Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477750 | XP_013462006.1 | 97.408 | 1003 | 6 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1996 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477750 | sp|Q5ZL00|EMC1_CHICK | 29.665 | 1045 | 593 | 33 | 24 | 1003 | 16 | 983 | 2.16e-118 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477750 | A0A072V2Z0 | 97.408 | 1003 | 6 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1996 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0128360 | Msa0477750 | 0.814442 | 1.537728e-51 | -8.615850e-47 |
| Msa0477750 | Msa0519150 | 0.800501 | 1.399391e-48 | -8.615850e-47 |
| Msa0477750 | Msa0586450 | 0.812899 | 3.361118e-51 | -8.615850e-47 |
| Msa0477750 | Msa1031390 | 0.839982 | 1.143641e-57 | -8.615850e-47 |
| Msa0477750 | Msa1070890 | 0.808735 | 2.676135e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477750 | MtrunA17_Chr3g0139991 | 97.408 | 1003 | 6 | 1 | 1 | 1003 | 1 | 983 | 0.0 | 1996 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477750 | AT5G11560.1 | 65.404 | 1003 | 324 | 3 | 3 | 1003 | 1 | 982 | 0.0 | 1375 |
Find 242 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCATCTCTTCTTGTAAT+TGG | 0.112565 | 3_3:-82093390 | Msa0477750:CDS |
| GCACTTCCCTTTGCAACTTC+TGG | 0.129619 | 3_3:-82094691 | Msa0477750:CDS |
| GGGTGTCTTCATGCCATTTC+TGG | 0.139632 | 3_3:-82094978 | Msa0477750:CDS |
| TAAACAAACACTTGCGTTCT+TGG | 0.194711 | 3_3:-82098069 | Msa0477750:five_prime_UTR |
| CACAGGATAACAAAGATATT+TGG | 0.229804 | 3_3:-82091859 | Msa0477750:intron |
| AGTTGCTTTGTGAAACAAAT+AGG | 0.248566 | 3_3:-82089949 | Msa0477750:three_prime_UTR |
| CCGATTTCCCCACTGGCTTT+TGG | 0.254400 | 3_3:+82092326 | None:intergenic |
| ATGAATACTGCTTCGTATTC+AGG | 0.255983 | 3_3:-82093053 | Msa0477750:CDS |
| CGCCATGGCCATGGCGATTA+GGG | 0.259898 | 3_3:-82097960 | Msa0477750:exon |
| TTACTCAGATTGCTCCTTCT+AGG | 0.262009 | 3_3:-82090329 | Msa0477750:CDS |
| TCTCAATATTTCCTCTTTGA+TGG | 0.265891 | 3_3:+82094263 | None:intergenic |
| TGTAGGTATTTAGTGAAAAC+TGG | 0.270607 | 3_3:-82092117 | Msa0477750:intron |
| TTCGCCCCGTCTTCTGAGTA+TGG | 0.273204 | 3_3:+82097385 | None:intergenic |
| GCAGTTTGGAGGCATGTTCT+TGG | 0.284280 | 3_3:-82096966 | Msa0477750:intron |
| TGCAGGCACCAACAGTATAT+TGG | 0.286685 | 3_3:-82097429 | Msa0477750:intron |
| TCAATAGCTTCAGGAGTTCT+TGG | 0.297756 | 3_3:+82093183 | None:intergenic |
| GGTTTGGGAGTCTTCCCTTC+AGG | 0.301565 | 3_3:-82096017 | Msa0477750:CDS |
| ATTTGTTACTTATGTATTAT+CGG | 0.302509 | 3_3:-82090232 | Msa0477750:CDS |
| CACTTCCCTTTGCAACTTCT+GGG | 0.302922 | 3_3:-82094690 | Msa0477750:CDS |
| GCTTCGTATTCAGGGACTTA+TGG | 0.313725 | 3_3:-82093044 | Msa0477750:CDS |
| AAGAAATTACGCGTCCGATA+TGG | 0.319088 | 3_3:+82090169 | None:intergenic |
| TCGCCATGGCCATGGCGATT+AGG | 0.319893 | 3_3:-82097961 | Msa0477750:exon |
| TACCTGACGGGCAGATGGTT+TGG | 0.325931 | 3_3:-82096033 | Msa0477750:CDS |
| TGAGGTCTGAAACTTGCTTC+TGG | 0.333539 | 3_3:+82094569 | None:intergenic |
| ACCTCTAAGCAGCTTCTTAT+CGG | 0.334847 | 3_3:-82091698 | Msa0477750:CDS |
| GATATTTGGAAGTTTGTTCT+TGG | 0.340938 | 3_3:-82091845 | Msa0477750:CDS |
| TCCGATAAGAAGCTGCTTAG+AGG | 0.344251 | 3_3:+82091697 | None:intergenic |
| ACCTGACGGGCAGATGGTTT+GGG | 0.349641 | 3_3:-82096032 | Msa0477750:CDS |
| CCATTACATTCCTTTGTTTG+AGG | 0.357440 | 3_3:-82090043 | Msa0477750:three_prime_UTR |
| CATCAGGAGACTGTATAATA+TGG | 0.362998 | 3_3:+82094806 | None:intergenic |
| ATCATTAACTGCTGCTCTAA+TGG | 0.363794 | 3_3:-82093729 | Msa0477750:CDS |
| GTGTAACTGCAATTAGAATA+AGG | 0.372618 | 3_3:+82089897 | None:intergenic |
| CCGGGGATGGACGCATAGTT+TGG | 0.377141 | 3_3:-82093515 | Msa0477750:CDS |
| GCATAGACGGTGAAGTTCTC+TGG | 0.380569 | 3_3:-82094956 | Msa0477750:CDS |
| GTTTGGGAGTCTTCCCTTCA+GGG | 0.382494 | 3_3:-82096016 | Msa0477750:CDS |
| AGTAACAGTGCCTGCCAAAT+TGG | 0.383144 | 3_3:-82090394 | Msa0477750:CDS |
| TGCTGTTCCGATTTCCCCAC+TGG | 0.385316 | 3_3:+82092319 | None:intergenic |
| GGAAAGATCTAGAAGAGAAA+TGG | 0.389058 | 3_3:-82090206 | Msa0477750:CDS |
| AGGCTGCTGTATTGTCGATT+TGG | 0.394539 | 3_3:+82094422 | None:intergenic |
| CCTGATGTGATTTATGTAGC+TGG | 0.397420 | 3_3:-82094790 | Msa0477750:CDS |
| CAGCTTCTTATCGGAACAAT+TGG | 0.398831 | 3_3:-82091689 | Msa0477750:CDS |
| ATTTAACTGAAGAAAATGAT+TGG | 0.400025 | 3_3:+82089834 | None:intergenic |
| CCAAAAGCCAGTGGGGAAAT+CGG | 0.402007 | 3_3:-82092326 | Msa0477750:CDS |
| ATCCATCTCTTCTTGTAATT+GGG | 0.402204 | 3_3:-82093389 | Msa0477750:CDS |
| AACAGTCCTGGAAGCTTTGA+TGG | 0.403066 | 3_3:+82094514 | None:intergenic |
| GAACCTCTTCGAATGGCTTA+AGG | 0.405315 | 3_3:-82094038 | Msa0477750:intron |
| TGATAAATGTTAAGCCCAAC+TGG | 0.408225 | 3_3:+82093447 | None:intergenic |
| CTGTAAAGGATGTTAATGAT+TGG | 0.408833 | 3_3:-82094321 | Msa0477750:CDS |
| GAGGGATGTAGACTCCAATT+TGG | 0.409191 | 3_3:+82090380 | None:intergenic |
| GCAGGCACCAACAGTATATT+GGG | 0.409945 | 3_3:-82097428 | Msa0477750:intron |
| TTCAGAATCTCAATAGCTTC+AGG | 0.410731 | 3_3:+82093174 | None:intergenic |
| TTAATTAAAGTTACAAATGA+AGG | 0.411447 | 3_3:-82094463 | Msa0477750:CDS |
| CATGACCCACCACGGTTGCC+AGG | 0.412068 | 3_3:-82092231 | Msa0477750:CDS |
| TGTTCAGTTGAATCAGTATA+AGG | 0.412583 | 3_3:+82093252 | None:intergenic |
| TTCCTTTGTTTGAGGCTGAA+TGG | 0.413184 | 3_3:-82090035 | Msa0477750:three_prime_UTR |
| TTCAACAAGGAGAAATTGTC+TGG | 0.414197 | 3_3:-82094153 | Msa0477750:CDS |
| TGTATATTGAGGATTGAGAT+AGG | 0.416902 | 3_3:-82089994 | Msa0477750:three_prime_UTR |
| ACTGATAATGGTGTTATTAG+AGG | 0.418692 | 3_3:-82093114 | Msa0477750:CDS |
| TAACTTTAATTAAGAGAACT+TGG | 0.420091 | 3_3:+82094473 | None:intergenic |
| TATCGGAACAATTGGTGATC+AGG | 0.426179 | 3_3:-82091681 | Msa0477750:intron |
| TCCCAAACCATCTGCCCGTC+AGG | 0.426869 | 3_3:+82096031 | None:intergenic |
| ATATTACCATCAAAGCTTCC+AGG | 0.429030 | 3_3:-82094520 | Msa0477750:CDS |
| GATTGGTTAAAGAGAGGAAA+AGG | 0.437129 | 3_3:+82097921 | None:intergenic |
| GTTGCTTTGTGAAACAAATA+GGG | 0.437576 | 3_3:-82089948 | Msa0477750:three_prime_UTR |
| TACTCGGTTGAGACTGATAA+TGG | 0.442224 | 3_3:-82093126 | Msa0477750:CDS |
| GTAAAGAGAAGAAGCGAGAT+TGG | 0.443952 | 3_3:+82097904 | None:intergenic |
| GATATTAATGTTGTATATTG+AGG | 0.444793 | 3_3:-82090005 | Msa0477750:three_prime_UTR |
| AACACCAGAGGAGGCAACTT+TGG | 0.447248 | 3_3:-82092297 | Msa0477750:CDS |
| CGAAGATCAAGTTGGTCTCA+TGG | 0.448704 | 3_3:-82097882 | Msa0477750:CDS |
| TCATGGGTTCAGAGCATTGA+TGG | 0.450368 | 3_3:-82094203 | Msa0477750:CDS |
| CAATAGCTTCAGGAGTTCTT+GGG | 0.452351 | 3_3:+82093184 | None:intergenic |
| GGCACCAATGATGTTGTTGA+TGG | 0.456758 | 3_3:-82096945 | Msa0477750:CDS |
| AGCAGTTGAAGTCACTTCAA+TGG | 0.456893 | 3_3:+82091730 | None:intergenic |
| GTCATCACCCTTTCCTCTGA+TGG | 0.458294 | 3_3:-82096079 | Msa0477750:CDS |
| GACCTCATCAAGGATTCATC+TGG | 0.464150 | 3_3:-82094553 | Msa0477750:CDS |
| ACATCCCTCGTCTTTGCCTA+TGG | 0.465598 | 3_3:-82090366 | Msa0477750:CDS |
| ATAACCAAAGTTGCCTCCTC+TGG | 0.467336 | 3_3:+82092293 | None:intergenic |
| TCTTCTTTCTCAGCTTGTGA+GGG | 0.470188 | 3_3:+82091488 | None:intergenic |
| AAAATGACTCGTGATCATAA+TGG | 0.472672 | 3_3:-82093594 | Msa0477750:CDS |
| GTCAGAACTACCTGTGGAAA+AGG | 0.473051 | 3_3:-82094089 | Msa0477750:CDS |
| TGAAGGTGAGTTGGTGGCGC+TGG | 0.474644 | 3_3:-82094446 | Msa0477750:CDS |
| AGTGAATCGTAAGTCCTAGA+AGG | 0.475966 | 3_3:+82090315 | None:intergenic |
| TTCACTACCGATCATTTCTC+AGG | 0.480117 | 3_3:-82091444 | Msa0477750:intron |
| TAAAATTCAGCTCTCTGTAA+AGG | 0.484414 | 3_3:-82094335 | Msa0477750:CDS |
| ACACATTCCCTAAAAGTAGA+AGG | 0.484558 | 3_3:-82090429 | Msa0477750:CDS |
| CAAAAGCTTACAGCATGAAC+AGG | 0.485245 | 3_3:+82092206 | None:intergenic |
| AGGTGATAAGTTTGTGGTGT+TGG | 0.485329 | 3_3:-82094650 | Msa0477750:CDS |
| TTTGTTTGAGGCTGAATGGA+GGG | 0.485486 | 3_3:-82090031 | Msa0477750:three_prime_UTR |
| TTTGCTTTGCATACCGGGGA+TGG | 0.485539 | 3_3:-82093528 | Msa0477750:CDS |
| TGAATACTGCTTCGTATTCA+GGG | 0.486338 | 3_3:-82093052 | Msa0477750:CDS |
| ATATTTGGAAGTTTGTTCTT+GGG | 0.487397 | 3_3:-82091844 | Msa0477750:CDS |
| TGCTTTGCTGAAGGAAAACT+TGG | 0.490579 | 3_3:-82094293 | Msa0477750:CDS |
| GCTTAACATTTATCAGTGGC+AGG | 0.492266 | 3_3:-82093439 | Msa0477750:CDS |
| TTCACCGTCTATGCCAGAAA+TGG | 0.492390 | 3_3:+82094965 | None:intergenic |
| AATCCCATCAACAACATCAT+TGG | 0.493058 | 3_3:+82096941 | None:intergenic |
| CTTATAGTACTTACAAGGGC+AGG | 0.493287 | 3_3:-82093558 | Msa0477750:CDS |
| GGGGAATCATTATCAGTCTC+AGG | 0.493338 | 3_3:-82094670 | Msa0477750:CDS |
| GTCAGAACAGATAGATCTCA+TGG | 0.496977 | 3_3:-82094220 | Msa0477750:CDS |
| AGATGATCTGTCTTCCATAT+CGG | 0.498451 | 3_3:-82090183 | Msa0477750:exon |
| TGAAGTGACTTCAACTGCTA+AGG | 0.499221 | 3_3:-82091726 | Msa0477750:CDS |
| AGTTGCTTATAGTACTTACA+AGG | 0.500412 | 3_3:-82093563 | Msa0477750:CDS |
| AACCCTAATCGCCATGGCCA+TGG | 0.501028 | 3_3:+82097958 | None:intergenic |
| CCTCAAACAAAGGAATGTAA+TGG | 0.501249 | 3_3:+82090043 | None:intergenic |
| AAATAGCTATTCAAAAGCTT+AGG | 0.505306 | 3_3:-82093638 | Msa0477750:CDS |
| AGAGTGAATGTGTGAGTGAT+GGG | 0.505984 | 3_3:+82098000 | None:intergenic |
| TTCTTCTTTCTCAGCTTGTG+AGG | 0.507689 | 3_3:+82091487 | None:intergenic |
| TATACTTCCATCAGAGGAAA+GGG | 0.508495 | 3_3:+82096072 | None:intergenic |
| TCACCTTCCCAATATACTGT+TGG | 0.508929 | 3_3:+82097421 | None:intergenic |
| AGTTACAAATGAAGGTGAGT+TGG | 0.509444 | 3_3:-82094455 | Msa0477750:CDS |
| TTGATTCCTTTGATCCCTGA+AGG | 0.511496 | 3_3:+82096002 | None:intergenic |
| TCGAGGTCTATGACCAGTCT+CGG | 0.512629 | 3_3:-82092042 | Msa0477750:CDS |
| TGGTCGGTAATAAGAAGAGA+TGG | 0.512641 | 3_3:+82091802 | None:intergenic |
| CATCAAGGATTCATCTGGAC+AGG | 0.512869 | 3_3:-82094548 | Msa0477750:CDS |
| ATGAAGTGAATGCAAAGAGC+GGG | 0.513421 | 3_3:-82094738 | Msa0477750:CDS |
| CGCCCAATTACAAGAAGAGA+TGG | 0.517391 | 3_3:+82093387 | None:intergenic |
| GCTGACATACCGCCCGAGAC+TGG | 0.517521 | 3_3:+82092029 | None:intergenic |
| GATGGGATTGACATTGCCCT+TGG | 0.518319 | 3_3:-82096927 | Msa0477750:CDS |
| ATCAAGTTGGTCTCATGGAT+TGG | 0.519349 | 3_3:-82097877 | Msa0477750:intron |
| CAGATCCATCGCCATGGCCA+TGG | 0.519382 | 3_3:-82097969 | Msa0477750:exon |
| CATGCCATTTCTGGCATAGA+CGG | 0.521747 | 3_3:-82094969 | Msa0477750:CDS |
| GTGTTCCATACTCAGAAGAC+GGG | 0.522168 | 3_3:-82097390 | Msa0477750:CDS |
| TTGTGGTGTTGGATGATGTA+AGG | 0.522985 | 3_3:-82094639 | Msa0477750:CDS |
| CTCCATTCAGCCTCAAACAA+AGG | 0.523314 | 3_3:+82090033 | None:intergenic |
| GAGCCCTGAGATTAAAATAG+TGG | 0.524090 | 3_3:+82092086 | None:intergenic |
| GTTCAGAGCATTGATGGTAA+TGG | 0.526198 | 3_3:-82094197 | Msa0477750:CDS |
| CCAGCTACATAAATCACATC+AGG | 0.526361 | 3_3:+82094790 | None:intergenic |
| GATGTAGACTCCAATTTGGC+AGG | 0.527479 | 3_3:+82090384 | None:intergenic |
| AGTCTCAGGTGATAAGTTTG+TGG | 0.529071 | 3_3:-82094656 | Msa0477750:CDS |
| AATCGCCATGGCCATGGCGA+TGG | 0.529506 | 3_3:+82097964 | None:intergenic |
| AGTACTTACAAGGGCAGGAA+AGG | 0.530738 | 3_3:-82093553 | Msa0477750:CDS |
| TATATCATTGATACTGTGAC+TGG | 0.532794 | 3_3:-82092269 | Msa0477750:CDS |
| ATCGGTAGTGAATCAGTAAG+AGG | 0.536980 | 3_3:+82091455 | None:intergenic |
| AGGATTGTGAACATCCAGTT+GGG | 0.537160 | 3_3:-82093461 | Msa0477750:CDS |
| CCAAACTATGCGTCCATCCC+CGG | 0.537428 | 3_3:+82093515 | None:intergenic |
| TGAGGGATTGAGAGTCCGAC+GGG | 0.540387 | 3_3:+82091505 | None:intergenic |
| GTCTTCCCTTCAGGGATCAA+AGG | 0.544092 | 3_3:-82096008 | Msa0477750:CDS |
| TCTCTTTACGAAGATCAAGT+TGG | 0.545894 | 3_3:-82097890 | Msa0477750:CDS |
| TTCAAATATATACTGGTACT+CGG | 0.546769 | 3_3:-82093142 | Msa0477750:CDS |
| AAGCGAGATTGGTTAAAGAG+AGG | 0.551732 | 3_3:+82097915 | None:intergenic |
| TACAAATGAAGGTGAGTTGG+TGG | 0.553549 | 3_3:-82094452 | Msa0477750:CDS |
| TTGTTTGAGGCTGAATGGAG+GGG | 0.554686 | 3_3:-82090030 | Msa0477750:three_prime_UTR |
| CAATGCTCTGTCAATTTCAG+AGG | 0.556372 | 3_3:-82094395 | Msa0477750:CDS |
| GAGGATTGTGAACATCCAGT+TGG | 0.560024 | 3_3:-82093462 | Msa0477750:CDS |
| GTATACTTCCATCAGAGGAA+AGG | 0.560313 | 3_3:+82096071 | None:intergenic |
| GCACCAATGATGTTGTTGAT+GGG | 0.562200 | 3_3:-82096944 | Msa0477750:CDS |
| ATGACCCACCACGGTTGCCA+GGG | 0.562846 | 3_3:-82092230 | Msa0477750:CDS |
| TCACAAGCTGAGAAAGAAGA+AGG | 0.563073 | 3_3:-82091485 | Msa0477750:CDS |
| CTATTCAAAAGCTTAGGTTG+AGG | 0.563691 | 3_3:-82093632 | Msa0477750:CDS |
| AAGAGTGAATGTGTGAGTGA+TGG | 0.565004 | 3_3:+82097999 | None:intergenic |
| AACTTTAATTAAGAGAACTT+GGG | 0.565474 | 3_3:+82094474 | None:intergenic |
| ATTGTAATCTTCGAGTTCCA+CGG | 0.565685 | 3_3:+82098024 | None:intergenic |
| AGGACCCTGGCAACCGTGGT+GGG | 0.566124 | 3_3:+82092226 | None:intergenic |
| GTTGAATCAGTATAAGGCAG+TGG | 0.566656 | 3_3:+82093258 | None:intergenic |
| TCATACTTTGCGTAAATCAG+AGG | 0.568075 | 3_3:-82093481 | Msa0477750:CDS |
| ACAGTTGGCGCAGTCACACT+TGG | 0.569345 | 3_3:+82093357 | None:intergenic |
| GAACTTACCTGACGGGCAGA+TGG | 0.569560 | 3_3:-82096038 | Msa0477750:CDS |
| CTTCTTGTAATTGGGCGATG+TGG | 0.570637 | 3_3:-82093381 | Msa0477750:CDS |
| TTTGAGGCTGAATGGAGGGG+AGG | 0.571948 | 3_3:-82090027 | Msa0477750:three_prime_UTR |
| GAAGTGACTTCAACTGCTAA+GGG | 0.572594 | 3_3:-82091725 | Msa0477750:CDS |
| ATTGTCTTCATATTGAACAA+AGG | 0.574065 | 3_3:+82094357 | None:intergenic |
| TCAAGAAAAGAAATAACAGT+TGG | 0.575622 | 3_3:+82093342 | None:intergenic |
| CTTTGTTTGAGGCTGAATGG+AGG | 0.576197 | 3_3:-82090032 | Msa0477750:three_prime_UTR |
| CGGAACAGCAACACCAGAGG+AGG | 0.576554 | 3_3:-82092306 | Msa0477750:CDS |
| GGTTCCACATCATCATGCAC+TGG | 0.578057 | 3_3:-82093418 | Msa0477750:CDS |
| AGCTACAACATTCTCTTCAG+TGG | 0.579214 | 3_3:+82097347 | None:intergenic |
| GCAAGTTTCAGACCTCATCA+AGG | 0.579316 | 3_3:-82094563 | Msa0477750:CDS |
| TTACAGCATGAACAGGACCC+TGG | 0.580099 | 3_3:+82092213 | None:intergenic |
| ATGGAAGTATACTGAGAGCA+TGG | 0.580158 | 3_3:-82096060 | Msa0477750:CDS |
| ATGGTCAATTGTATTCCCAT+CGG | 0.582081 | 3_3:-82093025 | Msa0477750:CDS |
| GTAGGTATTTAGTGAAAACT+GGG | 0.582984 | 3_3:-82092116 | Msa0477750:intron |
| TAATGGTGGAACTTTCATGA+AGG | 0.584263 | 3_3:-82093712 | Msa0477750:CDS |
| GATTCCCCAGAAGTTGCAAA+GGG | 0.590687 | 3_3:+82094685 | None:intergenic |
| TCTTGATGCATACACAGGGA+AGG | 0.590779 | 3_3:-82093325 | Msa0477750:CDS |
| TACAAATCTCTCCATGGCGA+AGG | 0.591785 | 3_3:+82097316 | None:intergenic |
| AATTGACAGAGCATTGCTAA+AGG | 0.592188 | 3_3:+82094402 | None:intergenic |
| TGATTCCCCAGAAGTTGCAA+AGG | 0.592939 | 3_3:+82094684 | None:intergenic |
| GAGCATGGAACTTACCTGAC+GGG | 0.593894 | 3_3:-82096045 | Msa0477750:CDS |
| GGAGAAACACGTACTTCAGA+AGG | 0.594698 | 3_3:-82089973 | Msa0477750:three_prime_UTR |
| CGAGGTCTATGACCAGTCTC+GGG | 0.594730 | 3_3:-82092041 | Msa0477750:CDS |
| TGATTCCTTTGATCCCTGAA+GGG | 0.594748 | 3_3:+82096003 | None:intergenic |
| TAGAACAGAACCTCTTCGAA+TGG | 0.599301 | 3_3:-82094045 | Msa0477750:CDS |
| CAGGACCCTGGCAACCGTGG+TGG | 0.599458 | 3_3:+82092225 | None:intergenic |
| ACTTCCCTTTGCAACTTCTG+GGG | 0.600142 | 3_3:-82094689 | Msa0477750:CDS |
| GAACAGGACCCTGGCAACCG+TGG | 0.601108 | 3_3:+82092222 | None:intergenic |
| GGACATTTGCTGAAACTCAA+AGG | 0.601815 | 3_3:-82093690 | Msa0477750:CDS |
| ATGCAGCACCAAAAGCCAGT+GGG | 0.601937 | 3_3:-82092334 | Msa0477750:CDS |
| ATTAACTGCTGCTCTAATGG+TGG | 0.601937 | 3_3:-82093726 | Msa0477750:CDS |
| GTGAGGGATTGAGAGTCCGA+CGG | 0.602706 | 3_3:+82091504 | None:intergenic |
| CAATTGCATTCATGAAGTAG+TGG | 0.603523 | 3_3:-82093076 | Msa0477750:CDS |
| AATGGTGGAACTTTCATGAA+GGG | 0.603560 | 3_3:-82093711 | Msa0477750:CDS |
| CTTTGTGAAACAAATAGGGT+AGG | 0.603615 | 3_3:-82089944 | Msa0477750:three_prime_UTR |
| TGTGTTCCATACTCAGAAGA+CGG | 0.604040 | 3_3:-82097391 | Msa0477750:CDS |
| TTACTTATGTATTATCGGAG+AGG | 0.607601 | 3_3:-82090227 | Msa0477750:CDS |
| GCTTCACTCGACCTTCGCCA+TGG | 0.608681 | 3_3:-82097327 | Msa0477750:CDS |
| CAGAGCATTGATGGTAATGG+AGG | 0.610246 | 3_3:-82094194 | Msa0477750:CDS |
| TTGGAATGGTGCTTTGCTGA+AGG | 0.619847 | 3_3:-82094302 | Msa0477750:CDS |
| GGTCGGTAATAAGAAGAGAT+GGG | 0.622823 | 3_3:+82091803 | None:intergenic |
| TCATCCAGTGCATGATGATG+TGG | 0.623705 | 3_3:+82093414 | None:intergenic |
| GAATAACTCGAGCAACGGTG+TGG | 0.623885 | 3_3:+82093280 | None:intergenic |
| AATAACTCGAGCAACGGTGT+GGG | 0.627835 | 3_3:+82093281 | None:intergenic |
| GTCCAGATGAATCCTTGATG+AGG | 0.628352 | 3_3:+82094551 | None:intergenic |
| AAGGATGTTAATGATTGGAA+TGG | 0.628565 | 3_3:-82094316 | Msa0477750:CDS |
| AAATATACCTGAGAAATGAT+CGG | 0.629270 | 3_3:+82091437 | None:intergenic |
| AGTTACAAGAAAATCAAATG+AGG | 0.629308 | 3_3:-82092980 | Msa0477750:intron |
| TAGCCATACAAATCTCTCCA+TGG | 0.631175 | 3_3:+82097310 | None:intergenic |
| TCTCTTCAGATCCATCGCCA+TGG | 0.638117 | 3_3:-82097975 | Msa0477750:exon |
| CTACTCCATAGGCAAAGACG+AGG | 0.640064 | 3_3:+82090361 | None:intergenic |
| GAACTACCTGTGGAAAAGGA+AGG | 0.640801 | 3_3:-82094085 | Msa0477750:CDS |
| CAGTGGAATAACTCGAGCAA+CGG | 0.643016 | 3_3:+82093275 | None:intergenic |
| AATGCAGCACCAAAAGCCAG+TGG | 0.643369 | 3_3:-82092335 | Msa0477750:CDS |
| AGAGCATGGAACTTACCTGA+CGG | 0.645707 | 3_3:-82096046 | Msa0477750:CDS |
| AGAAATTGTCTGGAGTAGAG+AGG | 0.650623 | 3_3:-82094143 | Msa0477750:CDS |
| TCTCAGTATACTTCCATCAG+AGG | 0.653634 | 3_3:+82096066 | None:intergenic |
| GCACCAACAGTATATTGGGA+AGG | 0.654684 | 3_3:-82097424 | Msa0477750:CDS |
| TTGGGCTTAACATTTATCAG+TGG | 0.657781 | 3_3:-82093443 | Msa0477750:CDS |
| GTAACAATAGACATCAACAA+TGG | 0.658123 | 3_3:-82094607 | Msa0477750:CDS |
| ATACCTTAAGCCATTCGAAG+AGG | 0.658715 | 3_3:+82094035 | None:intergenic |
| TCAGAACAGATAGATCTCAT+GGG | 0.661453 | 3_3:-82094219 | Msa0477750:CDS |
| AACAACGTCAGAACTACCTG+TGG | 0.662479 | 3_3:-82094095 | Msa0477750:CDS |
| TCACTTCTATTAGTTCAACA+AGG | 0.662525 | 3_3:-82094166 | Msa0477750:CDS |
| TCTAATGATCGCAAGCGCTG+AGG | 0.665196 | 3_3:-82093664 | Msa0477750:CDS |
| TGCAGCACCAAAAGCCAGTG+GGG | 0.666440 | 3_3:-82092333 | Msa0477750:CDS |
| AATCGGAACAGCAACACCAG+AGG | 0.670400 | 3_3:-82092309 | Msa0477750:CDS |
| ATTGTCTGGAGTAGAGAGGA+CGG | 0.670770 | 3_3:-82094139 | Msa0477750:CDS |
| TTGGTAATAGACCATCAAAG+AGG | 0.671484 | 3_3:-82094274 | Msa0477750:CDS |
| CGTTGTTACATCAATAACTG+AGG | 0.681812 | 3_3:+82094111 | None:intergenic |
| TGAAGTGAATGCAAAGAGCG+GGG | 0.683707 | 3_3:-82094737 | Msa0477750:CDS |
| TTGCATCGCATGACCCACCA+CGG | 0.684916 | 3_3:-82092239 | Msa0477750:CDS |
| GTTGCTTATAGTACTTACAA+GGG | 0.685667 | 3_3:-82093562 | Msa0477750:CDS |
| ACACGTTTACAACCATGAGG+TGG | 0.686512 | 3_3:-82089878 | Msa0477750:three_prime_UTR |
| TCAGCTTCGATCTTCCTCCG+TGG | 0.686685 | 3_3:-82098041 | Msa0477750:five_prime_UTR |
| TAGACGGTGAAGTTCTCTGG+AGG | 0.686865 | 3_3:-82094953 | Msa0477750:CDS |
| ACATGAGATGTCAGTCATCG+AGG | 0.688383 | 3_3:-82092059 | Msa0477750:CDS |
| GGTCTATGACCAGTCTCGGG+CGG | 0.695398 | 3_3:-82092038 | Msa0477750:intron |
| TATGAAGTGAATGCAAAGAG+CGG | 0.702657 | 3_3:-82094739 | Msa0477750:CDS |
| TACTCCATAGGCAAAGACGA+GGG | 0.709340 | 3_3:+82090362 | None:intergenic |
| GTTACACGTTTACAACCATG+AGG | 0.723303 | 3_3:-82089881 | Msa0477750:three_prime_UTR |
| TATACTTGTACATGACATCG+TGG | 0.726568 | 3_3:+82092384 | None:intergenic |
| GAGGGATTGAGAGTCCGACG+GGG | 0.735305 | 3_3:+82091506 | None:intergenic |
| TGTTCCATACTCAGAAGACG+GGG | 0.735564 | 3_3:-82097389 | Msa0477750:CDS |
| CTAAAAGTAGAAGGTCTGCG+AGG | 0.753852 | 3_3:-82090420 | Msa0477750:CDS |
| GTAATCTTCGAGTTCCACGG+AGG | 0.767367 | 3_3:+82098027 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACTTAC+TGG | + | chr3_3:82091984-82092003 | None:intergenic | 10.0% |
| !!! | ATTTTTAAGAGTATTATAAA+AGG | - | chr3_3:82092450-82092469 | Msa0477750:intron | 10.0% |
| !!! | ATTTTATTGAAATTTTTCAT+TGG | - | chr3_3:82092687-82092706 | Msa0477750:intron | 10.0% |
| !! | TAAGATATAAAAAAAATCAA+TGG | + | chr3_3:82093092-82093111 | None:intergenic | 10.0% |
| !!! | ACTAATATTTTTAAAACATA+AGG | + | chr3_3:82095065-82095084 | None:intergenic | 10.0% |
| !!! | TTTTTGCTTATATTAAATTA+AGG | + | chr3_3:82096545-82096564 | None:intergenic | 10.0% |
| !!! | TTATTCATAATTTTTTTCAA+AGG | - | chr3_3:82096993-82097012 | Msa0477750:intron | 10.0% |
| !!! | TTTATTTTTGGATGAAAATT+AGG | + | chr3_3:82089854-82089873 | None:intergenic | 15.0% |
| !!! | AGTGTTTGTTTATTTATTTT+TGG | + | chr3_3:82089866-82089885 | None:intergenic | 15.0% |
| !! | ATAAAATCAATGAAAATAGA+TGG | + | chr3_3:82090169-82090188 | None:intergenic | 15.0% |
| !! | AATTTCTCTTATATTTAGTT+CGG | + | chr3_3:82090713-82090732 | None:intergenic | 15.0% |
| !! | AACTAAATATAAGAGAAATT+TGG | - | chr3_3:82090713-82090732 | Msa0477750:intron | 15.0% |
| !! | ACTAAATATAAGAGAAATTT+GGG | - | chr3_3:82090714-82090733 | Msa0477750:intron | 15.0% |
| !! | ATAAAAAATATATCGACATT+GGG | - | chr3_3:82091156-82091175 | Msa0477750:intron | 15.0% |
| !!! | CTTTTGAAAATATATTTGTT+TGG | - | chr3_3:82091271-82091290 | Msa0477750:intron | 15.0% |
| !!! | CACATATATTTGTTATATTT+TGG | + | chr3_3:82091338-82091357 | None:intergenic | 15.0% |
| !! | TATGTATATAACAAAAGATA+TGG | + | chr3_3:82092021-82092040 | None:intergenic | 15.0% |
| !! | TTAATTAAAGTTACAAATGA+AGG | - | chr3_3:82093480-82093499 | Msa0477750:CDS | 15.0% |
| !!! | TTAGAATTATGATTTTTATG+TGG | - | chr3_3:82094189-82094208 | Msa0477750:CDS | 15.0% |
| !! | AAGAGAATAATAATTTAGAA+AGG | + | chr3_3:82095494-82095513 | None:intergenic | 15.0% |
| !! | TTTATTCTTTAGATATTTAG+CGG | - | chr3_3:82096763-82096782 | Msa0477750:intron | 15.0% |
| !!! | ATTTGTTACTTATGTATTAT+CGG | - | chr3_3:82097711-82097730 | Msa0477750:intron | 15.0% |
| !! | ATAATTAACAAATGGAATTG+TGG | + | chr3_3:82090116-82090135 | None:intergenic | 20.0% |
| !!! | TTCAATCTGTTTTTATGATT+TGG | - | chr3_3:82090425-82090444 | Msa0477750:CDS | 20.0% |
| !! | CCTAAATATAACAGAAATTT+GGG | + | chr3_3:82090769-82090788 | None:intergenic | 20.0% |
| !! | TCCTAAATATAACAGAAATT+TGG | + | chr3_3:82090770-82090789 | None:intergenic | 20.0% |
| !! | CATAAAAAATATATCGACAT+TGG | - | chr3_3:82091155-82091174 | Msa0477750:intron | 20.0% |
| !! | TATCAAAAAAGGAATAGAAA+AGG | + | chr3_3:82091222-82091241 | None:intergenic | 20.0% |
| !! | GAAACAATAACTGATATAAA+AGG | - | chr3_3:82092095-82092114 | Msa0477750:CDS | 20.0% |
| !! | TCATCTTAATGCATATATTA+AGG | + | chr3_3:82092261-82092280 | None:intergenic | 20.0% |
| !!! | TTAAGAGTATTATAAAAGGA+TGG | - | chr3_3:82092454-82092473 | Msa0477750:intron | 20.0% |
| !! | TCAATAAAATAAAGACCTTA+AGG | + | chr3_3:82092677-82092696 | None:intergenic | 20.0% |
| !! | AAATACAACAAAATAAACCA+AGG | + | chr3_3:82092855-82092874 | None:intergenic | 20.0% |
| !! | TAAAAACTGCAATTAATTAC+AGG | + | chr3_3:82092887-82092906 | None:intergenic | 20.0% |
| !! | TTGCTTAAGAAAAAAATATC+AGG | + | chr3_3:82093062-82093081 | None:intergenic | 20.0% |
| !! | AACTTTAATTAAGAGAACTT+GGG | + | chr3_3:82093472-82093491 | None:intergenic | 20.0% |
| !! | TAACTTTAATTAAGAGAACT+TGG | + | chr3_3:82093473-82093492 | None:intergenic | 20.0% |
| !!! | AAATTAAGTTTTTAGTCTTG+AGG | - | chr3_3:82095213-82095232 | Msa0477750:intron | 20.0% |
| !! | GAATAATAATTTAGAAAGGA+AGG | + | chr3_3:82095490-82095509 | None:intergenic | 20.0% |
| !! | TAAGATGTATTATATGAATC+TGG | - | chr3_3:82095777-82095796 | Msa0477750:intron | 20.0% |
| !!! | AATTTCTTTTGAGATAATGA+AGG | + | chr3_3:82096573-82096592 | None:intergenic | 20.0% |
| !! | AATAAATATGAAATTGCTTC+TGG | - | chr3_3:82096649-82096668 | Msa0477750:intron | 20.0% |
| !! | GCTAAATATCTAAAGAATAA+AGG | + | chr3_3:82096764-82096783 | None:intergenic | 20.0% |
| !!! | AGTAATAGTTCAGTTTTTTT+TGG | + | chr3_3:82096885-82096904 | None:intergenic | 20.0% |
| !!! | TAAGTTTTGAACTATTAAGT+AGG | - | chr3_3:82097796-82097815 | Msa0477750:intron | 20.0% |
| !! | GATATTAATGTTGTATATTG+AGG | - | chr3_3:82097938-82097957 | Msa0477750:CDS | 20.0% |
| !! | ATTTAACTGAAGAAAATGAT+TGG | + | chr3_3:82098112-82098131 | None:intergenic | 20.0% |
| !! | TTTTGGATGAAAATTAGGTT+TGG | + | chr3_3:82089849-82089868 | None:intergenic | 25.0% |
| ! | ACAAGGGAATAATTAACAAA+TGG | + | chr3_3:82090124-82090143 | None:intergenic | 25.0% |
| ! | AAATCAATGAAAATAGATGG+AGG | + | chr3_3:82090166-82090185 | None:intergenic | 25.0% |
| !! | TGAGGATAATCAATTTTACA+CGG | - | chr3_3:82090276-82090295 | Msa0477750:CDS | 25.0% |
| ! | GATTTGGAAGTTATAATTGA+TGG | - | chr3_3:82090441-82090460 | Msa0477750:CDS | 25.0% |
| ! | TGATTGTGTATATTACTAAC+TGG | - | chr3_3:82090468-82090487 | Msa0477750:intron | 25.0% |
| !! | CTAACTGGTTAATATGTTTT+TGG | - | chr3_3:82090483-82090502 | Msa0477750:intron | 25.0% |
| !! | ATATAACAGAAATTTGGGTT+TGG | + | chr3_3:82090764-82090783 | None:intergenic | 25.0% |
| ! | CCCAAATTTCTGTTATATTT+AGG | - | chr3_3:82090766-82090785 | Msa0477750:intron | 25.0% |
| !!! | TAATAGTCTTGAATCGTTTT+CGG | - | chr3_3:82090851-82090870 | Msa0477750:intron | 25.0% |
| !!! | GTTGTTTGTTTTCTTTTGTT+TGG | - | chr3_3:82090920-82090939 | Msa0477750:intron | 25.0% |
| ! | AAAAGATACCAAACAGAAAA+AGG | + | chr3_3:82091060-82091079 | None:intergenic | 25.0% |
| ! | ACTAAACTGAGTATCAAAAA+AGG | + | chr3_3:82091233-82091252 | None:intergenic | 25.0% |
| ! | TATTGTCCAAAAATCTCATT+TGG | - | chr3_3:82091591-82091610 | Msa0477750:intron | 25.0% |
| ! | ATATACATATGAATGTGATG+TGG | - | chr3_3:82092032-82092051 | Msa0477750:intron | 25.0% |
| ! | AAAGTAAGAAGATTACGAAA+AGG | - | chr3_3:82092068-82092087 | Msa0477750:CDS | 25.0% |
| ! | TCTTAATGCATATATTAAGG+AGG | + | chr3_3:82092258-82092277 | None:intergenic | 25.0% |
| ! | CAAAATGACTCTCTTAAATA+AGG | + | chr3_3:82092396-82092415 | None:intergenic | 25.0% |
| !!! | GATGATTTGATACTTGTTTT+TGG | - | chr3_3:82092938-82092957 | Msa0477750:intron | 25.0% |
| !!! | TTGATACTTGTTTTTGGTAA+AGG | - | chr3_3:82092944-82092963 | Msa0477750:intron | 25.0% |
| !!! | TGATACTTGTTTTTGGTAAA+GGG | - | chr3_3:82092945-82092964 | Msa0477750:intron | 25.0% |
| ! | ATTGTCTTCATATTGAACAA+AGG | + | chr3_3:82093589-82093608 | None:intergenic | 25.0% |
| ! | GATCATATAATTATGTTGTG+TGG | + | chr3_3:82094048-82094067 | None:intergenic | 25.0% |
| ! | AAATAGCTATTCAAAAGCTT+AGG | - | chr3_3:82094305-82094324 | Msa0477750:CDS | 25.0% |
| ! | TCAAGAAAAGAAATAACAGT+TGG | + | chr3_3:82094604-82094623 | None:intergenic | 25.0% |
| !! | GTGAGTTTTCAAATATATAC+TGG | - | chr3_3:82094794-82094813 | Msa0477750:CDS | 25.0% |
| ! | TTCAAATATATACTGGTACT+CGG | - | chr3_3:82094801-82094820 | Msa0477750:CDS | 25.0% |
| ! | AGTTACAAGAAAATCAAATG+AGG | - | chr3_3:82094963-82094982 | Msa0477750:CDS | 25.0% |
| ! | ATTAAAAACCTCAAAACCAA+AGG | + | chr3_3:82094996-82095015 | None:intergenic | 25.0% |
| !!! | AAAGAAAAGTATTTCGAGTA+AGG | + | chr3_3:82095113-82095132 | None:intergenic | 25.0% |
| ! | ATATACAATTCAAACGACTT+CGG | + | chr3_3:82095344-82095363 | None:intergenic | 25.0% |
| !!! | TATTCTCTTTTGTTTCATCT+AGG | - | chr3_3:82095505-82095524 | Msa0477750:intron | 25.0% |
| ! | AATACATCTTAAGAATGAGA+AGG | + | chr3_3:82095768-82095787 | None:intergenic | 25.0% |
| ! | TCAAATAACAATACACAAGT+TGG | + | chr3_3:82095939-82095958 | None:intergenic | 25.0% |
| ! | GTTCATTCTAATGTGATATA+TGG | - | chr3_3:82096048-82096067 | Msa0477750:CDS | 25.0% |
| !! | ATATTTGGAAGTTTGTTCTT+GGG | - | chr3_3:82096099-82096118 | Msa0477750:intron | 25.0% |
| !!! | CTGTTGTTTTCTCATTTAAT+TGG | - | chr3_3:82096340-82096359 | Msa0477750:intron | 25.0% |
| ! | AAATATACCTGAGAAATGAT+CGG | + | chr3_3:82096509-82096528 | None:intergenic | 25.0% |
| !!! | GAAATTTGTTGAGTCTTTAA+AGG | - | chr3_3:82096587-82096606 | Msa0477750:intron | 25.0% |
| ! | AAAGAATTATCTACTGATGA+AGG | - | chr3_3:82096731-82096750 | Msa0477750:intron | 25.0% |
| ! | AAGAATTATCTACTGATGAA+GGG | - | chr3_3:82096732-82096751 | Msa0477750:intron | 25.0% |
| ! | ATTCATTACTGTCTAACATA+TGG | + | chr3_3:82097221-82097240 | None:intergenic | 25.0% |
| ! | CTAGTAATTGGAAAATGATA+AGG | - | chr3_3:82097278-82097297 | Msa0477750:intron | 25.0% |
| !! | ATAAACATTTGAAACCAACT+TGG | - | chr3_3:82097411-82097430 | Msa0477750:CDS | 25.0% |
| ! | AAAAAATAGATCTACTCCAT+AGG | + | chr3_3:82097596-82097615 | None:intergenic | 25.0% |
| ! | GAAAATAGATGGAGGTTTTA+AGG | + | chr3_3:82090158-82090177 | None:intergenic | 30.0% |
| AAACCTTAACTGATGTTGAT+CGG | - | chr3_3:82090239-82090258 | Msa0477750:CDS | 30.0% | |
| !!! | TCGGTTTTTTTAAATCGTTG+AGG | - | chr3_3:82090258-82090277 | Msa0477750:CDS | 30.0% |
| !! | AGATGAGATTGATTTGTTGA+TGG | + | chr3_3:82090367-82090386 | None:intergenic | 30.0% |
| GAAAACGATTCAAGACTATT+AGG | + | chr3_3:82090852-82090871 | None:intergenic | 30.0% | |
| ! | AGACATCATACATTTTCCAA+GGG | + | chr3_3:82091035-82091054 | None:intergenic | 30.0% |
| ! | TAGACATCATACATTTTCCA+AGG | + | chr3_3:82091036-82091055 | None:intergenic | 30.0% |
| ! | ATGTCTAACCTTTTTCTGTT+TGG | - | chr3_3:82091049-82091068 | Msa0477750:intron | 30.0% |
| ! | GGATGTGACATTAATTTTCA+GGG | - | chr3_3:82091177-82091196 | Msa0477750:intron | 30.0% |
| ! | AGATAGCCAAATGAGATTTT+TGG | + | chr3_3:82091600-82091619 | None:intergenic | 30.0% |
| TGCTCTCTTTAATACTTTGT+TGG | - | chr3_3:82091753-82091772 | Msa0477750:CDS | 30.0% | |
| CAAAAGATATGGTACTTAGA+AGG | + | chr3_3:82092010-82092029 | None:intergenic | 30.0% | |
| TTATGTTCGAGAGAATTAGA+AGG | + | chr3_3:82092225-82092244 | None:intergenic | 30.0% | |
| ATGACTCTCTTAAATAAGGT+GGG | + | chr3_3:82092392-82092411 | None:intergenic | 30.0% | |
| AATGACTCTCTTAAATAAGG+TGG | + | chr3_3:82092393-82092412 | None:intergenic | 30.0% | |
| ATACCAAATCCCCATAATAT+GGG | + | chr3_3:82092539-82092558 | None:intergenic | 30.0% | |
| AATACCAAATCCCCATAATA+TGG | + | chr3_3:82092540-82092559 | None:intergenic | 30.0% | |
| !! | AACCAACCCATTTTCTAAAA+TGG | - | chr3_3:82092724-82092743 | Msa0477750:intron | 30.0% |
| !!! | ACCAACCCATTTTCTAAAAT+GGG | - | chr3_3:82092725-82092744 | Msa0477750:intron | 30.0% |
| !! | GTTAGCCCATTTTAGAAAAT+GGG | + | chr3_3:82092733-82092752 | None:intergenic | 30.0% |
| TGCAATTAATTACAGGTGTA+CGG | + | chr3_3:82092880-82092899 | None:intergenic | 30.0% | |
| GAAAAATTTGAAAGCTGACA+AGG | - | chr3_3:82092916-82092935 | Msa0477750:intron | 30.0% | |
| !!! | ATTTATGTAGCTGGTTTTGT+TGG | - | chr3_3:82093162-82093181 | Msa0477750:CDS | 30.0% |
| GTAACAATAGACATCAACAA+TGG | - | chr3_3:82093336-82093355 | Msa0477750:CDS | 30.0% | |
| ! | ATTTTTAATGCAAACAGTCC+TGG | + | chr3_3:82093444-82093463 | None:intergenic | 30.0% |
| TAAAATTCAGCTCTCTGTAA+AGG | - | chr3_3:82093608-82093627 | Msa0477750:CDS | 30.0% | |
| CTGTAAAGGATGTTAATGAT+TGG | - | chr3_3:82093622-82093641 | Msa0477750:CDS | 30.0% | |
| AAGGATGTTAATGATTGGAA+TGG | - | chr3_3:82093627-82093646 | Msa0477750:CDS | 30.0% | |
| TCTCAATATTTCCTCTTTGA+TGG | + | chr3_3:82093683-82093702 | None:intergenic | 30.0% | |
| TCACTTCTATTAGTTCAACA+AGG | - | chr3_3:82093777-82093796 | Msa0477750:intron | 30.0% | |
| GTCCTTGTTAAACATATCAA+GGG | + | chr3_3:82093935-82093954 | None:intergenic | 30.0% | |
| TGTCCTTGTTAAACATATCA+AGG | + | chr3_3:82093936-82093955 | None:intergenic | 30.0% | |
| ACTGTTAGTGTATGTTTATG+TGG | - | chr3_3:82094095-82094114 | Msa0477750:CDS | 30.0% | |
| ACATATAGAGATGTATCAAG+CGG | + | chr3_3:82094148-82094167 | None:intergenic | 30.0% | |
| AAAATGACTCGTGATCATAA+TGG | - | chr3_3:82094349-82094368 | Msa0477750:CDS | 30.0% | |
| AGTTGCTTATAGTACTTACA+AGG | - | chr3_3:82094380-82094399 | Msa0477750:CDS | 30.0% | |
| GTTGCTTATAGTACTTACAA+GGG | - | chr3_3:82094381-82094400 | Msa0477750:CDS | 30.0% | |
| AATCCATCTCTTCTTGTAAT+TGG | - | chr3_3:82094553-82094572 | Msa0477750:CDS | 30.0% | |
| ATCCATCTCTTCTTGTAATT+GGG | - | chr3_3:82094554-82094573 | Msa0477750:CDS | 30.0% | |
| TGTTCAGTTGAATCAGTATA+AGG | + | chr3_3:82094694-82094713 | None:intergenic | 30.0% | |
| ! | TAATCTTTTCTGATTCCGAT+GGG | + | chr3_3:82094936-82094955 | None:intergenic | 30.0% |
| ! | ATAATCTTTTCTGATTCCGA+TGG | + | chr3_3:82094937-82094956 | None:intergenic | 30.0% |
| CAAGAAAATCAAATGAGGTA+TGG | - | chr3_3:82094968-82094987 | Msa0477750:CDS | 30.0% | |
| CATGTTTATATACCTCAGAT+GGG | + | chr3_3:82095090-82095109 | None:intergenic | 30.0% | |
| !!! | TGATTTTTTTTCCGAGTAAG+AGG | - | chr3_3:82095236-82095255 | Msa0477750:intron | 30.0% |
| TATATCATTGATACTGTGAC+TGG | - | chr3_3:82095674-82095693 | Msa0477750:intron | 30.0% | |
| !! | CGCATGAATATTATTTCTGT+AGG | - | chr3_3:82095809-82095828 | Msa0477750:intron | 30.0% |
| TGTAGGTATTTAGTGAAAAC+TGG | - | chr3_3:82095826-82095845 | Msa0477750:intron | 30.0% | |
| GTAGGTATTTAGTGAAAACT+GGG | - | chr3_3:82095827-82095846 | Msa0477750:intron | 30.0% | |
| !!! | TCTACCACTATTTTAATCTC+AGG | - | chr3_3:82095853-82095872 | Msa0477750:intron | 30.0% |
| !!! | CTACCACTATTTTAATCTCA+GGG | - | chr3_3:82095854-82095873 | Msa0477750:intron | 30.0% |
| !!! | GCTGCTAATCTTTTTTTACA+TGG | - | chr3_3:82095985-82096004 | Msa0477750:CDS | 30.0% |
| ACAACACAAGAAATAATGAC+TGG | + | chr3_3:82096024-82096043 | None:intergenic | 30.0% | |
| ATTCTAATGTGATATATGGC+TGG | - | chr3_3:82096052-82096071 | Msa0477750:CDS | 30.0% | |
| CACAGGATAACAAAGATATT+TGG | - | chr3_3:82096084-82096103 | Msa0477750:CDS | 30.0% | |
| ! | GATATTTGGAAGTTTGTTCT+TGG | - | chr3_3:82096098-82096117 | Msa0477750:intron | 30.0% |
| ! | TTGATCTCAAGTTTTCATGT+GGG | + | chr3_3:82096310-82096329 | None:intergenic | 30.0% |
| ! | TTTGATCTCAAGTTTTCATG+TGG | + | chr3_3:82096311-82096330 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTTTGTTTGCTGC+AGG | - | chr3_3:82096385-82096404 | Msa0477750:intron | 30.0% |
| ! | ATATATTGCTGGCTATAACT+TGG | + | chr3_3:82096805-82096824 | None:intergenic | 30.0% |
| TAGCCAGCAATATATATCTA+AGG | - | chr3_3:82096810-82096829 | Msa0477750:intron | 30.0% | |
| AGCCAGCAATATATATCTAA+GGG | - | chr3_3:82096811-82096830 | Msa0477750:intron | 30.0% | |
| AGCAATATATATCTAAGGGT+GGG | - | chr3_3:82096815-82096834 | Msa0477750:intron | 30.0% | |
| AGGTATCACTAATAACAGTT+CGG | - | chr3_3:82097013-82097032 | Msa0477750:intron | 30.0% | |
| ATTTAGCAAACAGTTCAGTT+TGG | - | chr3_3:82097070-82097089 | Msa0477750:intron | 30.0% | |
| !! | TACTAGTTCTCATAATGGAT+AGG | + | chr3_3:82097264-82097283 | None:intergenic | 30.0% |
| ! | CCAATTACTAGTTCTCATAA+TGG | + | chr3_3:82097269-82097288 | None:intergenic | 30.0% |
| CCATTATGAGAACTAGTAAT+TGG | - | chr3_3:82097266-82097285 | Msa0477750:intron | 30.0% | |
| GTAATTGGAAAATGATAAGG+AGG | - | chr3_3:82097281-82097300 | Msa0477750:intron | 30.0% | |
| !! | TTTTAGGGAATGTGTGATAT+AGG | + | chr3_3:82097509-82097528 | None:intergenic | 30.0% |
| TTACTTATGTATTATCGGAG+AGG | - | chr3_3:82097716-82097735 | Msa0477750:intron | 30.0% | |
| TGTATATTGAGGATTGAGAT+AGG | - | chr3_3:82097949-82097968 | Msa0477750:CDS | 30.0% | |
| ! | AGTTGCTTTGTGAAACAAAT+AGG | - | chr3_3:82097994-82098013 | Msa0477750:five_prime_UTR | 30.0% |
| ! | GTTGCTTTGTGAAACAAATA+GGG | - | chr3_3:82097995-82098014 | Msa0477750:five_prime_UTR | 30.0% |
| GTGTAACTGCAATTAGAATA+AGG | + | chr3_3:82098049-82098068 | None:intergenic | 30.0% | |
| TAAACAAACACTTGCGTTCT+TGG | - | chr3_3:82089874-82089893 | Msa0477750:three_prime_UTR | 35.0% | |
| ! | ATTGTAATCTTCGAGTTCCA+CGG | + | chr3_3:82089922-82089941 | None:intergenic | 35.0% |
| ! | GATTGGTTAAAGAGAGGAAA+AGG | + | chr3_3:82090025-82090044 | None:intergenic | 35.0% |
| TCTCTTTACGAAGATCAAGT+TGG | - | chr3_3:82090053-82090072 | Msa0477750:three_prime_UTR | 35.0% | |
| TGGAATTGTGGTGTGAATAA+GGG | + | chr3_3:82090104-82090123 | None:intergenic | 35.0% | |
| ATGGAATTGTGGTGTGAATA+AGG | + | chr3_3:82090105-82090124 | None:intergenic | 35.0% | |
| TAAGGCGATGATTACAACAA+GGG | + | chr3_3:82090140-82090159 | None:intergenic | 35.0% | |
| TTAAGGCGATGATTACAACA+AGG | + | chr3_3:82090141-82090160 | None:intergenic | 35.0% | |
| AAACCGATCAACATCAGTTA+AGG | + | chr3_3:82090245-82090264 | None:intergenic | 35.0% | |
| !! | AGCCTTTTAATTATGCACCA+CGG | - | chr3_3:82090325-82090344 | Msa0477750:CDS | 35.0% |
| !!! | GTTGTTTTTGATACTGCCAT+AGG | - | chr3_3:82090794-82090813 | Msa0477750:intron | 35.0% |
| TTTGATACTGCCATAGGTTA+TGG | - | chr3_3:82090800-82090819 | Msa0477750:intron | 35.0% | |
| CAATGGTTATTGCTTGGAAA+AGG | + | chr3_3:82090888-82090907 | None:intergenic | 35.0% | |
| ! | CTTTTCCAAGCAATAACCAT+TGG | - | chr3_3:82090886-82090905 | Msa0477750:intron | 35.0% |
| AACAACCAATGGTTATTGCT+TGG | + | chr3_3:82090894-82090913 | None:intergenic | 35.0% | |
| ACAACTAAGCAAACAACCAA+TGG | + | chr3_3:82090905-82090924 | None:intergenic | 35.0% | |
| !! | TGTTTTTGTTGCTTGCAGTT+TGG | - | chr3_3:82090963-82090982 | Msa0477750:intron | 35.0% |
| AATCCCATCAACAACATCAT+TGG | + | chr3_3:82091005-82091024 | None:intergenic | 35.0% | |
| ! | GGGATGTGACATTAATTTTC+AGG | - | chr3_3:82091176-82091195 | Msa0477750:intron | 35.0% |
| AAAGGAATAGAAAAGGATCG+TGG | + | chr3_3:82091215-82091234 | None:intergenic | 35.0% | |
| ACAGGAAGACTGTATTTATG+AGG | + | chr3_3:82091369-82091388 | None:intergenic | 35.0% | |
| AGGTTGCAAATGAAGATGTT+GGG | - | chr3_3:82091419-82091438 | Msa0477750:intron | 35.0% | |
| ! | GGGTTGTAGATCTAAAACTT+TGG | - | chr3_3:82091440-82091459 | Msa0477750:intron | 35.0% |
| TATACTTCCATCAGAGGAAA+GGG | + | chr3_3:82091874-82091893 | None:intergenic | 35.0% | |
| GATGAATGCCAAAGCAAATA+AGG | - | chr3_3:82092276-82092295 | Msa0477750:CDS | 35.0% | |
| AGCAAAGTCACCCATAATAT+GGG | + | chr3_3:82092315-82092334 | None:intergenic | 35.0% | |
| TAGCAAAGTCACCCATAATA+TGG | + | chr3_3:82092316-82092335 | None:intergenic | 35.0% | |
| TATTGCAGAAAGCTTTCTGA+GGG | + | chr3_3:82092505-82092524 | None:intergenic | 35.0% | |
| ATATTGCAGAAAGCTTTCTG+AGG | + | chr3_3:82092506-82092525 | None:intergenic | 35.0% | |
| AAATAAACCCCCATTCAAGT+TGG | - | chr3_3:82092568-82092587 | Msa0477750:intron | 35.0% | |
| ! | AATAAACCCCCATTCAAGTT+GGG | - | chr3_3:82092569-82092588 | Msa0477750:intron | 35.0% |
| AAAGGGAAAAGAGAAAGAGA+AGG | + | chr3_3:82092602-82092621 | None:intergenic | 35.0% | |
| !! | GGTTAGCCCATTTTAGAAAA+TGG | + | chr3_3:82092734-82092753 | None:intergenic | 35.0% |
| ! | AGTGAGAGGTATGACAAATT+TGG | - | chr3_3:82093025-82093044 | Msa0477750:CDS | 35.0% |
| ! | GTGAGAGGTATGACAAATTT+GGG | - | chr3_3:82093026-82093045 | Msa0477750:CDS | 35.0% |
| ! | TGAGAGGTATGACAAATTTG+GGG | - | chr3_3:82093027-82093046 | Msa0477750:CDS | 35.0% |
| CATCAGGAGACTGTATAATA+TGG | + | chr3_3:82093140-82093159 | None:intergenic | 35.0% | |
| TATGAAGTGAATGCAAAGAG+CGG | - | chr3_3:82093204-82093223 | Msa0477750:CDS | 35.0% | |
| ATATTACCATCAAAGCTTCC+AGG | - | chr3_3:82093423-82093442 | Msa0477750:CDS | 35.0% | |
| AGTTACAAATGAAGGTGAGT+TGG | - | chr3_3:82093488-82093507 | Msa0477750:CDS | 35.0% | |
| !! | AATTGACAGAGCATTGCTAA+AGG | + | chr3_3:82093544-82093563 | None:intergenic | 35.0% |
| ! | TTGGTAATAGACCATCAAAG+AGG | - | chr3_3:82093669-82093688 | Msa0477750:CDS | 35.0% |
| TCAGAACAGATAGATCTCAT+GGG | - | chr3_3:82093724-82093743 | Msa0477750:CDS | 35.0% | |
| TTCAACAAGGAGAAATTGTC+TGG | - | chr3_3:82093790-82093809 | Msa0477750:intron | 35.0% | |
| CGTTGTTACATCAATAACTG+AGG | + | chr3_3:82093835-82093854 | None:intergenic | 35.0% | |
| TGCCCTTGATATGTTTAACA+AGG | - | chr3_3:82093930-82093949 | Msa0477750:intron | 35.0% | |
| ATCATTAACTGCTGCTCTAA+TGG | - | chr3_3:82094214-82094233 | Msa0477750:CDS | 35.0% | |
| ! | TAATGGTGGAACTTTCATGA+AGG | - | chr3_3:82094231-82094250 | Msa0477750:CDS | 35.0% |
| ! | AATGGTGGAACTTTCATGAA+GGG | - | chr3_3:82094232-82094251 | Msa0477750:CDS | 35.0% |
| ! | CTATTCAAAAGCTTAGGTTG+AGG | - | chr3_3:82094311-82094330 | Msa0477750:CDS | 35.0% |
| ! | AAGGTTTTTGCTTTGCATAC+CGG | - | chr3_3:82094409-82094428 | Msa0477750:CDS | 35.0% |
| TCATACTTTGCGTAAATCAG+AGG | - | chr3_3:82094462-82094481 | Msa0477750:CDS | 35.0% | |
| TGATAAATGTTAAGCCCAAC+TGG | + | chr3_3:82094499-82094518 | None:intergenic | 35.0% | |
| TTGGGCTTAACATTTATCAG+TGG | - | chr3_3:82094500-82094519 | Msa0477750:CDS | 35.0% | |
| ! | TCTTTTCTTGATGCATACAC+AGG | - | chr3_3:82094613-82094632 | Msa0477750:CDS | 35.0% |
| ! | CTTTTCTTGATGCATACACA+GGG | - | chr3_3:82094614-82094633 | Msa0477750:CDS | 35.0% |
| TTCAGAATCTCAATAGCTTC+AGG | + | chr3_3:82094772-82094791 | None:intergenic | 35.0% | |
| CAATTGCATTCATGAAGTAG+TGG | - | chr3_3:82094867-82094886 | Msa0477750:intron | 35.0% | |
| ATGAATACTGCTTCGTATTC+AGG | - | chr3_3:82094890-82094909 | Msa0477750:intron | 35.0% | |
| TGAATACTGCTTCGTATTCA+GGG | - | chr3_3:82094891-82094910 | Msa0477750:intron | 35.0% | |
| ATGGTCAATTGTATTCCCAT+CGG | - | chr3_3:82094918-82094937 | Msa0477750:intron | 35.0% | |
| ! | AAATATTAGTCTCCCATCTG+AGG | - | chr3_3:82095075-82095094 | Msa0477750:intron | 35.0% |
| GCATGTTTATATACCTCAGA+TGG | + | chr3_3:82095091-82095110 | None:intergenic | 35.0% | |
| CAATCAAATCACCTCTTACT+CGG | + | chr3_3:82095250-82095269 | None:intergenic | 35.0% | |
| ! | TTTGGGAGCATAACAAAACT+TGG | + | chr3_3:82095301-82095320 | None:intergenic | 35.0% |
| !! | AACTAAAGGCACACTGATTT+GGG | + | chr3_3:82095318-82095337 | None:intergenic | 35.0% |
| ! | AAACTAAAGGCACACTGATT+TGG | + | chr3_3:82095319-82095338 | None:intergenic | 35.0% |
| AACGACTTCGGAAAAACTAA+AGG | + | chr3_3:82095332-82095351 | None:intergenic | 35.0% | |
| ACTCTCTTTCATTGAGTCTT+TGG | - | chr3_3:82095450-82095469 | Msa0477750:intron | 35.0% | |
| TATACTTGTACATGACATCG+TGG | + | chr3_3:82095562-82095581 | None:intergenic | 35.0% | |
| ATGGCTGGAATATATTTCAC+AGG | - | chr3_3:82096067-82096086 | Msa0477750:CDS | 35.0% | |
| !!! | ATTTTGCTGAGATTTCTGGT+CGG | + | chr3_3:82096160-82096179 | None:intergenic | 35.0% |
| ! | TGTGATTTTGCTGAGATTTC+TGG | + | chr3_3:82096164-82096183 | None:intergenic | 35.0% |
| !! | TTTTTGTTTGCTGCAGGTTT+TGG | - | chr3_3:82096391-82096410 | Msa0477750:intron | 35.0% |
| ! | GGCACTTGATAAACGATTTT+TGG | - | chr3_3:82096412-82096431 | Msa0477750:intron | 35.0% |
| ATATGAAATTGCTTCTGGTC+AGG | - | chr3_3:82096654-82096673 | Msa0477750:intron | 35.0% | |
| TATGAAATTGCTTCTGGTCA+GGG | - | chr3_3:82096655-82096674 | Msa0477750:intron | 35.0% | |
| CACCCTTAGATATATATTGC+TGG | + | chr3_3:82096816-82096835 | None:intergenic | 35.0% | |
| CAGCAATATATATCTAAGGG+TGG | - | chr3_3:82096814-82096833 | Msa0477750:intron | 35.0% | |
| TAAAGTTCAGCAGTTCAGTT+CGG | + | chr3_3:82096857-82096876 | None:intergenic | 35.0% | |
| TGAACTGAAACAGTTCAGTT+CGG | - | chr3_3:82096919-82096938 | Msa0477750:intron | 35.0% | |
| TTGGAAAATGATAAGGAGGA+TGG | - | chr3_3:82097285-82097304 | Msa0477750:intron | 35.0% | |
| ACACATTCCCTAAAAGTAGA+AGG | - | chr3_3:82097514-82097533 | Msa0477750:intron | 35.0% | |
| GGAAAGATCTAGAAGAGAAA+TGG | - | chr3_3:82097737-82097756 | Msa0477750:intron | 35.0% | |
| AGATGATCTGTCTTCCATAT+CGG | - | chr3_3:82097760-82097779 | Msa0477750:intron | 35.0% | |
| CCTCAAACAAAGGAATGTAA+TGG | + | chr3_3:82097903-82097922 | None:intergenic | 35.0% | |
| ! | CCATTACATTCCTTTGTTTG+AGG | - | chr3_3:82097900-82097919 | Msa0477750:CDS | 35.0% |
| CTTTGTGAAACAAATAGGGT+AGG | - | chr3_3:82097999-82098018 | Msa0477750:five_prime_UTR | 35.0% | |
| AGAGTGAATGTGTGAGTGAT+GGG | + | chr3_3:82089946-82089965 | None:intergenic | 40.0% | |
| AAGAGTGAATGTGTGAGTGA+TGG | + | chr3_3:82089947-82089966 | None:intergenic | 40.0% | |
| ! | AAGCGAGATTGGTTAAAGAG+AGG | + | chr3_3:82090031-82090050 | None:intergenic | 40.0% |
| GTAAAGAGAAGAAGCGAGAT+TGG | + | chr3_3:82090042-82090061 | None:intergenic | 40.0% | |
| !! | ATCAAGTTGGTCTCATGGAT+TGG | - | chr3_3:82090066-82090085 | Msa0477750:three_prime_UTR | 40.0% |
| CACCGTGGTGCATAATTAAA+AGG | + | chr3_3:82090330-82090349 | None:intergenic | 40.0% | |
| ! | GTGTAAAACTTTTCACACCG+TGG | + | chr3_3:82090345-82090364 | None:intergenic | 40.0% |
| TCACCTTCCCAATATACTGT+TGG | + | chr3_3:82090525-82090544 | None:intergenic | 40.0% | |
| TGTGTTCCATACTCAGAAGA+CGG | - | chr3_3:82090552-82090571 | Msa0477750:intron | 40.0% | |
| AGCTACAACATTCTCTTCAG+TGG | + | chr3_3:82090599-82090618 | None:intergenic | 40.0% | |
| TAGCCATACAAATCTCTCCA+TGG | + | chr3_3:82090636-82090655 | None:intergenic | 40.0% | |
| CCATCATAAGCCATAACCTA+TGG | + | chr3_3:82090813-82090832 | None:intergenic | 40.0% | |
| CCATAGGTTATGGCTTATGA+TGG | - | chr3_3:82090810-82090829 | Msa0477750:intron | 40.0% | |
| !! | TTTTGTTGCTTGCAGTTTGG+AGG | - | chr3_3:82090966-82090985 | Msa0477750:intron | 40.0% |
| GCACCAATGATGTTGTTGAT+GGG | - | chr3_3:82090999-82091018 | Msa0477750:intron | 40.0% | |
| TCTGTTGCAATTCTCATACG+AGG | - | chr3_3:82091399-82091418 | Msa0477750:intron | 40.0% | |
| GAGGTTGCAAATGAAGATGT+TGG | - | chr3_3:82091418-82091437 | Msa0477750:intron | 40.0% | |
| GGTTGCAAATGAAGATGTTG+GGG | - | chr3_3:82091420-82091439 | Msa0477750:intron | 40.0% | |
| GGACAATAGACACTTGAAAG+TGG | + | chr3_3:82091579-82091598 | None:intergenic | 40.0% | |
| GTATACTTCCATCAGAGGAA+AGG | + | chr3_3:82091875-82091894 | None:intergenic | 40.0% | |
| TCTCAGTATACTTCCATCAG+AGG | + | chr3_3:82091880-82091899 | None:intergenic | 40.0% | |
| ! | ATGGAAGTATACTGAGAGCA+TGG | - | chr3_3:82091883-82091902 | Msa0477750:intron | 40.0% |
| TGATTCCTTTGATCCCTGAA+GGG | + | chr3_3:82091943-82091962 | None:intergenic | 40.0% | |
| TTGATTCCTTTGATCCCTGA+AGG | + | chr3_3:82091944-82091963 | None:intergenic | 40.0% | |
| ! | ATGTGTCCTTTTCACAGCTT+TGG | + | chr3_3:82092132-82092151 | None:intergenic | 40.0% |
| TACATAAAGTGAGCATCCTC+TGG | - | chr3_3:82092151-82092170 | Msa0477750:intron | 40.0% | |
| ! | TCATGGCACCTTATTTGCTT+TGG | + | chr3_3:82092287-82092306 | None:intergenic | 40.0% |
| CATGACTCGACCCATATTAT+GGG | - | chr3_3:82092302-82092321 | Msa0477750:CDS | 40.0% | |
| ! | TTATGGGTGACTTTGCTATG+TGG | - | chr3_3:82092318-82092337 | Msa0477750:CDS | 40.0% |
| ! | TATGGGTGACTTTGCTATGT+GGG | - | chr3_3:82092319-82092338 | Msa0477750:CDS | 40.0% |
| TATCGAGCTCACCCATATTA+TGG | - | chr3_3:82092525-82092544 | Msa0477750:intron | 40.0% | |
| ATCGAGCTCACCCATATTAT+GGG | - | chr3_3:82092526-82092545 | Msa0477750:intron | 40.0% | |
| TCACCCATATTATGGGGATT+TGG | - | chr3_3:82092533-82092552 | Msa0477750:intron | 40.0% | |
| AATGTCTCCCAACTTGAATG+GGG | + | chr3_3:82092579-82092598 | None:intergenic | 40.0% | |
| GAATGTCTCCCAACTTGAAT+GGG | + | chr3_3:82092580-82092599 | None:intergenic | 40.0% | |
| !! | GCCCATTTTAGAAAATGGGT+TGG | + | chr3_3:82092729-82092748 | None:intergenic | 40.0% |
| TCAGTGCAGGTTCATAAAGA+TGG | + | chr3_3:82092813-82092832 | None:intergenic | 40.0% | |
| ! | GGAAAGATTTTGCTAGTGAG+AGG | - | chr3_3:82093011-82093030 | Msa0477750:CDS | 40.0% |
| ! | AGGTATGACAAATTTGGGGT+TGG | - | chr3_3:82093031-82093050 | Msa0477750:CDS | 40.0% |
| CCAGCTACATAAATCACATC+AGG | + | chr3_3:82093156-82093175 | None:intergenic | 40.0% | |
| CCTGATGTGATTTATGTAGC+TGG | - | chr3_3:82093153-82093172 | Msa0477750:CDS | 40.0% | |
| ATGAAGTGAATGCAAAGAGC+GGG | - | chr3_3:82093205-82093224 | Msa0477750:CDS | 40.0% | |
| AGTCTCAGGTGATAAGTTTG+TGG | - | chr3_3:82093287-82093306 | Msa0477750:CDS | 40.0% | |
| AGGTGATAAGTTTGTGGTGT+TGG | - | chr3_3:82093293-82093312 | Msa0477750:CDS | 40.0% | |
| ! | TTGTGGTGTTGGATGATGTA+AGG | - | chr3_3:82093304-82093323 | Msa0477750:CDS | 40.0% |
| ! | TACAAATGAAGGTGAGTTGG+TGG | - | chr3_3:82093491-82093510 | Msa0477750:CDS | 40.0% |
| CAATGCTCTGTCAATTTCAG+AGG | - | chr3_3:82093548-82093567 | Msa0477750:CDS | 40.0% | |
| TGCTTTGCTGAAGGAAAACT+TGG | - | chr3_3:82093650-82093669 | Msa0477750:CDS | 40.0% | |
| GTCAGAACAGATAGATCTCA+TGG | - | chr3_3:82093723-82093742 | Msa0477750:CDS | 40.0% | |
| !! | GTTCAGAGCATTGATGGTAA+TGG | - | chr3_3:82093746-82093765 | Msa0477750:CDS | 40.0% |
| ! | AGAAATTGTCTGGAGTAGAG+AGG | - | chr3_3:82093800-82093819 | Msa0477750:intron | 40.0% |
| TAGAACAGAACCTCTTCGAA+TGG | - | chr3_3:82093898-82093917 | Msa0477750:intron | 40.0% | |
| ATACCTTAAGCCATTCGAAG+AGG | + | chr3_3:82093911-82093930 | None:intergenic | 40.0% | |
| ATTAACTGCTGCTCTAATGG+TGG | - | chr3_3:82094217-82094236 | Msa0477750:CDS | 40.0% | |
| ! | GGACATTTGCTGAAACTCAA+AGG | - | chr3_3:82094253-82094272 | Msa0477750:CDS | 40.0% |
| CTTATAGTACTTACAAGGGC+AGG | - | chr3_3:82094385-82094404 | Msa0477750:CDS | 40.0% | |
| ! | AGGTTTTTGCTTTGCATACC+GGG | - | chr3_3:82094410-82094429 | Msa0477750:CDS | 40.0% |
| AGGATTGTGAACATCCAGTT+GGG | - | chr3_3:82094482-82094501 | Msa0477750:CDS | 40.0% | |
| GCTTAACATTTATCAGTGGC+AGG | - | chr3_3:82094504-82094523 | Msa0477750:CDS | 40.0% | |
| GTTGAATCAGTATAAGGCAG+TGG | + | chr3_3:82094688-82094707 | None:intergenic | 40.0% | |
| CAATAGCTTCAGGAGTTCTT+GGG | + | chr3_3:82094762-82094781 | None:intergenic | 40.0% | |
| TCAATAGCTTCAGGAGTTCT+TGG | + | chr3_3:82094763-82094782 | None:intergenic | 40.0% | |
| CGAGTAAGAGGTGATTTGAT+TGG | - | chr3_3:82095248-82095267 | Msa0477750:intron | 40.0% | |
| CAAAAGCTTACAGCATGAAC+AGG | + | chr3_3:82095740-82095759 | None:intergenic | 40.0% | |
| GAGCCCTGAGATTAAAATAG+TGG | + | chr3_3:82095860-82095879 | None:intergenic | 40.0% | |
| GGTCGGTAATAAGAAGAGAT+GGG | + | chr3_3:82096143-82096162 | None:intergenic | 40.0% | |
| TGGTCGGTAATAAGAAGAGA+TGG | + | chr3_3:82096144-82096163 | None:intergenic | 40.0% | |
| AGCAGTTGAAGTCACTTCAA+TGG | + | chr3_3:82096216-82096235 | None:intergenic | 40.0% | |
| TGAAGTGACTTCAACTGCTA+AGG | - | chr3_3:82096217-82096236 | Msa0477750:intron | 40.0% | |
| GAAGTGACTTCAACTGCTAA+GGG | - | chr3_3:82096218-82096237 | Msa0477750:intron | 40.0% | |
| ACCTCTAAGCAGCTTCTTAT+CGG | - | chr3_3:82096245-82096264 | Msa0477750:intron | 40.0% | |
| CAGCTTCTTATCGGAACAAT+TGG | - | chr3_3:82096254-82096273 | Msa0477750:intron | 40.0% | |
| ! | TATCGGAACAATTGGTGATC+AGG | - | chr3_3:82096262-82096281 | Msa0477750:intron | 40.0% |
| TCTTCTTTCTCAGCTTGTGA+GGG | + | chr3_3:82096458-82096477 | None:intergenic | 40.0% | |
| TTCTTCTTTCTCAGCTTGTG+AGG | + | chr3_3:82096459-82096478 | None:intergenic | 40.0% | |
| TCACAAGCTGAGAAAGAAGA+AGG | - | chr3_3:82096458-82096477 | Msa0477750:intron | 40.0% | |
| ATCGGTAGTGAATCAGTAAG+AGG | + | chr3_3:82096491-82096510 | None:intergenic | 40.0% | |
| TTCACTACCGATCATTTCTC+AGG | - | chr3_3:82096499-82096518 | Msa0477750:intron | 40.0% | |
| !!! | AGCAGTTCAGTTCGGTTTTT+TGG | + | chr3_3:82096849-82096868 | None:intergenic | 40.0% |
| CAGTTCGGTTCAAAACAGTT+CGG | - | chr3_3:82096934-82096953 | Msa0477750:CDS | 40.0% | |
| CAAAACAGTTCGGTTCAGTT+CGG | - | chr3_3:82096944-82096963 | Msa0477750:CDS | 40.0% | |
| ATCTCACACAACATGCATGT+GGG | + | chr3_3:82097122-82097141 | None:intergenic | 40.0% | |
| TATCTCACACAACATGCATG+TGG | + | chr3_3:82097123-82097142 | None:intergenic | 40.0% | |
| TAACATATGGCTAATCCCTC+TGG | + | chr3_3:82097208-82097227 | None:intergenic | 40.0% | |
| !!! | AGCCCTGTTTTTACTTGCTA+TGG | - | chr3_3:82097321-82097340 | Msa0477750:CDS | 40.0% |
| GGCCATAGCAAGTAAAAACA+GGG | + | chr3_3:82097326-82097345 | None:intergenic | 40.0% | |
| AGGCCATAGCAAGTAAAAAC+AGG | + | chr3_3:82097327-82097346 | None:intergenic | 40.0% | |
| GATCTACTCTAAACTGAGGA+AGG | + | chr3_3:82097365-82097384 | None:intergenic | 40.0% | |
| AGCAGATCTACTCTAAACTG+AGG | + | chr3_3:82097369-82097388 | None:intergenic | 40.0% | |
| AGATAAGCATGAGACCAAGT+TGG | + | chr3_3:82097428-82097447 | None:intergenic | 40.0% | |
| !! | TCGCAGACCTTCTACTTTTA+GGG | + | chr3_3:82097524-82097543 | None:intergenic | 40.0% |
| TTACTCAGATTGCTCCTTCT+AGG | - | chr3_3:82097614-82097633 | Msa0477750:intron | 40.0% | |
| AGTGAATCGTAAGTCCTAGA+AGG | + | chr3_3:82097631-82097650 | None:intergenic | 40.0% | |
| AAGAAATTACGCGTCCGATA+TGG | + | chr3_3:82097777-82097796 | None:intergenic | 40.0% | |
| ! | TTCCTTTGTTTGAGGCTGAA+TGG | - | chr3_3:82097908-82097927 | Msa0477750:CDS | 40.0% |
| ! | TTTGTTTGAGGCTGAATGGA+GGG | - | chr3_3:82097912-82097931 | Msa0477750:CDS | 40.0% |
| GTTACACGTTTACAACCATG+AGG | - | chr3_3:82098062-82098081 | Msa0477750:five_prime_UTR | 40.0% | |
| ! | TCTATTTTCTGTCCACCTCA+TGG | + | chr3_3:82098080-82098099 | None:intergenic | 40.0% |
| GAGAAAAACCCTAATCGCCA+TGG | + | chr3_3:82089994-82090013 | None:intergenic | 45.0% | |
| !! | CGAAGATCAAGTTGGTCTCA+TGG | - | chr3_3:82090061-82090080 | Msa0477750:three_prime_UTR | 45.0% |
| !!! | TGTTTTTGGCTGCCAATTGC+AGG | - | chr3_3:82090497-82090516 | Msa0477750:intron | 45.0% |
| ! | ATACTGTTGGTGCCTGCAAT+TGG | + | chr3_3:82090512-82090531 | None:intergenic | 45.0% |
| TGCAGGCACCAACAGTATAT+TGG | - | chr3_3:82090514-82090533 | Msa0477750:intron | 45.0% | |
| GCAGGCACCAACAGTATATT+GGG | - | chr3_3:82090515-82090534 | Msa0477750:intron | 45.0% | |
| GCACCAACAGTATATTGGGA+AGG | - | chr3_3:82090519-82090538 | Msa0477750:intron | 45.0% | |
| GTGTTCCATACTCAGAAGAC+GGG | - | chr3_3:82090553-82090572 | Msa0477750:intron | 45.0% | |
| TGTTCCATACTCAGAAGACG+GGG | - | chr3_3:82090554-82090573 | Msa0477750:intron | 45.0% | |
| TACAAATCTCTCCATGGCGA+AGG | + | chr3_3:82090630-82090649 | None:intergenic | 45.0% | |
| TCGCCATGGAGAGATTTGTA+TGG | - | chr3_3:82090630-82090649 | Msa0477750:intron | 45.0% | |
| GGCACCAATGATGTTGTTGA+TGG | - | chr3_3:82090998-82091017 | Msa0477750:intron | 45.0% | |
| GCAACAGAGAATGCAACAAC+AGG | + | chr3_3:82091387-82091406 | None:intergenic | 45.0% | |
| ACAATGAGACAACAATCGCG+AGG | + | chr3_3:82091646-82091665 | None:intergenic | 45.0% | |
| AGAGCATGGAACTTACCTGA+CGG | - | chr3_3:82091897-82091916 | Msa0477750:intron | 45.0% | |
| CATCCTCCAAAGCTGTGAAA+AGG | - | chr3_3:82092123-82092142 | Msa0477750:intron | 45.0% | |
| !! | TGTCCTTTTCACAGCTTTGG+AGG | + | chr3_3:82092129-82092148 | None:intergenic | 45.0% |
| AGTTCTGTTTGCATCTCCAG+AGG | + | chr3_3:82092170-82092189 | None:intergenic | 45.0% | |
| CCATAATATGGGTCGAGTCA+TGG | + | chr3_3:82092304-82092323 | None:intergenic | 45.0% | |
| CCATGACTCGACCCATATTA+TGG | - | chr3_3:82092301-82092320 | Msa0477750:CDS | 45.0% | |
| ! | TTTGCTATGTGGGCACTGTT+TGG | - | chr3_3:82092329-82092348 | Msa0477750:CDS | 45.0% |
| ! | TTGCTATGTGGGCACTGTTT+GGG | - | chr3_3:82092330-82092349 | Msa0477750:CDS | 45.0% |
| GCACTGTTTGGGAGTTTGTA+GGG | - | chr3_3:82092341-82092360 | Msa0477750:CDS | 45.0% | |
| CACTGTTTGGGAGTTTGTAG+GGG | - | chr3_3:82092342-82092361 | Msa0477750:CDS | 45.0% | |
| TCGAGCTCACCCATATTATG+GGG | - | chr3_3:82092527-82092546 | Msa0477750:intron | 45.0% | |
| ATGTCTCCCAACTTGAATGG+GGG | + | chr3_3:82092578-82092597 | None:intergenic | 45.0% | |
| GGAATGTCTCCCAACTTGAA+TGG | + | chr3_3:82092581-82092600 | None:intergenic | 45.0% | |
| TTGGGGGAAAGGAAAGGAAA+GGG | + | chr3_3:82092619-82092638 | None:intergenic | 45.0% | |
| TTTGGGGGAAAGGAAAGGAA+AGG | + | chr3_3:82092620-82092639 | None:intergenic | 45.0% | |
| CCATCAACCAGCCAATCAAA+GGG | + | chr3_3:82092763-82092782 | None:intergenic | 45.0% | |
| ACCATCAACCAGCCAATCAA+AGG | + | chr3_3:82092764-82092783 | None:intergenic | 45.0% | |
| !! | TTTGATTGGCTGGTTGATGG+TGG | - | chr3_3:82092763-82092782 | Msa0477750:intron | 45.0% |
| !! | TTGATTGGCTGGTTGATGGT+GGG | - | chr3_3:82092764-82092783 | Msa0477750:intron | 45.0% |
| !! | CATGCCATTTCTGGCATAGA+CGG | - | chr3_3:82092974-82092993 | Msa0477750:intron | 45.0% |
| TTCACCGTCTATGCCAGAAA+TGG | + | chr3_3:82092981-82093000 | None:intergenic | 45.0% | |
| TGAAGTGAATGCAAAGAGCG+GGG | - | chr3_3:82093206-82093225 | Msa0477750:CDS | 45.0% | |
| CACTTCCCTTTGCAACTTCT+GGG | - | chr3_3:82093253-82093272 | Msa0477750:CDS | 45.0% | |
| ACTTCCCTTTGCAACTTCTG+GGG | - | chr3_3:82093254-82093273 | Msa0477750:CDS | 45.0% | |
| GATTCCCCAGAAGTTGCAAA+GGG | + | chr3_3:82093261-82093280 | None:intergenic | 45.0% | |
| TGATTCCCCAGAAGTTGCAA+AGG | + | chr3_3:82093262-82093281 | None:intergenic | 45.0% | |
| GGGGAATCATTATCAGTCTC+AGG | - | chr3_3:82093273-82093292 | Msa0477750:CDS | 45.0% | |
| ! | TGAGGTCTGAAACTTGCTTC+TGG | + | chr3_3:82093377-82093396 | None:intergenic | 45.0% |
| GCAAGTTTCAGACCTCATCA+AGG | - | chr3_3:82093380-82093399 | Msa0477750:CDS | 45.0% | |
| GACCTCATCAAGGATTCATC+TGG | - | chr3_3:82093390-82093409 | Msa0477750:CDS | 45.0% | |
| GTCCAGATGAATCCTTGATG+AGG | + | chr3_3:82093395-82093414 | None:intergenic | 45.0% | |
| CATCAAGGATTCATCTGGAC+AGG | - | chr3_3:82093395-82093414 | Msa0477750:CDS | 45.0% | |
| ! | AACAGTCCTGGAAGCTTTGA+TGG | + | chr3_3:82093432-82093451 | None:intergenic | 45.0% |
| ! | AGGCTGCTGTATTGTCGATT+TGG | + | chr3_3:82093524-82093543 | None:intergenic | 45.0% |
| TTGGAATGGTGCTTTGCTGA+AGG | - | chr3_3:82093641-82093660 | Msa0477750:CDS | 45.0% | |
| !! | TCATGGGTTCAGAGCATTGA+TGG | - | chr3_3:82093740-82093759 | Msa0477750:CDS | 45.0% |
| !! | CAGAGCATTGATGGTAATGG+AGG | - | chr3_3:82093749-82093768 | Msa0477750:CDS | 45.0% |
| ! | ATTGTCTGGAGTAGAGAGGA+CGG | - | chr3_3:82093804-82093823 | Msa0477750:intron | 45.0% |
| AACAACGTCAGAACTACCTG+TGG | - | chr3_3:82093848-82093867 | Msa0477750:intron | 45.0% | |
| GTCAGAACTACCTGTGGAAA+AGG | - | chr3_3:82093854-82093873 | Msa0477750:intron | 45.0% | |
| GAACTACCTGTGGAAAAGGA+AGG | - | chr3_3:82093858-82093877 | Msa0477750:intron | 45.0% | |
| ! | GATACACCTTCCTTTTCCAC+AGG | + | chr3_3:82093867-82093886 | None:intergenic | 45.0% |
| GAACCTCTTCGAATGGCTTA+AGG | - | chr3_3:82093905-82093924 | Msa0477750:intron | 45.0% | |
| ! | TATCAAGCGGAAGTGTGAGA+GGG | + | chr3_3:82094135-82094154 | None:intergenic | 45.0% |
| AGTACTTACAAGGGCAGGAA+AGG | - | chr3_3:82094390-82094409 | Msa0477750:CDS | 45.0% | |
| ! | GGTTTTTGCTTTGCATACCG+GGG | - | chr3_3:82094411-82094430 | Msa0477750:CDS | 45.0% |
| GAGGATTGTGAACATCCAGT+TGG | - | chr3_3:82094481-82094500 | Msa0477750:CDS | 45.0% | |
| ! | TCATCCAGTGCATGATGATG+TGG | + | chr3_3:82094532-82094551 | None:intergenic | 45.0% |
| CGCCCAATTACAAGAAGAGA+TGG | + | chr3_3:82094559-82094578 | None:intergenic | 45.0% | |
| CTTCTTGTAATTGGGCGATG+TGG | - | chr3_3:82094562-82094581 | Msa0477750:CDS | 45.0% | |
| TCTTGATGCATACACAGGGA+AGG | - | chr3_3:82094618-82094637 | Msa0477750:CDS | 45.0% | |
| AATAACTCGAGCAACGGTGT+GGG | + | chr3_3:82094665-82094684 | None:intergenic | 45.0% | |
| CAGTGGAATAACTCGAGCAA+CGG | + | chr3_3:82094671-82094690 | None:intergenic | 45.0% | |
| GCTTCGTATTCAGGGACTTA+TGG | - | chr3_3:82094899-82094918 | Msa0477750:intron | 45.0% | |
| CAAATGAGGTATGGTGCCTT+TGG | - | chr3_3:82094977-82094996 | Msa0477750:CDS | 45.0% | |
| !!! | GTATGGTGCCTTTGGTTTTG+AGG | - | chr3_3:82094985-82095004 | Msa0477750:CDS | 45.0% |
| TCAACTCGACAGCTTGAGTT+GGG | - | chr3_3:82095153-82095172 | Msa0477750:intron | 45.0% | |
| ATAACCAAAGTTGCCTCCTC+TGG | + | chr3_3:82095653-82095672 | None:intergenic | 45.0% | |
| ACATGAGATGTCAGTCATCG+AGG | - | chr3_3:82095884-82095903 | Msa0477750:intron | 45.0% | |
| TCCGATAAGAAGCTGCTTAG+AGG | + | chr3_3:82096249-82096268 | None:intergenic | 45.0% | |
| ! | GGAACAATTGGTGATCAGGT+AGG | - | chr3_3:82096266-82096285 | Msa0477750:intron | 45.0% |
| !! | AACGATTTTTGGATCCCCGT+CGG | - | chr3_3:82096423-82096442 | Msa0477750:intron | 45.0% |
| !!! | ATGGGTTGGGGGACATATTT+TGG | - | chr3_3:82096703-82096722 | Msa0477750:intron | 45.0% |
| ATGTGGGCATGGTTCAGTTT+GGG | + | chr3_3:82097106-82097125 | None:intergenic | 45.0% | |
| ! | AACCCCCCATTCCTTTTTCT+CGG | - | chr3_3:82097167-82097186 | Msa0477750:intron | 45.0% |
| TTCCCCCGAGAAAAAGGAAT+GGG | + | chr3_3:82097175-82097194 | None:intergenic | 45.0% | |
| ATTCCCCCGAGAAAAAGGAA+TGG | + | chr3_3:82097176-82097195 | None:intergenic | 45.0% | |
| GAGAAATTCCCCCGAGAAAA+AGG | + | chr3_3:82097181-82097200 | None:intergenic | 45.0% | |
| GGGAATTTCTCTGTACCAGA+GGG | - | chr3_3:82097190-82097209 | Msa0477750:intron | 45.0% | |
| !! | CTCGCAGACCTTCTACTTTT+AGG | + | chr3_3:82097525-82097544 | None:intergenic | 45.0% |
| CTAAAAGTAGAAGGTCTGCG+AGG | - | chr3_3:82097523-82097542 | Msa0477750:intron | 45.0% | |
| AGTAACAGTGCCTGCCAAAT+TGG | - | chr3_3:82097549-82097568 | Msa0477750:intron | 45.0% | |
| GATGTAGACTCCAATTTGGC+AGG | + | chr3_3:82097562-82097581 | None:intergenic | 45.0% | |
| GAGGGATGTAGACTCCAATT+TGG | + | chr3_3:82097566-82097585 | None:intergenic | 45.0% | |
| TACTCCATAGGCAAAGACGA+GGG | + | chr3_3:82097584-82097603 | None:intergenic | 45.0% | |
| CTCCATTCAGCCTCAAACAA+AGG | + | chr3_3:82097913-82097932 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGAGGCTGAATGG+AGG | - | chr3_3:82097911-82097930 | Msa0477750:CDS | 45.0% |
| ! | TTGTTTGAGGCTGAATGGAG+GGG | - | chr3_3:82097913-82097932 | Msa0477750:CDS | 45.0% |
| GGAGAAACACGTACTTCAGA+AGG | - | chr3_3:82097970-82097989 | Msa0477750:exon | 45.0% | |
| ACACGTTTACAACCATGAGG+TGG | - | chr3_3:82098065-82098084 | Msa0477750:five_prime_UTR | 45.0% | |
| !! | AATATAATATAATAAGTTAA+AGG | - | chr3_3:82091670-82091689 | Msa0477750:intron | 5.0% |
| ! | GTAATCTTCGAGTTCCACGG+AGG | + | chr3_3:82089919-82089938 | None:intergenic | 50.0% |
| TCTCTTCAGATCCATCGCCA+TGG | - | chr3_3:82089968-82089987 | Msa0477750:three_prime_UTR | 50.0% | |
| ! | GCAGTTTGGAGGCATGTTCT+TGG | - | chr3_3:82090977-82090996 | Msa0477750:intron | 50.0% |
| GATGGGATTGACATTGCCCT+TGG | - | chr3_3:82091016-82091035 | Msa0477750:intron | 50.0% | |
| ACTTGAAAGTGGAGACGAGG+TGG | + | chr3_3:82091568-82091587 | None:intergenic | 50.0% | |
| GACACTTGAAAGTGGAGACG+AGG | + | chr3_3:82091571-82091590 | None:intergenic | 50.0% | |
| GTCATCACCCTTTCCTCTGA+TGG | - | chr3_3:82091864-82091883 | Msa0477750:intron | 50.0% | |
| GAGCATGGAACTTACCTGAC+GGG | - | chr3_3:82091898-82091917 | Msa0477750:intron | 50.0% | |
| GTTTGGGAGTCTTCCCTTCA+GGG | - | chr3_3:82091927-82091946 | Msa0477750:intron | 50.0% | |
| GTCTTCCCTTCAGGGATCAA+AGG | - | chr3_3:82091935-82091954 | Msa0477750:intron | 50.0% | |
| GGCACTGTTTGGGAGTTTGT+AGG | - | chr3_3:82092340-82092359 | Msa0477750:CDS | 50.0% | |
| TGTTTGGGAGTTTGTAGGGG+AGG | - | chr3_3:82092345-82092364 | Msa0477750:CDS | 50.0% | |
| GTTTGGGAGTTTGTAGGGGA+GGG | - | chr3_3:82092346-82092365 | Msa0477750:CDS | 50.0% | |
| ! | GGGTTTAGAACAGGAGGGAA+GGG | + | chr3_3:82092644-82092663 | None:intergenic | 50.0% |
| ! | CTTGGGGGTTTAGAACAGGA+GGG | + | chr3_3:82092649-82092668 | None:intergenic | 50.0% |
| ! | TCCTGTTCTAAACCCCCAAG+CGG | - | chr3_3:82092649-82092668 | Msa0477750:intron | 50.0% |
| AAGACCTTAAGGCTCCGCTT+GGG | + | chr3_3:82092666-82092685 | None:intergenic | 50.0% | |
| AAAGACCTTAAGGCTCCGCT+TGG | + | chr3_3:82092667-82092686 | None:intergenic | 50.0% | |
| TAACCTACCCGCCCTTTGAT+TGG | - | chr3_3:82092749-82092768 | Msa0477750:intron | 50.0% | |
| TCAACCAGCCAATCAAAGGG+CGG | + | chr3_3:82092760-82092779 | None:intergenic | 50.0% | |
| ! | CCCTTTGATTGGCTGGTTGA+TGG | - | chr3_3:82092760-82092779 | Msa0477750:intron | 50.0% |
| !! | TGATTGGCTGGTTGATGGTG+GGG | - | chr3_3:82092765-82092784 | Msa0477750:intron | 50.0% |
| AAGGCCAACTGCAGTAAAGG+GGG | + | chr3_3:82092836-82092855 | None:intergenic | 50.0% | |
| CAAGGCCAACTGCAGTAAAG+GGG | + | chr3_3:82092837-82092856 | None:intergenic | 50.0% | |
| CCAAGGCCAACTGCAGTAAA+GGG | + | chr3_3:82092838-82092857 | None:intergenic | 50.0% | |
| ACCAAGGCCAACTGCAGTAA+AGG | + | chr3_3:82092839-82092858 | None:intergenic | 50.0% | |
| ! | GGGTGTCTTCATGCCATTTC+TGG | - | chr3_3:82092965-82092984 | Msa0477750:intron | 50.0% |
| GCATAGACGGTGAAGTTCTC+TGG | - | chr3_3:82092987-82093006 | Msa0477750:CDS | 50.0% | |
| TAGACGGTGAAGTTCTCTGG+AGG | - | chr3_3:82092990-82093009 | Msa0477750:CDS | 50.0% | |
| GCACTTCCCTTTGCAACTTC+TGG | - | chr3_3:82093252-82093271 | Msa0477750:CDS | 50.0% | |
| ! | GTATCAAGCGGAAGTGTGAG+AGG | + | chr3_3:82094136-82094155 | None:intergenic | 50.0% |
| ! | TCTAATGATCGCAAGCGCTG+AGG | - | chr3_3:82094279-82094298 | Msa0477750:CDS | 50.0% |
| TTTGCTTTGCATACCGGGGA+TGG | - | chr3_3:82094415-82094434 | Msa0477750:CDS | 50.0% | |
| GGTTCCACATCATCATGCAC+TGG | - | chr3_3:82094525-82094544 | Msa0477750:CDS | 50.0% | |
| GAATAACTCGAGCAACGGTG+TGG | + | chr3_3:82094666-82094685 | None:intergenic | 50.0% | |
| CTCAACTCGACAGCTTGAGT+TGG | - | chr3_3:82095152-82095171 | Msa0477750:intron | 50.0% | |
| AATGCAGCACCAAAAGCCAG+TGG | - | chr3_3:82095608-82095627 | Msa0477750:intron | 50.0% | |
| ATGCAGCACCAAAAGCCAGT+GGG | - | chr3_3:82095609-82095628 | Msa0477750:intron | 50.0% | |
| CCAAAAGCCAGTGGGGAAAT+CGG | - | chr3_3:82095617-82095636 | Msa0477750:intron | 50.0% | |
| AATCGGAACAGCAACACCAG+AGG | - | chr3_3:82095634-82095653 | Msa0477750:intron | 50.0% | |
| AACACCAGAGGAGGCAACTT+TGG | - | chr3_3:82095646-82095665 | Msa0477750:intron | 50.0% | |
| TTACAGCATGAACAGGACCC+TGG | + | chr3_3:82095733-82095752 | None:intergenic | 50.0% | |
| TCGAGGTCTATGACCAGTCT+CGG | - | chr3_3:82095901-82095920 | Msa0477750:intron | 50.0% | |
| GAGACAGTGCGTTGAGAAGA+GGG | - | chr3_3:82096677-82096696 | Msa0477750:intron | 50.0% | |
| AGACAGTGCGTTGAGAAGAG+GGG | - | chr3_3:82096678-82096697 | Msa0477750:intron | 50.0% | |
| CATGTGGGCATGGTTCAGTT+TGG | + | chr3_3:82097107-82097126 | None:intergenic | 50.0% | |
| ACACAACATGCATGTGGGCA+TGG | + | chr3_3:82097117-82097136 | None:intergenic | 50.0% | |
| ! | ACCCCCCATTCCTTTTTCTC+GGG | - | chr3_3:82097168-82097187 | Msa0477750:intron | 50.0% |
| TCCCCCGAGAAAAAGGAATG+GGG | + | chr3_3:82097174-82097193 | None:intergenic | 50.0% | |
| GGGGAATTTCTCTGTACCAG+AGG | - | chr3_3:82097189-82097208 | Msa0477750:intron | 50.0% | |
| GAAGGACGATATGCAAGTGC+AGG | + | chr3_3:82097347-82097366 | None:intergenic | 50.0% | |
| ACATCCCTCGTCTTTGCCTA+TGG | - | chr3_3:82097577-82097596 | Msa0477750:intron | 50.0% | |
| CTACTCCATAGGCAAAGACG+AGG | + | chr3_3:82097585-82097604 | None:intergenic | 50.0% | |
| TCAGCTTCGATCTTCCTCCG+TGG | - | chr3_3:82089902-82089921 | Msa0477750:three_prime_UTR | 55.0% | |
| AACCCTAATCGCCATGGCCA+TGG | + | chr3_3:82089988-82090007 | None:intergenic | 55.0% | |
| TTCGCCCCGTCTTCTGAGTA+TGG | + | chr3_3:82090561-82090580 | None:intergenic | 55.0% | |
| GACGAGGTGGAGTGAATCTC+AGG | + | chr3_3:82091555-82091574 | None:intergenic | 55.0% | |
| ! | GAACTTACCTGACGGGCAGA+TGG | - | chr3_3:82091905-82091924 | Msa0477750:intron | 55.0% |
| ! | TACCTGACGGGCAGATGGTT+TGG | - | chr3_3:82091910-82091929 | Msa0477750:intron | 55.0% |
| ! | ACCTGACGGGCAGATGGTTT+GGG | - | chr3_3:82091911-82091930 | Msa0477750:intron | 55.0% |
| GGTTTGGGAGTCTTCCCTTC+AGG | - | chr3_3:82091926-82091945 | Msa0477750:intron | 55.0% | |
| !! | AGGGCTTTGGGGGAAAGGAA+AGG | + | chr3_3:82092625-82092644 | None:intergenic | 55.0% |
| AACAGGAGGGAAGGGCTTTG+GGG | + | chr3_3:82092636-82092655 | None:intergenic | 55.0% | |
| GAACAGGAGGGAAGGGCTTT+GGG | + | chr3_3:82092637-82092656 | None:intergenic | 55.0% | |
| AGAACAGGAGGGAAGGGCTT+TGG | + | chr3_3:82092638-82092657 | None:intergenic | 55.0% | |
| ! | GGGGTTTAGAACAGGAGGGA+AGG | + | chr3_3:82092645-82092664 | None:intergenic | 55.0% |
| ! | GCTTGGGGGTTTAGAACAGG+AGG | + | chr3_3:82092650-82092669 | None:intergenic | 55.0% |
| ! | TCCGCTTGGGGGTTTAGAAC+AGG | + | chr3_3:82092653-82092672 | None:intergenic | 55.0% |
| AGACCTTAAGGCTCCGCTTG+GGG | + | chr3_3:82092665-82092684 | None:intergenic | 55.0% | |
| CAACCAGCCAATCAAAGGGC+GGG | + | chr3_3:82092759-82092778 | None:intergenic | 55.0% | |
| CTGACCCCCTTTACTGCAGT+TGG | - | chr3_3:82092829-82092848 | Msa0477750:intron | 55.0% | |
| ! | CCCTTTACTGCAGTTGGCCT+TGG | - | chr3_3:82092835-82092854 | Msa0477750:intron | 55.0% |
| CCAAACTATGCGTCCATCCC+CGG | + | chr3_3:82094431-82094450 | None:intergenic | 55.0% | |
| ACAGTTGGCGCAGTCACACT+TGG | + | chr3_3:82094589-82094608 | None:intergenic | 55.0% | |
| TGCAGCACCAAAAGCCAGTG+GGG | - | chr3_3:82095610-82095629 | Msa0477750:intron | 55.0% | |
| !!! | CCGATTTCCCCACTGGCTTT+TGG | + | chr3_3:82095620-82095639 | None:intergenic | 55.0% |
| TGCTGTTCCGATTTCCCCAC+TGG | + | chr3_3:82095627-82095646 | None:intergenic | 55.0% | |
| TTGCATCGCATGACCCACCA+CGG | - | chr3_3:82095704-82095723 | Msa0477750:intron | 55.0% | |
| CGAGGTCTATGACCAGTCTC+GGG | - | chr3_3:82095902-82095921 | Msa0477750:intron | 55.0% | |
| TGAGGGATTGAGAGTCCGAC+GGG | + | chr3_3:82096441-82096460 | None:intergenic | 55.0% | |
| GTGAGGGATTGAGAGTCCGA+CGG | + | chr3_3:82096442-82096461 | None:intergenic | 55.0% | |
| GGAGACAGTGCGTTGAGAAG+AGG | - | chr3_3:82096676-82096695 | Msa0477750:intron | 55.0% | |
| GACAGTGCGTTGAGAAGAGG+GGG | - | chr3_3:82096679-82096698 | Msa0477750:intron | 55.0% | |
| ACAGTGCGTTGAGAAGAGGG+GGG | - | chr3_3:82096680-82096699 | Msa0477750:intron | 55.0% | |
| CCCCGAGAAAAAGGAATGGG+GGG | + | chr3_3:82097172-82097191 | None:intergenic | 55.0% | |
| ! | CCCCCCATTCCTTTTTCTCG+GGG | - | chr3_3:82097169-82097188 | Msa0477750:intron | 55.0% |
| CCCCCGAGAAAAAGGAATGG+GGG | + | chr3_3:82097173-82097192 | None:intergenic | 55.0% | |
| ! | CCCCCATTCCTTTTTCTCGG+GGG | - | chr3_3:82097170-82097189 | Msa0477750:intron | 55.0% |
| ! | TTTGAGGCTGAATGGAGGGG+AGG | - | chr3_3:82097916-82097935 | Msa0477750:CDS | 55.0% |
| CAGATCCATCGCCATGGCCA+TGG | - | chr3_3:82089974-82089993 | Msa0477750:three_prime_UTR | 60.0% | |
| AATCGCCATGGCCATGGCGA+TGG | + | chr3_3:82089982-82090001 | None:intergenic | 60.0% | |
| TCGCCATGGCCATGGCGATT+AGG | - | chr3_3:82089982-82090001 | Msa0477750:three_prime_UTR | 60.0% | |
| CGCCATGGCCATGGCGATTA+GGG | - | chr3_3:82089983-82090002 | Msa0477750:three_prime_UTR | 60.0% | |
| GCTTCACTCGACCTTCGCCA+TGG | - | chr3_3:82090616-82090635 | Msa0477750:intron | 60.0% | |
| TCCCAAACCATCTGCCCGTC+AGG | + | chr3_3:82091915-82091934 | None:intergenic | 60.0% | |
| TGGGAGTTTGTAGGGGAGGG+AGG | - | chr3_3:82092349-82092368 | Msa0477750:CDS | 60.0% | |
| GGGAGTTTGTAGGGGAGGGA+GGG | - | chr3_3:82092350-82092369 | Msa0477750:CDS | 60.0% | |
| GGAGTTTGTAGGGGAGGGAG+GGG | - | chr3_3:82092351-82092370 | Msa0477750:CDS | 60.0% | |
| GAGTTTGTAGGGGAGGGAGG+GGG | - | chr3_3:82092352-82092371 | Msa0477750:CDS | 60.0% | |
| AGTTTGTAGGGGAGGGAGGG+GGG | - | chr3_3:82092353-82092372 | Msa0477750:CDS | 60.0% | |
| !! | AGGGAAGGGCTTTGGGGGAA+AGG | + | chr3_3:82092630-82092649 | None:intergenic | 60.0% |
| ! | ACAGGAGGGAAGGGCTTTGG+GGG | + | chr3_3:82092635-82092654 | None:intergenic | 60.0% |
| AACCCCCAAGCGGAGCCTTA+AGG | - | chr3_3:82092659-82092678 | Msa0477750:intron | 60.0% | |
| GACCTTAAGGCTCCGCTTGG+GGG | + | chr3_3:82092664-82092683 | None:intergenic | 60.0% | |
| CAGCCAATCAAAGGGCGGGT+AGG | + | chr3_3:82092755-82092774 | None:intergenic | 60.0% | |
| CTACCCGCCCTTTGATTGGC+TGG | - | chr3_3:82092753-82092772 | Msa0477750:intron | 60.0% | |
| GCAGTAAAGGGGGTCAGTGC+AGG | + | chr3_3:82092826-82092845 | None:intergenic | 60.0% | |
| !! | TGAAGGTGAGTTGGTGGCGC+TGG | - | chr3_3:82093497-82093516 | Msa0477750:CDS | 60.0% |
| CCGGGGATGGACGCATAGTT+TGG | - | chr3_3:82094428-82094447 | Msa0477750:CDS | 60.0% | |
| CGGAACAGCAACACCAGAGG+AGG | - | chr3_3:82095637-82095656 | Msa0477750:intron | 60.0% | |
| ATGACCCACCACGGTTGCCA+GGG | - | chr3_3:82095713-82095732 | Msa0477750:intron | 60.0% | |
| GGTCTATGACCAGTCTCGGG+CGG | - | chr3_3:82095905-82095924 | Msa0477750:intron | 60.0% | |
| GAGGGATTGAGAGTCCGACG+GGG | + | chr3_3:82096440-82096459 | None:intergenic | 60.0% | |
| TGCGTTGAGAAGAGGGGGGA+TGG | - | chr3_3:82096684-82096703 | Msa0477750:intron | 60.0% | |
| GCGTTGAGAAGAGGGGGGAT+GGG | - | chr3_3:82096685-82096704 | Msa0477750:intron | 60.0% | |
| TGAGAAGAGGGGGGATGGGT+TGG | - | chr3_3:82096689-82096708 | Msa0477750:intron | 60.0% | |
| ! | GAGAAGAGGGGGGATGGGTT+GGG | - | chr3_3:82096690-82096709 | Msa0477750:intron | 60.0% |
| !! | AGAAGAGGGGGGATGGGTTG+GGG | - | chr3_3:82096691-82096710 | Msa0477750:intron | 60.0% |
| CATGACCCACCACGGTTGCC+AGG | - | chr3_3:82095712-82095731 | Msa0477750:intron | 65.0% | |
| AGGACCCTGGCAACCGTGGT+GGG | + | chr3_3:82095720-82095739 | None:intergenic | 65.0% | |
| GAACAGGACCCTGGCAACCG+TGG | + | chr3_3:82095724-82095743 | None:intergenic | 65.0% | |
| GCTGACATACCGCCCGAGAC+TGG | + | chr3_3:82095917-82095936 | None:intergenic | 65.0% | |
| !! | GAAGAGGGGGGATGGGTTGG+GGG | - | chr3_3:82096692-82096711 | Msa0477750:intron | 65.0% |
| CAGGACCCTGGCAACCGTGG+TGG | + | chr3_3:82095721-82095740 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 82089834 | 82098131 | 82089834 | ID=Msa0477750;Name=Msa0477750 |
| chr3_3 | mRNA | 82089834 | 82098131 | 82089834 | ID=Msa0477750-mRNA-1;Parent=Msa0477750;Name=Msa0477750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=153|0.90|0.91|1|1|1|12|366|1003 |
| chr3_3 | exon | 82089834 | 82090460 | 82089834 | ID=Msa0477750-mRNA-1:exon:22844;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82091445 | 82091558 | 82091445 | ID=Msa0477750-mRNA-1:exon:22843;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82091682 | 82091876 | 82091682 | ID=Msa0477750-mRNA-1:exon:22842;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82092039 | 82092134 | 82092039 | ID=Msa0477750-mRNA-1:exon:22841;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82092217 | 82092438 | 82092217 | ID=Msa0477750-mRNA-1:exon:22840;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82092981 | 82093772 | 82092981 | ID=Msa0477750-mRNA-1:exon:22839;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82094039 | 82094840 | 82094039 | ID=Msa0477750-mRNA-1:exon:22838;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82094933 | 82095048 | 82094933 | ID=Msa0477750-mRNA-1:exon:22837;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82095982 | 82096103 | 82095982 | ID=Msa0477750-mRNA-1:exon:22836;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82096922 | 82096984 | 82096922 | ID=Msa0477750-mRNA-1:exon:22835;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82097319 | 82097446 | 82097319 | ID=Msa0477750-mRNA-1:exon:22834;Parent=Msa0477750-mRNA-1 |
| chr3_3 | exon | 82097878 | 82098131 | 82097878 | ID=Msa0477750-mRNA-1:exon:22833;Parent=Msa0477750-mRNA-1 |
| chr3_3 | five_prime_UTR | 82097979 | 82098131 | 82097979 | ID=Msa0477750-mRNA-1:five_prime_utr;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82097878 | 82097978 | 82097878 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82097319 | 82097446 | 82097319 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82096922 | 82096984 | 82096922 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82095982 | 82096103 | 82095982 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82094933 | 82095048 | 82094933 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82094039 | 82094840 | 82094039 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82092981 | 82093772 | 82092981 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82092217 | 82092438 | 82092217 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82092039 | 82092134 | 82092039 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82091682 | 82091876 | 82091682 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82091445 | 82091558 | 82091445 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | CDS | 82090200 | 82090460 | 82090200 | ID=Msa0477750-mRNA-1:cds;Parent=Msa0477750-mRNA-1 |
| chr3_3 | three_prime_UTR | 82089834 | 82090199 | 82089834 | ID=Msa0477750-mRNA-1:three_prime_utr;Parent=Msa0477750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
