Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070890 | XP_003624579.2 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070890 | sp|Q9SPM5|APY2_ARATH | 72.354 | 463 | 125 | 2 | 7 | 466 | 9 | 471 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070890 | Q84UD8 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037330 | Msa1070890 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
| Msa0079280 | Msa1070890 | 0.802555 | 5.307222e-49 | -8.615850e-47 |
| Msa0126160 | Msa1070890 | 0.822864 | 1.885839e-53 | -8.615850e-47 |
| Msa0140880 | Msa1070890 | 0.802992 | 4.311639e-49 | -8.615850e-47 |
| Msa0178050 | Msa1070890 | 0.827740 | 1.323709e-54 | -8.615850e-47 |
| Msa0209140 | Msa1070890 | 0.811524 | 6.707537e-51 | -8.615850e-47 |
| Msa0218040 | Msa1070890 | 0.825746 | 3.961313e-54 | -8.615850e-47 |
| Msa0385310 | Msa1070890 | 0.859907 | 2.988824e-63 | -8.615850e-47 |
| Msa0389690 | Msa1070890 | 0.817197 | 3.735489e-52 | -8.615850e-47 |
| Msa0416020 | Msa1070890 | 0.803464 | 3.442563e-49 | -8.615850e-47 |
| Msa0427760 | Msa1070890 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0427950 | Msa1070890 | 0.821253 | 4.454933e-53 | -8.615850e-47 |
| Msa0428210 | Msa1070890 | 0.858257 | 9.327433e-63 | -8.615850e-47 |
| Msa0430230 | Msa1070890 | 0.848549 | 5.710295e-60 | -8.615850e-47 |
| Msa0474570 | Msa1070890 | 0.806807 | 6.875626e-50 | -8.615850e-47 |
| Msa0477750 | Msa1070890 | 0.808735 | 2.676135e-50 | -8.615850e-47 |
| Msa0479420 | Msa1070890 | 0.844402 | 7.732052e-59 | -8.615850e-47 |
| Msa1013880 | Msa1070890 | 0.803309 | 3.706608e-49 | -8.615850e-47 |
| Msa1027470 | Msa1070890 | 0.811571 | 6.548975e-51 | -8.615850e-47 |
| Msa1031390 | Msa1070890 | 0.939856 | 6.281303e-100 | -8.615850e-47 |
| Msa1045280 | Msa1070890 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa1055200 | Msa1070890 | 0.830539 | 2.774615e-55 | -8.615850e-47 |
| Msa1070890 | Msa1078830 | 0.811857 | 5.675148e-51 | -8.615850e-47 |
| Msa1070890 | Msa1078890 | 0.817458 | 3.263409e-52 | -8.615850e-47 |
| Msa1070890 | Msa1101120 | 0.918614 | 1.253943e-86 | -8.615850e-47 |
| Msa1070890 | Msa1165090 | 0.836570 | 8.659072e-57 | -8.615850e-47 |
| Msa1070890 | Msa1169220 | 0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa1070890 | Msa1192180 | 0.818381 | 2.019015e-52 | -8.615850e-47 |
| Msa1070890 | Msa1259730 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa1070890 | Msa1331300 | 0.822043 | 2.926124e-53 | -8.615850e-47 |
| Msa1070890 | Msa1373170 | 0.850025 | 2.216626e-60 | -8.615850e-47 |
| Msa1070890 | Msa1383820 | 0.859397 | 4.255776e-63 | -8.615850e-47 |
| Msa1070890 | Msa1403560 | 0.818308 | 2.097409e-52 | -8.615850e-47 |
| Msa1070890 | Msa1404680 | 0.822017 | 2.965717e-53 | -8.615850e-47 |
| Msa1070890 | Msa1464880 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
| Msa0301520 | Msa1070890 | 0.825551 | 4.406463e-54 | -8.615850e-47 |
| Msa0313730 | Msa1070890 | 0.800747 | 1.246505e-48 | -8.615850e-47 |
| Msa0326710 | Msa1070890 | 0.833306 | 5.752133e-56 | -8.615850e-47 |
| Msa0508180 | Msa1070890 | 0.837550 | 4.864801e-57 | -8.615850e-47 |
| Msa0519150 | Msa1070890 | 0.870715 | 1.182994e-66 | -8.615850e-47 |
| Msa0523110 | Msa1070890 | 0.855102 | 7.901614e-62 | -8.615850e-47 |
| Msa0525880 | Msa1070890 | 0.818030 | 2.424667e-52 | -8.615850e-47 |
| Msa0537760 | Msa1070890 | 0.800749 | 1.245541e-48 | -8.615850e-47 |
| Msa0563090 | Msa1070890 | 0.820112 | 8.147694e-53 | -8.615850e-47 |
| Msa0586450 | Msa1070890 | 0.829366 | 5.358326e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070890 | MtrunA17_Chr7g0252861 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
| Msa1070890 | MtrunA17_Chr6g0461671 | 77.412 | 456 | 101 | 1 | 13 | 466 | 26 | 481 | 0.0 | 674 |
| Msa1070890 | MtrunA17_Chr4g0015031 | 61.312 | 442 | 166 | 4 | 29 | 466 | 15 | 455 | 0.0 | 546 |
| Msa1070890 | MtrunA17_Chr7g0252891 | 59.594 | 443 | 173 | 5 | 29 | 466 | 26 | 467 | 0.0 | 526 |
| Msa1070890 | MtrunA17_Chr7g0252921 | 58.864 | 440 | 178 | 2 | 29 | 466 | 5 | 443 | 0.0 | 520 |
| Msa1070890 | MtrunA17_Chr7g0252911 | 55.814 | 430 | 187 | 2 | 39 | 466 | 16 | 444 | 2.53e-180 | 512 |
| Msa1070890 | MtrunA17_Chr7g0252881 | 58.237 | 431 | 176 | 3 | 39 | 466 | 16 | 445 | 1.73e-177 | 505 |
| Msa1070890 | MtrunA17_Chr7g0252941 | 52.000 | 175 | 81 | 2 | 266 | 438 | 6 | 179 | 1.71e-46 | 159 |
| Msa1070890 | MtrunA17_Chr5g0417201 | 28.288 | 403 | 233 | 11 | 59 | 432 | 71 | 446 | 6.10e-36 | 139 |
| Msa1070890 | MtrunA17_Chr7g0252901 | 52.326 | 86 | 41 | 0 | 373 | 458 | 4 | 89 | 1.09e-26 | 103 |
| Msa1070890 | MtrunA17_Chr4g0058831 | 33.684 | 190 | 99 | 6 | 68 | 231 | 52 | 240 | 9.21e-21 | 95.1 |
| Msa1070890 | MtrunA17_Chr8g0369851 | 26.277 | 274 | 158 | 10 | 59 | 299 | 93 | 355 | 5.39e-15 | 77.8 |
| Msa1070890 | MtrunA17_Chr5g0407961 | 26.394 | 269 | 152 | 9 | 66 | 299 | 95 | 352 | 2.34e-12 | 69.3 |
| Msa1070890 | MtrunA17_Chr7g0252931 | 46.269 | 67 | 32 | 2 | 207 | 273 | 11 | 73 | 3.49e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070890 | AT5G18280.1 | 72.354 | 463 | 125 | 2 | 7 | 466 | 9 | 471 | 0.0 | 642 |
| Msa1070890 | AT3G04080.1 | 71.429 | 462 | 130 | 1 | 7 | 466 | 9 | 470 | 0.0 | 629 |
| Msa1070890 | AT1G14240.1 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
| Msa1070890 | AT1G14240.4 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
| Msa1070890 | AT1G14240.2 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
| Msa1070890 | AT1G14250.1 | 29.565 | 460 | 255 | 15 | 1 | 432 | 21 | 439 | 4.97e-43 | 159 |
| Msa1070890 | AT1G14240.3 | 29.274 | 468 | 261 | 17 | 22 | 461 | 34 | 459 | 4.01e-41 | 153 |
| Msa1070890 | AT1G14230.1 | 28.810 | 420 | 248 | 10 | 68 | 461 | 81 | 475 | 1.31e-40 | 152 |
| Msa1070890 | AT2G02970.1 | 29.224 | 438 | 235 | 14 | 68 | 466 | 87 | 488 | 9.48e-39 | 148 |
Find 182 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCATGCTCCAAGATTT+TGG | 0.134487 | 7_2:+67198400 | None:intergenic |
| TCTCATCTTGTTGTGGCATC+TGG | 0.164470 | 7_2:-67198091 | Msa1070890:three_prime_UTR |
| CTTTATACTTTATGTACTTT+TGG | 0.174635 | 7_2:+67203074 | None:intergenic |
| TGCAGGCAACTGCAGGTTTA+AGG | 0.182550 | 7_2:-67201881 | Msa1070890:intron |
| GGCAAAATTGGAATTGGATA+TGG | 0.187903 | 7_2:-67198330 | Msa1070890:three_prime_UTR |
| GAAATTACTTCAGGCAAAAT+TGG | 0.206740 | 7_2:-67198342 | Msa1070890:three_prime_UTR |
| TCTAAAGGAAAATTTATTAA+TGG | 0.234840 | 7_2:-67197972 | Msa1070890:three_prime_UTR |
| CTATGGAGGAAAGTCATTTA+AGG | 0.236769 | 7_2:-67199133 | Msa1070890:CDS |
| CACATCAGCATCAGATTTAA+AGG | 0.239604 | 7_2:+67201709 | None:intergenic |
| AGTTGGACGTTTGAGCATTT+TGG | 0.261699 | 7_2:+67202672 | None:intergenic |
| GGAATCTCTGGTTTCCCTTT+TGG | 0.264364 | 7_2:-67202052 | Msa1070890:CDS |
| GTTACAATTAACTACCTATT+GGG | 0.279979 | 7_2:-67199788 | Msa1070890:CDS |
| ATTGTATAACTTGTTATAAA+AGG | 0.286172 | 7_2:+67203151 | None:intergenic |
| GCATCTGGGACTAATGATTT+TGG | 0.287558 | 7_2:-67198076 | Msa1070890:three_prime_UTR |
| GGGATCCAGCTCTGTGTCTT+GGG | 0.304946 | 7_2:+67202846 | None:intergenic |
| TTCTTAGGAACTTACAACTA+TGG | 0.307435 | 7_2:-67199150 | Msa1070890:intron |
| ACAATTGCAACTGGTGAGTT+TGG | 0.313352 | 7_2:+67198822 | None:intergenic |
| GGTTACAATTAACTACCTAT+TGG | 0.328895 | 7_2:-67199789 | Msa1070890:CDS |
| TCATTTAAGGCTTCATCCTC+TGG | 0.330482 | 7_2:-67199120 | Msa1070890:CDS |
| ATCTCCGGCAGAATCATAAT+TGG | 0.340284 | 7_2:+67202540 | None:intergenic |
| ACTTCAGGCAAAATTGGAAT+TGG | 0.344338 | 7_2:-67198336 | Msa1070890:three_prime_UTR |
| TAACTACCTATTGGGGAACT+TGG | 0.345032 | 7_2:-67199780 | Msa1070890:CDS |
| GAAAACCCGTGTATCTTATC+TGG | 0.351207 | 7_2:-67199365 | Msa1070890:CDS |
| CAGTATACATTGCTTGTTGA+TGG | 0.353066 | 7_2:-67198675 | Msa1070890:CDS |
| CTCATCTTGTTGTGGCATCT+GGG | 0.356862 | 7_2:-67198090 | Msa1070890:three_prime_UTR |
| AACTGCAGGTTTAAGGGCTT+TGG | 0.359320 | 7_2:-67201874 | Msa1070890:CDS |
| GGGATATGGAATGGTGGAGG+TGG | 0.368201 | 7_2:-67199009 | Msa1070890:CDS |
| GAGATTACGCACTTCTTAAT+CGG | 0.368496 | 7_2:-67202522 | Msa1070890:CDS |
| AAGATTATTCAAAGACTGTT+GGG | 0.372806 | 7_2:-67199754 | Msa1070890:CDS |
| AACTCGTGGATAAGTGGATT+TGG | 0.374683 | 7_2:+67198740 | None:intergenic |
| ACAAGATCCCAAACAATATC+AGG | 0.375376 | 7_2:-67202821 | Msa1070890:five_prime_UTR |
| AGATTACTCATCCAAAATCT+TGG | 0.379267 | 7_2:-67198411 | Msa1070890:three_prime_UTR |
| GGTGGAGCCTGATATTGTTT+GGG | 0.382081 | 7_2:+67202814 | None:intergenic |
| CACCCTCCGCTTTCTCCAAA+AGG | 0.382083 | 7_2:+67202037 | None:intergenic |
| CAAAGACACCTGTTCGAGTT+GGG | 0.382221 | 7_2:-67201993 | Msa1070890:CDS |
| AACAAGATGAGAAGAAATAA+AGG | 0.388938 | 7_2:+67198102 | None:intergenic |
| GATATGGAATGGTGGAGGTG+GGG | 0.396495 | 7_2:-67199007 | Msa1070890:CDS |
| GCAGGCAACTGCAGGTTTAA+GGG | 0.398221 | 7_2:-67201880 | Msa1070890:intron |
| AGGTGGAGCCTGATATTGTT+TGG | 0.401212 | 7_2:+67202813 | None:intergenic |
| AGGGATCCAGCTCTGTGTCT+TGG | 0.405129 | 7_2:+67202845 | None:intergenic |
| TGGAATGGTGGAGGTGGGGA+TGG | 0.410352 | 7_2:-67199003 | Msa1070890:CDS |
| CGACGTCGTGTAGTGTGGTT+TGG | 0.410799 | 7_2:+67202884 | None:intergenic |
| ACTGTTGGGGTAGTTGATCT+TGG | 0.412256 | 7_2:-67199740 | Msa1070890:CDS |
| GTGCATCTATATATCTTGTC+TGG | 0.413252 | 7_2:-67198199 | Msa1070890:three_prime_UTR |
| TGGTGATCAGAAATTACTTC+AGG | 0.422341 | 7_2:-67198351 | Msa1070890:three_prime_UTR |
| GGATTGAACGGCGGAGAGTT+CGG | 0.424959 | 7_2:+67202738 | None:intergenic |
| ACAAGATCCATGCAAAGATA+TGG | 0.426100 | 7_2:+67198702 | None:intergenic |
| GGAGTCGGAGGAGTGGTTAT+CGG | 0.427758 | 7_2:+67202702 | None:intergenic |
| ACATTGCTTGTTGATGGGTT+TGG | 0.428444 | 7_2:-67198669 | Msa1070890:intron |
| CATCAACAAGCAATGTATAC+TGG | 0.429614 | 7_2:+67198676 | None:intergenic |
| ACACATATGAAGTGCACTTT+TGG | 0.430750 | 7_2:-67199033 | Msa1070890:CDS |
| CTCTGAGTCTGATGCTGCCA+TGG | 0.431442 | 7_2:-67199687 | Msa1070890:CDS |
| ACGGAATCTGTAGATCTTAT+CGG | 0.432095 | 7_2:+67202633 | None:intergenic |
| AGGAACATCTCCTTGACATA+TGG | 0.434201 | 7_2:+67199638 | None:intergenic |
| TGGCCGTTGGATGTGGTGGC+AGG | 0.434886 | 7_2:+67202793 | None:intergenic |
| CACAAGAAGGTGCTTATCAA+TGG | 0.436042 | 7_2:-67201667 | Msa1070890:CDS |
| AGTAATCTAACTCATGAAAT+CGG | 0.437031 | 7_2:+67198426 | None:intergenic |
| GGATATGGAATGGTGGAGGT+GGG | 0.437663 | 7_2:-67199008 | Msa1070890:CDS |
| GTCTGGAAAGATGAACAAAA+TGG | 0.455253 | 7_2:-67198182 | Msa1070890:three_prime_UTR |
| CCACACACCCCAACTCGAAC+AGG | 0.457831 | 7_2:+67201985 | None:intergenic |
| AGGTTTAAGGGCTTTGGAAG+GGG | 0.457955 | 7_2:-67201868 | Msa1070890:CDS |
| GCTCAAACGTCCAACTCGTC+AGG | 0.458315 | 7_2:-67202665 | Msa1070890:CDS |
| ACAGCAAGCAGCGGAATCTC+TGG | 0.460912 | 7_2:-67202064 | Msa1070890:CDS |
| AAAGATTATTCAAAGACTGT+TGG | 0.463019 | 7_2:-67199755 | Msa1070890:CDS |
| CGTAGATGATACTGCTTCAA+TGG | 0.465000 | 7_2:+67198457 | None:intergenic |
| CTCTTCAACTCGTGGATAAG+TGG | 0.465473 | 7_2:+67198734 | None:intergenic |
| GGGGTAGTTGATCTTGGAGG+TGG | 0.468475 | 7_2:-67199734 | Msa1070890:CDS |
| TATTTCTTCTCATCTTGTTG+TGG | 0.469112 | 7_2:-67198098 | Msa1070890:three_prime_UTR |
| AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7_2:-67199604 | Msa1070890:intron |
| TGAAGATTACGTATTGTATA+CGG | 0.474455 | 7_2:+67203025 | None:intergenic |
| TCCTCTCCATCTGTTACTTG+TGG | 0.475432 | 7_2:+67199662 | None:intergenic |
| ATCTGTTACTTGTGGAGCCA+TGG | 0.478818 | 7_2:+67199670 | None:intergenic |
| GCAAAATTGGAATTGGATAT+GGG | 0.482796 | 7_2:-67198329 | Msa1070890:three_prime_UTR |
| GTTGGGGTAGTTGATCTTGG+AGG | 0.487477 | 7_2:-67199737 | Msa1070890:CDS |
| TTCATTTAAGCTTGCTCCAG+AGG | 0.488216 | 7_2:+67199104 | None:intergenic |
| AACTACCTATTGGGGAACTT+GGG | 0.492294 | 7_2:-67199779 | Msa1070890:CDS |
| GTCGAGGCAGCTTGGCCGCT+AGG | 0.494567 | 7_2:-67198485 | Msa1070890:CDS |
| CAGGTTTAAGGGCTTTGGAA+GGG | 0.494592 | 7_2:-67201869 | Msa1070890:CDS |
| CTGACCGTGGCCGTTGGATG+TGG | 0.495023 | 7_2:+67202786 | None:intergenic |
| ACAAACGTGATGAGAAGGAT+AGG | 0.495209 | 7_2:+67202586 | None:intergenic |
| ATTAAGAAGTGCGTAATCTC+CGG | 0.499147 | 7_2:+67202525 | None:intergenic |
| AGCGGAGGGTGTTGTTCCAC+GGG | 0.500228 | 7_2:-67202025 | Msa1070890:CDS |
| GGCTTTGGAAGGGGATGCAT+CGG | 0.501347 | 7_2:-67201859 | Msa1070890:CDS |
| ATTCTTGCATAGAAATCTAA+AGG | 0.501938 | 7_2:-67197987 | Msa1070890:three_prime_UTR |
| TTCTGATCACCATGAATGAC+AGG | 0.503190 | 7_2:+67198362 | None:intergenic |
| ATGTCAAGGAGATGTTCCTC+AGG | 0.505087 | 7_2:-67199634 | Msa1070890:CDS |
| TTGGTGATGCAGGCAACTGC+AGG | 0.505372 | 7_2:-67201888 | Msa1070890:intron |
| GCAGGACGAACAATTGCAAC+TGG | 0.506202 | 7_2:+67198813 | None:intergenic |
| GTTATACAATGTTTACGTAA+AGG | 0.509511 | 7_2:-67203138 | Msa1070890:five_prime_UTR |
| GCTCTCAGTTACTTGCGCTA+TGG | 0.509756 | 7_2:-67199434 | Msa1070890:intron |
| ACAAGAAGGTGCTTATCAAT+GGG | 0.512019 | 7_2:-67201666 | Msa1070890:intron |
| CTTTAAATCTGATGCTGATG+TGG | 0.513532 | 7_2:-67201708 | Msa1070890:CDS |
| GAAACACTGCCTGTCATTCA+TGG | 0.516858 | 7_2:-67198371 | Msa1070890:three_prime_UTR |
| TGCTGATGTGGTTACAGTGT+TGG | 0.518730 | 7_2:-67201696 | Msa1070890:CDS |
| AGTATACATTGCTTGTTGAT+GGG | 0.518914 | 7_2:-67198674 | Msa1070890:CDS |
| ACCCTCCGCTTTCTCCAAAA+GGG | 0.523433 | 7_2:+67202038 | None:intergenic |
| ATGCAAAAGCGTGGCTCACA+AGG | 0.525610 | 7_2:-67199082 | Msa1070890:CDS |
| TGTATCTTATCTGGCTCTGA+TGG | 0.528005 | 7_2:-67199356 | Msa1070890:intron |
| GCAGGTTTAAGGGCTTTGGA+AGG | 0.529646 | 7_2:-67201870 | Msa1070890:CDS |
| GGTGGGATATGGAATGGTGG+AGG | 0.530190 | 7_2:-67199012 | Msa1070890:CDS |
| ATATATCTGATTTACAGCTC+TGG | 0.534098 | 7_2:-67198243 | Msa1070890:three_prime_UTR |
| GCGGCCAAGCTGCCTCGACA+AGG | 0.534743 | 7_2:+67198489 | None:intergenic |
| CCGTTGGATGTGGTGGCAGG+TGG | 0.535170 | 7_2:+67202796 | None:intergenic |
| GTTATCGGAAGGAGGAGAAG+TGG | 0.538367 | 7_2:+67202717 | None:intergenic |
| AAGCGGAGGGTGTTGTTCCA+CGG | 0.539954 | 7_2:-67202026 | Msa1070890:CDS |
| GTCTTTGATCGCAATTCCCG+TGG | 0.543605 | 7_2:+67202009 | None:intergenic |
| TGATTGTGATTTGTGTGTGC+GGG | 0.545007 | 7_2:+67202948 | None:intergenic |
| AACGGCGGAGAGTTCGGCGG+AGG | 0.545232 | 7_2:+67202744 | None:intergenic |
| ATGCCCTTGTCGAGGCAGCT+TGG | 0.547480 | 7_2:-67198493 | Msa1070890:CDS |
| ACCGTGGCCGTTGGATGTGG+TGG | 0.548274 | 7_2:+67202789 | None:intergenic |
| CGGAGGAAGGTGATCGGTAA+CGG | 0.548616 | 7_2:+67202761 | None:intergenic |
| AGAGATTCCGCTGCTTGCTG+TGG | 0.550357 | 7_2:+67202066 | None:intergenic |
| AGTTGCAATTGTTCGTCCTG+CGG | 0.552911 | 7_2:-67198811 | Msa1070890:CDS |
| CACTTATCCACGAGTTGAAG+AGG | 0.553464 | 7_2:-67198733 | Msa1070890:CDS |
| TTTCTTTGACCGGGCTGCTG+AGG | 0.553807 | 7_2:-67198953 | Msa1070890:intron |
| AGCTCCAATTATGATTCTGC+CGG | 0.554467 | 7_2:-67202544 | Msa1070890:CDS |
| TACAATACGTAATCTTCACT+TGG | 0.555016 | 7_2:-67203020 | Msa1070890:five_prime_UTR |
| ACCAATGTAATCTCTTGCCA+TGG | 0.556995 | 7_2:+67198536 | None:intergenic |
| CAAACGTGATGAGAAGGATA+GGG | 0.558245 | 7_2:+67202587 | None:intergenic |
| TCAAAGACACCTGTTCGAGT+TGG | 0.559745 | 7_2:-67201994 | Msa1070890:CDS |
| ATATTGTTTGGGATCTTGTG+AGG | 0.560025 | 7_2:+67202825 | None:intergenic |
| GAGAGTGACTCCTGACGAGT+TGG | 0.560863 | 7_2:+67202655 | None:intergenic |
| GCCACCACATCCAACGGCCA+CGG | 0.561052 | 7_2:-67202790 | Msa1070890:five_prime_UTR |
| GCGGAGAGTTCGGCGGAGGA+AGG | 0.561747 | 7_2:+67202748 | None:intergenic |
| CCACCTGCCACCACATCCAA+CGG | 0.562179 | 7_2:-67202796 | Msa1070890:five_prime_UTR |
| CGGCCAAGCTGCCTCGACAA+GGG | 0.564799 | 7_2:+67198490 | None:intergenic |
| GGATCCAGCTCTGTGTCTTG+GGG | 0.566149 | 7_2:+67202847 | None:intergenic |
| AATTTAGATCTTGTTCACAT+TGG | 0.568868 | 7_2:-67202403 | Msa1070890:CDS |
| TTTGGTGAATTCGGAGTCGG+AGG | 0.569681 | 7_2:+67202690 | None:intergenic |
| TAATGTAAGATTGTGAAGGA+AGG | 0.569773 | 7_2:+67202994 | None:intergenic |
| AAAGAACAAACGTGATGAGA+AGG | 0.569919 | 7_2:+67202581 | None:intergenic |
| AATAACAGCATAAGAGCCAC+CGG | 0.574955 | 7_2:+67202477 | None:intergenic |
| TATTGTTTGGGATCTTGTGA+GGG | 0.575359 | 7_2:+67202826 | None:intergenic |
| CCATCCCCAAGACACAGAGC+TGG | 0.575534 | 7_2:-67202851 | Msa1070890:five_prime_UTR |
| TGGAGGTGGATCTGTTCAGA+TGG | 0.576048 | 7_2:-67199720 | Msa1070890:CDS |
| AAGTACATAAAGTATAAAGT+TGG | 0.577621 | 7_2:-67203070 | Msa1070890:five_prime_UTR |
| AAAGACACCTGTTCGAGTTG+GGG | 0.577659 | 7_2:-67201992 | Msa1070890:intron |
| GAACCTTCCATATCTTTGCA+TGG | 0.579721 | 7_2:-67198709 | Msa1070890:CDS |
| TGAGCATACGCACTCAAACC+AGG | 0.584096 | 7_2:+67202093 | None:intergenic |
| AAATAAATACCTCAGCAGCC+CGG | 0.585473 | 7_2:+67198944 | None:intergenic |
| TTACAATTAACTACCTATTG+GGG | 0.589083 | 7_2:-67199787 | Msa1070890:CDS |
| GCAGCATCCTCAAAATCCGC+AGG | 0.589555 | 7_2:+67198795 | None:intergenic |
| TGTTTGCAGGCATATATCCA+TGG | 0.590051 | 7_2:-67198553 | Msa1070890:intron |
| AGGTTCCCCTCTTCAACTCG+TGG | 0.591207 | 7_2:+67198726 | None:intergenic |
| ACTTATCCACGAGTTGAAGA+GGG | 0.594026 | 7_2:-67198732 | Msa1070890:CDS |
| AGGAGGAGAAGTGGATTGAA+CGG | 0.595772 | 7_2:+67202726 | None:intergenic |
| ATGGCTCCACAAGTAACAGA+TGG | 0.605642 | 7_2:-67199668 | Msa1070890:CDS |
| TGAAACGACGTCGTGTAGTG+TGG | 0.605749 | 7_2:+67202879 | None:intergenic |
| GTGTTGGATGGAACACAAGA+AGG | 0.606025 | 7_2:-67201680 | Msa1070890:CDS |
| ATACGACGATGCCCTTGTCG+AGG | 0.610647 | 7_2:-67198501 | Msa1070890:CDS |
| GAATCATAATTGGAGCTCGA+CGG | 0.615838 | 7_2:+67202550 | None:intergenic |
| GATGTGGTTACAGTGTTGGA+TGG | 0.618908 | 7_2:-67201692 | Msa1070890:CDS |
| TCCACAAGTAACAGATGGAG+AGG | 0.619159 | 7_2:-67199663 | Msa1070890:CDS |
| AGATTATTCAAAGACTGTTG+GGG | 0.619546 | 7_2:-67199753 | Msa1070890:CDS |
| TGGAGAGGATCCATATGTCA+AGG | 0.619661 | 7_2:-67199648 | Msa1070890:CDS |
| TTAGGAACTTACAACTATGG+AGG | 0.619885 | 7_2:-67199147 | Msa1070890:intron |
| ATCTTGGAGCATGAAATTTG+TGG | 0.621439 | 7_2:-67198395 | Msa1070890:three_prime_UTR |
| GGCAGCATCAGACTCAGAGA+TGG | 0.631462 | 7_2:+67199691 | None:intergenic |
| TGTCAAGGAGATGTTCCTCA+GGG | 0.632817 | 7_2:-67199633 | Msa1070890:CDS |
| CTTGTGAATATAGTCAATTG+TGG | 0.633196 | 7_2:-67198044 | Msa1070890:three_prime_UTR |
| GATCCATGCAAAGATATGGA+AGG | 0.635979 | 7_2:+67198706 | None:intergenic |
| GTTCGGCGGAGGAAGGTGAT+CGG | 0.639590 | 7_2:+67202755 | None:intergenic |
| GAGGAGTGGTTATCGGAAGG+AGG | 0.641438 | 7_2:+67202709 | None:intergenic |
| GATAAGATCTACAGATTCCG+TGG | 0.643142 | 7_2:-67202631 | Msa1070890:CDS |
| TCGGAGGAGTGGTTATCGGA+AGG | 0.643921 | 7_2:+67202706 | None:intergenic |
| ATCGGTAACGGATCTGACCG+TGG | 0.644280 | 7_2:+67202773 | None:intergenic |
| CTTAAATGAATGCAAAAGCG+TGG | 0.648545 | 7_2:-67199091 | Msa1070890:CDS |
| AATGTAATGTAAGATTGTGA+AGG | 0.658619 | 7_2:+67202990 | None:intergenic |
| TGAATTCGGAGTCGGAGGAG+TGG | 0.659077 | 7_2:+67202695 | None:intergenic |
| GTGATTGTGATTTGTGTGTG+CGG | 0.661840 | 7_2:+67202947 | None:intergenic |
| TTGAACGGCGGAGAGTTCGG+CGG | 0.665018 | 7_2:+67202741 | None:intergenic |
| TTTGGTGGGATATGGAATGG+TGG | 0.667285 | 7_2:-67199015 | Msa1070890:CDS |
| CAGAGCCAGATAAGATACAC+GGG | 0.667545 | 7_2:+67199360 | None:intergenic |
| TCAGAGCCAGATAAGATACA+CGG | 0.667817 | 7_2:+67199359 | None:intergenic |
| TCAGAAACCACAGCAAGCAG+CGG | 0.674371 | 7_2:-67202073 | Msa1070890:CDS |
| ATCGGATAAGATATTGCAAG+CGG | 0.679308 | 7_2:-67201841 | Msa1070890:intron |
| CTTATCCACGAGTTGAAGAG+GGG | 0.688203 | 7_2:-67198731 | Msa1070890:CDS |
| GCTTCAATGGCGCTTCCTAG+CGG | 0.690235 | 7_2:+67198470 | None:intergenic |
| AGACAACAAGAAGAGTGCCA+CGG | 0.696066 | 7_2:+67202614 | None:intergenic |
| AGGAGAAGTGGATTGAACGG+CGG | 0.708077 | 7_2:+67202729 | None:intergenic |
| TCCATGGCAAGAGATTACAT+TGG | 0.741199 | 7_2:-67198537 | Msa1070890:CDS |
| GTCAAGGAGATGTTCCTCAG+GGG | 0.744910 | 7_2:-67199632 | Msa1070890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATAATTAATTTTT+TGG | - | chr7_2:67199839-67199858 | Msa1070890:intron | 0.0% |
| !! | AAATTTGAATTGAATTTATT+TGG | - | chr7_2:67199164-67199183 | Msa1070890:intron | 10.0% |
| !!! | ATTTATAAAATTTTGAAATC+AGG | - | chr7_2:67200366-67200385 | Msa1070890:intron | 10.0% |
| !!! | TTTATAAAATTTTGAAATCA+GGG | - | chr7_2:67200367-67200386 | Msa1070890:intron | 10.0% |
| !!! | TATAAGTATAAGAAATTTTT+TGG | + | chr7_2:67200498-67200517 | None:intergenic | 10.0% |
| !! | AAACAAGATATTTAAAAATA+TGG | - | chr7_2:67200529-67200548 | Msa1070890:intron | 10.0% |
| !!! | ATTGTATAACTTGTTATAAA+AGG | + | chr7_2:67197923-67197942 | None:intergenic | 15.0% |
| !! | ATTCCATAAAATAAAAAAGA+TGG | - | chr7_2:67198753-67198772 | Msa1070890:CDS | 15.0% |
| !! | AATTAACAAAATCTATATTC+AGG | - | chr7_2:67199578-67199597 | Msa1070890:intron | 15.0% |
| !! | ATTTATTCTATCAATTTCTT+TGG | - | chr7_2:67200062-67200081 | Msa1070890:intron | 15.0% |
| !! | TAGAATTATAATCAAATCTT+CGG | + | chr7_2:67200773-67200792 | None:intergenic | 15.0% |
| !!! | AAAGAATTTTATTTAAACAG+GGG | + | chr7_2:67200869-67200888 | None:intergenic | 15.0% |
| !!! | GAAAGAATTTTATTTAAACA+GGG | + | chr7_2:67200870-67200889 | None:intergenic | 15.0% |
| !!! | TGAAAGAATTTTATTTAAAC+AGG | + | chr7_2:67200871-67200890 | None:intergenic | 15.0% |
| !!! | TATAACTTTAGAGAAAATAT+AGG | + | chr7_2:67201044-67201063 | None:intergenic | 15.0% |
| !! | ACATTTAAACAAAAATGAAA+TGG | + | chr7_2:67202926-67202945 | None:intergenic | 15.0% |
| !! | TCTAAAGGAAAATTTATTAA+TGG | - | chr7_2:67203099-67203118 | Msa1070890:intron | 15.0% |
| !!! | TCTGTATATACACATTTTTT+TGG | + | chr7_2:67197967-67197986 | None:intergenic | 20.0% |
| !!! | CTTTATACTTTATGTACTTT+TGG | + | chr7_2:67198000-67198019 | None:intergenic | 20.0% |
| !! | AAGTACATAAAGTATAAAGT+TGG | - | chr7_2:67198001-67198020 | Msa1070890:three_prime_UTR | 20.0% |
| !!! | GTTCCATCTTTTTTATTTTA+TGG | + | chr7_2:67198759-67198778 | None:intergenic | 20.0% |
| !! | ATTTAAATTTCGTTGATGTA+AGG | - | chr7_2:67199312-67199331 | Msa1070890:intron | 20.0% |
| !! | ATTCATATAATACTAGTGAA+TGG | + | chr7_2:67199503-67199522 | None:intergenic | 20.0% |
| !! | AAATAGATAGAGAAATTGTA+TGG | + | chr7_2:67199749-67199768 | None:intergenic | 20.0% |
| !!! | TAATTAATTTTTTGGCTGTA+TGG | - | chr7_2:67199847-67199866 | Msa1070890:intron | 20.0% |
| !! | ACGCAAGATATTTAAAAATA+TGG | - | chr7_2:67200171-67200190 | Msa1070890:intron | 20.0% |
| !! | ATTATGACTTATGAGATTTA+TGG | - | chr7_2:67200651-67200670 | Msa1070890:intron | 20.0% |
| !! | TAACAATTTATCTTGCATTA+TGG | + | chr7_2:67200796-67200815 | None:intergenic | 20.0% |
| !!! | TATTTTCTCTAAAGTTATAC+CGG | - | chr7_2:67201045-67201064 | Msa1070890:intron | 20.0% |
| !! | GTTAATGCTATTAGTATTAA+AGG | + | chr7_2:67201546-67201565 | None:intergenic | 20.0% |
| ! | GTTATACAATGTTTACGTAA+AGG | - | chr7_2:67197933-67197952 | Msa1070890:three_prime_UTR | 25.0% |
| ! | TGAAGATTACGTATTGTATA+CGG | + | chr7_2:67198049-67198068 | None:intergenic | 25.0% |
| ! | AATGTAATGTAAGATTGTGA+AGG | + | chr7_2:67198084-67198103 | None:intergenic | 25.0% |
| ! | CAAAATGAAAAACATGAACA+CGG | + | chr7_2:67198643-67198662 | None:intergenic | 25.0% |
| ! | AATTTAGATCTTGTTCACAT+TGG | - | chr7_2:67198668-67198687 | Msa1070890:intron | 25.0% |
| !! | GGAACAATTTGCATTTTATT+AGG | - | chr7_2:67198774-67198793 | Msa1070890:CDS | 25.0% |
| ! | TCATCAAAATTATTTGAGTG+TGG | - | chr7_2:67198814-67198833 | Msa1070890:CDS | 25.0% |
| !!! | TTTGTGTGTTGTTTTTATGA+AGG | - | chr7_2:67199141-67199160 | Msa1070890:CDS | 25.0% |
| !! | AACATAAGCTGATTTCATAT+TGG | - | chr7_2:67199948-67199967 | Msa1070890:intron | 25.0% |
| !! | TCTTTGGAAAAAAAAAGAAC+TGG | - | chr7_2:67200078-67200097 | Msa1070890:intron | 25.0% |
| !!! | TGTATTTCTGAAACTGTATT+TGG | - | chr7_2:67200118-67200137 | Msa1070890:intron | 25.0% |
| ! | AAATATGGTTCAGTTTGATA+AGG | - | chr7_2:67200186-67200205 | Msa1070890:intron | 25.0% |
| !!! | TTTTGAAACTGTTATGGTAA+TGG | + | chr7_2:67200222-67200241 | None:intergenic | 25.0% |
| ! | TACTTTATGAGTTTGAAAAC+TGG | - | chr7_2:67200318-67200337 | Msa1070890:intron | 25.0% |
| ! | ACTTTATGAGTTTGAAAACT+GGG | - | chr7_2:67200319-67200338 | Msa1070890:intron | 25.0% |
| !!! | ATAAAATTTTGAAATCAGGG+TGG | - | chr7_2:67200370-67200389 | Msa1070890:intron | 25.0% |
| !!! | TAAAATTTTGAAATCAGGGT+GGG | - | chr7_2:67200371-67200390 | Msa1070890:intron | 25.0% |
| !! | ATTCTCAGTTTTCTCAAATA+TGG | - | chr7_2:67200683-67200702 | Msa1070890:intron | 25.0% |
| !! | GATAATCTTAACTTGAAAGA+TGG | - | chr7_2:67200705-67200724 | Msa1070890:intron | 25.0% |
| ! | TGCAAGATAAATTGTTACAT+TGG | - | chr7_2:67200799-67200818 | Msa1070890:intron | 25.0% |
| ! | TTCGTTAACATAGTTGAATT+TGG | - | chr7_2:67200900-67200919 | Msa1070890:intron | 25.0% |
| !!! | TTGGTTTTTTCTATTTGAAG+AGG | - | chr7_2:67200919-67200938 | Msa1070890:intron | 25.0% |
| ! | ATTAAACTATTGATCAGAAC+AGG | + | chr7_2:67201123-67201142 | None:intergenic | 25.0% |
| ! | GTTACAATTAACTACCTATT+GGG | - | chr7_2:67201283-67201302 | Msa1070890:intron | 25.0% |
| ! | TTACAATTAACTACCTATTG+GGG | - | chr7_2:67201284-67201303 | Msa1070890:intron | 25.0% |
| ! | AAAGATTATTCAAAGACTGT+TGG | - | chr7_2:67201316-67201335 | Msa1070890:intron | 25.0% |
| ! | AAGATTATTCAAAGACTGTT+GGG | - | chr7_2:67201317-67201336 | Msa1070890:intron | 25.0% |
| !! | TTTTTCTTTTCTTTGTTCAC+AGG | - | chr7_2:67201520-67201539 | Msa1070890:intron | 25.0% |
| ! | ATACTAATAGCATTAACTCA+TGG | - | chr7_2:67201549-67201568 | Msa1070890:intron | 25.0% |
| !! | TTTTCGTATCAACTAATGAA+AGG | + | chr7_2:67201819-67201838 | None:intergenic | 25.0% |
| !!! | TTTTTTCATTTAACGCTTCT+TGG | - | chr7_2:67202147-67202166 | Msa1070890:intron | 25.0% |
| ! | ATGTATAACTATCCAAACTT+TGG | + | chr7_2:67202439-67202458 | None:intergenic | 25.0% |
| ! | AGTAATCTAACTCATGAAAT+CGG | + | chr7_2:67202648-67202667 | None:intergenic | 25.0% |
| ! | AACAAGATGAGAAGAAATAA+AGG | + | chr7_2:67202972-67202991 | None:intergenic | 25.0% |
| ! | ATTCTTGCATAGAAATCTAA+AGG | - | chr7_2:67203084-67203103 | Msa1070890:intron | 25.0% |
| TACAATACGTAATCTTCACT+TGG | - | chr7_2:67198051-67198070 | Msa1070890:three_prime_UTR | 30.0% | |
| TAATGTAAGATTGTGAAGGA+AGG | + | chr7_2:67198080-67198099 | None:intergenic | 30.0% | |
| !! | TTTGAGCATTTTGGTGAATT+CGG | + | chr7_2:67198393-67198412 | None:intergenic | 30.0% |
| !!! | TATGCTGTTATTTTTGATGC+TGG | - | chr7_2:67198605-67198624 | Msa1070890:intron | 30.0% |
| ! | AACACAATTTTCTCTGCAAT+AGG | - | chr7_2:67198719-67198738 | Msa1070890:CDS | 30.0% |
| GATATACAATTAAGCGCAAT+AGG | - | chr7_2:67198875-67198894 | Msa1070890:intron | 30.0% | |
| !! | TTGAATTTATTTGGTGATGC+AGG | - | chr7_2:67199173-67199192 | Msa1070890:intron | 30.0% |
| TGTATCTTTCTCAATTTCAG+TGG | - | chr7_2:67199263-67199282 | Msa1070890:intron | 30.0% | |
| AATTTCGTTGATGTAAGGTA+AGG | - | chr7_2:67199317-67199336 | Msa1070890:intron | 30.0% | |
| ATTTCGTTGATGTAAGGTAA+GGG | - | chr7_2:67199318-67199337 | Msa1070890:intron | 30.0% | |
| CATCATGTCTCATATTTACA+GGG | + | chr7_2:67199704-67199723 | None:intergenic | 30.0% | |
| TCATCATGTCTCATATTTAC+AGG | + | chr7_2:67199705-67199724 | None:intergenic | 30.0% | |
| TATCTATTTGTATGACTCCA+AGG | - | chr7_2:67199760-67199779 | Msa1070890:CDS | 30.0% | |
| TGTATGGTAAGAATATCTTC+TGG | - | chr7_2:67199863-67199882 | Msa1070890:intron | 30.0% | |
| GTATGGTAAGAATATCTTCT+GGG | - | chr7_2:67199864-67199883 | Msa1070890:intron | 30.0% | |
| TACCATAACAGTTTCAAAAC+AGG | - | chr7_2:67200223-67200242 | Msa1070890:intron | 30.0% | |
| ACCATAACAGTTTCAAAACA+GGG | - | chr7_2:67200224-67200243 | Msa1070890:intron | 30.0% | |
| TTTGAAAACTGGGATGAATA+TGG | - | chr7_2:67200329-67200348 | Msa1070890:intron | 30.0% | |
| CAACTTAACAATGAAAAGTG+CGG | - | chr7_2:67200610-67200629 | Msa1070890:intron | 30.0% | |
| TAAGTCATAATGCTGTTCTT+CGG | + | chr7_2:67200642-67200661 | None:intergenic | 30.0% | |
| TGACTTATGAGATTTATGGA+TGG | - | chr7_2:67200655-67200674 | Msa1070890:intron | 30.0% | |
| GACTTATGAGATTTATGGAT+GGG | - | chr7_2:67200656-67200675 | Msa1070890:intron | 30.0% | |
| ! | TTAACTTGAAAGATGGACAT+AGG | - | chr7_2:67200712-67200731 | Msa1070890:intron | 30.0% |
| GTTCAACAATGAAAAGCTTA+AGG | - | chr7_2:67200841-67200860 | Msa1070890:intron | 30.0% | |
| TTTCTATTTGAAGAGGATGA+TGG | - | chr7_2:67200926-67200945 | Msa1070890:intron | 30.0% | |
| !! | GAACTCTGAAATCTAAAGAA+TGG | - | chr7_2:67200991-67201010 | Msa1070890:intron | 30.0% |
| !! | TTTTATTTACCGGTGTGAAT+TGG | + | chr7_2:67201100-67201119 | None:intergenic | 30.0% |
| !!! | TCAGAACAGGTTTTATTTAC+CGG | + | chr7_2:67201110-67201129 | None:intergenic | 30.0% |
| !!! | ACCTTGTCTCGTTTTATTTT+AGG | - | chr7_2:67201261-67201280 | Msa1070890:intron | 30.0% |
| ACCTAAAATAAAACGAGACA+AGG | + | chr7_2:67201265-67201284 | None:intergenic | 30.0% | |
| GGTTACAATTAACTACCTAT+TGG | - | chr7_2:67201282-67201301 | Msa1070890:intron | 30.0% | |
| AGATTATTCAAAGACTGTTG+GGG | - | chr7_2:67201318-67201337 | Msa1070890:intron | 30.0% | |
| AATATTACCTCTATGTTCAC+AGG | - | chr7_2:67201467-67201486 | Msa1070890:intron | 30.0% | |
| TTCTTAGGAACTTACAACTA+TGG | - | chr7_2:67201921-67201940 | Msa1070890:intron | 30.0% | |
| AGAAAAATGAGGCAACAAAT+AGG | + | chr7_2:67202103-67202122 | None:intergenic | 30.0% | |
| ! | AGTATACATTGCTTGTTGAT+GGG | - | chr7_2:67202397-67202416 | Msa1070890:CDS | 30.0% |
| !!! | GTAGGTTTTATTCCAAAGTT+TGG | - | chr7_2:67202424-67202443 | Msa1070890:CDS | 30.0% |
| GTTTGGATAGTTATACATGA+CGG | - | chr7_2:67202441-67202460 | Msa1070890:CDS | 30.0% | |
| AGATTACTCATCCAAAATCT+TGG | - | chr7_2:67202660-67202679 | Msa1070890:CDS | 30.0% | |
| ! | AATTTCATGCTCCAAGATTT+TGG | + | chr7_2:67202674-67202693 | None:intergenic | 30.0% |
| GAAATTACTTCAGGCAAAAT+TGG | - | chr7_2:67202729-67202748 | Msa1070890:five_prime_UTR | 30.0% | |
| GCAAAATTGGAATTGGATAT+GGG | - | chr7_2:67202742-67202761 | Msa1070890:five_prime_UTR | 30.0% | |
| ATATATCTGATTTACAGCTC+TGG | - | chr7_2:67202828-67202847 | Msa1070890:five_prime_UTR | 30.0% | |
| TATTTCTTCTCATCTTGTTG+TGG | - | chr7_2:67202973-67202992 | Msa1070890:five_prime_UTR | 30.0% | |
| CTTGTGAATATAGTCAATTG+TGG | - | chr7_2:67203027-67203046 | Msa1070890:five_prime_UTR | 30.0% | |
| ! | TATTGTTTGGGATCTTGTGA+GGG | + | chr7_2:67198248-67198267 | None:intergenic | 35.0% |
| ! | ATATTGTTTGGGATCTTGTG+AGG | + | chr7_2:67198249-67198268 | None:intergenic | 35.0% |
| ACAAGATCCCAAACAATATC+AGG | - | chr7_2:67198250-67198269 | Msa1070890:three_prime_UTR | 35.0% | |
| ACGGAATCTGTAGATCTTAT+CGG | + | chr7_2:67198441-67198460 | None:intergenic | 35.0% | |
| AAAGAACAAACGTGATGAGA+AGG | + | chr7_2:67198493-67198512 | None:intergenic | 35.0% | |
| ! | ATTAAGAAGTGCGTAATCTC+CGG | + | chr7_2:67198549-67198568 | None:intergenic | 35.0% |
| GAGATTACGCACTTCTTAAT+CGG | - | chr7_2:67198549-67198568 | Msa1070890:intron | 35.0% | |
| CTTTCGCCTGATAAAAAATC+CGG | - | chr7_2:67198575-67198594 | Msa1070890:intron | 35.0% | |
| ! | AGATCTTGAACTTTTCGAAC+AGG | - | chr7_2:67198694-67198713 | Msa1070890:CDS | 35.0% |
| ATCGGATAAGATATTGCAAG+CGG | - | chr7_2:67199230-67199249 | Msa1070890:intron | 35.0% | |
| CACATCAGCATCAGATTTAA+AGG | + | chr7_2:67199365-67199384 | None:intergenic | 35.0% | |
| CTTTAAATCTGATGCTGATG+TGG | - | chr7_2:67199363-67199382 | Msa1070890:CDS | 35.0% | |
| !! | ACAAGAAGGTGCTTATCAAT+GGG | - | chr7_2:67199405-67199424 | Msa1070890:CDS | 35.0% |
| TCCAATTCTATTCGTAGTAG+AGG | - | chr7_2:67199604-67199623 | Msa1070890:intron | 35.0% | |
| TCCTCTACTACGAATAGAAT+TGG | + | chr7_2:67199608-67199627 | None:intergenic | 35.0% | |
| TTCTATTCGTAGTAGAGGAA+TGG | - | chr7_2:67199609-67199628 | Msa1070890:CDS | 35.0% | |
| ! | TTCATTTAAGTTCCTACCAG+TGG | + | chr7_2:67199642-67199661 | None:intergenic | 35.0% |
| ACTGGTAGGAACTTAAATGA+AGG | - | chr7_2:67199641-67199660 | Msa1070890:CDS | 35.0% | |
| AGACATGATGAAAGTCATCT+TGG | - | chr7_2:67199714-67199733 | Msa1070890:CDS | 35.0% | |
| AAAACCATACAAGTGTTCCT+TGG | + | chr7_2:67199780-67199799 | None:intergenic | 35.0% | |
| ! | AACACTTGTATGGTTTTTGC+AGG | - | chr7_2:67199783-67199802 | Msa1070890:CDS | 35.0% |
| ATTCGTCTAATGTTTCAGTG+CGG | + | chr7_2:67200003-67200022 | None:intergenic | 35.0% | |
| ! | TATCTTGCGTTTTCACAAGA+GGG | + | chr7_2:67200161-67200180 | None:intergenic | 35.0% |
| ! | ATATCTTGCGTTTTCACAAG+AGG | + | chr7_2:67200162-67200181 | None:intergenic | 35.0% |
| !!! | TCCCTGTTTTGAAACTGTTA+TGG | + | chr7_2:67200228-67200247 | None:intergenic | 35.0% |
| TAACAGTTTCAAAACAGGGA+TGG | - | chr7_2:67200228-67200247 | Msa1070890:intron | 35.0% | |
| AACAGTTTCAAAACAGGGAT+GGG | - | chr7_2:67200229-67200248 | Msa1070890:intron | 35.0% | |
| ATGATGTGAAGTCTGAAGAA+CGG | - | chr7_2:67200421-67200440 | Msa1070890:intron | 35.0% | |
| ! | AAGAACGGCGTAAAACATTT+TGG | - | chr7_2:67200436-67200455 | Msa1070890:intron | 35.0% |
| !!! | CGTAAAACATTTTGGCTACT+TGG | - | chr7_2:67200444-67200463 | Msa1070890:intron | 35.0% |
| CATTCTAGTAATTGTTCCAC+TGG | - | chr7_2:67200573-67200592 | Msa1070890:intron | 35.0% | |
| TTGTTCCACTGGATGAATTT+CGG | - | chr7_2:67200584-67200603 | Msa1070890:intron | 35.0% | |
| ATCTTCGGAATCTAACAATC+AGG | + | chr7_2:67200758-67200777 | None:intergenic | 35.0% | |
| GTTATACCGGATATATTCTC+AGG | - | chr7_2:67201058-67201077 | Msa1070890:intron | 35.0% | |
| AAGCTACCTGAGAATATATC+CGG | + | chr7_2:67201067-67201086 | None:intergenic | 35.0% | |
| AGAAAAACCTGTGAACATAG+AGG | + | chr7_2:67201477-67201496 | None:intergenic | 35.0% | |
| !! | GCAGAGATTTTAAAGGTTTC+CGG | - | chr7_2:67201676-67201695 | Msa1070890:CDS | 35.0% |
| ! | CTTAAAGTTCTGATGACAAG+TGG | - | chr7_2:67201884-67201903 | Msa1070890:intron | 35.0% |
| TTAGGAACTTACAACTATGG+AGG | - | chr7_2:67201924-67201943 | Msa1070890:intron | 35.0% | |
| CTATGGAGGAAAGTCATTTA+AGG | - | chr7_2:67201938-67201957 | Msa1070890:intron | 35.0% | |
| CTTAAATGAATGCAAAAGCG+TGG | - | chr7_2:67201980-67201999 | Msa1070890:intron | 35.0% | |
| ! | ACACATATGAAGTGCACTTT+TGG | - | chr7_2:67202038-67202057 | Msa1070890:CDS | 35.0% |
| ! | ATATGAAGTGCACTTTTGGT+GGG | - | chr7_2:67202042-67202061 | Msa1070890:CDS | 35.0% |
| !! | TTGCCTCATTTTTCTTTGAC+CGG | - | chr7_2:67202108-67202127 | Msa1070890:intron | 35.0% |
| TTGCCATATTACTTGTTCAC+AGG | - | chr7_2:67202212-67202231 | Msa1070890:intron | 35.0% | |
| ACAAGATCCATGCAAAGATA+TGG | + | chr7_2:67202372-67202391 | None:intergenic | 35.0% | |
| CATCAACAAGCAATGTATAC+TGG | + | chr7_2:67202398-67202417 | None:intergenic | 35.0% | |
| ! | CAGTATACATTGCTTGTTGA+TGG | - | chr7_2:67202396-67202415 | Msa1070890:CDS | 35.0% |
| TATTGCTTTCACTTGTTTGC+AGG | - | chr7_2:67202505-67202524 | Msa1070890:CDS | 35.0% | |
| ATCTTGGAGCATGAAATTTG+TGG | - | chr7_2:67202676-67202695 | Msa1070890:exon | 35.0% | |
| TGGTGATCAGAAATTACTTC+AGG | - | chr7_2:67202720-67202739 | Msa1070890:five_prime_UTR | 35.0% | |
| ACTTCAGGCAAAATTGGAAT+TGG | - | chr7_2:67202735-67202754 | Msa1070890:five_prime_UTR | 35.0% | |
| GGCAAAATTGGAATTGGATA+TGG | - | chr7_2:67202741-67202760 | Msa1070890:five_prime_UTR | 35.0% | |
| !! | TGGATATGGGTCTATTTTTC+AGG | - | chr7_2:67202755-67202774 | Msa1070890:five_prime_UTR | 35.0% |
| GTGCATCTATATATCTTGTC+TGG | - | chr7_2:67202872-67202891 | Msa1070890:five_prime_UTR | 35.0% | |
| GTCTGGAAAGATGAACAAAA+TGG | - | chr7_2:67202889-67202908 | Msa1070890:five_prime_UTR | 35.0% | |
| GTGCGGGAAAAATGGTTAAA+TGG | + | chr7_2:67198110-67198129 | None:intergenic | 40.0% | |
| ATTTGTGTGTGCGGGAAAAA+TGG | + | chr7_2:67198118-67198137 | None:intergenic | 40.0% | |
| ! | TGATTGTGATTTGTGTGTGC+GGG | + | chr7_2:67198126-67198145 | None:intergenic | 40.0% |
| ! | GTGATTGTGATTTGTGTGTG+CGG | + | chr7_2:67198127-67198146 | None:intergenic | 40.0% |
| !! | CATTTTGGTGAATTCGGAGT+CGG | + | chr7_2:67198387-67198406 | None:intergenic | 40.0% |
| ! | AGTTGGACGTTTGAGCATTT+TGG | + | chr7_2:67198402-67198421 | None:intergenic | 40.0% |
| GATAAGATCTACAGATTCCG+TGG | - | chr7_2:67198440-67198459 | Msa1070890:exon | 40.0% | |
| CAAACGTGATGAGAAGGATA+GGG | + | chr7_2:67198487-67198506 | None:intergenic | 40.0% | |
| ACAAACGTGATGAGAAGGAT+AGG | + | chr7_2:67198488-67198507 | None:intergenic | 40.0% | |
| GAATCATAATTGGAGCTCGA+CGG | + | chr7_2:67198524-67198543 | None:intergenic | 40.0% | |
| AGCTCCAATTATGATTCTGC+CGG | - | chr7_2:67198527-67198546 | Msa1070890:CDS | 40.0% | |
| ATCTCCGGCAGAATCATAAT+TGG | + | chr7_2:67198534-67198553 | None:intergenic | 40.0% | |
| AATAACAGCATAAGAGCCAC+CGG | + | chr7_2:67198597-67198616 | None:intergenic | 40.0% | |
| ! | ATTTTTGATGCTGGTAGCTC+TGG | - | chr7_2:67198614-67198633 | Msa1070890:intron | 40.0% |
| !!! | GGGTGTGTGGTTTTGTTTTT+TGG | - | chr7_2:67199099-67199118 | Msa1070890:CDS | 40.0% |
| !! | CACAAGAAGGTGCTTATCAA+TGG | - | chr7_2:67199404-67199423 | Msa1070890:CDS | 40.0% |
| ! | GTTTTCTTATTGCGTGCTCA+TGG | - | chr7_2:67199467-67199486 | Msa1070890:intron | 40.0% |
| TTAGAATGCATCCTGACTAG+AGG | - | chr7_2:67199532-67199551 | Msa1070890:intron | 40.0% | |
| ! | TTTAAGTTCCTACCAGTGGT+GGG | + | chr7_2:67199638-67199657 | None:intergenic | 40.0% |
| ! | ATTTAAGTTCCTACCAGTGG+TGG | + | chr7_2:67199639-67199658 | None:intergenic | 40.0% |
| CATGTCTCATATTTACAGGG+AGG | + | chr7_2:67199701-67199720 | None:intergenic | 40.0% | |
| TAAGAATATCTTCTGGGCTC+TGG | - | chr7_2:67199870-67199889 | Msa1070890:intron | 40.0% | |
| TTCAAAACAGGGATGGGTAA+TGG | - | chr7_2:67200235-67200254 | Msa1070890:intron | 40.0% | |
| TATTTACCGGTGTGAATTGG+TGG | + | chr7_2:67201097-67201116 | None:intergenic | 40.0% | |
| TAACTACCTATTGGGGAACT+TGG | - | chr7_2:67201291-67201310 | Msa1070890:intron | 40.0% | |
| AACTACCTATTGGGGAACTT+GGG | - | chr7_2:67201292-67201311 | Msa1070890:intron | 40.0% | |
| AGGAACATCTCCTTGACATA+TGG | + | chr7_2:67201436-67201455 | None:intergenic | 40.0% | |
| ! | GGTAATATTTTCTTCCCCTG+AGG | + | chr7_2:67201456-67201475 | None:intergenic | 40.0% |
| ATAGCATTAACTCATGGACC+TGG | - | chr7_2:67201555-67201574 | Msa1070890:intron | 40.0% | |
| ACTGCAAAGTGTAAGTATCC+AGG | + | chr7_2:67201576-67201595 | None:intergenic | 40.0% | |
| ! | AGCTCGTGCAGAGATTTTAA+AGG | - | chr7_2:67201669-67201688 | Msa1070890:CDS | 40.0% |
| GAAAACCCGTGTATCTTATC+TGG | - | chr7_2:67201706-67201725 | Msa1070890:CDS | 40.0% | |
| TCAGAGCCAGATAAGATACA+CGG | + | chr7_2:67201715-67201734 | None:intergenic | 40.0% | |
| !! | TGTATCTTATCTGGCTCTGA+TGG | - | chr7_2:67201715-67201734 | Msa1070890:CDS | 40.0% |
| CAACTCAATCAAAACAGTGC+CGG | + | chr7_2:67201775-67201794 | None:intergenic | 40.0% | |
| ! | TCATTTAAGGCTTCATCCTC+TGG | - | chr7_2:67201951-67201970 | Msa1070890:intron | 40.0% |
| ! | TTCATTTAAGCTTGCTCCAG+AGG | + | chr7_2:67201970-67201989 | None:intergenic | 40.0% |
| ! | CATATGAAGTGCACTTTTGG+TGG | - | chr7_2:67202041-67202060 | Msa1070890:CDS | 40.0% |
| ! | ACTTTTGGTGGGATATGGAA+TGG | - | chr7_2:67202053-67202072 | Msa1070890:CDS | 40.0% |
| !! | TGCCTCATTTTTCTTTGACC+GGG | - | chr7_2:67202109-67202128 | Msa1070890:intron | 40.0% |
| AAATAAATACCTCAGCAGCC+CGG | + | chr7_2:67202130-67202149 | None:intergenic | 40.0% | |
| CAGCCTGTGAACAAGTAATA+TGG | + | chr7_2:67202218-67202237 | None:intergenic | 40.0% | |
| CATATTACTTGTTCACAGGC+TGG | - | chr7_2:67202216-67202235 | Msa1070890:intron | 40.0% | |
| ACAATTGCAACTGGTGAGTT+TGG | + | chr7_2:67202252-67202271 | None:intergenic | 40.0% | |
| !!! | TGGCATTCTCGAGTTTTGTT+TGG | + | chr7_2:67202314-67202333 | None:intergenic | 40.0% |
| ! | AACTCGTGGATAAGTGGATT+TGG | + | chr7_2:67202334-67202353 | None:intergenic | 40.0% |
| ! | ACTTATCCACGAGTTGAAGA+GGG | - | chr7_2:67202339-67202358 | Msa1070890:intron | 40.0% |
| GAACCTTCCATATCTTTGCA+TGG | - | chr7_2:67202362-67202381 | Msa1070890:intron | 40.0% | |
| GATCCATGCAAAGATATGGA+AGG | + | chr7_2:67202368-67202387 | None:intergenic | 40.0% | |
| !! | ACATTGCTTGTTGATGGGTT+TGG | - | chr7_2:67202402-67202421 | Msa1070890:CDS | 40.0% |
| CAAGTGAAAGCAATAAGCGT+AGG | + | chr7_2:67202500-67202519 | None:intergenic | 40.0% | |
| TGTTTGCAGGCATATATCCA+TGG | - | chr7_2:67202518-67202537 | Msa1070890:CDS | 40.0% | |
| TCCATGGCAAGAGATTACAT+TGG | - | chr7_2:67202534-67202553 | Msa1070890:CDS | 40.0% | |
| ACCAATGTAATCTCTTGCCA+TGG | + | chr7_2:67202538-67202557 | None:intergenic | 40.0% | |
| CGTAGATGATACTGCTTCAA+TGG | + | chr7_2:67202617-67202636 | None:intergenic | 40.0% | |
| TTCTGATCACCATGAATGAC+AGG | + | chr7_2:67202712-67202731 | None:intergenic | 40.0% | |
| !! | GCATCTGGGACTAATGATTT+TGG | - | chr7_2:67202995-67203014 | Msa1070890:five_prime_UTR | 40.0% |
| GGTGGAGCCTGATATTGTTT+GGG | + | chr7_2:67198260-67198279 | None:intergenic | 45.0% | |
| AGGTGGAGCCTGATATTGTT+TGG | + | chr7_2:67198261-67198280 | None:intergenic | 45.0% | |
| !! | AGGAGGAGAAGTGGATTGAA+CGG | + | chr7_2:67198348-67198367 | None:intergenic | 45.0% |
| !! | AGACAACAAGAAGAGTGCCA+CGG | + | chr7_2:67198460-67198479 | None:intergenic | 45.0% |
| TCGCCTGATAAAAAATCCGG+TGG | - | chr7_2:67198578-67198597 | Msa1070890:intron | 45.0% | |
| !!! | GAGCCACCGGATTTTTTATC+AGG | + | chr7_2:67198584-67198603 | None:intergenic | 45.0% |
| ! | CGTGTTTTGCAGCTTAAACC+TGG | - | chr7_2:67198960-67198979 | Msa1070890:CDS | 45.0% |
| !! | GGAATCTCTGGTTTCCCTTT+TGG | - | chr7_2:67199019-67199038 | Msa1070890:CDS | 45.0% |
| !! | GGTTTCCCTTTTGGAGAAAG+CGG | - | chr7_2:67199028-67199047 | Msa1070890:CDS | 45.0% |
| TCAAAGACACCTGTTCGAGT+TGG | - | chr7_2:67199077-67199096 | Msa1070890:CDS | 45.0% | |
| ! | CAAAGACACCTGTTCGAGTT+GGG | - | chr7_2:67199078-67199097 | Msa1070890:CDS | 45.0% |
| !! | AAAGACACCTGTTCGAGTTG+GGG | - | chr7_2:67199079-67199098 | Msa1070890:CDS | 45.0% |
| AACTGCAGGTTTAAGGGCTT+TGG | - | chr7_2:67199197-67199216 | Msa1070890:intron | 45.0% | |
| !! | CAGGTTTAAGGGCTTTGGAA+GGG | - | chr7_2:67199202-67199221 | Msa1070890:intron | 45.0% |
| !! | AGGTTTAAGGGCTTTGGAAG+GGG | - | chr7_2:67199203-67199222 | Msa1070890:intron | 45.0% |
| TGCTGATGTGGTTACAGTGT+TGG | - | chr7_2:67199375-67199394 | Msa1070890:CDS | 45.0% | |
| ! | GATGTGGTTACAGTGTTGGA+TGG | - | chr7_2:67199379-67199398 | Msa1070890:CDS | 45.0% |
| GTGTTGGATGGAACACAAGA+AGG | - | chr7_2:67199391-67199410 | Msa1070890:CDS | 45.0% | |
| TCGTCAATTCTCCTCTAGTC+AGG | + | chr7_2:67199546-67199565 | None:intergenic | 45.0% | |
| GACTCCAAGGAACACTTGTA+TGG | - | chr7_2:67199773-67199792 | Msa1070890:CDS | 45.0% | |
| ! | TTGCGTTTTCACAAGAGGGT+CGG | + | chr7_2:67200157-67200176 | None:intergenic | 45.0% |
| GTCATAATGCTGTTCTTCGG+AGG | + | chr7_2:67200639-67200658 | None:intergenic | 45.0% | |
| ! | CTTTTCCCAAGTTCCCCAAT+AGG | + | chr7_2:67201300-67201319 | None:intergenic | 45.0% |
| ACTGTTGGGGTAGTTGATCT+TGG | - | chr7_2:67201331-67201350 | Msa1070890:intron | 45.0% | |
| ! | ATCTGTTACTTGTGGAGCCA+TGG | + | chr7_2:67201404-67201423 | None:intergenic | 45.0% |
| ATGGCTCCACAAGTAACAGA+TGG | - | chr7_2:67201403-67201422 | Msa1070890:intron | 45.0% | |
| TCCACAAGTAACAGATGGAG+AGG | - | chr7_2:67201408-67201427 | Msa1070890:intron | 45.0% | |
| ! | TCCTCTCCATCTGTTACTTG+TGG | + | chr7_2:67201412-67201431 | None:intergenic | 45.0% |
| TGGAGAGGATCCATATGTCA+AGG | - | chr7_2:67201423-67201442 | Msa1070890:intron | 45.0% | |
| ATGTCAAGGAGATGTTCCTC+AGG | - | chr7_2:67201437-67201456 | Msa1070890:intron | 45.0% | |
| TGTCAAGGAGATGTTCCTCA+GGG | - | chr7_2:67201438-67201457 | Msa1070890:intron | 45.0% | |
| CAGAGCCAGATAAGATACAC+GGG | + | chr7_2:67201714-67201733 | None:intergenic | 45.0% | |
| ! | AGTGCACTTTTGGTGGGATA+TGG | - | chr7_2:67202048-67202067 | Msa1070890:CDS | 45.0% |
| TTTGGTGGGATATGGAATGG+TGG | - | chr7_2:67202056-67202075 | Msa1070890:CDS | 45.0% | |
| AGCCCGGTCAAAGAAAAATG+AGG | + | chr7_2:67202114-67202133 | None:intergenic | 45.0% | |
| AGTTGCAATTGTTCGTCCTG+CGG | - | chr7_2:67202260-67202279 | Msa1070890:intron | 45.0% | |
| !! | TTTTGTTTGGCAAGCCTGCT+TGG | + | chr7_2:67202301-67202320 | None:intergenic | 45.0% |
| CTCTTCAACTCGTGGATAAG+TGG | + | chr7_2:67202340-67202359 | None:intergenic | 45.0% | |
| ! | CACTTATCCACGAGTTGAAG+AGG | - | chr7_2:67202338-67202357 | Msa1070890:intron | 45.0% |
| ! | CTTATCCACGAGTTGAAGAG+GGG | - | chr7_2:67202340-67202359 | Msa1070890:intron | 45.0% |
| !! | TGCTTGTTGATGGGTTTGGT+AGG | - | chr7_2:67202406-67202425 | Msa1070890:CDS | 45.0% |
| GAAACACTGCCTGTCATTCA+TGG | - | chr7_2:67202700-67202719 | Msa1070890:five_prime_UTR | 45.0% | |
| ! | TCTCATCTTGTTGTGGCATC+TGG | - | chr7_2:67202980-67202999 | Msa1070890:five_prime_UTR | 45.0% |
| ! | CTCATCTTGTTGTGGCATCT+GGG | - | chr7_2:67202981-67203000 | Msa1070890:five_prime_UTR | 45.0% |
| !!! | ATATAAAAAGTATAATTATT+CGG | + | chr7_2:67201849-67201868 | None:intergenic | 5.0% |
| TGAAACGACGTCGTGTAGTG+TGG | + | chr7_2:67198195-67198214 | None:intergenic | 50.0% | |
| !! | AGGAGAAGTGGATTGAACGG+CGG | + | chr7_2:67198345-67198364 | None:intergenic | 50.0% |
| GTTATCGGAAGGAGGAGAAG+TGG | + | chr7_2:67198357-67198376 | None:intergenic | 50.0% | |
| TTTGGTGAATTCGGAGTCGG+AGG | + | chr7_2:67198384-67198403 | None:intergenic | 50.0% | |
| TGAGCATACGCACTCAAACC+AGG | + | chr7_2:67198981-67199000 | None:intergenic | 50.0% | |
| TCAGAAACCACAGCAAGCAG+CGG | - | chr7_2:67198998-67199017 | Msa1070890:CDS | 50.0% | |
| !! | TTCCCTTTTGGAGAAAGCGG+AGG | - | chr7_2:67199031-67199050 | Msa1070890:CDS | 50.0% |
| !! | TCCCTTTTGGAGAAAGCGGA+GGG | - | chr7_2:67199032-67199051 | Msa1070890:CDS | 50.0% |
| ACCCTCCGCTTTCTCCAAAA+GGG | + | chr7_2:67199036-67199055 | None:intergenic | 50.0% | |
| GTCTTTGATCGCAATTCCCG+TGG | + | chr7_2:67199065-67199084 | None:intergenic | 50.0% | |
| TGCAGGCAACTGCAGGTTTA+AGG | - | chr7_2:67199190-67199209 | Msa1070890:intron | 50.0% | |
| GCAGGCAACTGCAGGTTTAA+GGG | - | chr7_2:67199191-67199210 | Msa1070890:intron | 50.0% | |
| !! | GCAGGTTTAAGGGCTTTGGA+AGG | - | chr7_2:67199201-67199220 | Msa1070890:intron | 50.0% |
| AATGGTTTCCCACCACTGGT+AGG | - | chr7_2:67199627-67199646 | Msa1070890:CDS | 50.0% | |
| ! | CTGGGCTCTGGTCAACTTAA+AGG | - | chr7_2:67199882-67199901 | Msa1070890:intron | 50.0% |
| TGACGCCGAAATTCATCCAG+TGG | + | chr7_2:67200592-67200611 | None:intergenic | 50.0% | |
| TCCTAGCCACCAATTCACAC+CGG | - | chr7_2:67201088-67201107 | Msa1070890:intron | 50.0% | |
| GTTGGGGTAGTTGATCTTGG+AGG | - | chr7_2:67201334-67201353 | Msa1070890:intron | 50.0% | |
| TGGAGGTGGATCTGTTCAGA+TGG | - | chr7_2:67201351-67201370 | Msa1070890:intron | 50.0% | |
| GTCAAGGAGATGTTCCTCAG+GGG | - | chr7_2:67201439-67201458 | Msa1070890:intron | 50.0% | |
| GCTCTCAGTTACTTGCGCTA+TGG | - | chr7_2:67201637-67201656 | Msa1070890:intron | 50.0% | |
| ! | ACACGGGTTTTCAGCATCAC+CGG | + | chr7_2:67201698-67201717 | None:intergenic | 50.0% |
| !! | TCAATCAAAACAGTGCCGGC+TGG | + | chr7_2:67201771-67201790 | None:intergenic | 50.0% |
| ! | ATGCAAAAGCGTGGCTCACA+AGG | - | chr7_2:67201989-67202008 | Msa1070890:intron | 50.0% |
| ! | GGATATGGAATGGTGGAGGT+GGG | - | chr7_2:67202063-67202082 | Msa1070890:CDS | 50.0% |
| ! | GATATGGAATGGTGGAGGTG+GGG | - | chr7_2:67202064-67202083 | Msa1070890:CDS | 50.0% |
| GCAGGACGAACAATTGCAAC+TGG | + | chr7_2:67202261-67202280 | None:intergenic | 50.0% | |
| ! | TGTTCGTCCTGCGGATTTTG+AGG | - | chr7_2:67202269-67202288 | Msa1070890:intron | 50.0% |
| !! | TTTTGAGGATGCTGCCAAGC+AGG | - | chr7_2:67202284-67202303 | Msa1070890:intron | 50.0% |
| CGACGTCGTGTAGTGTGGTT+TGG | + | chr7_2:67198190-67198209 | None:intergenic | 55.0% | |
| GGATCCAGCTCTGTGTCTTG+GGG | + | chr7_2:67198227-67198246 | None:intergenic | 55.0% | |
| GGGATCCAGCTCTGTGTCTT+GGG | + | chr7_2:67198228-67198247 | None:intergenic | 55.0% | |
| AGGGATCCAGCTCTGTGTCT+TGG | + | chr7_2:67198229-67198248 | None:intergenic | 55.0% | |
| !! | ATCGGTAACGGATCTGACCG+TGG | + | chr7_2:67198301-67198320 | None:intergenic | 55.0% |
| CGGAGGAAGGTGATCGGTAA+CGG | + | chr7_2:67198313-67198332 | None:intergenic | 55.0% | |
| GGATTGAACGGCGGAGAGTT+CGG | + | chr7_2:67198336-67198355 | None:intergenic | 55.0% | |
| GAGGAGTGGTTATCGGAAGG+AGG | + | chr7_2:67198365-67198384 | None:intergenic | 55.0% | |
| TCGGAGGAGTGGTTATCGGA+AGG | + | chr7_2:67198368-67198387 | None:intergenic | 55.0% | |
| GGAGTCGGAGGAGTGGTTAT+CGG | + | chr7_2:67198372-67198391 | None:intergenic | 55.0% | |
| TGAATTCGGAGTCGGAGGAG+TGG | + | chr7_2:67198379-67198398 | None:intergenic | 55.0% | |
| GCTCAAACGTCCAACTCGTC+AGG | - | chr7_2:67198406-67198425 | Msa1070890:three_prime_UTR | 55.0% | |
| GAGAGTGACTCCTGACGAGT+TGG | + | chr7_2:67198419-67198438 | None:intergenic | 55.0% | |
| ! | AGAGATTCCGCTGCTTGCTG+TGG | + | chr7_2:67199008-67199027 | None:intergenic | 55.0% |
| ACAGCAAGCAGCGGAATCTC+TGG | - | chr7_2:67199007-67199026 | Msa1070890:CDS | 55.0% | |
| CACCCTCCGCTTTCTCCAAA+AGG | + | chr7_2:67199037-67199056 | None:intergenic | 55.0% | |
| !! | AAGCGGAGGGTGTTGTTCCA+CGG | - | chr7_2:67199045-67199064 | Msa1070890:CDS | 55.0% |
| !! | TTGGTGATGCAGGCAACTGC+AGG | - | chr7_2:67199183-67199202 | Msa1070890:intron | 55.0% |
| !! | GGCTTTGGAAGGGGATGCAT+CGG | - | chr7_2:67199212-67199231 | Msa1070890:intron | 55.0% |
| GAGGAATGGTTTCCCACCAC+TGG | - | chr7_2:67199623-67199642 | Msa1070890:CDS | 55.0% | |
| ! | ACCGGTGTGAATTGGTGGCT+AGG | + | chr7_2:67201092-67201111 | None:intergenic | 55.0% |
| GGGGTAGTTGATCTTGGAGG+TGG | - | chr7_2:67201337-67201356 | Msa1070890:intron | 55.0% | |
| GGCAGCATCAGACTCAGAGA+TGG | + | chr7_2:67201383-67201402 | None:intergenic | 55.0% | |
| CTCTGAGTCTGATGCTGCCA+TGG | - | chr7_2:67201384-67201403 | Msa1070890:intron | 55.0% | |
| GGTGGGATATGGAATGGTGG+AGG | - | chr7_2:67202059-67202078 | Msa1070890:CDS | 55.0% | |
| ! | GGGATATGGAATGGTGGAGG+TGG | - | chr7_2:67202062-67202081 | Msa1070890:CDS | 55.0% |
| TTTCTTTGACCGGGCTGCTG+AGG | - | chr7_2:67202118-67202137 | Msa1070890:intron | 55.0% | |
| GCAGCATCCTCAAAATCCGC+AGG | + | chr7_2:67202279-67202298 | None:intergenic | 55.0% | |
| AGGTTCCCCTCTTCAACTCG+TGG | + | chr7_2:67202348-67202367 | None:intergenic | 55.0% | |
| ATACGACGATGCCCTTGTCG+AGG | - | chr7_2:67202570-67202589 | Msa1070890:CDS | 55.0% | |
| GCTTCAATGGCGCTTCCTAG+CGG | + | chr7_2:67202604-67202623 | None:intergenic | 55.0% | |
| CCAGCTCTGTGTCTTGGGGA+TGG | + | chr7_2:67198223-67198242 | None:intergenic | 60.0% | |
| CCATCCCCAAGACACAGAGC+TGG | - | chr7_2:67198220-67198239 | Msa1070890:three_prime_UTR | 60.0% | |
| CCACCTGCCACCACATCCAA+CGG | - | chr7_2:67198275-67198294 | Msa1070890:three_prime_UTR | 60.0% | |
| GTTCGGCGGAGGAAGGTGAT+CGG | + | chr7_2:67198319-67198338 | None:intergenic | 60.0% | |
| TTGAACGGCGGAGAGTTCGG+CGG | + | chr7_2:67198333-67198352 | None:intergenic | 60.0% | |
| !! | AGCGGAGGGTGTTGTTCCAC+GGG | - | chr7_2:67199046-67199065 | Msa1070890:CDS | 60.0% |
| CCACACACCCCAACTCGAAC+AGG | + | chr7_2:67199089-67199108 | None:intergenic | 60.0% | |
| !! | CCTGTTCGAGTTGGGGTGTG+TGG | - | chr7_2:67199086-67199105 | Msa1070890:CDS | 60.0% |
| CTCTCTGTATCCCTGCCAGC+CGG | - | chr7_2:67201753-67201772 | Msa1070890:intron | 60.0% | |
| !! | CAAAACAGTGCCGGCTGGCA+GGG | + | chr7_2:67201766-67201785 | None:intergenic | 60.0% |
| !! | TCAAAACAGTGCCGGCTGGC+AGG | + | chr7_2:67201767-67201786 | None:intergenic | 60.0% |
| ! | TGGAATGGTGGAGGTGGGGA+TGG | - | chr7_2:67202068-67202087 | Msa1070890:CDS | 60.0% |
| ATGCCCTTGTCGAGGCAGCT+TGG | - | chr7_2:67202578-67202597 | Msa1070890:CDS | 60.0% | |
| CCGTTGGATGTGGTGGCAGG+TGG | + | chr7_2:67198278-67198297 | None:intergenic | 65.0% | |
| TGGCCGTTGGATGTGGTGGC+AGG | + | chr7_2:67198281-67198300 | None:intergenic | 65.0% | |
| GCCACCACATCCAACGGCCA+CGG | - | chr7_2:67198281-67198300 | Msa1070890:three_prime_UTR | 65.0% | |
| ACCGTGGCCGTTGGATGTGG+TGG | + | chr7_2:67198285-67198304 | None:intergenic | 65.0% | |
| CTGACCGTGGCCGTTGGATG+TGG | + | chr7_2:67198288-67198307 | None:intergenic | 65.0% | |
| ACGGATCTGACCGTGGCCGT+TGG | + | chr7_2:67198294-67198313 | None:intergenic | 65.0% | |
| CGGCTGGCAGGGATACAGAG+AGG | + | chr7_2:67201755-67201774 | None:intergenic | 65.0% | |
| CGGCCAAGCTGCCTCGACAA+GGG | + | chr7_2:67202584-67202603 | None:intergenic | 65.0% | |
| GCGGAGAGTTCGGCGGAGGA+AGG | + | chr7_2:67198326-67198345 | None:intergenic | 70.0% | |
| AACGGCGGAGAGTTCGGCGG+AGG | + | chr7_2:67198330-67198349 | None:intergenic | 70.0% | |
| GCGGCCAAGCTGCCTCGACA+AGG | + | chr7_2:67202585-67202604 | None:intergenic | 70.0% | |
| GTCGAGGCAGCTTGGCCGCT+AGG | - | chr7_2:67202586-67202605 | Msa1070890:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 67197913 | 67203180 | 67197913 | ID=Msa1070890;Name=Msa1070890 |
| chr7_2 | mRNA | 67197913 | 67203180 | 67197913 | ID=Msa1070890-mRNA-1;Parent=Msa1070890;Name=Msa1070890-mRNA-1;_AED=0.08;_eAED=0.08;_QI=462|1|1|1|0.88|0.8|10|541|467 |
| chr7_2 | exon | 67197913 | 67198566 | 67197913 | ID=Msa1070890-mRNA-1:exon:14571;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67198670 | 67198859 | 67198670 | ID=Msa1070890-mRNA-1:exon:14570;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67198954 | 67199165 | 67198954 | ID=Msa1070890-mRNA-1:exon:14569;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67199357 | 67199448 | 67199357 | ID=Msa1070890-mRNA-1:exon:14568;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67199605 | 67199810 | 67199605 | ID=Msa1070890-mRNA-1:exon:14567;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67201667 | 67201759 | 67201667 | ID=Msa1070890-mRNA-1:exon:14566;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67201842 | 67201898 | 67201842 | ID=Msa1070890-mRNA-1:exon:14565;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67201993 | 67202121 | 67201993 | ID=Msa1070890-mRNA-1:exon:14564;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67202378 | 67203101 | 67202378 | ID=Msa1070890-mRNA-1:exon:14563;Parent=Msa1070890-mRNA-1 |
| chr7_2 | exon | 67203131 | 67203180 | 67203131 | ID=Msa1070890-mRNA-1:exon:14562;Parent=Msa1070890-mRNA-1 |
| chr7_2 | five_prime_UTR | 67203131 | 67203180 | 67203131 | ID=Msa1070890-mRNA-1:five_prime_utr;Parent=Msa1070890-mRNA-1 |
| chr7_2 | five_prime_UTR | 67202690 | 67203101 | 67202690 | ID=Msa1070890-mRNA-1:five_prime_utr;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67202378 | 67202689 | 67202378 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67201993 | 67202121 | 67201993 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67201842 | 67201898 | 67201842 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67201667 | 67201759 | 67201667 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67199605 | 67199810 | 67199605 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67199357 | 67199448 | 67199357 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67198954 | 67199165 | 67198954 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67198670 | 67198859 | 67198670 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | CDS | 67198454 | 67198566 | 67198454 | ID=Msa1070890-mRNA-1:cds;Parent=Msa1070890-mRNA-1 |
| chr7_2 | three_prime_UTR | 67197913 | 67198453 | 67197913 | ID=Msa1070890-mRNA-1:three_prime_utr;Parent=Msa1070890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
