Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031390 | XP_003624579.2 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031390 | sp|Q9SPM5|APY2_ARATH | 72.354 | 463 | 125 | 2 | 7 | 466 | 9 | 471 | 0.0 | 642 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031390 | Q84UD8 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa1031390 | 0.827530 | 1.486956e-54 | -8.615850e-47 |
Msa0012940 | Msa1031390 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
Msa0016540 | Msa1031390 | 0.852979 | 3.235755e-61 | -8.615850e-47 |
Msa0032020 | Msa1031390 | 0.833046 | 6.675651e-56 | -8.615850e-47 |
Msa0036890 | Msa1031390 | 0.815970 | 7.035042e-52 | -8.615850e-47 |
Msa0041690 | Msa1031390 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
Msa0047640 | Msa1031390 | 0.842026 | 3.323623e-58 | -8.615850e-47 |
Msa0052870 | Msa1031390 | 0.843294 | 1.530633e-58 | -8.615850e-47 |
Msa0062350 | Msa1031390 | 0.842059 | 3.258009e-58 | -8.615850e-47 |
Msa0069600 | Msa1031390 | 0.832364 | 9.861769e-56 | -8.615850e-47 |
Msa0084970 | Msa1031390 | 0.820774 | 5.742366e-53 | -8.615850e-47 |
Msa0089980 | Msa1031390 | 0.819209 | 1.309840e-52 | -8.615850e-47 |
Msa0090010 | Msa1031390 | 0.813692 | 2.250218e-51 | -8.615850e-47 |
Msa0092940 | Msa1031390 | 0.808858 | 2.519119e-50 | -8.615850e-47 |
Msa0106620 | Msa1031390 | 0.806269 | 8.928629e-50 | -8.615850e-47 |
Msa0116790 | Msa1031390 | 0.843408 | 1.427327e-58 | -8.615850e-47 |
Msa0608270 | Msa1031390 | 0.824124 | 9.564545e-54 | -8.615850e-47 |
Msa0619420 | Msa1031390 | 0.803038 | 4.217545e-49 | -8.615850e-47 |
Msa0622470 | Msa1031390 | 0.803027 | 4.239866e-49 | -8.615850e-47 |
Msa0626270 | Msa1031390 | 0.871420 | 6.930901e-67 | -8.615850e-47 |
Msa0626460 | Msa1031390 | 0.877063 | 8.483443e-69 | -8.615850e-47 |
Msa0630940 | Msa1031390 | 0.860131 | 2.557724e-63 | -8.615850e-47 |
Msa0648830 | Msa1031390 | 0.824725 | 6.907747e-54 | -8.615850e-47 |
Msa0650830 | Msa1031390 | 0.816287 | 5.977987e-52 | -8.615850e-47 |
Msa0659550 | Msa1031390 | 0.813383 | 2.632155e-51 | -8.615850e-47 |
Msa0664540 | Msa1031390 | 0.867504 | 1.303662e-65 | -8.615850e-47 |
Msa0669180 | Msa1031390 | 0.858831 | 6.286749e-63 | -8.615850e-47 |
Msa0689760 | Msa1031390 | 0.805313 | 1.417779e-49 | -8.615850e-47 |
Msa0692880 | Msa1031390 | 0.836490 | 9.078133e-57 | -8.615850e-47 |
Msa0698100 | Msa1031390 | 0.854116 | 1.524983e-61 | -8.615850e-47 |
Msa0702720 | Msa1031390 | 0.807491 | 4.926031e-50 | -8.615850e-47 |
Msa0705940 | Msa1031390 | 0.801103 | 1.054498e-48 | -8.615850e-47 |
Msa0706760 | Msa1031390 | 0.821899 | 3.158775e-53 | -8.615850e-47 |
Msa0716860 | Msa1031390 | 0.812527 | 4.053183e-51 | -8.615850e-47 |
Msa0756620 | Msa1031390 | 0.813307 | 2.735072e-51 | -8.615850e-47 |
Msa0790410 | Msa1031390 | 0.810948 | 8.941942e-51 | -8.615850e-47 |
Msa0826510 | Msa1031390 | 0.840784 | 7.055971e-58 | -8.615850e-47 |
Msa0128360 | Msa1031390 | 0.819248 | 1.283299e-52 | -8.615850e-47 |
Msa0130110 | Msa1031390 | 0.805778 | 1.132699e-49 | -8.615850e-47 |
Msa0133820 | Msa1031390 | 0.807683 | 4.484394e-50 | -8.615850e-47 |
Msa0138360 | Msa1031390 | 0.818850 | 1.580719e-52 | -8.615850e-47 |
Msa0140880 | Msa1031390 | 0.847992 | 8.137871e-60 | -8.615850e-47 |
Msa0141400 | Msa1031390 | 0.820928 | 5.292923e-53 | -8.615850e-47 |
Msa0142410 | Msa1031390 | 0.801818 | 7.524268e-49 | -8.615850e-47 |
Msa0168090 | Msa1031390 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
Msa0176900 | Msa1031390 | 0.835142 | 1.993237e-56 | -8.615850e-47 |
Msa0178050 | Msa1031390 | 0.811998 | 5.287507e-51 | -8.615850e-47 |
Msa0178120 | Msa1031390 | 0.800947 | 1.134924e-48 | -8.615850e-47 |
Msa0186410 | Msa1031390 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
Msa0188700 | Msa1031390 | 0.828626 | 8.098983e-55 | -8.615850e-47 |
Msa0194860 | Msa1031390 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
Msa0194890 | Msa1031390 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
Msa0209140 | Msa1031390 | 0.845179 | 4.772159e-59 | -8.615850e-47 |
Msa0218040 | Msa1031390 | 0.826268 | 2.977888e-54 | -8.615850e-47 |
Msa0225480 | Msa1031390 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
Msa0229920 | Msa1031390 | 0.824284 | 8.771800e-54 | -8.615850e-47 |
Msa0231190 | Msa1031390 | 0.815963 | 7.061064e-52 | -8.615850e-47 |
Msa0369420 | Msa1031390 | 0.816449 | 5.497976e-52 | -8.615850e-47 |
Msa0385310 | Msa1031390 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
Msa0402190 | Msa1031390 | 0.808469 | 3.049740e-50 | -8.615850e-47 |
Msa0428210 | Msa1031390 | 0.816622 | 5.029871e-52 | -8.615850e-47 |
Msa0430230 | Msa1031390 | 0.835339 | 1.777905e-56 | -8.615850e-47 |
Msa0477750 | Msa1031390 | 0.839982 | 1.143641e-57 | -8.615850e-47 |
Msa0479420 | Msa1031390 | 0.807651 | 4.555575e-50 | -8.615850e-47 |
Msa0984540 | Msa1031390 | 0.803360 | 3.617909e-49 | -8.615850e-47 |
Msa1031390 | Msa1055200 | 0.866877 | 2.067823e-65 | -8.615850e-47 |
Msa1031390 | Msa1070890 | 0.939856 | 6.281303e-100 | -8.615850e-47 |
Msa1031390 | Msa1072600 | 0.807589 | 4.695127e-50 | -8.615850e-47 |
Msa1031390 | Msa1076560 | 0.810001 | 1.432049e-50 | -8.615850e-47 |
Msa1031390 | Msa1085330 | 0.808634 | 2.812473e-50 | -8.615850e-47 |
Msa1031390 | Msa1095790 | 0.833300 | 5.774171e-56 | -8.615850e-47 |
Msa1031390 | Msa1101120 | 0.870703 | 1.194329e-66 | -8.615850e-47 |
Msa1031390 | Msa1165090 | 0.866607 | 2.519382e-65 | -8.615850e-47 |
Msa1031390 | Msa1207330 | 0.805030 | 1.625276e-49 | -8.615850e-47 |
Msa1031390 | Msa1219830 | 0.819313 | 1.239965e-52 | -8.615850e-47 |
Msa1031390 | Msa1234550 | 0.817187 | 3.755029e-52 | -8.615850e-47 |
Msa1031390 | Msa1259730 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
Msa1031390 | Msa1266330 | 0.802269 | 6.078103e-49 | -8.615850e-47 |
Msa1031390 | Msa1267040 | 0.819546 | 1.097201e-52 | -8.615850e-47 |
Msa1031390 | Msa1267170 | 0.818419 | 1.979610e-52 | -8.615850e-47 |
Msa1031390 | Msa1277080 | 0.807694 | 4.461159e-50 | -8.615850e-47 |
Msa1031390 | Msa1277390 | 0.800814 | 1.207742e-48 | -8.615850e-47 |
Msa1031390 | Msa1292020 | 0.802758 | 4.819846e-49 | -8.615850e-47 |
Msa1031390 | Msa1326240 | 0.820781 | 5.720465e-53 | -8.615850e-47 |
Msa1031390 | Msa1327870 | 0.806404 | 8.363415e-50 | -8.615850e-47 |
Msa1031390 | Msa1331300 | 0.815658 | 8.257230e-52 | -8.615850e-47 |
Msa1031390 | Msa1335160 | 0.813068 | 3.086660e-51 | -8.615850e-47 |
Msa1031390 | Msa1354200 | 0.823747 | 1.172937e-53 | -8.615850e-47 |
Msa1031390 | Msa1366550 | 0.822767 | 1.986496e-53 | -8.615850e-47 |
Msa1031390 | Msa1371520 | 0.822870 | 1.879480e-53 | -8.615850e-47 |
Msa1031390 | Msa1373170 | 0.874537 | 6.252217e-68 | -8.615850e-47 |
Msa1031390 | Msa1373820 | 0.829006 | 6.552344e-55 | -8.615850e-47 |
Msa1031390 | Msa1375110 | 0.801730 | 7.844428e-49 | -8.615850e-47 |
Msa1031390 | Msa1382710 | 0.815922 | 7.212839e-52 | -8.615850e-47 |
Msa1031390 | Msa1383820 | 0.817673 | 2.918296e-52 | -8.615850e-47 |
Msa1031390 | Msa1391480 | 0.801026 | 1.093333e-48 | -8.615850e-47 |
Msa1031390 | Msa1393820 | 0.843097 | 1.727772e-58 | -8.615850e-47 |
Msa1031390 | Msa1403560 | 0.837631 | 4.638654e-57 | -8.615850e-47 |
Msa1031390 | Msa1403570 | 0.829210 | 5.847010e-55 | -8.615850e-47 |
Msa1031390 | Msa1411000 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
Msa1031390 | Msa1411500 | 0.823365 | 1.440643e-53 | -8.615850e-47 |
Msa1031390 | Msa1418240 | 0.816423 | 5.573437e-52 | -8.615850e-47 |
Msa1031390 | Msa1420250 | 0.802676 | 5.011048e-49 | -8.615850e-47 |
Msa1031390 | Msa1427110 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
Msa1031390 | Msa1440900 | 0.835876 | 1.299617e-56 | -8.615850e-47 |
Msa1031390 | Msa1443310 | 0.821336 | 4.262536e-53 | -8.615850e-47 |
Msa1031390 | Msa1459460 | 0.832995 | 6.876435e-56 | -8.615850e-47 |
Msa1031390 | Msa1459910 | 0.849380 | 3.355589e-60 | -8.615850e-47 |
Msa1031390 | Msa1460880 | 0.806561 | 7.747765e-50 | -8.615850e-47 |
Msa1031390 | Msa1461370 | 0.825068 | 5.734628e-54 | -8.615850e-47 |
Msa1031390 | Msa1463030 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
Msa0241830 | Msa1031390 | 0.840033 | 1.109567e-57 | -8.615850e-47 |
Msa0258040 | Msa1031390 | 0.826598 | 2.484164e-54 | -8.615850e-47 |
Msa0268110 | Msa1031390 | 0.829224 | 5.801935e-55 | -8.615850e-47 |
Msa0270200 | Msa1031390 | 0.818643 | 1.760959e-52 | -8.615850e-47 |
Msa0270210 | Msa1031390 | 0.821313 | 4.314178e-53 | -8.615850e-47 |
Msa0273500 | Msa1031390 | 0.819615 | 1.058516e-52 | -8.615850e-47 |
Msa0279850 | Msa1031390 | 0.829424 | 5.187497e-55 | -8.615850e-47 |
Msa0291120 | Msa1031390 | 0.804098 | 2.542434e-49 | -8.615850e-47 |
Msa0299880 | Msa1031390 | 0.802657 | 5.057130e-49 | -8.615850e-47 |
Msa0301520 | Msa1031390 | 0.852104 | 5.743822e-61 | -8.615850e-47 |
Msa0307570 | Msa1031390 | 0.846528 | 2.053058e-59 | -8.615850e-47 |
Msa0307860 | Msa1031390 | 0.801823 | 7.506369e-49 | -8.615850e-47 |
Msa0313730 | Msa1031390 | 0.813021 | 3.160798e-51 | -8.615850e-47 |
Msa0322900 | Msa1031390 | 0.844335 | 8.058176e-59 | -8.615850e-47 |
Msa0323260 | Msa1031390 | 0.830335 | 3.112402e-55 | -8.615850e-47 |
Msa0326710 | Msa1031390 | 0.822802 | 1.949031e-53 | -8.615850e-47 |
Msa0339020 | Msa1031390 | 0.817871 | 2.633327e-52 | -8.615850e-47 |
Msa0485240 | Msa1031390 | 0.803962 | 2.714061e-49 | -8.615850e-47 |
Msa0508180 | Msa1031390 | 0.828454 | 8.908449e-55 | -8.615850e-47 |
Msa0511150 | Msa1031390 | 0.805891 | 1.072248e-49 | -8.615850e-47 |
Msa0518030 | Msa1031390 | 0.840762 | 7.153182e-58 | -8.615850e-47 |
Msa0519150 | Msa1031390 | 0.854548 | 1.144030e-61 | -8.615850e-47 |
Msa0519760 | Msa1031390 | 0.800954 | 1.130896e-48 | -8.615850e-47 |
Msa0519840 | Msa1031390 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
Msa0523110 | Msa1031390 | 0.805171 | 1.518490e-49 | -8.615850e-47 |
Msa0527190 | Msa1031390 | 0.806331 | 8.665257e-50 | -8.615850e-47 |
Msa0537760 | Msa1031390 | 0.808343 | 3.244922e-50 | -8.615850e-47 |
Msa0541850 | Msa1031390 | 0.801112 | 1.050130e-48 | -8.615850e-47 |
Msa0544730 | Msa1031390 | 0.819066 | 1.411263e-52 | -8.615850e-47 |
Msa0561410 | Msa1031390 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
Msa0572750 | Msa1031390 | 0.857840 | 1.240678e-62 | -8.615850e-47 |
Msa0581690 | Msa1031390 | 0.806133 | 9.537373e-50 | -8.615850e-47 |
Msa0583500 | Msa1031390 | 0.819739 | 9.915022e-53 | -8.615850e-47 |
Msa0586450 | Msa1031390 | 0.873051 | 1.984183e-67 | -8.615850e-47 |
Msa0590640 | Msa1031390 | 0.859958 | 2.883562e-63 | -8.615850e-47 |
Msa0597770 | Msa1031390 | 0.825177 | 5.402924e-54 | -8.615850e-47 |
Msa0865620 | Msa1031390 | 0.843283 | 1.540982e-58 | -8.615850e-47 |
Msa0881350 | Msa1031390 | 0.816895 | 4.367775e-52 | -8.615850e-47 |
Msa0960420 | Msa1031390 | 0.805030 | 1.625002e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031390 | MtrunA17_Chr7g0252861 | 98.287 | 467 | 8 | 0 | 1 | 467 | 1 | 467 | 0.0 | 947 |
Msa1031390 | MtrunA17_Chr6g0461671 | 77.412 | 456 | 101 | 1 | 13 | 466 | 26 | 481 | 0.0 | 674 |
Msa1031390 | MtrunA17_Chr4g0015031 | 61.312 | 442 | 166 | 4 | 29 | 466 | 15 | 455 | 0.0 | 546 |
Msa1031390 | MtrunA17_Chr7g0252891 | 59.594 | 443 | 173 | 5 | 29 | 466 | 26 | 467 | 0.0 | 526 |
Msa1031390 | MtrunA17_Chr7g0252921 | 58.864 | 440 | 178 | 2 | 29 | 466 | 5 | 443 | 0.0 | 520 |
Msa1031390 | MtrunA17_Chr7g0252911 | 55.814 | 430 | 187 | 2 | 39 | 466 | 16 | 444 | 2.53e-180 | 512 |
Msa1031390 | MtrunA17_Chr7g0252881 | 58.237 | 431 | 176 | 3 | 39 | 466 | 16 | 445 | 1.73e-177 | 505 |
Msa1031390 | MtrunA17_Chr7g0252941 | 52.000 | 175 | 81 | 2 | 266 | 438 | 6 | 179 | 1.71e-46 | 159 |
Msa1031390 | MtrunA17_Chr5g0417201 | 28.288 | 403 | 233 | 11 | 59 | 432 | 71 | 446 | 6.10e-36 | 139 |
Msa1031390 | MtrunA17_Chr7g0252901 | 52.326 | 86 | 41 | 0 | 373 | 458 | 4 | 89 | 1.09e-26 | 103 |
Msa1031390 | MtrunA17_Chr4g0058831 | 33.684 | 190 | 99 | 6 | 68 | 231 | 52 | 240 | 9.21e-21 | 95.1 |
Msa1031390 | MtrunA17_Chr8g0369851 | 26.277 | 274 | 158 | 10 | 59 | 299 | 93 | 355 | 5.39e-15 | 77.8 |
Msa1031390 | MtrunA17_Chr5g0407961 | 26.394 | 269 | 152 | 9 | 66 | 299 | 95 | 352 | 2.34e-12 | 69.3 |
Msa1031390 | MtrunA17_Chr7g0252931 | 46.269 | 67 | 32 | 2 | 207 | 273 | 11 | 73 | 3.49e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1031390 | AT5G18280.1 | 72.354 | 463 | 125 | 2 | 7 | 466 | 9 | 471 | 0.0 | 642 |
Msa1031390 | AT3G04080.1 | 71.429 | 462 | 130 | 1 | 7 | 466 | 9 | 470 | 0.0 | 629 |
Msa1031390 | AT1G14240.1 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
Msa1031390 | AT1G14240.4 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
Msa1031390 | AT1G14240.2 | 29.828 | 466 | 265 | 16 | 22 | 461 | 34 | 463 | 1.57e-44 | 162 |
Msa1031390 | AT1G14250.1 | 29.565 | 460 | 255 | 15 | 1 | 432 | 21 | 439 | 4.97e-43 | 159 |
Msa1031390 | AT1G14240.3 | 29.274 | 468 | 261 | 17 | 22 | 461 | 34 | 459 | 4.01e-41 | 153 |
Msa1031390 | AT1G14230.1 | 28.810 | 420 | 248 | 10 | 68 | 461 | 81 | 475 | 1.31e-40 | 152 |
Msa1031390 | AT2G02970.1 | 29.224 | 438 | 235 | 14 | 68 | 466 | 87 | 488 | 9.48e-39 | 148 |
Find 181 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTCATGCTCCAAGATTT+TGG | 0.134487 | 7_1:-65971932 | None:intergenic |
TCTCATCTTGTTGTGGCATC+TGG | 0.164470 | 7_1:+65972240 | Msa1031390:three_prime_UTR |
CTTTATACTTTATGTACTTT+TGG | 0.174635 | 7_1:-65967244 | None:intergenic |
GTATTATTATTGTGCAATTT+TGG | 0.177480 | 7_1:-65967159 | None:intergenic |
TTATGTAAACATTGTATAAA+AGG | 0.182292 | 7_1:-65967206 | None:intergenic |
TGCAGGCGACTGCAGGTTTA+AGG | 0.187101 | 7_1:+65968444 | Msa1031390:intron |
GGCAAAATTGGAATTGGATA+TGG | 0.187903 | 7_1:+65972002 | Msa1031390:three_prime_UTR |
GAAATTACTTCAGGCAAAAT+TGG | 0.206740 | 7_1:+65971990 | Msa1031390:three_prime_UTR |
TCTAAAGGAAAATTTATTAA+TGG | 0.234840 | 7_1:+65972359 | Msa1031390:three_prime_UTR |
CTATGGAGGAAAGTCATTTA+AGG | 0.236769 | 7_1:+65971198 | Msa1031390:CDS |
CACATCAGCATCAGATTTAA+AGG | 0.239604 | 7_1:-65968616 | None:intergenic |
AGTTGGACGTTTGAGCATTT+TGG | 0.261699 | 7_1:-65967648 | None:intergenic |
GGAATCTCTGGTTTCCCTTT+TGG | 0.264364 | 7_1:+65968273 | Msa1031390:CDS |
GTTACAATTAACTACCTATT+GGG | 0.279979 | 7_1:+65970543 | Msa1031390:CDS |
GGGATCCAGCTCTGTGTCTT+GGG | 0.287304 | 7_1:-65967474 | None:intergenic |
GCATCTGGGACTAATGATTT+TGG | 0.287558 | 7_1:+65972255 | Msa1031390:three_prime_UTR |
TTCTTAGGAACTTACAACTA+TGG | 0.307435 | 7_1:+65971181 | Msa1031390:intron |
ACAATTGCAACTGGTGAGTT+TGG | 0.313352 | 7_1:-65971509 | None:intergenic |
GGTTACAATTAACTACCTAT+TGG | 0.328895 | 7_1:+65970542 | Msa1031390:intron |
TCATTTAAGGCTTCATCCTC+TGG | 0.330482 | 7_1:+65971211 | Msa1031390:CDS |
ATCTCCGGCAGAATCATAAT+TGG | 0.340284 | 7_1:-65967780 | None:intergenic |
ACTTCAGGCAAAATTGGAAT+TGG | 0.344338 | 7_1:+65971996 | Msa1031390:three_prime_UTR |
TAACTACCTATTGGGGAACT+TGG | 0.345032 | 7_1:+65970551 | Msa1031390:CDS |
AGGGATCCAGCTCTGTGTCT+TGG | 0.349256 | 7_1:-65967475 | None:intergenic |
GAAAACCCGTGTATCTTATC+TGG | 0.351207 | 7_1:+65970966 | Msa1031390:CDS |
CAGTATACATTGCTTGTTGA+TGG | 0.353066 | 7_1:+65971656 | Msa1031390:CDS |
CTCATCTTGTTGTGGCATCT+GGG | 0.356862 | 7_1:+65972241 | Msa1031390:three_prime_UTR |
GGGATATGGAATGGTGGAGG+TGG | 0.368201 | 7_1:+65971322 | Msa1031390:CDS |
GAGATTACGCACTTCTTAAT+CGG | 0.368496 | 7_1:+65967798 | Msa1031390:CDS |
AAGATTATTCAAAGACTGTT+GGG | 0.372806 | 7_1:+65970577 | Msa1031390:CDS |
AACTCGTGGATAAGTGGATT+TGG | 0.374683 | 7_1:-65971591 | None:intergenic |
ACAAGATCCCAAACAATATC+AGG | 0.375376 | 7_1:+65967499 | Msa1031390:five_prime_UTR |
AGATTACTCATCCAAAATCT+TGG | 0.379267 | 7_1:+65971921 | Msa1031390:three_prime_UTR |
GGTGGAGCCTGATATTGTTT+GGG | 0.382081 | 7_1:-65967506 | None:intergenic |
CACCCTCCGCTTTCTCCAAA+AGG | 0.382083 | 7_1:-65968288 | None:intergenic |
CAAAGACACCTGTTCGAGTT+GGG | 0.382221 | 7_1:+65968332 | Msa1031390:CDS |
GACTGCAGGTTTAAGGGCTT+TGG | 0.389482 | 7_1:+65968451 | Msa1031390:CDS |
GATATGGAATGGTGGAGGTG+GGG | 0.396495 | 7_1:+65971324 | Msa1031390:CDS |
AGGTGGAGCCTGATATTGTT+TGG | 0.401212 | 7_1:-65967507 | None:intergenic |
TGGAATGGTGGAGGTGGGGA+TGG | 0.410352 | 7_1:+65971328 | Msa1031390:CDS |
CGACGTCGTGTAGTGTGGTT+TGG | 0.410799 | 7_1:-65967436 | None:intergenic |
ACTGTTGGGGTAGTTGATCT+TGG | 0.412256 | 7_1:+65970591 | Msa1031390:CDS |
GTGCATCTATATATCTTGTC+TGG | 0.413252 | 7_1:+65972132 | Msa1031390:three_prime_UTR |
CATTTCTTCTCATCTTGTTG+TGG | 0.421145 | 7_1:+65972233 | Msa1031390:three_prime_UTR |
TGGTGATCAGAAATTACTTC+AGG | 0.422341 | 7_1:+65971981 | Msa1031390:three_prime_UTR |
GCAGGCGACTGCAGGTTTAA+GGG | 0.425852 | 7_1:+65968445 | Msa1031390:intron |
ACAAGATCCATGCAAAGATA+TGG | 0.426100 | 7_1:-65971629 | None:intergenic |
GGAGTCGGAGGAGTGGTTAT+CGG | 0.427758 | 7_1:-65967618 | None:intergenic |
ACATTGCTTGTTGATGGGTT+TGG | 0.428444 | 7_1:+65971662 | Msa1031390:CDS |
CATCAACAAGCAATGTATAC+TGG | 0.429614 | 7_1:-65971655 | None:intergenic |
ACACATATGAAGTGCACTTT+TGG | 0.430750 | 7_1:+65971298 | Msa1031390:CDS |
CTCTGAGTCTGATGCTGCCA+TGG | 0.431442 | 7_1:+65970644 | Msa1031390:CDS |
ACGGAATCTGTAGATCTTAT+CGG | 0.432095 | 7_1:-65967687 | None:intergenic |
AGGAACATCTCCTTGACATA+TGG | 0.434201 | 7_1:-65970693 | None:intergenic |
TGGCCGTTGGATGTGGTGGC+AGG | 0.434886 | 7_1:-65967527 | None:intergenic |
CACAAGAAGGTGCTTATCAA+TGG | 0.436042 | 7_1:+65968658 | Msa1031390:CDS |
AGTAATCTAACTCATGAAAT+CGG | 0.437031 | 7_1:-65971906 | None:intergenic |
GGATATGGAATGGTGGAGGT+GGG | 0.437663 | 7_1:+65971323 | Msa1031390:CDS |
TTGGTGATGCAGGCGACTGC+AGG | 0.444894 | 7_1:+65968437 | Msa1031390:intron |
GTCTGGAAAGATGAACAAAA+TGG | 0.455253 | 7_1:+65972149 | Msa1031390:three_prime_UTR |
CCACACACCCCAACTCGAAC+AGG | 0.457831 | 7_1:-65968340 | None:intergenic |
AGGTTTAAGGGCTTTGGAAG+GGG | 0.457955 | 7_1:+65968457 | Msa1031390:CDS |
GCTCAAACGTCCAACTCGTC+AGG | 0.458315 | 7_1:+65967655 | Msa1031390:CDS |
ACAGCAAGCAGCGGAATCTC+TGG | 0.460912 | 7_1:+65968261 | Msa1031390:CDS |
AAAGATTATTCAAAGACTGT+TGG | 0.463019 | 7_1:+65970576 | Msa1031390:CDS |
CGTAGATGATACTGCTTCAA+TGG | 0.465000 | 7_1:-65971875 | None:intergenic |
CTCTTCAACTCGTGGATAAG+TGG | 0.465473 | 7_1:-65971597 | None:intergenic |
GGGGTAGTTGATCTTGGAGG+TGG | 0.468475 | 7_1:+65970597 | Msa1031390:CDS |
AATATTACCTCTATGTTCAC+AGG | 0.473842 | 7_1:+65970727 | Msa1031390:CDS |
TGAAGATTACGTATTGTATA+CGG | 0.474455 | 7_1:-65967293 | None:intergenic |
TCCTCTCCATCTGTTACTTG+TGG | 0.475432 | 7_1:-65970669 | None:intergenic |
ATCTGTTACTTGTGGAGCCA+TGG | 0.478818 | 7_1:-65970661 | None:intergenic |
GATCCAGCTCTGTGTCTTGG+GGG | 0.482632 | 7_1:-65967472 | None:intergenic |
GCAAAATTGGAATTGGATAT+GGG | 0.482796 | 7_1:+65972003 | Msa1031390:three_prime_UTR |
AACAAGATGAGAAGAAATGA+AGG | 0.483893 | 7_1:-65972229 | None:intergenic |
GGATCCAGCTCTGTGTCTTG+GGG | 0.485485 | 7_1:-65967473 | None:intergenic |
GTTGGGGTAGTTGATCTTGG+AGG | 0.487477 | 7_1:+65970594 | Msa1031390:CDS |
TTCATTTAAGCTTGCTCCAG+AGG | 0.488216 | 7_1:-65971227 | None:intergenic |
AACTACCTATTGGGGAACTT+GGG | 0.492294 | 7_1:+65970552 | Msa1031390:CDS |
GTCGAGGCAGCTTGGCCGCT+AGG | 0.494567 | 7_1:+65971847 | Msa1031390:CDS |
CAGGTTTAAGGGCTTTGGAA+GGG | 0.494592 | 7_1:+65968456 | Msa1031390:CDS |
CTGACCGTGGCCGTTGGATG+TGG | 0.495023 | 7_1:-65967534 | None:intergenic |
ACAAACGTGATGAGAAGGAT+AGG | 0.495209 | 7_1:-65967734 | None:intergenic |
ATTAAGAAGTGCGTAATCTC+CGG | 0.499147 | 7_1:-65967795 | None:intergenic |
AGCGGAGGGTGTTGTTCCAC+GGG | 0.500228 | 7_1:+65968300 | Msa1031390:CDS |
GGCTTTGGAAGGGGATGCAT+CGG | 0.501347 | 7_1:+65968466 | Msa1031390:CDS |
ATTCTTGCATAGAAATCTAA+AGG | 0.501938 | 7_1:+65972344 | Msa1031390:three_prime_UTR |
TTCTGATCACCATGAATGAC+AGG | 0.503190 | 7_1:-65971970 | None:intergenic |
ATGTCAAGGAGATGTTCCTC+AGG | 0.505087 | 7_1:+65970697 | Msa1031390:CDS |
GCAGGACGAACAATTGCAAC+TGG | 0.506202 | 7_1:-65971518 | None:intergenic |
GCTCTCAGTTACTTGCGCTA+TGG | 0.509756 | 7_1:+65970897 | Msa1031390:intron |
ACAAGAAGGTGCTTATCAAT+GGG | 0.512019 | 7_1:+65968659 | Msa1031390:CDS |
CTTTAAATCTGATGCTGATG+TGG | 0.513532 | 7_1:+65968617 | Msa1031390:CDS |
GAAACACTGCCTGTCATTCA+TGG | 0.516858 | 7_1:+65971961 | Msa1031390:three_prime_UTR |
TGCTGATGTGGTTACAGTGT+TGG | 0.518730 | 7_1:+65968629 | Msa1031390:CDS |
AGTATACATTGCTTGTTGAT+GGG | 0.518914 | 7_1:+65971657 | Msa1031390:CDS |
ACCCTCCGCTTTCTCCAAAA+GGG | 0.523433 | 7_1:-65968287 | None:intergenic |
ATGCAAAAGCGTGGCTCACA+AGG | 0.525610 | 7_1:+65971249 | Msa1031390:CDS |
TGTATCTTATCTGGCTCTGA+TGG | 0.528005 | 7_1:+65970975 | Msa1031390:CDS |
GCAGGTTTAAGGGCTTTGGA+AGG | 0.529646 | 7_1:+65968455 | Msa1031390:CDS |
GGTGGGATATGGAATGGTGG+AGG | 0.530190 | 7_1:+65971319 | Msa1031390:CDS |
ATATATCTGATTTACAGCTC+TGG | 0.534098 | 7_1:+65972088 | Msa1031390:three_prime_UTR |
GCGGCCAAGCTGCCTCGACA+AGG | 0.534743 | 7_1:-65971843 | None:intergenic |
CCGTTGGATGTGGTGGCAGG+TGG | 0.535170 | 7_1:-65967524 | None:intergenic |
GTTATCGGAAGGAGGAGAAG+TGG | 0.538367 | 7_1:-65967603 | None:intergenic |
AAGCGGAGGGTGTTGTTCCA+CGG | 0.539954 | 7_1:+65968299 | Msa1031390:CDS |
GTCTTTGATCGCAATTCCCG+TGG | 0.543605 | 7_1:-65968316 | None:intergenic |
TGATTGTGATTTGTGTGTGC+GGG | 0.545007 | 7_1:-65967370 | None:intergenic |
ATGCCCTTGTCGAGGCAGCT+TGG | 0.547480 | 7_1:+65971839 | Msa1031390:CDS |
ACCGTGGCCGTTGGATGTGG+TGG | 0.548274 | 7_1:-65967531 | None:intergenic |
CGGAGGAAGGTGATCGGTAA+CGG | 0.548616 | 7_1:-65967559 | None:intergenic |
AGAGATTCCGCTGCTTGCTG+TGG | 0.550357 | 7_1:-65968259 | None:intergenic |
AGTTGCAATTGTTCGTCCTG+CGG | 0.552911 | 7_1:+65971520 | Msa1031390:CDS |
CACTTATCCACGAGTTGAAG+AGG | 0.553464 | 7_1:+65971598 | Msa1031390:CDS |
TTTCTTTGACCGGGCTGCTG+AGG | 0.553807 | 7_1:+65971378 | Msa1031390:CDS |
AGCTCCAATTATGATTCTGC+CGG | 0.554467 | 7_1:+65967776 | Msa1031390:CDS |
TACAATACGTAATCTTCACT+TGG | 0.555016 | 7_1:+65967298 | Msa1031390:five_prime_UTR |
ACCAATGTAATCTCTTGCCA+TGG | 0.556995 | 7_1:-65971796 | None:intergenic |
CAAACGTGATGAGAAGGATA+GGG | 0.558245 | 7_1:-65967733 | None:intergenic |
TCAAAGACACCTGTTCGAGT+TGG | 0.559745 | 7_1:+65968331 | Msa1031390:CDS |
ATATTGTTTGGGATCTTGTG+AGG | 0.560025 | 7_1:-65967495 | None:intergenic |
GAGAGTGACTCCTGACGAGT+TGG | 0.560863 | 7_1:-65967665 | None:intergenic |
GCCACCACATCCAACGGCCA+CGG | 0.561052 | 7_1:+65967530 | Msa1031390:five_prime_UTR |
CCACCTGCCACCACATCCAA+CGG | 0.562179 | 7_1:+65967524 | Msa1031390:five_prime_UTR |
CGGCCAAGCTGCCTCGACAA+GGG | 0.564799 | 7_1:-65971842 | None:intergenic |
AATTTAGATCTTGTTCACAT+TGG | 0.568868 | 7_1:+65967917 | Msa1031390:CDS |
TTTGGTGAATTCGGAGTCGG+AGG | 0.569681 | 7_1:-65967630 | None:intergenic |
TAATGTAAGATTGTGAAGGA+AGG | 0.569773 | 7_1:-65967324 | None:intergenic |
AAAGAACAAACGTGATGAGA+AGG | 0.569919 | 7_1:-65967739 | None:intergenic |
GCGGAGAGTTCAGCGGAGGA+AGG | 0.573737 | 7_1:-65967572 | None:intergenic |
AATAACAGCATAAGAGCCAC+CGG | 0.574955 | 7_1:-65967843 | None:intergenic |
TATTGTTTGGGATCTTGTGA+GGG | 0.575359 | 7_1:-65967494 | None:intergenic |
TGGAGGTGGATCTGTTCAGA+TGG | 0.576048 | 7_1:+65970611 | Msa1031390:CDS |
AAGTACATAAAGTATAAAGT+TGG | 0.577621 | 7_1:+65967248 | Msa1031390:five_prime_UTR |
AAAGACACCTGTTCGAGTTG+GGG | 0.577659 | 7_1:+65968333 | Msa1031390:CDS |
GAACCTTCCATATCTTTGCA+TGG | 0.579721 | 7_1:+65971622 | Msa1031390:CDS |
TGAGCATACGCACTCAAACC+AGG | 0.584096 | 7_1:-65968232 | None:intergenic |
AAATAAATACCTCAGCAGCC+CGG | 0.585473 | 7_1:-65971387 | None:intergenic |
TTACAATTAACTACCTATTG+GGG | 0.589083 | 7_1:+65970544 | Msa1031390:CDS |
GCAGCATCCTCAAAATCCGC+AGG | 0.589555 | 7_1:-65971536 | None:intergenic |
TGTTTGCAGGCATATATCCA+TGG | 0.590051 | 7_1:+65971779 | Msa1031390:intron |
AGGTTCCCCTCTTCAACTCG+TGG | 0.591207 | 7_1:-65971605 | None:intergenic |
ACTTATCCACGAGTTGAAGA+GGG | 0.594026 | 7_1:+65971599 | Msa1031390:CDS |
AGGAGGAGAAGTGGATTGAA+CGG | 0.595772 | 7_1:-65967594 | None:intergenic |
ATGGCTCCACAAGTAACAGA+TGG | 0.605642 | 7_1:+65970663 | Msa1031390:CDS |
TGAAACGACGTCGTGTAGTG+TGG | 0.605749 | 7_1:-65967441 | None:intergenic |
GTGTTGGATGGAACACAAGA+AGG | 0.606025 | 7_1:+65968645 | Msa1031390:CDS |
ATACGACGATGCCCTTGTCG+AGG | 0.610647 | 7_1:+65971831 | Msa1031390:CDS |
GAATCATAATTGGAGCTCGA+CGG | 0.615838 | 7_1:-65967770 | None:intergenic |
GATGTGGTTACAGTGTTGGA+TGG | 0.618908 | 7_1:+65968633 | Msa1031390:CDS |
TCCACAAGTAACAGATGGAG+AGG | 0.619159 | 7_1:+65970668 | Msa1031390:CDS |
AGATTATTCAAAGACTGTTG+GGG | 0.619546 | 7_1:+65970578 | Msa1031390:CDS |
TGGAGAGGATCCATATGTCA+AGG | 0.619661 | 7_1:+65970683 | Msa1031390:CDS |
TTAGGAACTTACAACTATGG+AGG | 0.619885 | 7_1:+65971184 | Msa1031390:intron |
ATCTTGGAGCATGAAATTTG+TGG | 0.621439 | 7_1:+65971937 | Msa1031390:three_prime_UTR |
GTTCAGCGGAGGAAGGTGAT+CGG | 0.626261 | 7_1:-65967565 | None:intergenic |
GGCAGCATCAGACTCAGAGA+TGG | 0.631462 | 7_1:-65970640 | None:intergenic |
TGTCAAGGAGATGTTCCTCA+GGG | 0.632817 | 7_1:+65970698 | Msa1031390:CDS |
CTTGTGAATATAGTCAATTG+TGG | 0.633196 | 7_1:+65972287 | Msa1031390:three_prime_UTR |
GATCCATGCAAAGATATGGA+AGG | 0.635979 | 7_1:-65971625 | None:intergenic |
GAGGAGTGGTTATCGGAAGG+AGG | 0.641438 | 7_1:-65967611 | None:intergenic |
GATAAGATCTACAGATTCCG+TGG | 0.643142 | 7_1:+65967689 | Msa1031390:CDS |
TCGGAGGAGTGGTTATCGGA+AGG | 0.643921 | 7_1:-65967614 | None:intergenic |
ATCGGTAACGGATCTGACCG+TGG | 0.644280 | 7_1:-65967547 | None:intergenic |
CTTAAATGAATGCAAAAGCG+TGG | 0.648545 | 7_1:+65971240 | Msa1031390:CDS |
AATGTAATGTAAGATTGTGA+AGG | 0.658619 | 7_1:-65967328 | None:intergenic |
TGAATTCGGAGTCGGAGGAG+TGG | 0.659077 | 7_1:-65967625 | None:intergenic |
GTGATTGTGATTTGTGTGTG+CGG | 0.661840 | 7_1:-65967371 | None:intergenic |
AACGGCGGAGAGTTCAGCGG+AGG | 0.665060 | 7_1:-65967576 | None:intergenic |
TTTGGTGGGATATGGAATGG+TGG | 0.667285 | 7_1:+65971316 | Msa1031390:CDS |
CAGAGCCAGATAAGATACAC+GGG | 0.667545 | 7_1:-65970971 | None:intergenic |
TCAGAGCCAGATAAGATACA+CGG | 0.667817 | 7_1:-65970972 | None:intergenic |
TCAGAAACCACAGCAAGCAG+CGG | 0.674371 | 7_1:+65968252 | Msa1031390:CDS |
ATCGGATAAGATATTGCAAG+CGG | 0.679308 | 7_1:+65968484 | Msa1031390:CDS |
CTTATCCACGAGTTGAAGAG+GGG | 0.688203 | 7_1:+65971600 | Msa1031390:CDS |
TTGAACGGCGGAGAGTTCAG+CGG | 0.688632 | 7_1:-65967579 | None:intergenic |
GCTTCAATGGCGCTTCCTAG+CGG | 0.690235 | 7_1:-65971862 | None:intergenic |
AGACAACAAGAAGAGTGCCA+CGG | 0.696066 | 7_1:-65967706 | None:intergenic |
AGGAGAAGTGGATTGAACGG+CGG | 0.708077 | 7_1:-65967591 | None:intergenic |
TCCATGGCAAGAGATTACAT+TGG | 0.741199 | 7_1:+65971795 | Msa1031390:CDS |
GTCAAGGAGATGTTCCTCAG+GGG | 0.744910 | 7_1:+65970699 | Msa1031390:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAATAATAATTAATTTTT+TGG | + | chr7_1:65969093-65969112 | Msa1031390:intron | 0.0% |
!! | AAATTTGAATTGAATTTATT+TGG | + | chr7_1:65968418-65968437 | Msa1031390:intron | 10.0% |
!!! | ATTTATAAAATTTTGAAATC+AGG | + | chr7_1:65969621-65969640 | Msa1031390:intron | 10.0% |
!!! | TTTATAAAATTTTGAAATCA+GGG | + | chr7_1:65969622-65969641 | Msa1031390:intron | 10.0% |
!!! | TATAAGTATAAGAAATTTTT+TGG | - | chr7_1:65969753-65969772 | None:intergenic | 10.0% |
!! | AAACAAGATATTTAAAAATA+TGG | + | chr7_1:65969784-65969803 | Msa1031390:intron | 10.0% |
!! | TTATGTAAACATTGTATAAA+AGG | - | chr7_1:65967209-65967228 | None:intergenic | 15.0% |
!! | ATTCCATAAAATAAAAAAGA+TGG | + | chr7_1:65968002-65968021 | Msa1031390:intron | 15.0% |
!! | AATTAACAAAATCTATATTC+AGG | + | chr7_1:65968832-65968851 | Msa1031390:intron | 15.0% |
!! | ATTTATTCTATCAATTTCTT+TGG | + | chr7_1:65969316-65969335 | Msa1031390:intron | 15.0% |
!! | TAGAATTATAATCAAATCTT+CGG | - | chr7_1:65970028-65970047 | None:intergenic | 15.0% |
!!! | AAAGAATTTTATTTAAACAG+GGG | - | chr7_1:65970124-65970143 | None:intergenic | 15.0% |
!!! | GAAAGAATTTTATTTAAACA+GGG | - | chr7_1:65970125-65970144 | None:intergenic | 15.0% |
!!! | TGAAAGAATTTTATTTAAAC+AGG | - | chr7_1:65970126-65970145 | None:intergenic | 15.0% |
!!! | TATAACTTTAGAGAAAATAT+AGG | - | chr7_1:65970304-65970323 | None:intergenic | 15.0% |
!!! | GATTTTTTAAAATTCTTCTT+AGG | + | chr7_1:65971166-65971185 | Msa1031390:intron | 15.0% |
!! | ACATTTAAACAAAAATGAAA+TGG | - | chr7_1:65972186-65972205 | None:intergenic | 15.0% |
!! | TCTAAAGGAAAATTTATTAA+TGG | + | chr7_1:65972359-65972378 | Msa1031390:three_prime_UTR | 15.0% |
!!! | CTTTATACTTTATGTACTTT+TGG | - | chr7_1:65967247-65967266 | None:intergenic | 20.0% |
!! | AAGTACATAAAGTATAAAGT+TGG | + | chr7_1:65967248-65967267 | Msa1031390:five_prime_UTR | 20.0% |
!!! | GTTCCATCTTTTTTATTTTA+TGG | - | chr7_1:65968008-65968027 | None:intergenic | 20.0% |
!! | ATTTAAATTTCGTTGATGTA+AGG | + | chr7_1:65968566-65968585 | Msa1031390:intron | 20.0% |
!! | ATTCATATAATACTAGTGAA+TGG | - | chr7_1:65968757-65968776 | None:intergenic | 20.0% |
!! | AAATAGATAGAGAAATTGTA+TGG | - | chr7_1:65969003-65969022 | None:intergenic | 20.0% |
!!! | TAATTAATTTTTTGGCTGTA+TGG | + | chr7_1:65969101-65969120 | Msa1031390:intron | 20.0% |
!! | ACGCAAGATATTTAAAAATA+TGG | + | chr7_1:65969426-65969445 | Msa1031390:intron | 20.0% |
!! | ATTATGACTTATGAGATTTA+TGG | + | chr7_1:65969906-65969925 | Msa1031390:intron | 20.0% |
!! | TAACAATTTATCTTGCATTA+TGG | - | chr7_1:65970051-65970070 | None:intergenic | 20.0% |
!!! | TATTTTCTCTAAAGTTATAC+CGG | + | chr7_1:65970305-65970324 | Msa1031390:intron | 20.0% |
!! | GTTAATGCTATTAGTATTAA+AGG | - | chr7_1:65970806-65970825 | None:intergenic | 20.0% |
!!! | TTTTTTCATTTAACGTTTCT+TGG | + | chr7_1:65971407-65971426 | Msa1031390:intron | 20.0% |
! | TGAAGATTACGTATTGTATA+CGG | - | chr7_1:65967296-65967315 | None:intergenic | 25.0% |
! | AATGTAATGTAAGATTGTGA+AGG | - | chr7_1:65967331-65967350 | None:intergenic | 25.0% |
! | CAAAATGAAAAACATGAACA+CGG | - | chr7_1:65967892-65967911 | None:intergenic | 25.0% |
! | AATTTAGATCTTGTTCACAT+TGG | + | chr7_1:65967917-65967936 | Msa1031390:CDS | 25.0% |
!! | GGAACAATTTGCATTTTATT+AGG | + | chr7_1:65968023-65968042 | Msa1031390:intron | 25.0% |
!!! | TTTGTGTGTTGTTTTTATGA+AGG | + | chr7_1:65968395-65968414 | Msa1031390:intron | 25.0% |
!! | AACATAAGCTGATTTCATAT+TGG | + | chr7_1:65969202-65969221 | Msa1031390:intron | 25.0% |
!! | CTTTGGAAAAAAAAAAGAAC+TGG | + | chr7_1:65969333-65969352 | Msa1031390:intron | 25.0% |
!!! | TGTATTTCTGAAACTGTATT+TGG | + | chr7_1:65969373-65969392 | Msa1031390:intron | 25.0% |
! | AAATATGGTTCAGTTTGATA+AGG | + | chr7_1:65969441-65969460 | Msa1031390:intron | 25.0% |
!!! | TTTTGAAACTGTTATGGTAA+TGG | - | chr7_1:65969477-65969496 | None:intergenic | 25.0% |
! | TACTTTATGAGTTTGAAAAC+TGG | + | chr7_1:65969573-65969592 | Msa1031390:intron | 25.0% |
! | ACTTTATGAGTTTGAAAACT+GGG | + | chr7_1:65969574-65969593 | Msa1031390:intron | 25.0% |
!!! | ATAAAATTTTGAAATCAGGG+TGG | + | chr7_1:65969625-65969644 | Msa1031390:intron | 25.0% |
!!! | TAAAATTTTGAAATCAGGGT+GGG | + | chr7_1:65969626-65969645 | Msa1031390:intron | 25.0% |
!! | ATTCTCAGTTTTCTCAAATA+TGG | + | chr7_1:65969938-65969957 | Msa1031390:intron | 25.0% |
!! | GATAATCTTAACTTGAAAGA+TGG | + | chr7_1:65969960-65969979 | Msa1031390:intron | 25.0% |
! | TGCAAGATAAATTGTTACAT+TGG | + | chr7_1:65970054-65970073 | Msa1031390:intron | 25.0% |
! | TTCGTTAACATAGTTGAATT+TGG | + | chr7_1:65970155-65970174 | Msa1031390:intron | 25.0% |
!!! | TTGGTTTTTTCTATTTGAAG+AGG | + | chr7_1:65970174-65970193 | Msa1031390:intron | 25.0% |
! | ATTAAACTATTGATCAGAAC+AGG | - | chr7_1:65970383-65970402 | None:intergenic | 25.0% |
! | GTTACAATTAACTACCTATT+GGG | + | chr7_1:65970543-65970562 | Msa1031390:CDS | 25.0% |
! | TTACAATTAACTACCTATTG+GGG | + | chr7_1:65970544-65970563 | Msa1031390:CDS | 25.0% |
! | AAAGATTATTCAAAGACTGT+TGG | + | chr7_1:65970576-65970595 | Msa1031390:CDS | 25.0% |
! | AAGATTATTCAAAGACTGTT+GGG | + | chr7_1:65970577-65970596 | Msa1031390:CDS | 25.0% |
!! | TTTTTCTTTTCTTTGTTCAC+AGG | + | chr7_1:65970780-65970799 | Msa1031390:intron | 25.0% |
! | ATACTAATAGCATTAACTCA+TGG | + | chr7_1:65970809-65970828 | Msa1031390:intron | 25.0% |
!! | TTTTCGTATCAACTAATGAA+AGG | - | chr7_1:65971079-65971098 | None:intergenic | 25.0% |
! | ATGTATAACTATCCAAACTT+TGG | - | chr7_1:65971699-65971718 | None:intergenic | 25.0% |
! | AGTAATCTAACTCATGAAAT+CGG | - | chr7_1:65971909-65971928 | None:intergenic | 25.0% |
! | ATTCTTGCATAGAAATCTAA+AGG | + | chr7_1:65972344-65972363 | Msa1031390:three_prime_UTR | 25.0% |
TACAATACGTAATCTTCACT+TGG | + | chr7_1:65967298-65967317 | Msa1031390:five_prime_UTR | 30.0% | |
TAATGTAAGATTGTGAAGGA+AGG | - | chr7_1:65967327-65967346 | None:intergenic | 30.0% | |
!! | TTTGAGCATTTTGGTGAATT+CGG | - | chr7_1:65967642-65967661 | None:intergenic | 30.0% |
!!! | TATGCTGTTATTTTTGATGC+TGG | + | chr7_1:65967854-65967873 | Msa1031390:CDS | 30.0% |
! | AACACAATTTTCTCTGCAAT+AGG | + | chr7_1:65967968-65967987 | Msa1031390:intron | 30.0% |
TCACCAAAATTATTTGAGTG+TGG | + | chr7_1:65968063-65968082 | Msa1031390:intron | 30.0% | |
! | ATGCCACACTCAAATAATTT+TGG | - | chr7_1:65968069-65968088 | None:intergenic | 30.0% |
GATATACAATTAAGCGCAAT+AGG | + | chr7_1:65968129-65968148 | Msa1031390:intron | 30.0% | |
!! | TTGAATTTATTTGGTGATGC+AGG | + | chr7_1:65968427-65968446 | Msa1031390:intron | 30.0% |
TGTATCTTTCTCAATTTCAG+TGG | + | chr7_1:65968517-65968536 | Msa1031390:intron | 30.0% | |
AATTTCGTTGATGTAAGGTA+AGG | + | chr7_1:65968571-65968590 | Msa1031390:intron | 30.0% | |
ATTTCGTTGATGTAAGGTAA+GGG | + | chr7_1:65968572-65968591 | Msa1031390:intron | 30.0% | |
CATCATGTCTCATATTTACA+GGG | - | chr7_1:65968958-65968977 | None:intergenic | 30.0% | |
TCATCATGTCTCATATTTAC+AGG | - | chr7_1:65968959-65968978 | None:intergenic | 30.0% | |
TATCTATTTGTATGACTCCA+AGG | + | chr7_1:65969014-65969033 | Msa1031390:intron | 30.0% | |
TGTATGGTAAGAATATCTTC+TGG | + | chr7_1:65969117-65969136 | Msa1031390:intron | 30.0% | |
GTATGGTAAGAATATCTTCT+GGG | + | chr7_1:65969118-65969137 | Msa1031390:intron | 30.0% | |
TACCATAACAGTTTCAAAAC+AGG | + | chr7_1:65969478-65969497 | Msa1031390:intron | 30.0% | |
ACCATAACAGTTTCAAAACA+GGG | + | chr7_1:65969479-65969498 | Msa1031390:intron | 30.0% | |
TTTGAAAACTGGGATGAATA+TGG | + | chr7_1:65969584-65969603 | Msa1031390:intron | 30.0% | |
CAACTTAACAATGAAAAGTG+CGG | + | chr7_1:65969865-65969884 | Msa1031390:intron | 30.0% | |
TAAGTCATAATGCTGTTCTT+CGG | - | chr7_1:65969897-65969916 | None:intergenic | 30.0% | |
TGACTTATGAGATTTATGGA+TGG | + | chr7_1:65969910-65969929 | Msa1031390:intron | 30.0% | |
GACTTATGAGATTTATGGAT+GGG | + | chr7_1:65969911-65969930 | Msa1031390:intron | 30.0% | |
! | TTAACTTGAAAGATGGACAT+AGG | + | chr7_1:65969967-65969986 | Msa1031390:intron | 30.0% |
GTTCAACAATGAAAAGCTTA+AGG | + | chr7_1:65970096-65970115 | Msa1031390:intron | 30.0% | |
TTTCTATTTGAAGAGGATGA+TGG | + | chr7_1:65970181-65970200 | Msa1031390:intron | 30.0% | |
!! | GAACTCTGAAATCTAAAGAA+TGG | + | chr7_1:65970251-65970270 | Msa1031390:intron | 30.0% |
!! | TTTTATTTACCGGTGTGAAT+TGG | - | chr7_1:65970360-65970379 | None:intergenic | 30.0% |
!!! | TCAGAACAGGTTTTATTTAC+CGG | - | chr7_1:65970370-65970389 | None:intergenic | 30.0% |
!!! | ACCTTGTCTCGTTTTATTTT+AGG | + | chr7_1:65970521-65970540 | Msa1031390:intron | 30.0% |
ACCTAAAATAAAACGAGACA+AGG | - | chr7_1:65970525-65970544 | None:intergenic | 30.0% | |
GGTTACAATTAACTACCTAT+TGG | + | chr7_1:65970542-65970561 | Msa1031390:intron | 30.0% | |
AGATTATTCAAAGACTGTTG+GGG | + | chr7_1:65970578-65970597 | Msa1031390:CDS | 30.0% | |
AATATTACCTCTATGTTCAC+AGG | + | chr7_1:65970727-65970746 | Msa1031390:CDS | 30.0% | |
TTCTTAGGAACTTACAACTA+TGG | + | chr7_1:65971181-65971200 | Msa1031390:intron | 30.0% | |
AGAAAAATGAGGCAACAAAT+AGG | - | chr7_1:65971363-65971382 | None:intergenic | 30.0% | |
! | AGTATACATTGCTTGTTGAT+GGG | + | chr7_1:65971657-65971676 | Msa1031390:CDS | 30.0% |
!!! | GTAGGTTTTATTCCAAAGTT+TGG | + | chr7_1:65971684-65971703 | Msa1031390:intron | 30.0% |
GTTTGGATAGTTATACATGA+CGG | + | chr7_1:65971701-65971720 | Msa1031390:intron | 30.0% | |
AGATTACTCATCCAAAATCT+TGG | + | chr7_1:65971921-65971940 | Msa1031390:three_prime_UTR | 30.0% | |
! | AATTTCATGCTCCAAGATTT+TGG | - | chr7_1:65971935-65971954 | None:intergenic | 30.0% |
GAAATTACTTCAGGCAAAAT+TGG | + | chr7_1:65971990-65972009 | Msa1031390:three_prime_UTR | 30.0% | |
GCAAAATTGGAATTGGATAT+GGG | + | chr7_1:65972003-65972022 | Msa1031390:three_prime_UTR | 30.0% | |
!!! | GGTCTATTTTTCAGGAATAA+CGG | + | chr7_1:65972024-65972043 | Msa1031390:three_prime_UTR | 30.0% |
ATATATCTGATTTACAGCTC+TGG | + | chr7_1:65972088-65972107 | Msa1031390:three_prime_UTR | 30.0% | |
AACAAGATGAGAAGAAATGA+AGG | - | chr7_1:65972232-65972251 | None:intergenic | 30.0% | |
CTTGTGAATATAGTCAATTG+TGG | + | chr7_1:65972287-65972306 | Msa1031390:three_prime_UTR | 30.0% | |
! | TCACTCTCTTTTCTCTATTG+TGG | - | chr7_1:65967414-65967433 | None:intergenic | 35.0% |
! | TATTGTTTGGGATCTTGTGA+GGG | - | chr7_1:65967497-65967516 | None:intergenic | 35.0% |
! | ATATTGTTTGGGATCTTGTG+AGG | - | chr7_1:65967498-65967517 | None:intergenic | 35.0% |
ACAAGATCCCAAACAATATC+AGG | + | chr7_1:65967499-65967518 | Msa1031390:five_prime_UTR | 35.0% | |
ACGGAATCTGTAGATCTTAT+CGG | - | chr7_1:65967690-65967709 | None:intergenic | 35.0% | |
AAAGAACAAACGTGATGAGA+AGG | - | chr7_1:65967742-65967761 | None:intergenic | 35.0% | |
! | ATTAAGAAGTGCGTAATCTC+CGG | - | chr7_1:65967798-65967817 | None:intergenic | 35.0% |
GAGATTACGCACTTCTTAAT+CGG | + | chr7_1:65967798-65967817 | Msa1031390:CDS | 35.0% | |
CTTTCGCCTGATAAAAAATC+CGG | + | chr7_1:65967824-65967843 | Msa1031390:CDS | 35.0% | |
! | AGATCTTGAACTTTTCGAAC+AGG | + | chr7_1:65967943-65967962 | Msa1031390:CDS | 35.0% |
ATCGGATAAGATATTGCAAG+CGG | + | chr7_1:65968484-65968503 | Msa1031390:CDS | 35.0% | |
CACATCAGCATCAGATTTAA+AGG | - | chr7_1:65968619-65968638 | None:intergenic | 35.0% | |
CTTTAAATCTGATGCTGATG+TGG | + | chr7_1:65968617-65968636 | Msa1031390:CDS | 35.0% | |
!! | ACAAGAAGGTGCTTATCAAT+GGG | + | chr7_1:65968659-65968678 | Msa1031390:CDS | 35.0% |
TCCAATTCTATTCGTAGTAG+AGG | + | chr7_1:65968858-65968877 | Msa1031390:intron | 35.0% | |
TCCTCTACTACGAATAGAAT+TGG | - | chr7_1:65968862-65968881 | None:intergenic | 35.0% | |
TTCTATTCGTAGTAGAGGAA+TGG | + | chr7_1:65968863-65968882 | Msa1031390:intron | 35.0% | |
! | TTCATTTAAGTTCCTACCAG+TGG | - | chr7_1:65968896-65968915 | None:intergenic | 35.0% |
ACTGGTAGGAACTTAAATGA+AGG | + | chr7_1:65968895-65968914 | Msa1031390:intron | 35.0% | |
AGACATGATGAAAGTCATCT+TGG | + | chr7_1:65968968-65968987 | Msa1031390:intron | 35.0% | |
AAAACCATACAAGTGTTCCT+TGG | - | chr7_1:65969034-65969053 | None:intergenic | 35.0% | |
! | AACACTTGTATGGTTTTTGC+AGG | + | chr7_1:65969037-65969056 | Msa1031390:intron | 35.0% |
ATTCGTCTAATGTTTCAGTG+CGG | - | chr7_1:65969257-65969276 | None:intergenic | 35.0% | |
! | TATCTTGCGTTTTCACAAGA+GGG | - | chr7_1:65969416-65969435 | None:intergenic | 35.0% |
! | ATATCTTGCGTTTTCACAAG+AGG | - | chr7_1:65969417-65969436 | None:intergenic | 35.0% |
!!! | TCCCTGTTTTGAAACTGTTA+TGG | - | chr7_1:65969483-65969502 | None:intergenic | 35.0% |
TAACAGTTTCAAAACAGGGA+TGG | + | chr7_1:65969483-65969502 | Msa1031390:intron | 35.0% | |
AACAGTTTCAAAACAGGGAT+GGG | + | chr7_1:65969484-65969503 | Msa1031390:intron | 35.0% | |
ATGATGTGAAGTCTGAAGAA+CGG | + | chr7_1:65969676-65969695 | Msa1031390:intron | 35.0% | |
! | AAGAACGGCGTAAAACATTT+TGG | + | chr7_1:65969691-65969710 | Msa1031390:intron | 35.0% |
!!! | CGTAAAACATTTTGGCTACT+TGG | + | chr7_1:65969699-65969718 | Msa1031390:intron | 35.0% |
CATTCTAGTAATTGTTCCAC+TGG | + | chr7_1:65969828-65969847 | Msa1031390:intron | 35.0% | |
TTGTTCCACTGGATGAATTT+CGG | + | chr7_1:65969839-65969858 | Msa1031390:intron | 35.0% | |
ATCTTCGGAATCTAACAATC+AGG | - | chr7_1:65970013-65970032 | None:intergenic | 35.0% | |
GTTATACCGGATATATTCTC+AGG | + | chr7_1:65970318-65970337 | Msa1031390:intron | 35.0% | |
AAGCTACCTGAGAATATATC+CGG | - | chr7_1:65970327-65970346 | None:intergenic | 35.0% | |
AGAAAAACCTGTGAACATAG+AGG | - | chr7_1:65970737-65970756 | None:intergenic | 35.0% | |
!! | GCAGAGATTTTAAAGGTTTC+CGG | + | chr7_1:65970936-65970955 | Msa1031390:CDS | 35.0% |
! | CTTAAAGTTCTGATGACAAG+TGG | + | chr7_1:65971144-65971163 | Msa1031390:intron | 35.0% |
TTAGGAACTTACAACTATGG+AGG | + | chr7_1:65971184-65971203 | Msa1031390:intron | 35.0% | |
CTATGGAGGAAAGTCATTTA+AGG | + | chr7_1:65971198-65971217 | Msa1031390:CDS | 35.0% | |
CTTAAATGAATGCAAAAGCG+TGG | + | chr7_1:65971240-65971259 | Msa1031390:CDS | 35.0% | |
! | ACACATATGAAGTGCACTTT+TGG | + | chr7_1:65971298-65971317 | Msa1031390:CDS | 35.0% |
! | ATATGAAGTGCACTTTTGGT+GGG | + | chr7_1:65971302-65971321 | Msa1031390:CDS | 35.0% |
!! | TTGCCTCATTTTTCTTTGAC+CGG | + | chr7_1:65971368-65971387 | Msa1031390:CDS | 35.0% |
ACAAGATCCATGCAAAGATA+TGG | - | chr7_1:65971632-65971651 | None:intergenic | 35.0% | |
CATCAACAAGCAATGTATAC+TGG | - | chr7_1:65971658-65971677 | None:intergenic | 35.0% | |
! | CAGTATACATTGCTTGTTGA+TGG | + | chr7_1:65971656-65971675 | Msa1031390:CDS | 35.0% |
TATTGCTTTCACTTGTTTGC+AGG | + | chr7_1:65971766-65971785 | Msa1031390:intron | 35.0% | |
ATCTTGGAGCATGAAATTTG+TGG | + | chr7_1:65971937-65971956 | Msa1031390:three_prime_UTR | 35.0% | |
TGGTGATCAGAAATTACTTC+AGG | + | chr7_1:65971981-65972000 | Msa1031390:three_prime_UTR | 35.0% | |
ACTTCAGGCAAAATTGGAAT+TGG | + | chr7_1:65971996-65972015 | Msa1031390:three_prime_UTR | 35.0% | |
GGCAAAATTGGAATTGGATA+TGG | + | chr7_1:65972002-65972021 | Msa1031390:three_prime_UTR | 35.0% | |
!! | TGGATATGGGTCTATTTTTC+AGG | + | chr7_1:65972016-65972035 | Msa1031390:three_prime_UTR | 35.0% |
GTGCATCTATATATCTTGTC+TGG | + | chr7_1:65972132-65972151 | Msa1031390:three_prime_UTR | 35.0% | |
GTCTGGAAAGATGAACAAAA+TGG | + | chr7_1:65972149-65972168 | Msa1031390:three_prime_UTR | 35.0% | |
CATTTCTTCTCATCTTGTTG+TGG | + | chr7_1:65972233-65972252 | Msa1031390:three_prime_UTR | 35.0% | |
GTGCGGGAAAAATGGTTAAA+TGG | - | chr7_1:65967357-65967376 | None:intergenic | 40.0% | |
ATTTGTGTGTGCGGGAAAAA+TGG | - | chr7_1:65967365-65967384 | None:intergenic | 40.0% | |
! | TGATTGTGATTTGTGTGTGC+GGG | - | chr7_1:65967373-65967392 | None:intergenic | 40.0% |
! | GTGATTGTGATTTGTGTGTG+CGG | - | chr7_1:65967374-65967393 | None:intergenic | 40.0% |
!! | CATTTTGGTGAATTCGGAGT+CGG | - | chr7_1:65967636-65967655 | None:intergenic | 40.0% |
! | AGTTGGACGTTTGAGCATTT+TGG | - | chr7_1:65967651-65967670 | None:intergenic | 40.0% |
GATAAGATCTACAGATTCCG+TGG | + | chr7_1:65967689-65967708 | Msa1031390:CDS | 40.0% | |
CAAACGTGATGAGAAGGATA+GGG | - | chr7_1:65967736-65967755 | None:intergenic | 40.0% | |
ACAAACGTGATGAGAAGGAT+AGG | - | chr7_1:65967737-65967756 | None:intergenic | 40.0% | |
GAATCATAATTGGAGCTCGA+CGG | - | chr7_1:65967773-65967792 | None:intergenic | 40.0% | |
AGCTCCAATTATGATTCTGC+CGG | + | chr7_1:65967776-65967795 | Msa1031390:CDS | 40.0% | |
ATCTCCGGCAGAATCATAAT+TGG | - | chr7_1:65967783-65967802 | None:intergenic | 40.0% | |
AATAACAGCATAAGAGCCAC+CGG | - | chr7_1:65967846-65967865 | None:intergenic | 40.0% | |
! | ATTTTTGATGCTGGTAGCTC+TGG | + | chr7_1:65967863-65967882 | Msa1031390:CDS | 40.0% |
!!! | GGGTGTGTGGTTTTGTTTTT+TGG | + | chr7_1:65968353-65968372 | Msa1031390:intron | 40.0% |
!! | CACAAGAAGGTGCTTATCAA+TGG | + | chr7_1:65968658-65968677 | Msa1031390:CDS | 40.0% |
! | GTTTTCTTATTGCGTGCTCA+TGG | + | chr7_1:65968721-65968740 | Msa1031390:intron | 40.0% |
TTAGAATGCATCCTGACTAG+AGG | + | chr7_1:65968786-65968805 | Msa1031390:intron | 40.0% | |
! | TTTAAGTTCCTACCAGTGGT+GGG | - | chr7_1:65968892-65968911 | None:intergenic | 40.0% |
! | ATTTAAGTTCCTACCAGTGG+TGG | - | chr7_1:65968893-65968912 | None:intergenic | 40.0% |
CATGTCTCATATTTACAGGG+AGG | - | chr7_1:65968955-65968974 | None:intergenic | 40.0% | |
TAAGAATATCTTCTGGGCTC+TGG | + | chr7_1:65969124-65969143 | Msa1031390:intron | 40.0% | |
TTCAAAACAGGGATGGGTAA+TGG | + | chr7_1:65969490-65969509 | Msa1031390:intron | 40.0% | |
TATTTACCGGTGTGAATTGG+TGG | - | chr7_1:65970357-65970376 | None:intergenic | 40.0% | |
TAACTACCTATTGGGGAACT+TGG | + | chr7_1:65970551-65970570 | Msa1031390:CDS | 40.0% | |
AACTACCTATTGGGGAACTT+GGG | + | chr7_1:65970552-65970571 | Msa1031390:CDS | 40.0% | |
AGGAACATCTCCTTGACATA+TGG | - | chr7_1:65970696-65970715 | None:intergenic | 40.0% | |
! | GGTAATATTTTCTTCCCCTG+AGG | - | chr7_1:65970716-65970735 | None:intergenic | 40.0% |
ATAGCATTAACTCATGGACC+TGG | + | chr7_1:65970815-65970834 | Msa1031390:intron | 40.0% | |
ACTGCAAAGTGTAAGTATCC+AGG | - | chr7_1:65970836-65970855 | None:intergenic | 40.0% | |
! | AGCTCGTGCAGAGATTTTAA+AGG | + | chr7_1:65970929-65970948 | Msa1031390:CDS | 40.0% |
GAAAACCCGTGTATCTTATC+TGG | + | chr7_1:65970966-65970985 | Msa1031390:CDS | 40.0% | |
TCAGAGCCAGATAAGATACA+CGG | - | chr7_1:65970975-65970994 | None:intergenic | 40.0% | |
!! | TGTATCTTATCTGGCTCTGA+TGG | + | chr7_1:65970975-65970994 | Msa1031390:CDS | 40.0% |
CAACTCAATCAAAACAGTGC+CGG | - | chr7_1:65971035-65971054 | None:intergenic | 40.0% | |
! | TCATTTAAGGCTTCATCCTC+TGG | + | chr7_1:65971211-65971230 | Msa1031390:CDS | 40.0% |
! | TTCATTTAAGCTTGCTCCAG+AGG | - | chr7_1:65971230-65971249 | None:intergenic | 40.0% |
! | CATATGAAGTGCACTTTTGG+TGG | + | chr7_1:65971301-65971320 | Msa1031390:CDS | 40.0% |
! | ACTTTTGGTGGGATATGGAA+TGG | + | chr7_1:65971313-65971332 | Msa1031390:CDS | 40.0% |
!! | TGCCTCATTTTTCTTTGACC+GGG | + | chr7_1:65971369-65971388 | Msa1031390:CDS | 40.0% |
AAATAAATACCTCAGCAGCC+CGG | - | chr7_1:65971390-65971409 | None:intergenic | 40.0% | |
TTGCCATATTCCTTGTTCAC+AGG | + | chr7_1:65971472-65971491 | Msa1031390:intron | 40.0% | |
ACAATTGCAACTGGTGAGTT+TGG | - | chr7_1:65971512-65971531 | None:intergenic | 40.0% | |
!!! | TGGCATTCTCGAGTTTTGTT+TGG | - | chr7_1:65971574-65971593 | None:intergenic | 40.0% |
! | AACTCGTGGATAAGTGGATT+TGG | - | chr7_1:65971594-65971613 | None:intergenic | 40.0% |
! | ACTTATCCACGAGTTGAAGA+GGG | + | chr7_1:65971599-65971618 | Msa1031390:CDS | 40.0% |
GAACCTTCCATATCTTTGCA+TGG | + | chr7_1:65971622-65971641 | Msa1031390:CDS | 40.0% | |
GATCCATGCAAAGATATGGA+AGG | - | chr7_1:65971628-65971647 | None:intergenic | 40.0% | |
!! | ACATTGCTTGTTGATGGGTT+TGG | + | chr7_1:65971662-65971681 | Msa1031390:CDS | 40.0% |
CAAGTGAAAGCAATAAGCGT+AGG | - | chr7_1:65971761-65971780 | None:intergenic | 40.0% | |
TGTTTGCAGGCATATATCCA+TGG | + | chr7_1:65971779-65971798 | Msa1031390:intron | 40.0% | |
TCCATGGCAAGAGATTACAT+TGG | + | chr7_1:65971795-65971814 | Msa1031390:CDS | 40.0% | |
ACCAATGTAATCTCTTGCCA+TGG | - | chr7_1:65971799-65971818 | None:intergenic | 40.0% | |
CGTAGATGATACTGCTTCAA+TGG | - | chr7_1:65971878-65971897 | None:intergenic | 40.0% | |
TTCTGATCACCATGAATGAC+AGG | - | chr7_1:65971973-65971992 | None:intergenic | 40.0% | |
!! | GCATCTGGGACTAATGATTT+TGG | + | chr7_1:65972255-65972274 | Msa1031390:three_prime_UTR | 40.0% |
GGTGGAGCCTGATATTGTTT+GGG | - | chr7_1:65967509-65967528 | None:intergenic | 45.0% | |
AGGTGGAGCCTGATATTGTT+TGG | - | chr7_1:65967510-65967529 | None:intergenic | 45.0% | |
!! | AGGAGGAGAAGTGGATTGAA+CGG | - | chr7_1:65967597-65967616 | None:intergenic | 45.0% |
!! | AGACAACAAGAAGAGTGCCA+CGG | - | chr7_1:65967709-65967728 | None:intergenic | 45.0% |
TCGCCTGATAAAAAATCCGG+TGG | + | chr7_1:65967827-65967846 | Msa1031390:CDS | 45.0% | |
!!! | GAGCCACCGGATTTTTTATC+AGG | - | chr7_1:65967833-65967852 | None:intergenic | 45.0% |
! | CGTGTTTTGCAGCTTAAACC+TGG | + | chr7_1:65968214-65968233 | Msa1031390:intron | 45.0% |
!! | GGAATCTCTGGTTTCCCTTT+TGG | + | chr7_1:65968273-65968292 | Msa1031390:CDS | 45.0% |
!! | GGTTTCCCTTTTGGAGAAAG+CGG | + | chr7_1:65968282-65968301 | Msa1031390:CDS | 45.0% |
TCAAAGACACCTGTTCGAGT+TGG | + | chr7_1:65968331-65968350 | Msa1031390:CDS | 45.0% | |
! | CAAAGACACCTGTTCGAGTT+GGG | + | chr7_1:65968332-65968351 | Msa1031390:CDS | 45.0% |
!! | AAAGACACCTGTTCGAGTTG+GGG | + | chr7_1:65968333-65968352 | Msa1031390:CDS | 45.0% |
!! | CAGGTTTAAGGGCTTTGGAA+GGG | + | chr7_1:65968456-65968475 | Msa1031390:CDS | 45.0% |
!! | AGGTTTAAGGGCTTTGGAAG+GGG | + | chr7_1:65968457-65968476 | Msa1031390:CDS | 45.0% |
TGCTGATGTGGTTACAGTGT+TGG | + | chr7_1:65968629-65968648 | Msa1031390:CDS | 45.0% | |
! | GATGTGGTTACAGTGTTGGA+TGG | + | chr7_1:65968633-65968652 | Msa1031390:CDS | 45.0% |
GTGTTGGATGGAACACAAGA+AGG | + | chr7_1:65968645-65968664 | Msa1031390:CDS | 45.0% | |
TCGTCAATTCTCCTCTAGTC+AGG | - | chr7_1:65968800-65968819 | None:intergenic | 45.0% | |
GACTCCAAGGAACACTTGTA+TGG | + | chr7_1:65969027-65969046 | Msa1031390:intron | 45.0% | |
! | TTGCGTTTTCACAAGAGGGT+CGG | - | chr7_1:65969412-65969431 | None:intergenic | 45.0% |
GTCATAATGCTGTTCTTCGG+AGG | - | chr7_1:65969894-65969913 | None:intergenic | 45.0% | |
! | CTTTTCCCAAGTTCCCCAAT+AGG | - | chr7_1:65970560-65970579 | None:intergenic | 45.0% |
ACTGTTGGGGTAGTTGATCT+TGG | + | chr7_1:65970591-65970610 | Msa1031390:CDS | 45.0% | |
! | ATCTGTTACTTGTGGAGCCA+TGG | - | chr7_1:65970664-65970683 | None:intergenic | 45.0% |
ATGGCTCCACAAGTAACAGA+TGG | + | chr7_1:65970663-65970682 | Msa1031390:CDS | 45.0% | |
TCCACAAGTAACAGATGGAG+AGG | + | chr7_1:65970668-65970687 | Msa1031390:CDS | 45.0% | |
! | TCCTCTCCATCTGTTACTTG+TGG | - | chr7_1:65970672-65970691 | None:intergenic | 45.0% |
TGGAGAGGATCCATATGTCA+AGG | + | chr7_1:65970683-65970702 | Msa1031390:CDS | 45.0% | |
ATGTCAAGGAGATGTTCCTC+AGG | + | chr7_1:65970697-65970716 | Msa1031390:CDS | 45.0% | |
TGTCAAGGAGATGTTCCTCA+GGG | + | chr7_1:65970698-65970717 | Msa1031390:CDS | 45.0% | |
CAGAGCCAGATAAGATACAC+GGG | - | chr7_1:65970974-65970993 | None:intergenic | 45.0% | |
! | AGTGCACTTTTGGTGGGATA+TGG | + | chr7_1:65971308-65971327 | Msa1031390:CDS | 45.0% |
TTTGGTGGGATATGGAATGG+TGG | + | chr7_1:65971316-65971335 | Msa1031390:CDS | 45.0% | |
AGCCCGGTCAAAGAAAAATG+AGG | - | chr7_1:65971374-65971393 | None:intergenic | 45.0% | |
CAGCCTGTGAACAAGGAATA+TGG | - | chr7_1:65971478-65971497 | None:intergenic | 45.0% | |
CATATTCCTTGTTCACAGGC+TGG | + | chr7_1:65971476-65971495 | Msa1031390:intron | 45.0% | |
ACAAAACCAGCCTGTGAACA+AGG | - | chr7_1:65971485-65971504 | None:intergenic | 45.0% | |
AGTTGCAATTGTTCGTCCTG+CGG | + | chr7_1:65971520-65971539 | Msa1031390:CDS | 45.0% | |
!! | TTTTGTTTGGCAAGCCTGCT+TGG | - | chr7_1:65971561-65971580 | None:intergenic | 45.0% |
CTCTTCAACTCGTGGATAAG+TGG | - | chr7_1:65971600-65971619 | None:intergenic | 45.0% | |
! | CACTTATCCACGAGTTGAAG+AGG | + | chr7_1:65971598-65971617 | Msa1031390:CDS | 45.0% |
! | CTTATCCACGAGTTGAAGAG+GGG | + | chr7_1:65971600-65971619 | Msa1031390:CDS | 45.0% |
!! | TGCTTGTTGATGGGTTTGGT+AGG | + | chr7_1:65971666-65971685 | Msa1031390:intron | 45.0% |
GAAACACTGCCTGTCATTCA+TGG | + | chr7_1:65971961-65971980 | Msa1031390:three_prime_UTR | 45.0% | |
! | TCTCATCTTGTTGTGGCATC+TGG | + | chr7_1:65972240-65972259 | Msa1031390:three_prime_UTR | 45.0% |
! | CTCATCTTGTTGTGGCATCT+GGG | + | chr7_1:65972241-65972260 | Msa1031390:three_prime_UTR | 45.0% |
!!! | ATATAAAAAGTATAATTATT+CGG | - | chr7_1:65971109-65971128 | None:intergenic | 5.0% |
TGAAACGACGTCGTGTAGTG+TGG | - | chr7_1:65967444-65967463 | None:intergenic | 50.0% | |
!! | AGGAGAAGTGGATTGAACGG+CGG | - | chr7_1:65967594-65967613 | None:intergenic | 50.0% |
GTTATCGGAAGGAGGAGAAG+TGG | - | chr7_1:65967606-65967625 | None:intergenic | 50.0% | |
TTTGGTGAATTCGGAGTCGG+AGG | - | chr7_1:65967633-65967652 | None:intergenic | 50.0% | |
TGAGCATACGCACTCAAACC+AGG | - | chr7_1:65968235-65968254 | None:intergenic | 50.0% | |
TCAGAAACCACAGCAAGCAG+CGG | + | chr7_1:65968252-65968271 | Msa1031390:CDS | 50.0% | |
!! | TTCCCTTTTGGAGAAAGCGG+AGG | + | chr7_1:65968285-65968304 | Msa1031390:CDS | 50.0% |
!! | TCCCTTTTGGAGAAAGCGGA+GGG | + | chr7_1:65968286-65968305 | Msa1031390:CDS | 50.0% |
ACCCTCCGCTTTCTCCAAAA+GGG | - | chr7_1:65968290-65968309 | None:intergenic | 50.0% | |
GTCTTTGATCGCAATTCCCG+TGG | - | chr7_1:65968319-65968338 | None:intergenic | 50.0% | |
GACTGCAGGTTTAAGGGCTT+TGG | + | chr7_1:65968451-65968470 | Msa1031390:CDS | 50.0% | |
!! | GCAGGTTTAAGGGCTTTGGA+AGG | + | chr7_1:65968455-65968474 | Msa1031390:CDS | 50.0% |
AATGGTTTCCCACCACTGGT+AGG | + | chr7_1:65968881-65968900 | Msa1031390:intron | 50.0% | |
! | CTGGGCTCTGGTCAACTTAA+AGG | + | chr7_1:65969136-65969155 | Msa1031390:intron | 50.0% |
TGACGCCGAAATTCATCCAG+TGG | - | chr7_1:65969847-65969866 | None:intergenic | 50.0% | |
TCCTAGCCACCAATTCACAC+CGG | + | chr7_1:65970348-65970367 | Msa1031390:intron | 50.0% | |
GTTGGGGTAGTTGATCTTGG+AGG | + | chr7_1:65970594-65970613 | Msa1031390:CDS | 50.0% | |
TGGAGGTGGATCTGTTCAGA+TGG | + | chr7_1:65970611-65970630 | Msa1031390:CDS | 50.0% | |
GTCAAGGAGATGTTCCTCAG+GGG | + | chr7_1:65970699-65970718 | Msa1031390:CDS | 50.0% | |
GCTCTCAGTTACTTGCGCTA+TGG | + | chr7_1:65970897-65970916 | Msa1031390:intron | 50.0% | |
! | ACACGGGTTTTCAGCATCAC+CGG | - | chr7_1:65970958-65970977 | None:intergenic | 50.0% |
!! | TCAATCAAAACAGTGCCGGC+TGG | - | chr7_1:65971031-65971050 | None:intergenic | 50.0% |
! | ATGCAAAAGCGTGGCTCACA+AGG | + | chr7_1:65971249-65971268 | Msa1031390:CDS | 50.0% |
! | GGATATGGAATGGTGGAGGT+GGG | + | chr7_1:65971323-65971342 | Msa1031390:CDS | 50.0% |
! | GATATGGAATGGTGGAGGTG+GGG | + | chr7_1:65971324-65971343 | Msa1031390:CDS | 50.0% |
GCAGGACGAACAATTGCAAC+TGG | - | chr7_1:65971521-65971540 | None:intergenic | 50.0% | |
! | TGTTCGTCCTGCGGATTTTG+AGG | + | chr7_1:65971529-65971548 | Msa1031390:CDS | 50.0% |
!! | TTTTGAGGATGCTGCCAAGC+AGG | + | chr7_1:65971544-65971563 | Msa1031390:CDS | 50.0% |
CGACGTCGTGTAGTGTGGTT+TGG | - | chr7_1:65967439-65967458 | None:intergenic | 55.0% | |
GATCCAGCTCTGTGTCTTGG+GGG | - | chr7_1:65967475-65967494 | None:intergenic | 55.0% | |
GGATCCAGCTCTGTGTCTTG+GGG | - | chr7_1:65967476-65967495 | None:intergenic | 55.0% | |
GGGATCCAGCTCTGTGTCTT+GGG | - | chr7_1:65967477-65967496 | None:intergenic | 55.0% | |
AGGGATCCAGCTCTGTGTCT+TGG | - | chr7_1:65967478-65967497 | None:intergenic | 55.0% | |
!! | ATCGGTAACGGATCTGACCG+TGG | - | chr7_1:65967550-65967569 | None:intergenic | 55.0% |
CGGAGGAAGGTGATCGGTAA+CGG | - | chr7_1:65967562-65967581 | None:intergenic | 55.0% | |
GTTCAGCGGAGGAAGGTGAT+CGG | - | chr7_1:65967568-65967587 | None:intergenic | 55.0% | |
TTGAACGGCGGAGAGTTCAG+CGG | - | chr7_1:65967582-65967601 | None:intergenic | 55.0% | |
GAGGAGTGGTTATCGGAAGG+AGG | - | chr7_1:65967614-65967633 | None:intergenic | 55.0% | |
TCGGAGGAGTGGTTATCGGA+AGG | - | chr7_1:65967617-65967636 | None:intergenic | 55.0% | |
GGAGTCGGAGGAGTGGTTAT+CGG | - | chr7_1:65967621-65967640 | None:intergenic | 55.0% | |
TGAATTCGGAGTCGGAGGAG+TGG | - | chr7_1:65967628-65967647 | None:intergenic | 55.0% | |
GCTCAAACGTCCAACTCGTC+AGG | + | chr7_1:65967655-65967674 | Msa1031390:CDS | 55.0% | |
GAGAGTGACTCCTGACGAGT+TGG | - | chr7_1:65967668-65967687 | None:intergenic | 55.0% | |
! | AGAGATTCCGCTGCTTGCTG+TGG | - | chr7_1:65968262-65968281 | None:intergenic | 55.0% |
ACAGCAAGCAGCGGAATCTC+TGG | + | chr7_1:65968261-65968280 | Msa1031390:CDS | 55.0% | |
CACCCTCCGCTTTCTCCAAA+AGG | - | chr7_1:65968291-65968310 | None:intergenic | 55.0% | |
!! | AAGCGGAGGGTGTTGTTCCA+CGG | + | chr7_1:65968299-65968318 | Msa1031390:CDS | 55.0% |
TGCAGGCGACTGCAGGTTTA+AGG | + | chr7_1:65968444-65968463 | Msa1031390:intron | 55.0% | |
GCAGGCGACTGCAGGTTTAA+GGG | + | chr7_1:65968445-65968464 | Msa1031390:intron | 55.0% | |
!! | GGCTTTGGAAGGGGATGCAT+CGG | + | chr7_1:65968466-65968485 | Msa1031390:CDS | 55.0% |
GAGGAATGGTTTCCCACCAC+TGG | + | chr7_1:65968877-65968896 | Msa1031390:intron | 55.0% | |
! | ACCGGTGTGAATTGGTGGCT+AGG | - | chr7_1:65970352-65970371 | None:intergenic | 55.0% |
GGGGTAGTTGATCTTGGAGG+TGG | + | chr7_1:65970597-65970616 | Msa1031390:CDS | 55.0% | |
GGTGGGATATGGAATGGTGG+AGG | + | chr7_1:65971319-65971338 | Msa1031390:CDS | 55.0% | |
! | GGGATATGGAATGGTGGAGG+TGG | + | chr7_1:65971322-65971341 | Msa1031390:CDS | 55.0% |
TTTCTTTGACCGGGCTGCTG+AGG | + | chr7_1:65971378-65971397 | Msa1031390:CDS | 55.0% | |
GCAGCATCCTCAAAATCCGC+AGG | - | chr7_1:65971539-65971558 | None:intergenic | 55.0% | |
AGGTTCCCCTCTTCAACTCG+TGG | - | chr7_1:65971608-65971627 | None:intergenic | 55.0% | |
ATACGACGATGCCCTTGTCG+AGG | + | chr7_1:65971831-65971850 | Msa1031390:CDS | 55.0% | |
GCTTCAATGGCGCTTCCTAG+CGG | - | chr7_1:65971865-65971884 | None:intergenic | 55.0% | |
CCACCTGCCACCACATCCAA+CGG | + | chr7_1:65967524-65967543 | Msa1031390:five_prime_UTR | 60.0% | |
!! | AGCGGAGGGTGTTGTTCCAC+GGG | + | chr7_1:65968300-65968319 | Msa1031390:CDS | 60.0% |
CCACACACCCCAACTCGAAC+AGG | - | chr7_1:65968343-65968362 | None:intergenic | 60.0% | |
!! | CCTGTTCGAGTTGGGGTGTG+TGG | + | chr7_1:65968340-65968359 | Msa1031390:intron | 60.0% |
!! | TTGGTGATGCAGGCGACTGC+AGG | + | chr7_1:65968437-65968456 | Msa1031390:intron | 60.0% |
CTCTCTGTATCCCTGCCAGC+CGG | + | chr7_1:65971013-65971032 | Msa1031390:intron | 60.0% | |
!! | CAAAACAGTGCCGGCTGGCA+GGG | - | chr7_1:65971026-65971045 | None:intergenic | 60.0% |
!! | TCAAAACAGTGCCGGCTGGC+AGG | - | chr7_1:65971027-65971046 | None:intergenic | 60.0% |
! | TGGAATGGTGGAGGTGGGGA+TGG | + | chr7_1:65971328-65971347 | Msa1031390:CDS | 60.0% |
ATGCCCTTGTCGAGGCAGCT+TGG | + | chr7_1:65971839-65971858 | Msa1031390:CDS | 60.0% | |
CCAGCTCTGTGTCTTGGGGG+TGG | - | chr7_1:65967472-65967491 | None:intergenic | 65.0% | |
CCACCCCCAAGACACAGAGC+TGG | + | chr7_1:65967469-65967488 | Msa1031390:five_prime_UTR | 65.0% | |
CCGTTGGATGTGGTGGCAGG+TGG | - | chr7_1:65967527-65967546 | None:intergenic | 65.0% | |
TGGCCGTTGGATGTGGTGGC+AGG | - | chr7_1:65967530-65967549 | None:intergenic | 65.0% | |
GCCACCACATCCAACGGCCA+CGG | + | chr7_1:65967530-65967549 | Msa1031390:five_prime_UTR | 65.0% | |
ACCGTGGCCGTTGGATGTGG+TGG | - | chr7_1:65967534-65967553 | None:intergenic | 65.0% | |
CTGACCGTGGCCGTTGGATG+TGG | - | chr7_1:65967537-65967556 | None:intergenic | 65.0% | |
ACGGATCTGACCGTGGCCGT+TGG | - | chr7_1:65967543-65967562 | None:intergenic | 65.0% | |
GCGGAGAGTTCAGCGGAGGA+AGG | - | chr7_1:65967575-65967594 | None:intergenic | 65.0% | |
AACGGCGGAGAGTTCAGCGG+AGG | - | chr7_1:65967579-65967598 | None:intergenic | 65.0% | |
CGGCTGGCAGGGATACAGAG+AGG | - | chr7_1:65971015-65971034 | None:intergenic | 65.0% | |
CGGCCAAGCTGCCTCGACAA+GGG | - | chr7_1:65971845-65971864 | None:intergenic | 65.0% | |
GCGGCCAAGCTGCCTCGACA+AGG | - | chr7_1:65971846-65971865 | None:intergenic | 70.0% | |
GTCGAGGCAGCTTGGCCGCT+AGG | + | chr7_1:65971847-65971866 | Msa1031390:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 65967160 | 65972440 | 65967160 | ID=Msa1031390;Name=Msa1031390 |
chr7_1 | mRNA | 65967160 | 65972440 | 65967160 | ID=Msa1031390-mRNA-1;Parent=Msa1031390;Name=Msa1031390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=493|1|1|1|1|1|9|540|467 |
chr7_1 | exon | 65967160 | 65967964 | 65967160 | ID=Msa1031390-mRNA-1:exon:14704;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65968226 | 65968354 | 65968226 | ID=Msa1031390-mRNA-1:exon:14705;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65968449 | 65968505 | 65968449 | ID=Msa1031390-mRNA-1:exon:14706;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65968588 | 65968680 | 65968588 | ID=Msa1031390-mRNA-1:exon:14707;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65970543 | 65970748 | 65970543 | ID=Msa1031390-mRNA-1:exon:14708;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65970905 | 65970996 | 65970905 | ID=Msa1031390-mRNA-1:exon:14709;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65971188 | 65971399 | 65971188 | ID=Msa1031390-mRNA-1:exon:14710;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65971494 | 65971683 | 65971494 | ID=Msa1031390-mRNA-1:exon:14711;Parent=Msa1031390-mRNA-1 |
chr7_1 | exon | 65971788 | 65972440 | 65971788 | ID=Msa1031390-mRNA-1:exon:14712;Parent=Msa1031390-mRNA-1 |
chr7_1 | five_prime_UTR | 65967160 | 65967652 | 65967160 | ID=Msa1031390-mRNA-1:five_prime_utr;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65967653 | 65967964 | 65967653 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65968226 | 65968354 | 65968226 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65968449 | 65968505 | 65968449 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65968588 | 65968680 | 65968588 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65970543 | 65970748 | 65970543 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65970905 | 65970996 | 65970905 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65971188 | 65971399 | 65971188 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65971494 | 65971683 | 65971494 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | CDS | 65971788 | 65971900 | 65971788 | ID=Msa1031390-mRNA-1:cds;Parent=Msa1031390-mRNA-1 |
chr7_1 | three_prime_UTR | 65971901 | 65972440 | 65971901 | ID=Msa1031390-mRNA-1:three_prime_utr;Parent=Msa1031390-mRNA-1 |
Gene Sequence |
Protein sequence |