AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0366510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366510 MtrunA17_Chr3g0107511 92.531 482 26 1 1 472 1 482 0.0 917
Msa0366510 MtrunA17_Chr3g0107501 78.794 481 92 1 1 471 1 481 0.0 779
Msa0366510 MtrunA17_Chr5g0443731 40.848 448 253 4 30 467 26 471 5.27e-117 352
Msa0366510 MtrunA17_Chr5g0443401 34.232 482 297 5 1 467 1 477 4.55e-101 311
Msa0366510 MtrunA17_Chr8g0380471 36.632 475 278 9 8 466 8 475 4.30e-99 306
Msa0366510 MtrunA17_Chr8g0388921 34.183 471 294 5 8 467 12 477 1.05e-95 297
Msa0366510 MtrunA17_Chr5g0408181 31.590 478 290 11 8 467 5 463 2.00e-69 228
Msa0366510 MtrunA17_Chr1g0153371 30.983 468 300 8 8 463 9 465 9.65e-67 222
Msa0366510 MtrunA17_Chr4g0044851 30.543 442 284 6 33 463 37 466 3.47e-65 217
Msa0366510 MtrunA17_Chr5g0403931 29.630 486 318 7 3 470 4 483 8.68e-65 216
Msa0366510 MtrunA17_Chr1g0164371 30.638 470 302 7 6 464 17 473 2.21e-64 215
Msa0366510 MtrunA17_Chr8g0380931 29.515 454 291 9 30 464 59 502 3.14e-64 216
Msa0366510 MtrunA17_Chr8g0369791 32.174 460 278 12 20 464 22 462 1.38e-63 213
Msa0366510 MtrunA17_Chr4g0044841 30.065 459 296 9 19 464 23 469 2.63e-59 202
Msa0366510 MtrunA17_Chr8g0341951 28.446 457 304 8 8 452 12 457 1.35e-56 194
Msa0366510 MtrunA17_Chr5g0397971 26.115 471 327 7 9 464 3 467 6.37e-55 190
Msa0366510 MtrunA17_Chr7g0226771 28.571 455 297 8 1 439 1 443 2.21e-53 186
Msa0366510 MtrunA17_Chr2g0293411 26.875 480 331 8 7 470 15 490 1.07e-52 184
Msa0366510 MtrunA17_Chr8g0373441 29.250 400 258 6 12 395 14 404 5.72e-51 178
Msa0366510 MtrunA17_Chr5g0400411 27.473 455 304 9 28 464 40 486 1.19e-50 179
Msa0366510 MtrunA17_Chr5g0400421 27.193 456 305 10 28 464 40 487 1.43e-50 179
Msa0366510 MtrunA17_Chr3g0141801 27.079 469 310 8 5 453 13 469 2.32e-50 178
Msa0366510 MtrunA17_Chr8g0381541 28.475 446 289 12 33 457 43 479 3.23e-50 178
Msa0366510 MtrunA17_Chr3g0113321 27.293 447 295 8 32 458 28 464 1.56e-49 176
Msa0366510 MtrunA17_Chr2g0293421 26.770 452 311 8 32 469 44 489 1.34e-47 171
Msa0366510 MtrunA17_Chr8g0381571 28.842 423 271 12 33 434 43 456 1.93e-47 170
Msa0366510 MtrunA17_Chr8g0372711 26.829 451 299 11 8 440 20 457 7.53e-47 169
Msa0366510 MtrunA17_Chr7g0219961 26.170 470 315 12 7 464 11 460 2.54e-45 164
Msa0366510 MtrunA17_Chr3g0078411 27.004 474 305 13 7 463 11 460 1.21e-44 162
Msa0366510 MtrunA17_Chr8g0372411 27.123 424 280 8 34 439 40 452 7.74e-44 160
Msa0366510 MtrunA17_Chr6g0455461 27.004 474 305 14 7 463 11 460 8.18e-44 160
Msa0366510 MtrunA17_Chr8g0339861 29.054 444 284 10 33 457 45 476 2.49e-42 156
Msa0366510 MtrunA17_Chr3g0089361 25.726 482 314 14 5 463 13 473 2.59e-38 145
Msa0366510 MtrunA17_Chr6g0478161 25.652 460 305 11 7 442 20 466 8.48e-37 141
Msa0366510 MtrunA17_Chr3g0089351 24.877 406 276 10 72 463 1 391 1.78e-36 139
Msa0366510 MtrunA17_Chr8g0381551 27.303 304 202 11 33 325 43 338 1.70e-24 103
Msa0366510 MtrunA17_Chr1g0161671 25.240 313 220 7 7 312 6 311 1.55e-23 100
Msa0366510 MtrunA17_Chr5g0404881 30.870 230 141 7 7 226 8 229 1.92e-21 93.2
Msa0366510 MtrunA17_Chr4g0000171 26.207 290 204 6 27 311 37 321 2.82e-21 94.7
Msa0366510 MtrunA17_Chr8g0334891 24.115 452 299 14 20 444 25 459 9.98e-21 94.7
Msa0366510 MtrunA17_Chr4g0000161 25.818 275 194 6 24 293 34 303 5.38e-20 90.9
Msa0366510 MtrunA17_Chr6g0458561 24.635 479 285 19 8 430 28 486 8.66e-20 92.0
Msa0366510 MtrunA17_Chr4g0013471 26.490 302 190 6 27 312 37 322 1.89e-19 90.1
Msa0366510 MtrunA17_Chr5g0436981 31.148 122 84 0 26 147 21 142 5.66e-19 84.7
Msa0366510 MtrunA17_Chr2g0286091 21.946 483 320 15 28 469 36 502 7.05e-19 89.4
Msa0366510 MtrunA17_Chr8g0334941 26.642 274 174 8 193 444 36 304 1.00e-18 87.0
Msa0366510 MtrunA17_Chr4g0047631 23.605 466 314 16 7 439 22 478 1.29e-17 85.5
Msa0366510 MtrunA17_Chr0c19g0493771 23.543 446 271 15 40 435 189 614 3.71e-17 84.3
Msa0366510 MtrunA17_Chr4g0058231 23.395 483 303 16 7 439 2 467 7.79e-17 82.8
Msa0366510 MtrunA17_Chr6g0463551 32.203 177 105 3 199 360 13 189 1.92e-16 77.8
Msa0366510 MtrunA17_Chr5g0404861 32.192 146 97 1 321 466 15 158 2.82e-16 76.3
Msa0366510 MtrunA17_Chr1g0160851 23.326 463 316 13 7 439 10 463 3.34e-16 80.9
Msa0366510 MtrunA17_Chr2g0314721 24.385 488 308 15 8 453 19 487 4.01e-16 80.9
Msa0366510 MtrunA17_Chr4g0047691 23.039 408 282 12 62 439 76 481 5.45e-16 80.5
Msa0366510 MtrunA17_Chr1g0205361 24.043 470 304 17 7 439 10 463 7.95e-16 79.7
Msa0366510 MtrunA17_Chr4g0000151 32.558 129 84 2 328 456 6 131 1.42e-15 73.9
Msa0366510 MtrunA17_Chr2g0314731 24.025 487 311 19 7 453 9 476 2.62e-15 78.2
Msa0366510 MtrunA17_Chr6g0463541 34.783 92 57 1 357 448 3 91 3.11e-15 71.6
Msa0366510 MtrunA17_Chr5g0437001 36.111 108 68 1 328 434 1 108 3.27e-15 73.2
Msa0366510 MtrunA17_Chr5g0395321 24.576 472 308 17 12 446 13 473 3.45e-15 77.8
Msa0366510 MtrunA17_Chr3g0116741 27.638 199 127 6 255 439 286 481 8.22e-15 76.6
Msa0366510 MtrunA17_Chr4g0047661 22.863 468 321 16 7 439 21 483 1.56e-14 75.9
Msa0366510 MtrunA17_Chr2g0310381 20.312 448 306 11 26 433 21 457 2.04e-14 75.5
Msa0366510 MtrunA17_Chr1g0197881 24.078 461 290 16 1 422 4 443 2.45e-14 75.1
Msa0366510 MtrunA17_Chr6g0463561 30.000 140 96 2 8 146 14 152 3.80e-14 71.2
Msa0366510 MtrunA17_Chr4g0053621 21.472 489 312 15 7 446 5 470 4.06e-14 74.3
Msa0366510 MtrunA17_Chr3g0101731 24.176 455 300 15 8 422 1 450 4.49e-14 74.3
Msa0366510 MtrunA17_Chr8g0381561 32.407 108 71 1 327 434 2 107 4.70e-14 68.9
Msa0366510 MtrunA17_Chr5g0409051 22.105 475 320 19 12 440 8 478 7.84e-14 73.6
Msa0366510 MtrunA17_Chr6g0466941 23.327 523 312 20 15 467 13 516 8.17e-14 73.6
Msa0366510 MtrunA17_Chr3g0101671 24.051 474 294 19 9 430 5 464 9.72e-14 73.2
Msa0366510 MtrunA17_Chr1g0197891 23.326 463 280 16 7 422 10 444 1.48e-13 72.8
Msa0366510 MtrunA17_Chr8g0382901 21.475 461 318 13 7 443 5 445 2.02e-13 72.8
Msa0366510 MtrunA17_Chr8g0382901 22.747 466 307 15 15 443 475 924 1.92e-12 69.7
Msa0366510 MtrunA17_Chr1g0207841 25.945 397 229 14 99 451 117 492 2.33e-13 72.0
Msa0366510 MtrunA17_Chr4g0058281 29.341 167 107 4 283 439 314 479 2.51e-13 72.0
Msa0366510 MtrunA17_Chr8g0339311 24.726 457 275 19 20 422 32 473 2.61e-13 72.0
Msa0366510 MtrunA17_Chr1g0197851 23.974 463 289 17 1 422 4 444 3.06e-13 71.6
Msa0366510 MtrunA17_Chr7g0258221 23.183 509 284 18 1 439 1 472 3.36e-13 71.6
Msa0366510 MtrunA17_Chr1g0164321 21.858 366 225 13 157 469 192 549 3.84e-13 71.6
Msa0366510 MtrunA17_Chr4g0030701 23.093 472 292 13 34 451 36 490 3.92e-13 71.6
Msa0366510 MtrunA17_Chr8g0370641 20.648 494 327 15 1 440 6 488 5.59e-13 70.9
Msa0366510 MtrunA17_Chr7g0246131 24.795 488 304 19 7 446 8 480 5.64e-13 70.9
Msa0366510 MtrunA17_Chr1g0151221 25.794 252 159 10 216 448 265 507 5.81e-13 70.9
Msa0366510 MtrunA17_Chr8g0344151 23.261 460 285 17 32 443 35 474 9.30e-13 70.1
Msa0366510 MtrunA17_Chr4g0004601 23.232 396 263 16 62 425 102 488 1.19e-12 70.1
Msa0366510 MtrunA17_Chr7g0260831 24.062 453 260 23 27 422 29 454 1.22e-12 69.7
Msa0366510 MtrunA17_Chr4g0047641 26.904 197 133 4 254 439 286 482 1.75e-12 69.3
Msa0366510 MtrunA17_Chr4g0074581 21.946 442 279 16 26 416 62 488 1.80e-12 69.3
Msa0366510 MtrunA17_Chr8g0344191 21.206 481 312 18 7 439 43 504 2.29e-12 68.9
Msa0366510 MtrunA17_Chr2g0288661 25.092 271 170 11 178 426 217 476 2.52e-12 68.9
Msa0366510 MtrunA17_Chr4g0026941 26.538 260 165 8 225 467 289 539 5.52e-12 67.8
Msa0366510 MtrunA17_Chr1g0161651 22.184 293 165 6 27 267 37 318 6.15e-12 66.6
Msa0366510 MtrunA17_Chr1g0160861 23.986 296 202 8 166 439 10 304 6.54e-12 66.6
Msa0366510 MtrunA17_Chr7g0235261 23.410 393 254 13 68 425 87 467 8.57e-12 67.4
Msa0366510 MtrunA17_Chr2g0313821 21.483 526 318 19 1 452 1 505 9.25e-12 67.0
Msa0366510 MtrunA17_Chr1g0197871 31.694 183 109 5 252 422 266 444 1.42e-11 66.6
Msa0366510 MtrunA17_Chr3g0101571 22.022 445 302 14 33 443 36 469 2.02e-11 65.9
Msa0366510 MtrunA17_Chr1g0200961 23.517 472 307 16 8 439 6 463 2.27e-11 65.9
Msa0366510 MtrunA17_Chr7g0235551 19.415 479 329 14 7 439 7 474 2.79e-11 65.5
Msa0366510 MtrunA17_Chr7g0265611 20.993 443 307 14 17 422 30 466 2.94e-11 65.5
Msa0366510 MtrunA17_Chr2g0334021 21.042 480 312 17 39 470 41 501 3.00e-11 65.5
Msa0366510 MtrunA17_Chr4g0058201 22.573 443 305 14 28 439 23 458 4.65e-11 64.7
Msa0366510 MtrunA17_Chr2g0313791 24.370 238 151 8 215 430 243 473 5.73e-11 64.7
Msa0366510 MtrunA17_Chr3g0101601 22.650 468 300 18 15 439 15 463 6.10e-11 64.7
Msa0366510 MtrunA17_Chr8g0370651 26.147 218 148 4 236 440 275 492 7.61e-11 64.3
Msa0366510 MtrunA17_Chr3g0094231 22.343 461 308 16 24 446 27 475 9.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366510 AT5G36110.1 34.773 463 276 8 22 467 23 476 4.41e-89 280
Msa0366510 AT2G42850.1 31.982 444 286 5 36 469 48 485 8.79e-83 264
Msa0366510 AT5G45340.1 31.330 466 291 9 11 465 13 460 2.77e-70 231
Msa0366510 AT4G19230.1 31.857 474 290 10 4 462 2 457 3.75e-70 231
Msa0366510 AT4G19230.2 32.159 454 275 10 4 442 2 437 1.05e-66 222
Msa0366510 AT5G45340.2 31.724 435 268 9 11 434 13 429 8.66e-65 216
Msa0366510 AT2G29090.2 29.670 455 289 7 27 466 43 481 1.17e-64 216
Msa0366510 AT2G29090.1 29.670 455 289 7 27 466 43 481 1.17e-64 216
Msa0366510 AT3G19270.2 29.550 467 302 10 5 460 9 459 4.98e-63 212
Msa0366510 AT3G19270.1 29.478 441 284 10 5 434 9 433 8.30e-59 200
Msa0366510 AT5G36110.2 32.692 364 222 6 22 369 23 379 4.94e-57 194
Msa0366510 AT1G12740.1 26.966 445 304 8 33 464 31 467 1.92e-55 192
Msa0366510 AT2G32440.2 28.067 481 316 12 6 464 12 484 5.83e-53 186
Msa0366510 AT2G32440.1 28.067 481 316 12 6 464 12 484 5.83e-53 186
Msa0366510 AT1G12740.4 26.608 451 304 9 33 464 31 473 6.70e-53 185
Msa0366510 AT1G12740.2 26.386 451 305 9 33 464 31 473 1.21e-52 184
Msa0366510 AT1G05160.2 26.906 446 309 8 33 464 45 487 2.66e-52 184
Msa0366510 AT1G05160.1 26.906 446 309 8 33 464 45 487 2.66e-52 184
Msa0366510 AT4G36380.1 26.887 424 289 6 33 440 69 487 1.01e-51 183
Msa0366510 AT3G13730.1 28.266 467 291 11 24 465 42 489 4.31e-51 181
Msa0366510 AT2G29090.3 28.212 397 258 6 85 466 2 386 6.46e-51 177
Msa0366510 AT3G50660.1 26.151 478 302 6 32 464 38 509 2.22e-50 179
Msa0366510 AT5G05690.1 27.664 441 295 9 32 456 30 462 3.21e-50 178
Msa0366510 AT3G13730.2 28.440 436 270 10 24 434 42 460 1.77e-49 176
Msa0366510 AT1G19630.1 25.983 458 316 10 8 450 8 457 2.09e-49 176
Msa0366510 AT5G38970.1 28.243 478 306 13 8 466 5 464 3.71e-49 175
Msa0366510 AT5G14400.2 27.273 451 270 12 38 466 1 415 6.39e-49 173
Msa0366510 AT1G19630.3 26.222 450 309 10 8 442 8 449 4.39e-48 172
Msa0366510 AT5G14400.3 27.924 419 245 11 38 434 1 384 7.89e-48 169
Msa0366510 AT2G42850.2 29.565 345 228 5 36 369 48 388 2.31e-47 168
Msa0366510 AT3G30180.1 26.819 481 315 12 1 466 6 464 8.43e-46 166
Msa0366510 AT5G36140.1 32.566 304 192 6 17 315 17 312 2.53e-44 158
Msa0366510 AT5G05690.2 27.394 376 254 7 32 396 30 397 1.60e-42 155
Msa0366510 AT1G73340.1 25.902 471 322 10 13 467 21 480 3.06e-42 157
Msa0366510 AT3G50660.2 26.406 409 261 4 32 405 38 441 3.09e-42 155
Msa0366510 AT1G19630.2 26.415 424 291 10 8 416 8 425 5.51e-42 155
Msa0366510 AT5G36130.1 46.099 141 73 2 328 467 1 139 1.85e-41 145
Msa0366510 AT5G38970.3 28.747 407 255 11 7 394 4 394 5.73e-41 152
Msa0366510 AT5G14400.4 28.696 345 209 9 38 360 1 330 3.22e-38 142
Msa0366510 AT1G55940.2 26.395 466 314 15 8 453 22 478 4.47e-38 145
Msa0366510 AT1G12740.3 27.059 340 230 5 33 360 31 364 2.45e-37 140
Msa0366510 AT3G44970.1 26.846 447 304 8 33 464 35 473 3.75e-37 142
Msa0366510 AT1G55940.1 26.622 447 300 14 8 434 22 460 4.16e-37 142
Msa0366510 AT5G48000.2 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.4 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.7 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.6 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.5 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.3 26.535 456 294 14 33 464 35 473 3.06e-35 137
Msa0366510 AT5G48000.1 26.535 456 294 14 33 464 76 514 6.54e-35 137
Msa0366510 AT5G38970.2 26.854 391 258 10 91 466 6 383 3.91e-34 132
Msa0366510 AT5G38970.4 26.854 391 258 10 91 466 6 383 3.91e-34 132
Msa0366510 AT4G36380.2 25.656 343 235 5 33 360 69 406 1.35e-33 131
Msa0366510 AT1G65670.1 24.228 421 286 8 31 435 33 436 3.27e-33 131
Msa0366510 AT5G14400.1 25.505 396 237 12 93 466 2 361 7.88e-32 125
Msa0366510 AT4G15300.2 24.742 485 321 15 5 464 2 467 3.05e-31 125
Msa0366510 AT1G78490.1 25.227 440 296 13 33 452 35 461 3.84e-31 125
Msa0366510 AT4G15300.3 24.576 472 313 14 18 464 4 457 5.69e-31 125
Msa0366510 AT4G15396.1 23.899 477 315 16 1 451 1 455 5.76e-29 119
Msa0366510 AT4G15393.2 25.057 435 294 15 33 451 35 453 5.84e-29 119
Msa0366510 AT4G15396.3 23.427 461 307 13 1 435 1 441 3.39e-28 117
Msa0366510 AT5G05690.3 26.936 297 197 7 175 456 52 343 4.45e-26 109
Msa0366510 AT2G29090.4 25.763 295 201 5 27 316 43 324 6.44e-25 105
Msa0366510 AT4G15396.2 22.851 477 299 16 1 451 1 434 1.50e-23 103
Msa0366510 AT4G15300.1 22.874 494 316 16 18 464 4 479 1.65e-22 100
Msa0366510 AT1G78490.2 24.804 383 256 12 33 395 35 405 4.84e-22 98.6
Msa0366510 AT2G28860.1 22.152 474 320 14 27 467 31 488 6.14e-22 99.0
Msa0366510 AT2G28850.1 22.246 472 318 14 29 467 33 488 3.35e-21 96.7
Msa0366510 AT5G04630.1 22.634 486 320 17 7 448 12 485 7.55e-21 95.9
Msa0366510 AT4G15396.4 22.857 420 279 13 1 395 1 400 1.90e-20 93.6
Msa0366510 AT2G34490.1 23.353 501 324 18 6 467 13 492 6.02e-20 92.8
Msa0366510 AT4G15393.1 22.525 404 284 12 8 396 10 399 1.02e-19 91.3
Msa0366510 AT2G26170.1 23.620 453 279 16 32 431 45 483 1.46e-19 91.7
Msa0366510 AT4G15310.1 22.314 484 330 19 10 464 4 470 1.89e-19 91.3
Msa0366510 AT2G26170.2 30.769 234 136 10 216 431 175 400 3.50e-19 90.1
Msa0366510 AT1G31800.1 23.690 439 279 14 40 435 110 535 3.25e-17 84.7
Msa0366510 AT5G24950.1 25.105 474 304 20 4 439 2 462 3.56e-16 81.3
Msa0366510 AT3G30290.1 21.550 413 283 11 73 464 5 397 4.88e-16 80.5
Msa0366510 AT1G11600.1 23.494 498 291 17 32 463 34 507 1.31e-14 76.6
Msa0366510 AT5G63450.2 22.481 516 335 21 1 467 61 560 2.14e-14 75.9
Msa0366510 AT5G63450.1 22.481 516 335 21 1 467 3 502 2.37e-14 75.5
Msa0366510 AT3G53130.1 25.000 236 152 8 230 449 293 519 3.10e-14 75.5
Msa0366510 AT5G47990.1 22.871 411 274 15 67 439 72 477 5.73e-14 74.3
Msa0366510 AT5G06905.1 22.515 493 308 20 13 448 11 486 5.86e-14 74.3
Msa0366510 AT5G08250.1 21.751 354 237 10 109 422 77 430 1.04e-13 73.6
Msa0366510 AT5G08250.2 21.751 354 237 10 109 422 139 492 1.36e-13 73.6
Msa0366510 AT3G28740.1 24.809 262 177 7 192 442 216 468 2.62e-13 72.4
Msa0366510 AT3G44970.2 24.375 320 224 5 33 339 35 349 2.67e-13 71.6
Msa0366510 AT4G37410.1 21.074 503 338 17 7 468 2 486 3.67e-13 72.0
Msa0366510 AT1G33720.1 22.152 474 318 15 7 439 10 473 6.04e-13 71.2
Msa0366510 AT4G37370.1 23.276 232 161 5 222 445 240 462 7.00e-13 70.9
Msa0366510 AT3G20110.1 21.941 474 313 16 7 440 12 468 7.20e-13 70.9
Msa0366510 AT2G22330.1 20.998 481 329 14 14 448 36 511 1.04e-12 70.5
Msa0366510 AT2G22330.2 21.186 472 321 14 14 439 59 525 1.06e-12 70.5
Msa0366510 AT3G26270.1 23.707 464 294 19 27 446 26 473 1.80e-12 69.7
Msa0366510 AT4G12330.1 21.065 413 276 12 68 439 76 479 1.97e-12 69.7
Msa0366510 AT4G37360.1 23.762 202 142 4 254 447 268 465 2.84e-12 69.3
Msa0366510 AT1G16400.1 20.370 486 321 17 12 439 18 495 7.25e-12 67.8
Msa0366510 AT3G26280.1 23.126 467 302 19 17 440 18 470 7.59e-12 67.8
Msa0366510 AT3G26280.2 23.126 467 302 19 17 440 35 487 9.27e-12 67.4
Msa0366510 AT4G15110.1 24.651 215 115 8 256 430 332 539 1.01e-11 67.8
Msa0366510 AT1G75130.1 24.518 363 241 11 96 435 118 470 1.57e-11 67.0
Msa0366510 AT3G26210.1 22.816 412 272 14 69 440 62 467 1.86e-11 66.6
Msa0366510 AT4G37400.1 21.548 478 321 15 7 445 2 464 2.17e-11 66.2
Msa0366510 AT5G35715.1 21.760 409 263 14 81 443 9 406 2.72e-11 65.9
Msa0366510 AT3G26170.1 21.992 482 312 17 5 439 3 467 3.13e-11 65.9
Msa0366510 AT2G45550.1 22.467 454 299 18 7 418 10 452 3.60e-11 65.9
Msa0366510 AT2G26710.1 24.202 376 231 14 102 430 109 477 3.75e-11 65.9
Msa0366510 AT1G13110.1 23.173 479 309 17 8 439 3 469 4.96e-11 65.1
Msa0366510 AT3G61040.1 25.313 399 236 12 69 422 64 445 6.51e-11 64.7
Msa0366510 AT4G15360.1 21.921 479 330 16 7 447 14 486 7.15e-11 64.7

Find 97 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTCTTGTTTAGGTATAT+TGG 0.191911 3_1:-61392603 Msa0366510:intron
TCTCCTACAGTGTTTATTAT+TGG 0.211025 3_1:-61398322 Msa0366510:CDS
TTTCTTGTCTTCTTGCAATA+AGG 0.216651 3_1:-61393391 Msa0366510:CDS
CTCCCTTGTTTGGTGGATTT+AGG 0.221627 3_1:-61392766 Msa0366510:CDS
ATTTCCCTGGCACCTCATTT+TGG 0.224462 3_1:-61393520 Msa0366510:CDS
CAATTCTTGCCCTAGCCTTT+TGG 0.243401 3_1:+61393492 None:intergenic
TCTTTGGGGTATCCTATTAT+TGG 0.246365 3_1:-61398451 Msa0366510:CDS
CAAACTCTAGCTGAACTTAT+AGG 0.256495 3_1:-61398211 Msa0366510:CDS
AAATGTTCCAAAAGGGTCTT+TGG 0.266253 3_1:-61398467 Msa0366510:CDS
CTTCCTTAGGTCTACAAGTT+AGG 0.275168 3_1:-61392327 Msa0366510:CDS
CAAGGATATGACATCCAAAA+AGG 0.281190 3_1:-61392719 Msa0366510:CDS
CAAGGAAACAAGTTTATTCT+TGG 0.285786 3_1:-61398295 Msa0366510:CDS
GTTTCTTGTTTAGGTATATT+GGG 0.287130 3_1:-61392602 Msa0366510:intron
TTCTTGTCTTCTTGCAATAA+GGG 0.290028 3_1:-61393390 Msa0366510:CDS
TTAAGTGTCTCTCCAATAAT+AGG 0.299924 3_1:+61398439 None:intergenic
CTCTTATGAGCTTGATGATA+TGG 0.317159 3_1:-61393283 Msa0366510:CDS
CCCTTTACTTACCTTCCATT+TGG 0.318147 3_1:-61392487 Msa0366510:CDS
TCCCTTCGTTTGTTCATAAT+AGG 0.358798 3_1:+61393455 None:intergenic
CGAGATGGTTCAAACTTGTA+TGG 0.363230 3_1:+61392538 None:intergenic
GTGCAGGCACAGGTTGGTGA+AGG 0.369965 3_1:-61393789 Msa0366510:intron
GGATACCCCAAAGACCCTTT+TGG 0.372327 3_1:+61398460 None:intergenic
AATGTTCCAAAAGGGTCTTT+GGG 0.394589 3_1:-61398466 Msa0366510:CDS
AGGATGATCCCTCCCTTGTT+TGG 0.399326 3_1:-61392776 Msa0366510:CDS
ACTTACCTTCCATTTGGTGC+AGG 0.402034 3_1:-61392481 Msa0366510:CDS
TGTAGACCTAAGGAAGGATA+TGG 0.415745 3_1:+61392334 None:intergenic
GAAGAAGCTGTCCTATGATA+TGG 0.421241 3_1:-61393639 Msa0366510:CDS
TAAGAAGATATATTACATCT+TGG 0.430086 3_1:+61392298 None:intergenic
ATGATCCCTCCCTTGTTTGG+TGG 0.435807 3_1:-61392773 Msa0366510:CDS
GCATAGGAAATGAGTTTGCC+AGG 0.442163 3_1:-61392447 Msa0366510:CDS
GAAGAAAGGGTATCAAAGTA+TGG 0.444140 3_1:-61398373 Msa0366510:CDS
AGGTAAGTAAAGGGTGGGAT+TGG 0.449267 3_1:+61392496 None:intergenic
CCTACCATTCAAAAGATACT+TGG 0.452384 3_1:-61398238 Msa0366510:CDS
TGACGAGTAATAGTTTCCTC+TGG 0.457822 3_1:+61392364 None:intergenic
AGTAAAGGGTGGGATTGGCT+TGG 0.462672 3_1:+61392501 None:intergenic
TTATGAAGCCCTGCACCAAA+TGG 0.466953 3_1:+61392472 None:intergenic
CCTATGCCATATCCTTCCTT+AGG 0.469443 3_1:-61392340 Msa0366510:CDS
CGAAGGGAGGATTTGTCAAA+AGG 0.471599 3_1:-61393440 Msa0366510:CDS
CTTACCTTCCATTTGGTGCA+GGG 0.476598 3_1:-61392480 Msa0366510:CDS
TTTGGAGAGGCCAAAAGGCT+AGG 0.490275 3_1:-61393502 Msa0366510:CDS
CACAAGGGAAATACTGTTTG+AGG 0.492920 3_1:-61393585 Msa0366510:CDS
GAGGTGCCAGGGAAATTGAT+TGG 0.495782 3_1:+61393527 None:intergenic
CCTCTCCAAAATGAGGTGCC+AGG 0.496307 3_1:+61393515 None:intergenic
AATCCTAACTTGTAGACCTA+AGG 0.510863 3_1:+61392324 None:intergenic
CAGGCACAGGTTGGTGAAGG+GGG 0.515122 3_1:-61393786 Msa0366510:CDS
GCTCTGAGTGGATAGAAGAA+AGG 0.519240 3_1:-61398387 Msa0366510:CDS
TTGGAGAGGCCAAAAGGCTA+GGG 0.519737 3_1:-61393501 Msa0366510:CDS
CTCTGAGTGGATAGAAGAAA+GGG 0.520937 3_1:-61398386 Msa0366510:CDS
TTTCCTAAATCCACCAAACA+AGG 0.523989 3_1:+61392763 None:intergenic
TACATTGGAAGCCATATCAT+AGG 0.524278 3_1:+61393628 None:intergenic
CATCTTCACAAAATTGTGAA+TGG 0.527167 3_1:+61392408 None:intergenic
ACCAAATGGAAGGTAAGTAA+AGG 0.529962 3_1:+61392486 None:intergenic
TAGCTGAACTTATAGGATCA+AGG 0.533992 3_1:-61398204 Msa0366510:intron
GCAGGCACAGGTTGGTGAAG+GGG 0.535710 3_1:-61393787 Msa0366510:intron
TCTCTTCCAATCAATTTCCC+TGG 0.538523 3_1:-61393533 Msa0366510:CDS
CCAAATGGAAGGTAAGTAAA+GGG 0.546848 3_1:+61392487 None:intergenic
ATCTATGTCAAACAATACAT+TGG 0.547338 3_1:+61393613 None:intergenic
CTCTCCAAAATGAGGTGCCA+GGG 0.550512 3_1:+61393516 None:intergenic
GAAATGAAGAAAGGCTAACA+TGG 0.551454 3_1:-61392850 Msa0366510:CDS
TGCAGGCACAGGTTGGTGAA+GGG 0.555179 3_1:-61393788 Msa0366510:intron
AAAAGCACAAAGGCAAGACA+AGG 0.560965 3_1:-61398410 Msa0366510:CDS
GAAGTTATCTAGTGATCAAG+AGG 0.566790 3_1:-61393261 Msa0366510:CDS
TAGGTATATTGGGCATCAAG+TGG 0.569167 3_1:-61392592 Msa0366510:CDS
AGTACACATAATACAATGAA+AGG 0.569550 3_1:+61398544 None:intergenic
AAAGGCTAGGGCAAGAATTG+TGG 0.578484 3_1:-61393489 Msa0366510:CDS
AAAGGGAAGGAAATGAAGAA+AGG 0.580570 3_1:-61392859 Msa0366510:intron
ATAAAACAATTGAAGTTGTG+AGG 0.580685 3_1:-61393667 Msa0366510:CDS
CTAACTTGTAGACCTAAGGA+AGG 0.588301 3_1:+61392328 None:intergenic
CCTAAGGAAGGATATGGCAT+AGG 0.589890 3_1:+61392340 None:intergenic
GCAGGGCTTCATAATTGCAT+AGG 0.597715 3_1:-61392463 Msa0366510:CDS
GAAGCCCTGCACCAAATGGA+AGG 0.601532 3_1:+61392476 None:intergenic
TTCCTATTATGAACAAACGA+AGG 0.603400 3_1:-61393457 Msa0366510:CDS
TATTATGAACAAACGAAGGG+AGG 0.608516 3_1:-61393453 Msa0366510:CDS
TAAATCCACCAAACAAGGGA+GGG 0.610091 3_1:+61392768 None:intergenic
CATAGGAAATGAGTTTGCCA+GGG 0.611766 3_1:-61392446 Msa0366510:CDS
TCCTATTATGAACAAACGAA+GGG 0.614526 3_1:-61393456 Msa0366510:CDS
CTTAAAGATACTAGCTACCA+AGG 0.614804 3_1:-61392737 Msa0366510:CDS
ATGTTCCAAAAGGGTCTTTG+GGG 0.618224 3_1:-61398465 Msa0366510:CDS
AAATGAAGAAAGGCTAACAT+GGG 0.624787 3_1:-61392849 Msa0366510:CDS
GTAATTATGTCATCAGCTAG+AGG 0.627210 3_1:+61393353 None:intergenic
CACTGTAGGAGAACCCAGCA+AGG 0.634395 3_1:+61398333 None:intergenic
TGTCCAATAATAAACACTGT+AGG 0.637044 3_1:+61398319 None:intergenic
GTGTTTATTATTGGACAACA+AGG 0.637606 3_1:-61398313 Msa0366510:CDS
ATGGAAGGTAAGTAAAGGGT+GGG 0.637679 3_1:+61392491 None:intergenic
AGCAGACAAAACATCATCTG+AGG 0.643135 3_1:+61398270 None:intergenic
GGTAGTTAATGTCTCAACCC+TGG 0.644929 3_1:+61392429 None:intergenic
AATGGAAGGTAAGTAAAGGG+TGG 0.648522 3_1:+61392490 None:intergenic
TACAAAAGATGAAATACACA+TGG 0.649342 3_1:-61392820 Msa0366510:CDS
TTCCTAAATCCACCAAACAA+GGG 0.651412 3_1:+61392764 None:intergenic
CTAAATCCACCAAACAAGGG+AGG 0.656656 3_1:+61392767 None:intergenic
TTGACATAGATGATCACACA+AGG 0.668771 3_1:-61393601 Msa0366510:CDS
ATGGTCTCAATTGAATCCAG+AGG 0.672228 3_1:-61392380 Msa0366510:CDS
GGCAAGACAAGGGCTCTGAG+TGG 0.676487 3_1:-61398399 Msa0366510:CDS
AAAGCACAAAGGCAAGACAA+GGG 0.695850 3_1:-61398409 Msa0366510:CDS
GAGTTGCTCAAGAATTGATG+AGG 0.701801 3_1:-61392796 Msa0366510:CDS
AATGAAGAAAGGCTAACATG+GGG 0.726923 3_1:-61392848 Msa0366510:CDS
TGTAGGAGAACCCAGCAAGG+AGG 0.735918 3_1:+61398336 None:intergenic
TGACATAGATGATCACACAA+GGG 0.752127 3_1:-61393600 Msa0366510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAACATTATTTATGTTT+TGG + chr3_1:61393298-61393317 None:intergenic 10.0%
!! GTAAAAAAATATAAAAGAAT+AGG - chr3_1:61393899-61393918 Msa0366510:intron 10.0%
!! TTAATTATTATGTAGATATT+TGG - chr3_1:61394215-61394234 Msa0366510:intron 10.0%
!! AAAAAACTAATAAAAATCAT+TGG + chr3_1:61394367-61394386 None:intergenic 10.0%
!!! AAAAAACAAACTTTTTTTTA+AGG - chr3_1:61395373-61395392 Msa0366510:intron 10.0%
!! CATCTATATATATATATATA+TGG - chr3_1:61395453-61395472 Msa0366510:intron 10.0%
!! AATAATCTTTATTATAATCA+AGG - chr3_1:61396772-61396791 Msa0366510:intron 10.0%
!! ATAATACAAAATTAAAACTA+TGG + chr3_1:61398182-61398201 None:intergenic 10.0%
!!! TTAATTTTTTAAAAGCACAA+AGG - chr3_1:61392436-61392455 Msa0366510:CDS 15.0%
!! AAAATTTCAAATAGTTTAGA+TGG - chr3_1:61392724-61392743 Msa0366510:CDS 15.0%
!!! AAAGTGAAATGATATTTTTA+AGG - chr3_1:61392754-61392773 Msa0366510:CDS 15.0%
!!! AAGTGAAATGATATTTTTAA+GGG - chr3_1:61392755-61392774 Msa0366510:CDS 15.0%
!! TAAACATTAAAAATTTCGAA+CGG + chr3_1:61392918-61392937 None:intergenic 15.0%
!!! ATGTATAAGTATTTAATTTG+TGG + chr3_1:61393365-61393384 None:intergenic 15.0%
!!! ACATTTTTAAAGATTTTTGA+AGG + chr3_1:61393412-61393431 None:intergenic 15.0%
!! AATGTGTAAATGTTAAAAAT+AGG + chr3_1:61393471-61393490 None:intergenic 15.0%
!! AATAACAATTTAGATGTTTA+AGG - chr3_1:61393590-61393609 Msa0366510:CDS 15.0%
!!! AAAAAAAGTTTTTGTTTGAT+GGG + chr3_1:61393825-61393844 None:intergenic 15.0%
!!! AAAAAAAAGTTTTTGTTTGA+TGG + chr3_1:61393826-61393845 None:intergenic 15.0%
!!! AATTTTGGCTTATTAAAAAA+TGG + chr3_1:61394109-61394128 None:intergenic 15.0%
!! TTAATTATGATGTAGATATT+TGG - chr3_1:61394286-61394305 Msa0366510:intron 15.0%
!! AACTAATAAAAATCATGTAA+CGG + chr3_1:61394363-61394382 None:intergenic 15.0%
!!! TAATTTTAATAGTGCTAATA+CGG + chr3_1:61394961-61394980 None:intergenic 15.0%
!!! AGAAATAAAAAATGTTTTGA+GGG + chr3_1:61395035-61395054 None:intergenic 15.0%
!!! TAGAAATAAAAAATGTTTTG+AGG + chr3_1:61395036-61395055 None:intergenic 15.0%
!!! GTTAATTATTTCATTTTGTT+AGG + chr3_1:61395352-61395371 None:intergenic 15.0%
!! AAAAAAAATCTAGATAATTG+TGG - chr3_1:61395665-61395684 Msa0366510:intron 15.0%
!!! TTGAGACTTATTTTATAATT+TGG + chr3_1:61395970-61395989 None:intergenic 15.0%
!! TATTATACTATGCAAAATTT+AGG + chr3_1:61396878-61396897 None:intergenic 15.0%
!! GAAGAAGTTATATTTATAAA+AGG - chr3_1:61397006-61397025 Msa0366510:intron 15.0%
!! TTATATTTATAAAAGGATGA+TGG - chr3_1:61397013-61397032 Msa0366510:intron 15.0%
!! TTAAATAATCATTTGCAAAA+AGG + chr3_1:61397791-61397810 None:intergenic 15.0%
!!! TTTTTGTGAGAATTTTTTTG+AGG + chr3_1:61392359-61392378 None:intergenic 20.0%
!! AAACAAAAAATGTTCCAAAA+GGG - chr3_1:61392382-61392401 Msa0366510:CDS 20.0%
!!! AGTGAAATGATATTTTTAAG+GGG - chr3_1:61392756-61392775 Msa0366510:CDS 20.0%
!!! TTATTTTAAGATGTGAAACT+TGG - chr3_1:61393061-61393080 Msa0366510:intron 20.0%
!! TAGATTTGCATGTTAAAAAT+AGG + chr3_1:61393558-61393577 None:intergenic 20.0%
!!! TTTAAGGCAATTTAAATATG+TGG - chr3_1:61393606-61393625 Msa0366510:CDS 20.0%
!! TAGTAGATGATTAATGAATA+TGG - chr3_1:61393640-61393659 Msa0366510:CDS 20.0%
!! AGATGCTAAAACTTATTAAT+AGG - chr3_1:61393664-61393683 Msa0366510:CDS 20.0%
!! GATGCTAAAACTTATTAATA+GGG - chr3_1:61393665-61393684 Msa0366510:CDS 20.0%
!!! ACACCTTTAAAAAAACTTAT+GGG + chr3_1:61394036-61394055 None:intergenic 20.0%
!!! AACACCTTTAAAAAAACTTA+TGG + chr3_1:61394037-61394056 None:intergenic 20.0%
!!! TAAGTTTTTTTAAAGGTGTT+TGG - chr3_1:61394037-61394056 Msa0366510:intron 20.0%
!!! AAGTTTTTTTAAAGGTGTTT+GGG - chr3_1:61394038-61394057 Msa0366510:intron 20.0%
!! ATTATTATGTAGATATTTGG+CGG - chr3_1:61394218-61394237 Msa0366510:intron 20.0%
!! ACTAATAAAAATCATGTAAC+GGG + chr3_1:61394362-61394381 None:intergenic 20.0%
!! AAATTTCATTAACAAAAGTC+TGG - chr3_1:61394405-61394424 Msa0366510:intron 20.0%
!!! GAAATAAAAAATGTTTTGAG+GGG + chr3_1:61395034-61395053 None:intergenic 20.0%
!! AATTATTATTGAGGAAAATG+AGG + chr3_1:61395105-61395124 None:intergenic 20.0%
!! GTTGAAAAGAATTATTATTG+AGG + chr3_1:61395114-61395133 None:intergenic 20.0%
!! AAATACTCTGTAAAGAAATA+TGG + chr3_1:61395511-61395530 None:intergenic 20.0%
!! TAAGACAAAATTAACATTAG+AGG + chr3_1:61395541-61395560 None:intergenic 20.0%
!! TTGTCTTATATGAATATTGA+TGG - chr3_1:61395553-61395572 Msa0366510:intron 20.0%
!!! TGAATATTGATGGTTTTTTA+AGG - chr3_1:61395563-61395582 Msa0366510:intron 20.0%
!!! AAAAGTACTTACATAAATTG+AGG + chr3_1:61395770-61395789 None:intergenic 20.0%
!! TTCAATAAGCTATTTATGTT+TGG + chr3_1:61395805-61395824 None:intergenic 20.0%
!!! TTATACTTTTGGATTTATCT+TGG + chr3_1:61396011-61396030 None:intergenic 20.0%
!!! TTTTGACTGTTAGATATATT+TGG + chr3_1:61396043-61396062 None:intergenic 20.0%
!!! TGAGTCTTATTTTATGTTTT+TGG + chr3_1:61396071-61396090 None:intergenic 20.0%
!! TTCATATTAGAGTTAGTTAA+GGG + chr3_1:61396477-61396496 None:intergenic 20.0%
!! ATTCATATTAGAGTTAGTTA+AGG + chr3_1:61396478-61396497 None:intergenic 20.0%
!! AAAAATTGTGTTATAGTGAA+TGG - chr3_1:61396648-61396667 Msa0366510:intron 20.0%
!!! TTTTTTTCACATAGTTTTGA+AGG + chr3_1:61397124-61397143 None:intergenic 20.0%
!! TCAAAACTATGTGAAAAAAA+TGG - chr3_1:61397124-61397143 Msa0366510:intron 20.0%
!!! GTTTACAAAAAAGTTTTAGA+AGG - chr3_1:61397617-61397636 Msa0366510:intron 20.0%
!!! AAATGGAAATTTTAAAGCAA+AGG - chr3_1:61397979-61397998 Msa0366510:intron 20.0%
!!! AATGGAAATTTTAAAGCAAA+GGG - chr3_1:61397980-61397999 Msa0366510:intron 20.0%
!!! ATCAGTGACATATATATTTT+TGG - chr3_1:61398210-61398229 Msa0366510:CDS 20.0%
!!! TCAGTGACATATATATTTTT+GGG - chr3_1:61398211-61398230 Msa0366510:CDS 20.0%
!! GGTTAACATTAATGTTAATA+TGG - chr3_1:61398232-61398251 Msa0366510:CDS 20.0%
!! TAAGAAGATATATTACATCT+TGG + chr3_1:61398561-61398580 None:intergenic 20.0%
! AGTACACATAATACAATGAA+AGG + chr3_1:61392315-61392334 None:intergenic 25.0%
! CAAACAAAAAATGTTCCAAA+AGG - chr3_1:61392381-61392400 Msa0366510:CDS 25.0%
!!! TTTTTAAGGGGATACTTAAA+TGG - chr3_1:61392768-61392787 Msa0366510:CDS 25.0%
!!! TTTTGAGTATTTTGTAGACT+TGG - chr3_1:61393002-61393021 Msa0366510:intron 25.0%
! AAAATCGCAATCACAATTAA+TGG - chr3_1:61393266-61393285 Msa0366510:CDS 25.0%
! CTAAAACTTATTAATAGGGA+TGG - chr3_1:61393669-61393688 Msa0366510:CDS 25.0%
!!! ACTCCCATAAGTTTTTTTAA+AGG - chr3_1:61394030-61394049 Msa0366510:intron 25.0%
!! CTAGGTTAAGCTAAAAATTT+TGG + chr3_1:61394124-61394143 None:intergenic 25.0%
! ATTATGATGTAGATATTTGG+CGG - chr3_1:61394289-61394308 Msa0366510:intron 25.0%
! CTAATAAAAATCATGTAACG+GGG + chr3_1:61394361-61394380 None:intergenic 25.0%
! AACTATGTTGGATCTATTAT+TGG + chr3_1:61394603-61394622 None:intergenic 25.0%
! AATAATAGATCCAACATAGT+TGG - chr3_1:61394602-61394621 Msa0366510:intron 25.0%
! ATAATAGATCCAACATAGTT+GGG - chr3_1:61394603-61394622 Msa0366510:intron 25.0%
!!! GTTTTTTCTGAATCTTATAG+CGG + chr3_1:61394679-61394698 None:intergenic 25.0%
! GGAAATTATAGTTAATGTGT+TGG + chr3_1:61395084-61395103 None:intergenic 25.0%
! AACAATTTCACATCTCTTTA+TGG + chr3_1:61395228-61395247 None:intergenic 25.0%
! ATATAAGCTGTTTATCCAAA+CGG - chr3_1:61395881-61395900 Msa0366510:intron 25.0%
!!! GGAGACTTATTTTATACTTT+TGG + chr3_1:61396022-61396041 None:intergenic 25.0%
! TCTCAACAGTTTAATAAGTA+GGG + chr3_1:61396321-61396340 None:intergenic 25.0%
! TTCTCAACAGTTTAATAAGT+AGG + chr3_1:61396322-61396341 None:intergenic 25.0%
! GAAGAAATACAAAAGTGAAA+AGG - chr3_1:61396402-61396421 Msa0366510:intron 25.0%
! TTGAATCAAGATCATAATCA+AGG + chr3_1:61396939-61396958 None:intergenic 25.0%
! GAAATAAGGACTTTCATATT+TGG - chr3_1:61396972-61396991 Msa0366510:intron 25.0%
! AACTATGTGAAAAAAATGGA+TGG - chr3_1:61397128-61397147 Msa0366510:intron 25.0%
! ATAAAACAATTGAAGTTGTG+AGG - chr3_1:61397189-61397208 Msa0366510:intron 25.0%
! ATCTATGTCAAACAATACAT+TGG + chr3_1:61397246-61397265 None:intergenic 25.0%
! TTCCATATTCCAAACTAAAA+AGG - chr3_1:61397681-61397700 Msa0366510:intron 25.0%
! TCCATATTCCAAACTAAAAA+GGG - chr3_1:61397682-61397701 Msa0366510:intron 25.0%
!! AAACTTTAAAGAGAGACTAA+GGG + chr3_1:61397936-61397955 None:intergenic 25.0%
!! AAAACTTTAAAGAGAGACTA+AGG + chr3_1:61397937-61397956 None:intergenic 25.0%
! ATTCCTTTATGTAGAACAAA+TGG - chr3_1:61397962-61397981 Msa0366510:intron 25.0%
! TTTCCATTTGTTCTACATAA+AGG + chr3_1:61397968-61397987 None:intergenic 25.0%
! TACAAAAGATGAAATACACA+TGG - chr3_1:61398036-61398055 Msa0366510:intron 25.0%
!! GTTAATATGGTTTCTTGTTT+AGG - chr3_1:61398245-61398264 Msa0366510:CDS 25.0%
!! GTTTCTTGTTTAGGTATATT+GGG - chr3_1:61398254-61398273 Msa0366510:CDS 25.0%
TTAAGTGTCTCTCCAATAAT+AGG + chr3_1:61392420-61392439 None:intergenic 30.0%
TCTCCTACAGTGTTTATTAT+TGG - chr3_1:61392534-61392553 Msa0366510:CDS 30.0%
TGTCCAATAATAAACACTGT+AGG + chr3_1:61392540-61392559 None:intergenic 30.0%
GTGTTTATTATTGGACAACA+AGG - chr3_1:61392543-61392562 Msa0366510:CDS 30.0%
CAAGGAAACAAGTTTATTCT+TGG - chr3_1:61392561-61392580 Msa0366510:CDS 30.0%
! AAGTATCTTTTGAATGGTAG+GGG + chr3_1:61392619-61392638 None:intergenic 30.0%
! CAAGTATCTTTTGAATGGTA+GGG + chr3_1:61392620-61392639 None:intergenic 30.0%
! CTTTCCAAGTATCTTTTGAA+TGG + chr3_1:61392625-61392644 None:intergenic 30.0%
TAAGATTTCAGAATGCTGAT+CGG + chr3_1:61392829-61392848 None:intergenic 30.0%
ATTCTACTTAGGATTCAGAT+CGG + chr3_1:61392878-61392897 None:intergenic 30.0%
! CATAGTTTAGGATTCTACTT+AGG + chr3_1:61392889-61392908 None:intergenic 30.0%
!! GAACGGATTTTACATAGTTT+AGG + chr3_1:61392901-61392920 None:intergenic 30.0%
AGCTTATGTACTTTATAGCA+AGG - chr3_1:61393121-61393140 Msa0366510:intron 30.0%
CGAATTCAACATCATAACTA+AGG - chr3_1:61393964-61393983 Msa0366510:intron 30.0%
TCAAAATAAGCCAATCCAAA+CGG + chr3_1:61393992-61394011 None:intergenic 30.0%
CTCTTCAATCCATATACAAT+CGG - chr3_1:61394470-61394489 Msa0366510:intron 30.0%
TCTTCAATCCATATACAATC+GGG - chr3_1:61394471-61394490 Msa0366510:intron 30.0%
TTCATAATCCCGATTGTATA+TGG + chr3_1:61394482-61394501 None:intergenic 30.0%
ATTGTTGTGAGAGATTATGA+AGG + chr3_1:61394804-61394823 None:intergenic 30.0%
TAGCTTATAGCAACCATTAT+CGG - chr3_1:61394872-61394891 Msa0366510:intron 30.0%
ACATCAGATATAGGTAAGTT+TGG - chr3_1:61394909-61394928 Msa0366510:intron 30.0%
! TAATTCTTTTCAACCACTCT+TGG - chr3_1:61395120-61395139 Msa0366510:intron 30.0%
! ATCTCTTTATGGATTGTCAT+TGG + chr3_1:61395217-61395236 None:intergenic 30.0%
!!! ATCCATTGTGTGTTTTTTGT+GGG + chr3_1:61395262-61395281 None:intergenic 30.0%
! CTTACATAAATTGAGGTGTT+TGG + chr3_1:61395763-61395782 None:intergenic 30.0%
TATAAGCTGTTTATCCAAAC+GGG - chr3_1:61395882-61395901 Msa0366510:intron 30.0%
!!! TTTGCCTTATTTTGCCAATT+AGG + chr3_1:61395909-61395928 None:intergenic 30.0%
CTCAACAGTTTAATAAGTAG+GGG + chr3_1:61396320-61396339 None:intergenic 30.0%
TAATAACGATCAATACTGTG+TGG + chr3_1:61396542-61396561 None:intergenic 30.0%
GTATGTTTGAACTCAAATAG+TGG - chr3_1:61396578-61396597 Msa0366510:intron 30.0%
TGTACAGTTGAATATTTGAG+TGG - chr3_1:61396614-61396633 Msa0366510:intron 30.0%
CGGTTAAATATGCTCAATAA+AGG + chr3_1:61396688-61396707 None:intergenic 30.0%
ATATTCCACATCAACTTAGA+TGG + chr3_1:61396730-61396749 None:intergenic 30.0%
TATGATCTTGATTCAAACAG+TGG - chr3_1:61396943-61396962 Msa0366510:intron 30.0%
!! TTGAGGCTTGTGTTTATTTT+TGG - chr3_1:61397045-61397064 Msa0366510:intron 30.0%
TTCCTATTATGAACAAACGA+AGG - chr3_1:61397399-61397418 Msa0366510:intron 30.0%
TCCTATTATGAACAAACGAA+GGG - chr3_1:61397400-61397419 Msa0366510:intron 30.0%
TTTCTTGTCTTCTTGCAATA+AGG - chr3_1:61397465-61397484 Msa0366510:intron 30.0%
TTCTTGTCTTCTTGCAATAA+GGG - chr3_1:61397466-61397485 Msa0366510:intron 30.0%
!!! AAACAAAGCCCTTTTTAGTT+TGG + chr3_1:61397693-61397712 None:intergenic 30.0%
!!! GAAATTTTAAAGCAAAGGGA+AGG - chr3_1:61397984-61398003 Msa0366510:intron 30.0%
AAATGAAGAAAGGCTAACAT+GGG - chr3_1:61398007-61398026 Msa0366510:intron 30.0%
AAGGATATGACATCCAAAAA+GGG - chr3_1:61398138-61398157 Msa0366510:intron 30.0%
! GGTTTCTTGTTTAGGTATAT+TGG - chr3_1:61398253-61398272 Msa0366510:CDS 30.0%
!! GTTTGATTTTCAAAACGAGA+TGG + chr3_1:61398336-61398355 None:intergenic 30.0%
CATCTTCACAAAATTGTGAA+TGG + chr3_1:61398451-61398470 None:intergenic 30.0%
! ATTTTGTGAAGATGTGTGAA+TGG - chr3_1:61398457-61398476 Msa0366510:CDS 30.0%
AAATGTTCCAAAAGGGTCTT+TGG - chr3_1:61392389-61392408 Msa0366510:CDS 35.0%
AATGTTCCAAAAGGGTCTTT+GGG - chr3_1:61392390-61392409 Msa0366510:CDS 35.0%
!! TCTTTGGGGTATCCTATTAT+TGG - chr3_1:61392405-61392424 Msa0366510:CDS 35.0%
!! GAAGAAAGGGTATCAAAGTA+TGG - chr3_1:61392483-61392502 Msa0366510:CDS 35.0%
! AGTATCTTTTGAATGGTAGG+GGG + chr3_1:61392618-61392637 None:intergenic 35.0%
! CCAAGTATCTTTTGAATGGT+AGG + chr3_1:61392621-61392640 None:intergenic 35.0%
CCTACCATTCAAAAGATACT+TGG - chr3_1:61392618-61392637 Msa0366510:intron 35.0%
CAAACTCTAGCTGAACTTAT+AGG - chr3_1:61392645-61392664 Msa0366510:intron 35.0%
TAGCTGAACTTATAGGATCA+AGG - chr3_1:61392652-61392671 Msa0366510:intron 35.0%
AAGATTTCAGAATGCTGATC+GGG + chr3_1:61392828-61392847 None:intergenic 35.0%
! ATTTTGCTCCGCCTTATAAT+TGG - chr3_1:61392942-61392961 Msa0366510:intron 35.0%
! CAAAATCGAGATTTTGCTTC+AGG - chr3_1:61393148-61393167 Msa0366510:intron 35.0%
TATTAATAGGGATGGCAAAG+CGG - chr3_1:61393677-61393696 Msa0366510:CDS 35.0%
CTCGATCACAAAATTTGACT+CGG + chr3_1:61393748-61393767 None:intergenic 35.0%
!! AAAGTTTTTGTTTGATGGGC+CGG + chr3_1:61393821-61393840 None:intergenic 35.0%
AAAATAAGCCAATCCAAACG+GGG + chr3_1:61393990-61394009 None:intergenic 35.0%
CAAAATAAGCCAATCCAAAC+GGG + chr3_1:61393991-61394010 None:intergenic 35.0%
!!! TGGCTTATTTTGAGCTTATG+TGG - chr3_1:61393999-61394018 Msa0366510:intron 35.0%
!!! GGCTTATTTTGAGCTTATGT+GGG - chr3_1:61394000-61394019 Msa0366510:intron 35.0%
TAGCTTAACCTAGCTTAACA+CGG - chr3_1:61394131-61394150 Msa0366510:intron 35.0%
TAAATCAAAAGCCAAGACTG+CGG - chr3_1:61394431-61394450 Msa0366510:intron 35.0%
! CTTTTCATTACCAGATTCAG+AGG + chr3_1:61394751-61394770 None:intergenic 35.0%
!! GAGAGATTATGAAGGTATTG+TGG + chr3_1:61394796-61394815 None:intergenic 35.0%
AGCTTATAGCAACCATTATC+GGG - chr3_1:61394873-61394892 Msa0366510:intron 35.0%
TACCTATATCTGATGTTCAC+TGG + chr3_1:61394905-61394924 None:intergenic 35.0%
GCACCAAATTTCATAACACA+AGG - chr3_1:61395058-61395077 Msa0366510:intron 35.0%
!! TGGCCTTGTGTTATGAAATT+TGG + chr3_1:61395064-61395083 None:intergenic 35.0%
TGTTCAATTCACATGCTTCT+AGG + chr3_1:61395157-61395176 None:intergenic 35.0%
GTCATTGGTCAAAGCATATA+TGG + chr3_1:61395202-61395221 None:intergenic 35.0%
!!! GATCCATTGTGTGTTTTTTG+TGG + chr3_1:61395263-61395282 None:intergenic 35.0%
ATAAGCTGTTTATCCAAACG+GGG - chr3_1:61395883-61395902 Msa0366510:intron 35.0%
TCTCGTCTCGTTAAAATACA+GGG + chr3_1:61396190-61396209 None:intergenic 35.0%
TTGAACTCGCTTTCTATAGT+TGG + chr3_1:61396227-61396246 None:intergenic 35.0%
AACAGTTTAATAAGTAGGGG+TGG + chr3_1:61396317-61396336 None:intergenic 35.0%
AAACATGACATCCATGAAAG+TGG - chr3_1:61396340-61396359 Msa0366510:intron 35.0%
TGATGTTTGCAGCTACAATT+GGG + chr3_1:61396820-61396839 None:intergenic 35.0%
TTGATGTTTGCAGCTACAAT+TGG + chr3_1:61396821-61396840 None:intergenic 35.0%
!!! CTTGTGTTTATTTTTGGTGC+AGG - chr3_1:61397051-61397070 Msa0366510:intron 35.0%
!!! ACATAGTTTTGAAGGCATTC+AGG + chr3_1:61397116-61397135 None:intergenic 35.0%
TACATTGGAAGCCATATCAT+AGG + chr3_1:61397231-61397250 None:intergenic 35.0%
TTGACATAGATGATCACACA+AGG - chr3_1:61397255-61397274 Msa0366510:intron 35.0%
TGACATAGATGATCACACAA+GGG - chr3_1:61397256-61397275 Msa0366510:intron 35.0%
TCCCTTCGTTTGTTCATAAT+AGG + chr3_1:61397404-61397423 None:intergenic 35.0%
TATTATGAACAAACGAAGGG+AGG - chr3_1:61397403-61397422 Msa0366510:intron 35.0%
GTAATTATGTCATCAGCTAG+AGG + chr3_1:61397506-61397525 None:intergenic 35.0%
! CTCTTATGAGCTTGATGATA+TGG - chr3_1:61397573-61397592 Msa0366510:intron 35.0%
GAAGTTATCTAGTGATCAAG+AGG - chr3_1:61397595-61397614 Msa0366510:intron 35.0%
!!! GCCCTTTTTAGTTTGGAATA+TGG + chr3_1:61397686-61397705 None:intergenic 35.0%
AAAGGGAAGGAAATGAAGAA+AGG - chr3_1:61397997-61398016 Msa0366510:intron 35.0%
GAAATGAAGAAAGGCTAACA+TGG - chr3_1:61398006-61398025 Msa0366510:intron 35.0%
AATGAAGAAAGGCTAACATG+GGG - chr3_1:61398008-61398027 Msa0366510:intron 35.0%
TTCCTAAATCCACCAAACAA+GGG + chr3_1:61398095-61398114 None:intergenic 35.0%
TTTCCTAAATCCACCAAACA+AGG + chr3_1:61398096-61398115 None:intergenic 35.0%
CTTAAAGATACTAGCTACCA+AGG - chr3_1:61398119-61398138 Msa0366510:intron 35.0%
! CTTTTTGGATGTCATATCCT+TGG + chr3_1:61398139-61398158 None:intergenic 35.0%
CAAGGATATGACATCCAAAA+AGG - chr3_1:61398137-61398156 Msa0366510:intron 35.0%
CCAAATGGAAGGTAAGTAAA+GGG + chr3_1:61398372-61398391 None:intergenic 35.0%
ACCAAATGGAAGGTAAGTAA+AGG + chr3_1:61398373-61398392 None:intergenic 35.0%
! AATCCTAACTTGTAGACCTA+AGG + chr3_1:61398535-61398554 None:intergenic 35.0%
ATGTTCCAAAAGGGTCTTTG+GGG - chr3_1:61392391-61392410 Msa0366510:CDS 40.0%
! AAAAGCACAAAGGCAAGACA+AGG - chr3_1:61392446-61392465 Msa0366510:CDS 40.0%
AAAGCACAAAGGCAAGACAA+GGG - chr3_1:61392447-61392466 Msa0366510:CDS 40.0%
CTCTGAGTGGATAGAAGAAA+GGG - chr3_1:61392470-61392489 Msa0366510:CDS 40.0%
!!! AGCAAGGAGGTTTTGAAAAC+AGG + chr3_1:61392510-61392529 None:intergenic 40.0%
! TGTTTTCAAAACCTCCTTGC+TGG - chr3_1:61392509-61392528 Msa0366510:CDS 40.0%
! GTTTTCAAAACCTCCTTGCT+GGG - chr3_1:61392510-61392529 Msa0366510:CDS 40.0%
AGCAGACAAAACATCATCTG+AGG + chr3_1:61392589-61392608 None:intergenic 40.0%
ACTTAGGATTCAGATCGGTA+AGG + chr3_1:61392873-61392892 None:intergenic 40.0%
! AGATTTTGCTTCAGGTCGAA+AGG - chr3_1:61393156-61393175 Msa0366510:intron 40.0%
! GATTTTGCTTCAGGTCGAAA+GGG - chr3_1:61393157-61393176 Msa0366510:intron 40.0%
ATTAATAGGGATGGCAAAGC+GGG - chr3_1:61393678-61393697 Msa0366510:CDS 40.0%
!!! TCGTTTTTAGTGGGCTTAGA+CGG + chr3_1:61393714-61393733 None:intergenic 40.0%
!! TCACAAAATTTGACTCGGCT+CGG + chr3_1:61393743-61393762 None:intergenic 40.0%
TATAAGCTCCGTGTTAAGCT+AGG + chr3_1:61394142-61394161 None:intergenic 40.0%
ATTCTTGCATGTTAGACGTG+AGG + chr3_1:61394541-61394560 None:intergenic 40.0%
CAACAACATCCCAACTATGT+TGG + chr3_1:61394615-61394634 None:intergenic 40.0%
GGAATCAGATGCTTCTAATG+TGG + chr3_1:61394658-61394677 None:intergenic 40.0%
! TAGCAGAAGCTTTAGCTATG+CGG + chr3_1:61394728-61394747 None:intergenic 40.0%
AAGCTAAATGTTGATGCAGC+AGG + chr3_1:61394858-61394877 None:intergenic 40.0%
TTATAGCAACCATTATCGGG+AGG - chr3_1:61394876-61394895 Msa0366510:intron 40.0%
GTCCAGTGAACATCAGATAT+AGG - chr3_1:61394900-61394919 Msa0366510:intron 40.0%
TTGTTGGAGACGTTAAATGG+AGG + chr3_1:61394936-61394955 None:intergenic 40.0%
! GTGTTGTTGGAGACGTTAAA+TGG + chr3_1:61394939-61394958 None:intergenic 40.0%
!! TAGTGCTAATACGGTGTTGT+TGG + chr3_1:61394952-61394971 None:intergenic 40.0%
TCTTTGTGCCTTATGTACAG+TGG - chr3_1:61394989-61395008 Msa0366510:intron 40.0%
TGTGACTACCACTGTACATA+AGG + chr3_1:61395000-61395019 None:intergenic 40.0%
! TCTTTTCAACCACTCTTGGA+AGG - chr3_1:61395124-61395143 Msa0366510:intron 40.0%
! CTTTTCAACCACTCTTGGAA+GGG - chr3_1:61395125-61395144 Msa0366510:intron 40.0%
TGAATTGAACATCACACCCA+AGG - chr3_1:61395166-61395185 Msa0366510:intron 40.0%
!! ATATGGTTTGCTTCCTCCTT+GGG + chr3_1:61395185-61395204 None:intergenic 40.0%
!! TATATGGTTTGCTTCCTCCT+TGG + chr3_1:61395186-61395205 None:intergenic 40.0%
TGCCCACAAAAAACACACAA+TGG - chr3_1:61395257-61395276 Msa0366510:intron 40.0%
GTCTCGTCTCGTTAAAATAC+AGG + chr3_1:61396191-61396210 None:intergenic 40.0%
GTTCAAAACTTCGACTCAAC+CGG - chr3_1:61396241-61396260 Msa0366510:intron 40.0%
AATAAGTAGGGGTGGCAAAA+CGG + chr3_1:61396309-61396328 None:intergenic 40.0%
!! GCTTTTTCTCTCCACTTTCA+TGG + chr3_1:61396354-61396373 None:intergenic 40.0%
GTTAGCACAATTCAAACTCG+CGG + chr3_1:61396708-61396727 None:intergenic 40.0%
!! GCTAACCATCTAAGTTGATG+TGG - chr3_1:61396722-61396741 Msa0366510:intron 40.0%
AACACAAGCCTCAAACTAGA+TGG + chr3_1:61397039-61397058 None:intergenic 40.0%
!!! TTTATTTTTGGTGCAGGCAC+AGG - chr3_1:61397057-61397076 Msa0366510:intron 40.0%
GAAGAAGCTGTCCTATGATA+TGG - chr3_1:61397217-61397236 Msa0366510:intron 40.0%
CACAAGGGAAATACTGTTTG+AGG - chr3_1:61397271-61397290 Msa0366510:intron 40.0%
TCTCTTCCAATCAATTTCCC+TGG - chr3_1:61397323-61397342 Msa0366510:intron 40.0%
GAGTTGCTCAAGAATTGATG+AGG - chr3_1:61398060-61398079 Msa0366510:intron 40.0%
TAAATCCACCAAACAAGGGA+GGG + chr3_1:61398091-61398110 None:intergenic 40.0%
GATATGACATCCAAAAAGGG+TGG - chr3_1:61398141-61398160 Msa0366510:intron 40.0%
TAGGTATATTGGGCATCAAG+TGG - chr3_1:61398264-61398283 Msa0366510:CDS 40.0%
CGAGATGGTTCAAACTTGTA+TGG + chr3_1:61398321-61398340 None:intergenic 40.0%
ATGGAAGGTAAGTAAAGGGT+GGG + chr3_1:61398368-61398387 None:intergenic 40.0%
AATGGAAGGTAAGTAAAGGG+TGG + chr3_1:61398369-61398388 None:intergenic 40.0%
CCCTTTACTTACCTTCCATT+TGG - chr3_1:61398369-61398388 Msa0366510:CDS 40.0%
CATAGGAAATGAGTTTGCCA+GGG - chr3_1:61398410-61398429 Msa0366510:CDS 40.0%
ATGGTCTCAATTGAATCCAG+AGG - chr3_1:61398476-61398495 Msa0366510:CDS 40.0%
TGACGAGTAATAGTTTCCTC+TGG + chr3_1:61398495-61398514 None:intergenic 40.0%
TGTAGACCTAAGGAAGGATA+TGG + chr3_1:61398525-61398544 None:intergenic 40.0%
! CTAACTTGTAGACCTAAGGA+AGG + chr3_1:61398531-61398550 None:intergenic 40.0%
CTTCCTTAGGTCTACAAGTT+AGG - chr3_1:61398529-61398548 Msa0366510:CDS 40.0%
! GCTCTGAGTGGATAGAAGAA+AGG - chr3_1:61392469-61392488 Msa0366510:CDS 45.0%
TCACGAACGCGCCAATTATA+AGG + chr3_1:61392956-61392975 None:intergenic 45.0%
!!! GTTTTTAGTGGGCTTAGACG+GGG + chr3_1:61393712-61393731 None:intergenic 45.0%
!!! CGTTTTTAGTGGGCTTAGAC+GGG + chr3_1:61393713-61393732 None:intergenic 45.0%
ATCATAACTAAGGCCCCGTT+TGG - chr3_1:61393974-61393993 Msa0366510:intron 45.0%
TAGATATTTGGCGGTGCATG+AGG - chr3_1:61394298-61394317 Msa0366510:intron 45.0%
AAGACTGCGGAAATACAAGG+CGG - chr3_1:61394444-61394463 Msa0366510:intron 45.0%
GAGCTAGATAATGAGCAGCT+TGG - chr3_1:61394511-61394530 Msa0366510:intron 45.0%
TTTAGCTATGCGGAAGGGTT+TGG + chr3_1:61394718-61394737 None:intergenic 45.0%
! GAAGCTTTAGCTATGCGGAA+GGG + chr3_1:61394723-61394742 None:intergenic 45.0%
! AGAAGCTTTAGCTATGCGGA+AGG + chr3_1:61394724-61394743 None:intergenic 45.0%
TCCAATAGAGGGAGGTAAGT+GGG + chr3_1:61394835-61394854 None:intergenic 45.0%
ATTGAACATCACACCCAAGG+AGG - chr3_1:61395169-61395188 Msa0366510:intron 45.0%
TTATCCAAACGGGGCCTAAT+TGG - chr3_1:61395892-61395911 Msa0366510:intron 45.0%
GGGGCCTAATTGGCAAAATA+AGG - chr3_1:61395902-61395921 Msa0366510:intron 45.0%
TTAACTCATTGGAGGACACG+GGG + chr3_1:61396138-61396157 None:intergenic 45.0%
CTTAACTCATTGGAGGACAC+GGG + chr3_1:61396139-61396158 None:intergenic 45.0%
GCTTAACTCATTGGAGGACA+CGG + chr3_1:61396140-61396159 None:intergenic 45.0%
GTGTCCTCCAATGAGTTAAG+CGG - chr3_1:61396139-61396158 Msa0366510:intron 45.0%
TGTCCTCCAATGAGTTAAGC+GGG - chr3_1:61396140-61396159 Msa0366510:intron 45.0%
GTCTCGTTAAAATACAGGGC+GGG + chr3_1:61396186-61396205 None:intergenic 45.0%
CGTCTCGTTAAAATACAGGG+CGG + chr3_1:61396187-61396206 None:intergenic 45.0%
!! TTTCTATAGTTGGCTCGGCT+CGG + chr3_1:61396217-61396236 None:intergenic 45.0%
CTCGCTTTCTATAGTTGGCT+CGG + chr3_1:61396222-61396241 None:intergenic 45.0%
!!! TTTGGCTCGCTATTTTTGGC+CGG + chr3_1:61396263-61396282 None:intergenic 45.0%
GCCAAAAATAGCGAGCCAAA+CGG - chr3_1:61396263-61396282 Msa0366510:intron 45.0%
CCAAAAATAGCGAGCCAAAC+GGG - chr3_1:61396264-61396283 Msa0366510:intron 45.0%
ATAAGTAGGGGTGGCAAAAC+GGG + chr3_1:61396308-61396327 None:intergenic 45.0%
AACAGTGGCGCTGTGAAATA+AGG - chr3_1:61396958-61396977 Msa0366510:intron 45.0%
! GATGATGGCCATCTAGTTTG+AGG - chr3_1:61397028-61397047 Msa0366510:intron 45.0%
! ATTTCCCTGGCACCTCATTT+TGG - chr3_1:61397336-61397355 Msa0366510:intron 45.0%
! CTTTTGGCCTCTCCAAAATG+AGG + chr3_1:61397351-61397370 None:intergenic 45.0%
!! CTCATTTTGGAGAGGCCAAA+AGG - chr3_1:61397349-61397368 Msa0366510:intron 45.0%
!! CAATTCTTGCCCTAGCCTTT+TGG + chr3_1:61397367-61397386 None:intergenic 45.0%
AAAGGCTAGGGCAAGAATTG+TGG - chr3_1:61397367-61397386 Msa0366510:intron 45.0%
CGAAGGGAGGATTTGTCAAA+AGG - chr3_1:61397416-61397435 Msa0366510:intron 45.0%
CTAAATCCACCAAACAAGGG+AGG + chr3_1:61398092-61398111 None:intergenic 45.0%
!! CTCCCTTGTTTGGTGGATTT+AGG - chr3_1:61398090-61398109 Msa0366510:intron 45.0%
! ATATCACCTGCCACCCTTTT+TGG + chr3_1:61398154-61398173 None:intergenic 45.0%
AGGTAAGTAAAGGGTGGGAT+TGG + chr3_1:61398363-61398382 None:intergenic 45.0%
!! ACTTACCTTCCATTTGGTGC+AGG - chr3_1:61398375-61398394 Msa0366510:CDS 45.0%
!! CTTACCTTCCATTTGGTGCA+GGG - chr3_1:61398376-61398395 Msa0366510:CDS 45.0%
TTATGAAGCCCTGCACCAAA+TGG + chr3_1:61398387-61398406 None:intergenic 45.0%
GCAGGGCTTCATAATTGCAT+AGG - chr3_1:61398393-61398412 Msa0366510:CDS 45.0%
GCATAGGAAATGAGTTTGCC+AGG - chr3_1:61398409-61398428 Msa0366510:CDS 45.0%
GGTAGTTAATGTCTCAACCC+TGG + chr3_1:61398430-61398449 None:intergenic 45.0%
CCTAAGGAAGGATATGGCAT+AGG + chr3_1:61398519-61398538 None:intergenic 45.0%
CCTATGCCATATCCTTCCTT+AGG - chr3_1:61398516-61398535 Msa0366510:CDS 45.0%
!! AAAAAATTAAAATATTTGTT+TGG + chr3_1:61394250-61394269 None:intergenic 5.0%
!!! AAATATTTTAATTTTTTTGA+AGG - chr3_1:61394253-61394272 Msa0366510:intron 5.0%
! GGATACCCCAAAGACCCTTT+TGG + chr3_1:61392399-61392418 None:intergenic 50.0%
CGAACGCGCCAATTATAAGG+CGG + chr3_1:61392953-61392972 None:intergenic 50.0%
AACTAAGGCCCCGTTTGGAT+TGG - chr3_1:61393979-61393998 Msa0366510:intron 50.0%
GCCAAGACTGCGGAAATACA+AGG - chr3_1:61394441-61394460 Msa0366510:intron 50.0%
GCCTTGTATTTCCGCAGTCT+TGG + chr3_1:61394445-61394464 None:intergenic 50.0%
AGACTGCGGAAATACAAGGC+GGG - chr3_1:61394445-61394464 Msa0366510:intron 50.0%
GCTTCTGCTACCTCTGAATC+TGG - chr3_1:61394738-61394757 Msa0366510:intron 50.0%
CCAATAGAGGGAGGTAAGTG+GGG + chr3_1:61394834-61394853 None:intergenic 50.0%
GTCCAATAGAGGGAGGTAAG+TGG + chr3_1:61394836-61394855 None:intergenic 50.0%
GATGCAGCAGGTCCAATAGA+GGG + chr3_1:61394846-61394865 None:intergenic 50.0%
TGATGCAGCAGGTCCAATAG+AGG + chr3_1:61394847-61394866 None:intergenic 50.0%
TTTGCCAATTAGGCCCCGTT+TGG + chr3_1:61395899-61395918 None:intergenic 50.0%
TTAAAATACAGGGCGGGCAC+GGG + chr3_1:61396180-61396199 None:intergenic 50.0%
GTTAAAATACAGGGCGGGCA+CGG + chr3_1:61396181-61396200 None:intergenic 50.0%
!! CCCGTTTGGCTCGCTATTTT+TGG + chr3_1:61396267-61396286 None:intergenic 50.0%
AAATAGCGAGCCAAACGGGT+TGG - chr3_1:61396268-61396287 Msa0366510:intron 50.0%
! AATAGCGAGCCAAACGGGTT+GGG - chr3_1:61396269-61396288 Msa0366510:intron 50.0%
!! TTTTTGGTGCAGGCACAGGT+TGG - chr3_1:61397061-61397080 Msa0366510:intron 50.0%
! GAGGTGCCAGGGAAATTGAT+TGG + chr3_1:61397332-61397351 None:intergenic 50.0%
! CTCTCCAAAATGAGGTGCCA+GGG + chr3_1:61397343-61397362 None:intergenic 50.0%
TTTGGAGAGGCCAAAAGGCT+AGG - chr3_1:61397354-61397373 Msa0366510:intron 50.0%
TTGGAGAGGCCAAAAGGCTA+GGG - chr3_1:61397355-61397374 Msa0366510:intron 50.0%
AGGATGATCCCTCCCTTGTT+TGG - chr3_1:61398080-61398099 Msa0366510:intron 50.0%
! ATGATCCCTCCCTTGTTTGG+TGG - chr3_1:61398083-61398102 Msa0366510:intron 50.0%
TGACATCCAAAAAGGGTGGC+AGG - chr3_1:61398145-61398164 Msa0366510:intron 50.0%
!! AGTAAAGGGTGGGATTGGCT+TGG + chr3_1:61398358-61398377 None:intergenic 50.0%
TGTAGGAGAACCCAGCAAGG+AGG + chr3_1:61392523-61392542 None:intergenic 55.0%
CACTGTAGGAGAACCCAGCA+AGG + chr3_1:61392526-61392545 None:intergenic 55.0%
GCGCGTTCGTGATGTGATGT+AGG - chr3_1:61392964-61392983 Msa0366510:intron 55.0%
!! TTTAGTGGGCTTAGACGGGG+CGG + chr3_1:61393709-61393728 None:intergenic 55.0%
!!! CGGCGCGTCTCGTTTTTAGT+GGG + chr3_1:61393723-61393742 None:intergenic 55.0%
!! TCGGCGCGTCTCGTTTTTAG+TGG + chr3_1:61393724-61393743 None:intergenic 55.0%
! AACGGGACGGGGTGAGATTT+TGG + chr3_1:61393772-61393791 None:intergenic 55.0%
ATCCCAAGCCCGCCACTAAA+CGG + chr3_1:61393790-61393809 None:intergenic 55.0%
!! TTAGTGGCGGGCTTGGGATT+TGG - chr3_1:61393791-61393810 Msa0366510:intron 55.0%
GACTGCGGAAATACAAGGCG+GGG - chr3_1:61394446-61394465 Msa0366510:intron 55.0%
GAGGGAGGTAAGTGGGGTAT+TGG + chr3_1:61394828-61394847 None:intergenic 55.0%
CCCCACTTACCTCCCTCTAT+TGG - chr3_1:61394831-61394850 Msa0366510:intron 55.0%
CACTGGACACCTCCCGATAA+TGG + chr3_1:61394888-61394907 None:intergenic 55.0%
GGTACATGCCCTTCCAAGAG+TGG + chr3_1:61395136-61395155 None:intergenic 55.0%
CAGCCCGCTTAACTCATTGG+AGG + chr3_1:61396146-61396165 None:intergenic 55.0%
CTCCAATGAGTTAAGCGGGC+TGG - chr3_1:61396144-61396163 Msa0366510:intron 55.0%
TAAAATACAGGGCGGGCACG+GGG + chr3_1:61396179-61396198 None:intergenic 55.0%
!! TGCAGGCACAGGTTGGTGAA+GGG - chr3_1:61397068-61397087 Msa0366510:intron 55.0%
! CCTCTCCAAAATGAGGTGCC+AGG + chr3_1:61397344-61397363 None:intergenic 55.0%
!! CCTGGCACCTCATTTTGGAG+AGG - chr3_1:61397341-61397360 Msa0366510:intron 55.0%
GAAGCCCTGCACCAAATGGA+AGG + chr3_1:61398383-61398402 None:intergenic 55.0%
!! GGCAAGACAAGGGCTCTGAG+TGG - chr3_1:61392457-61392476 Msa0366510:CDS 60.0%
!! TTAGTGGGCTTAGACGGGGC+GGG + chr3_1:61393708-61393727 None:intergenic 60.0%
TCTCACCCCGTCCCGTTTAG+TGG - chr3_1:61393775-61393794 Msa0366510:CDS 60.0%
AAGCCCGCCACTAAACGGGA+CGG + chr3_1:61393785-61393804 None:intergenic 60.0%
!! TCCCGTTTAGTGGCGGGCTT+GGG - chr3_1:61393785-61393804 Msa0366510:CDS 60.0%
TCCCAAGCCCGCCACTAAAC+GGG + chr3_1:61393789-61393808 None:intergenic 60.0%
GCAGCAGGTCCAATAGAGGG+AGG + chr3_1:61394843-61394862 None:intergenic 60.0%
GGCCAGCCCGCTTAACTCAT+TGG + chr3_1:61396149-61396168 None:intergenic 60.0%
!! GTGCAGGCACAGGTTGGTGA+AGG - chr3_1:61397067-61397086 Msa0366510:intron 60.0%
!! GCAGGCACAGGTTGGTGAAG+GGG - chr3_1:61397069-61397088 Msa0366510:intron 60.0%
!! CAGGCACAGGTTGGTGAAGG+GGG - chr3_1:61397070-61397089 Msa0366510:intron 60.0%
CACCCCGTCCCGTTTAGTGG+CGG - chr3_1:61393778-61393797 Msa0366510:CDS 65.0%
ACCCCGTCCCGTTTAGTGGC+GGG - chr3_1:61393779-61393798 Msa0366510:CDS 65.0%
AGCCCGCCACTAAACGGGAC+GGG + chr3_1:61393784-61393803 None:intergenic 65.0%
!! GTCCCGTTTAGTGGCGGGCT+TGG - chr3_1:61393784-61393803 Msa0366510:CDS 65.0%
!! GTGGCGGGCTTGGGATTTGG+CGG - chr3_1:61393794-61393813 Msa0366510:intron 65.0%
!! TGGCGGGCTTGGGATTTGGC+GGG - chr3_1:61393795-61393814 Msa0366510:intron 65.0%
TCATTGGAGGACACGGGGCG+TGG + chr3_1:61396133-61396152 None:intergenic 65.0%
TGGGCTTAGACGGGGCGGGT+CGG + chr3_1:61393704-61393723 None:intergenic 70.0%
GCCCGCCACTAAACGGGACG+GGG + chr3_1:61393783-61393802 None:intergenic 70.0%
! GGGCTTGGGATTTGGCGGGC+CGG - chr3_1:61393799-61393818 Msa0366510:intron 70.0%
TGGAGGACACGGGGCGTGGT+GGG + chr3_1:61396129-61396148 None:intergenic 70.0%
TTGGAGGACACGGGGCGTGG+TGG + chr3_1:61396130-61396149 None:intergenic 70.0%
ATACAGGGCGGGCACGGGGT+GGG + chr3_1:61396175-61396194 None:intergenic 70.0%
AATACAGGGCGGGCACGGGG+TGG + chr3_1:61396176-61396195 None:intergenic 70.0%
GGAGGACACGGGGCGTGGTG+GGG + chr3_1:61396128-61396147 None:intergenic 75.0%
TACAGGGCGGGCACGGGGTG+GGG + chr3_1:61396174-61396193 None:intergenic 75.0%
!! GGACACGGGGCGTGGTGGGG+CGG + chr3_1:61396125-61396144 None:intergenic 80.0%
! AGGGCGGGCACGGGGTGGGG+CGG + chr3_1:61396171-61396190 None:intergenic 85.0%
! GGGCGGGCACGGGGTGGGGC+GGG + chr3_1:61396170-61396189 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 61392297 61398581 61392297 ID=Msa0366510;Name=Msa0366510
chr3_1 mRNA 61392297 61398581 61392297 ID=Msa0366510-mRNA-1;Parent=Msa0366510;Name=Msa0366510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.33|0|1|0.66|0.5|4|0|472
chr3_1 exon 61398205 61398581 61398205 ID=Msa0366510-mRNA-1:exon:11910;Parent=Msa0366510-mRNA-1
chr3_1 exon 61393240 61393805 61393240 ID=Msa0366510-mRNA-1:exon:11909;Parent=Msa0366510-mRNA-1
chr3_1 exon 61392712 61392872 61392712 ID=Msa0366510-mRNA-1:exon:11908;Parent=Msa0366510-mRNA-1
chr3_1 exon 61392297 61392611 61392297 ID=Msa0366510-mRNA-1:exon:11907;Parent=Msa0366510-mRNA-1
chr3_1 CDS 61398205 61398581 61398205 ID=Msa0366510-mRNA-1:cds;Parent=Msa0366510-mRNA-1
chr3_1 CDS 61393240 61393805 61393240 ID=Msa0366510-mRNA-1:cds;Parent=Msa0366510-mRNA-1
chr3_1 CDS 61392712 61392872 61392712 ID=Msa0366510-mRNA-1:cds;Parent=Msa0366510-mRNA-1
chr3_1 CDS 61392297 61392611 61392297 ID=Msa0366510-mRNA-1:cds;Parent=Msa0366510-mRNA-1
Gene Sequence

>Msa0366510

ATGGTTGATGATATACCTTTCATTGTATTATGTGTACTCACTTTGAGTTTAATTTTTCTCCTCAAAAAAATTCTCACAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCTTTGGGGTATCCTATTATTGGAGAGACACTTAATTTTTTAAAAGCACAAAGGCAAGACAAGGGCTCTGAGTGGATAGAAGAAAGGGTATCAAAGTATGGTCCTGTTTTCAAAACCTCCTTGCTGGGTTCTCCTACAGTGTTTATTATTGGACAACAAGGAAACAAGTTTATTCTTGGTTCCTCAGATGATGTTTTGTCTGCTAACAAACCCCCTACCATTCAAAAGATACTTGGAAAGCAAACTCTAGCTGAACTTATAGGATCAAGGCACAGGTTGGTGAAGGGGGAAATGTTGAAATTCTTGAAACCTGAATGCCTTCAAAACTATGTGAAAAAAATGGATGGCTTAGTGAACACAGTATTACTCAAAGAATTGAAAGAGAATAAAACAATTGAAGTTGTGAGGTTGATGAAGAAGCTGTCCTATGATATGGCTTCCAATGTATTGTTTGACATAGATGATCACACAAGGGAAATACTGTTTGAGGATTTTATCACAGCATTTAAAGCAATTCACTCTCTTCCAATCAATTTCCCTGGCACCTCATTTTGGAGAGGCCAAAAGGCTAGGGCAAGAATTGTGGCAAAGATACTTCCTATTATGAACAAACGAAGGGAGGATTTGTCAAAAGGAGTTCTAAGCTCTACTAATGATATGCTTTCTTGTCTTCTTGCAATAAGGGATGAAAATCATCAACCTCTAGCTGATGACATAATTACAGACAATTTTATTTTTCTATTTGTTGCAAGTCATGACACATCTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAGTGATCAAGAGGTTTACAAAAAAGTTTTAGAAGGAAATGAAGAAAGGCTAACATGGGGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCTCCCTTGTTTGGTGGATTTAGGAAAGCACTTAAAGATACTAGCTACCAAGGATATGACATCCAAAAAGGGTGGCAGGTATATTGGGCATCAAGTGGAACACATGAGAACAAAGATATATTTGAGAATCCATACAAGTTTGAACCATCTCGTTTTGAAAATCAAACCAAGCCAATCCCACCCTTTACTTACCTTCCATTTGGTGCAGGGCTTCATAATTGCATAGGAAATGAGTTTGCCAGGGTTGAGACATTAACTACCATTCACAATTTTGTGAAGATGTGTGAATGGTCTCAATTGAATCCAGAGGAAACTATTACTCGTCAACCTATGCCATATCCTTCCTTAGGTCTACAAGTTAGGATTAAACCAAGATGTAATATATCTTCTTAA
Protein sequence

>Msa0366510

MVDDIPFIVLCVLTLSLIFLLKKILTKSQTKNVPKGSLGYPIIGETLNFLKAQRQDKGSEWIEERVSKYGPVFKTSLLGSPTVFIIGQQGNKFILGSSDDVLSANKPPTIQKILGKQTLAELIGSRHRLVKGEMLKFLKPECLQNYVKKMDGLVNTVLLKELKENKTIEVVRLMKKLSYDMASNVLFDIDDHTREILFEDFITAFKAIHSLPINFPGTSFWRGQKARARIVAKILPIMNKRREDLSKGVLSSTNDMLSCLLAIRDENHQPLADDIITDNFIFLFVASHDTSATLMSLMIWKLSSDQEVYKKVLEGNEERLTWGEIQKMKYTWRVAQELMRMIPPLFGGFRKALKDTSYQGYDIQKGWQVYWASSGTHENKDIFENPYKFEPSRFENQTKPIPPFTYLPFGAGLHNCIGNEFARVETLTTIHNFVKMCEWSQLNPEETITRQPMPYPSLGLQVRIKPRCNISS*