 None:intergenic 50.0%
ACATTCGGCTGGGAATCTTC+TGG + chr3_3:76594781-76594800 None:intergenic 50.0%
GATGTCGAGTTACATTCGGC+TGG + chr3_3:76594792-76594811 None:intergenic 50.0%
CTCTCTGATCAGCCTCTTTG+AGG - chr3_3:76594966-76594985 Msa0473870:CDS 50.0%
! TCTGATCAGCCTCTTTGAGG+AGG - chr3_3:76594969-76594988 Msa0473870:CDS 50.0%
CCTTTCAGGATTGACGGTGT+CGG + chr3_3:76594998-76595017 None:intergenic 50.0%
! AGCGGTTCTGTTTGTTGCCA+TGG - chr3_3:76595215-76595234 Msa0473870:CDS 50.0%
! CCGGCATTGCAATTTTCTCG+TGG + chr3_3:76595241-76595260 None:intergenic 50.0%
TGGCTGCAGAGATGCAGAAA+AGG - chr3_3:76595321-76595340 Msa0473870:CDS 50.0%
GGCTGCAGAGATGCAGAAAA+GGG - chr3_3:76595322-76595341 Msa0473870:CDS 50.0%
GGGTTATCTGGGCTTGAAGG+TGG + chr3_3:76593499-76593518 None:intergenic 55.0%
!! GGTGGGTTATCTGGGCTTGA+AGG + chr3_3:76593502-76593521 None:intergenic 55.0%
! GCTTACGGGGTTTGATGGGT+GGG + chr3_3:76593519-76593538 None:intergenic 55.0%
GACTTGGGATTGGGCTTACG+GGG + chr3_3:76593532-76593551 None:intergenic 55.0%
GGACTTGGGATTGGGCTTAC+GGG + chr3_3:76593533-76593552 None:intergenic 55.0%
CGGACTTGGGATTGGGCTTA+CGG + chr3_3:76593534-76593553 None:intergenic 55.0%
! GGTGGGCTTGGATATGGGTT+CGG + chr3_3:76593554-76593573 None:intergenic 55.0%
AGGGGAGTTTGGTATGGAGG+AGG + chr3_3:76593584-76593603 None:intergenic 55.0%
!! AGCAATGCGGGTGCTGGATT+TGG + chr3_3:76593614-76593633 None:intergenic 55.0%
AATCCAGCACCCGCATTGCT+CGG - chr3_3:76593614-76593633 Msa0473870:CDS 55.0%
ACGGCGGCAGAGTCTTCTAT+GGG + chr3_3:76593679-76593698 None:intergenic 55.0%
AACGGCGGCAGAGTCTTCTA+TGG + chr3_3:76593680-76593699 None:intergenic 55.0%
AGAGGGGTTGTGATCGGGAA+CGG + chr3_3:76593698-76593717 None:intergenic 55.0%
AACCGGAGAGGGGTTGTGAT+CGG + chr3_3:76593704-76593723 None:intergenic 55.0%
!! ATCTCCGACACTGACTCCGA+CGG + chr3_3:76593806-76593825 None:intergenic 55.0%
CTGTCCAAGGAACAGCCTCA+AGG + chr3_3:76594663-76594682 None:intergenic 55.0%
GGCTGTTCCTTGGACAGAAG+AGG - chr3_3:76594666-76594685 Msa0473870:intron 55.0%
TGTCGGATGCCTCCTCAAAG+AGG + chr3_3:76594981-76595000 None:intergenic 55.0%
CCGACACCGTCAATCCTGAA+AGG - chr3_3:76594995-76595014 Msa0473870:CDS 55.0%
! TGCCGGTTGGAAGCTAGATC+AGG - chr3_3:76595255-76595274 Msa0473870:CDS 55.0%
GCCGGTTGGAAGCTAGATCA+GGG - chr3_3:76595256-76595275 Msa0473870:CDS 55.0%
! GCCCTGATCTAGCTTCCAAC+CGG + chr3_3:76595260-76595279 None:intergenic 55.0%
GATCAGGGCTTCTCCAAGCA+TGG - chr3_3:76595271-76595290 Msa0473870:CDS 55.0%
CAGTGCCATGCCTTGAGAAG+TGG + chr3_3:76595440-76595459 None:intergenic 55.0%
ATCGACGCCGACACCGAACA+TGG - chr3_3:76593455-76593474 Msa0473870:CDS 60.0%
GGCTTACGGGGTTTGATGGG+TGG + chr3_3:76593520-76593539 None:intergenic 60.0%
!! GGAGGAGAAAGTGGTGGGCT+TGG + chr3_3:76593566-76593585 None:intergenic 60.0%
AGGGTCGATCCGAGCAATGC+GGG + chr3_3:76593626-76593645 None:intergenic 60.0%
GAGGGTCGATCCGAGCAATG+CGG + chr3_3:76593627-76593646 None:intergenic 60.0%
CCGGAGATAAGATCCGGCGA+GGG + chr3_3:76593645-76593664 None:intergenic 60.0%
CCCTCGCCGGATCTTATCTC+CGG - chr3_3:76593642-76593661 Msa0473870:CDS 60.0%
CCTCGCCGGATCTTATCTCC+GGG - chr3_3:76593643-76593662 Msa0473870:CDS 60.0%
TCCCGATCACAACCCCTCTC+CGG - chr3_3:76593699-76593718 Msa0473870:CDS 60.0%
ACCGGAGAGGGGTTGTGATC+GGG + chr3_3:76593703-76593722 None:intergenic 60.0%
TTCATCGGCGGCGGTGGAAT+TGG + chr3_3:76593778-76593797 None:intergenic 60.0%
ACTCCGACGGCGGAGTTCAT+CGG + chr3_3:76593793-76593812 None:intergenic 60.0%
! GTCGGAGTCAGTGTCGGAGA+TGG - chr3_3:76593805-76593824 Msa0473870:CDS 60.0%
!! TCTTCGAGTGGTGGTGGTGG+TGG - chr3_3:76593955-76593974 Msa0473870:CDS 60.0%
GGAGAGACGGTGAGACATGG+AGG - chr3_3:76594464-76594483 Msa0473870:intron 60.0%
GATCCGAGCAATGCGGGTGC+TGG + chr3_3:76593620-76593639 None:intergenic 65.0%
TTGCTCGGATCGACCCTCGC+CGG - chr3_3:76593629-76593648 Msa0473870:CDS 65.0%
CCCGGAGATAAGATCCGGCG+AGG + chr3_3:76593646-76593665 None:intergenic 65.0%
GGGGTTGTGATCGGGAACGG+CGG + chr3_3:76593695-76593714 None:intergenic 65.0%
TCCGCCGTCGGAGTCAGTGT+CGG - chr3_3:76593799-76593818 Msa0473870:CDS 65.0%
!! TCCGACACTGACTCCGACGG+CGG + chr3_3:76593803-76593822 None:intergenic 65.0%
CGGCGGCGGTGGAATTGGAG+CGG + chr3_3:76593773-76593792 None:intergenic 70.0%
ACGGCGGAGTTCATCGGCGG+CGG + chr3_3:76593787-76593806 None:intergenic 70.0%
CCGACGGCGGAGTTCATCGG+CGG + chr3_3:76593790-76593809 None:intergenic 70.0%
CCGCCGATGAACTCCGCCGT+CGG - chr3_3:76593787-76593806 Msa0473870:CDS 70.0%
GCGGAGTTCATCGGCGGCGG+TGG + chr3_3:76593784-76593803 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 76593137 76595799 76593137 ID=Msa0473870;Name=Msa0473870
chr3_3 mRNA 76593137 76595799 76593137 ID=Msa0473870-mRNA-1;Parent=Msa0473870;Name=Msa0473870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=284|1|1|1|1|1|2|251|544
chr3_3 exon 76593137 76594326 76593137 ID=Msa0473870-mRNA-1:exon:20152;Parent=Msa0473870-mRNA-1
chr3_3 exon 76594820 76595799 76594820 ID=Msa0473870-mRNA-1:exon:20151;Parent=Msa0473870-mRNA-1
chr3_3 five_prime_UTR 76595516 76595799 76595516 ID=Msa0473870-mRNA-1:five_prime_utr;Parent=Msa0473870-mRNA-1
chr3_3 CDS 76594820 76595515 76594820 ID=Msa0473870-mRNA-1:cds;Parent=Msa0473870-mRNA-1
chr3_3 CDS 76593388 76594326 76593388 ID=Msa0473870-mRNA-1:cds;Parent=Msa0473870-mRNA-1
chr3_3 three_prime_UTR 76593137 76593387 76593137 ID=Msa0473870-mRNA-1:three_prime_utr;Parent=Msa0473870-mRNA-1
Gene Sequence

>Msa0473870

ATGGATTCTTCTTCTTCTTCTTCTTCTTCATATCATCGACGCCGACACCGAACATGGTGTTGCTCTTTCGCTGTTCCACCTTCAAGCCCAGATAACCCACCCATCAAACCCCGTAAGCCCAATCCCAAGTCCGAACCCATATCCAAGCCCACCACTTTCTCCTCCTCCATACCAAACTCCCCTCAAAGCTCCAAATCCAGCACCCGCATTGCTCGGATCGACCCTCGCCGGATCTTATCTCCGGGAAGAGTCTCTCCCATAGAAGACTCTGCCGCCGTTCCCGATCACAACCCCTCTCCGGTTCTCAATTCACCTCCGTCAAGATCTCGTAGCTTCCGTGCACCTATTACCGCTCCAATTCCACCGCCGCCGATGAACTCCGCCGTCGGAGTCAGTGTCGGAGATGGATTTGATGTGAGGATGAGTTTGAGAGGGAAGAACGGTGGTTGTATTGTTTTAGAGCTTAATTCAGCAATTTTATGCGCTAATTCGGAGGTTTTTGCGGGGTTAATTGCGGATTATAGAAAGGGTAATTCTTCGAGTGGTGGTGGTGGTGGTAACAAAATGTGTAGAATTGAGGTTCCTGAAGTTGATAATTTGGGTGTTTTTAGAGAAACTATTGAGCTTATGTTTGAAGATGATGTTGCTAAAAGACTTCTCAATATCGGTGTTTATAGATCCATTGATGTTTTAGAGGTGTCTGCAGGCATTATGTTCACAAAGGGTGTTTTGTCCTGTTTACAATACCTTGAGGCTGTTCCTTGGACAGAAGAGGAAGAAGAGAAATTAAGAAACTTGTTCACAAGATTTAAGTTTGATGATGAAACTACGAGGGACATTCTAGGAAGGCTTTACTTGCACGACCCAGAAGATTCCCAGCCGAATGTAACTCGACATCTCGTTTGTTCTATCACCACATGTGTCAATGCCAATGCAAGAAATGAGTTGAAATCACTAGTTAAAGGTCTTCTTTGTAAAAGCTCGGTGTATGAGAAGAACCATCTTGACCTAAGCAAAGACGATCTCTATTCTGTTTGCCACTCGTGTATTGACTCTCTGATCAGCCTCTTTGAGGAGGCATCCGACACCGTCAATCCTGAAAGGTTGACAAAAAAAGATACGAATAAACCGATGATTGAACACATCTCAAGACAGGTTGATAACATCAACTGGTTGTTGGAAATCATGCTTGATGGACAAATAGCAGAGGATTTTGTGGATATATGGTCTGATCAGCACCAACTTCTTAAAATGCACAATAATGCATCCCCTATGGTTAGATATGAACTCAGTAGAGTTTCAGCGGTTCTGTTTGTTGCCATGGCCACGAGAAAATTGCAATGCCGGTTGGAAGCTAGATCAGGGCTTCTCCAAGCATGGTTTTCACCTATGTTGTTAGACTTTGGCTGGCTGCAGAGATGCAGAAAAGGGCTTGATATAAAGGTTTTGCAAGAGGCTATGGGTCAGACACTTCTTACTTTGCCTTTAAAGCAACAACACACTTTGTTCATGGAATGGTTTCACCACTTCTCAAGGCATGGCACTGAATGTCCTAATCTAAGCAAAGCATTCCAAATTTGGTGGCGTAGATCATTTTTAAGAGGCTCTGAAACTTATGCCATTGAATCAAGGTAA
Protein sequence

>Msa0473870

MDSSSSSSSSYHRRRHRTWCCSFAVPPSSPDNPPIKPRKPNPKSEPISKPTTFSSSIPNSPQSSKSSTRIARIDPRRILSPGRVSPIEDSAAVPDHNPSPVLNSPPSRSRSFRAPITAPIPPPPMNSAVGVSVGDGFDVRMSLRGKNGGCIVLELNSAILCANSEVFAGLIADYRKGNSSSGGGGGNKMCRIEVPEVDNLGVFRETIELMFEDDVAKRLLNIGVYRSIDVLEVSAGIMFTKGVLSCLQYLEAVPWTEEEEEKLRNLFTRFKFDDETTRDILGRLYLHDPEDSQPNVTRHLVCSITTCVNANARNELKSLVKGLLCKSSVYEKNHLDLSKDDLYSVCHSCIDSLISLFEEASDTVNPERLTKKDTNKPMIEHISRQVDNINWLLEIMLDGQIAEDFVDIWSDQHQLLKMHNNASPMVRYELSRVSAVLFVAMATRKLQCRLEARSGLLQAWFSPMLLDFGWLQRCRKGLDIKVLQEAMGQTLLTLPLKQQHTLFMEWFHHFSRHGTECPNLSKAFQIWWRRSFLRGSETYAIESR*