Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492070 | XP_003598693.2 | 97.212 | 789 | 22 | 0 | 1 | 789 | 45 | 833 | 0.0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492070 | sp|Q10FT0|PUB24_ORYSJ | 28.078 | 666 | 410 | 20 | 187 | 789 | 160 | 819 | 7.20e-44 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492070 | A0A396INB7 | 97.212 | 789 | 22 | 0 | 1 | 789 | 45 | 833 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0397020 | Msa0492070 | 0.825256 | 5.176053e-54 | -8.615850e-47 |
| Msa0444290 | Msa0492070 | 0.865330 | 6.387370e-65 | -8.615850e-47 |
| Msa0350000 | Msa0492070 | 0.888602 | 5.102586e-73 | -8.615850e-47 |
| Msa0492070 | Msa0650290 | 0.801323 | 9.507521e-49 | -8.615850e-47 |
| Msa0492070 | Msa0692200 | 0.807596 | 4.680177e-50 | -8.615850e-47 |
| Msa0492070 | Msa0976290 | 0.813061 | 3.096413e-51 | -8.615850e-47 |
| Msa0492070 | Msa1033780 | 0.810408 | 1.170225e-50 | -8.615850e-47 |
| Msa0492070 | Msa1409720 | 0.816637 | 4.991811e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492070 | MtrunA17_Chr3g0084371 | 97.212 | 789 | 22 | 0 | 1 | 789 | 45 | 833 | 0.0 | 1541 |
| Msa0492070 | MtrunA17_Chr8g0346441 | 34.187 | 664 | 421 | 7 | 140 | 789 | 345 | 1006 | 8.66e-104 | 342 |
| Msa0492070 | MtrunA17_Chr7g0275961 | 32.177 | 634 | 415 | 6 | 169 | 789 | 370 | 1001 | 6.25e-91 | 307 |
| Msa0492070 | MtrunA17_Chr3g0144071 | 27.702 | 657 | 419 | 18 | 178 | 789 | 165 | 810 | 1.68e-47 | 181 |
| Msa0492070 | MtrunA17_Chr1g0188041 | 27.592 | 627 | 401 | 18 | 187 | 780 | 392 | 998 | 3.57e-46 | 178 |
| Msa0492070 | MtrunA17_Chr3g0106931 | 31.613 | 155 | 102 | 1 | 253 | 407 | 593 | 743 | 1.31e-11 | 68.6 |
| Msa0492070 | MtrunA17_Chr1g0205751 | 28.191 | 188 | 127 | 6 | 194 | 376 | 220 | 404 | 2.30e-11 | 67.4 |
| Msa0492070 | MtrunA17_Chr7g0261371 | 27.957 | 186 | 131 | 2 | 202 | 385 | 502 | 686 | 4.47e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0492070 | AT1G76390.1 | 28.331 | 653 | 418 | 18 | 180 | 789 | 162 | 807 | 2.09e-44 | 172 |
| Msa0492070 | AT1G76390.2 | 28.331 | 653 | 418 | 18 | 180 | 789 | 162 | 807 | 2.09e-44 | 172 |
| Msa0492070 | AT1G20780.1 | 27.656 | 687 | 458 | 19 | 140 | 789 | 113 | 797 | 1.09e-43 | 170 |
| Msa0492070 | AT1G20780.2 | 27.656 | 687 | 458 | 19 | 140 | 789 | 113 | 797 | 1.09e-43 | 170 |
| Msa0492070 | AT1G20780.3 | 27.656 | 687 | 458 | 19 | 140 | 789 | 113 | 797 | 1.09e-43 | 170 |
| Msa0492070 | AT1G68940.1 | 24.719 | 712 | 461 | 23 | 140 | 789 | 387 | 1085 | 1.66e-35 | 145 |
| Msa0492070 | AT1G68940.2 | 25.535 | 654 | 426 | 21 | 140 | 740 | 387 | 1032 | 7.51e-35 | 143 |
| Msa0492070 | AT1G68940.3 | 25.535 | 654 | 426 | 21 | 140 | 740 | 334 | 979 | 7.76e-35 | 143 |
| Msa0492070 | AT2G23140.1 | 32.258 | 155 | 101 | 1 | 253 | 407 | 586 | 736 | 1.74e-11 | 68.6 |
| Msa0492070 | AT2G23140.2 | 32.258 | 155 | 101 | 1 | 253 | 407 | 583 | 733 | 1.78e-11 | 68.6 |
| Msa0492070 | AT2G23140.4 | 32.258 | 155 | 101 | 1 | 253 | 407 | 583 | 733 | 1.78e-11 | 68.6 |
| Msa0492070 | AT3G01400.1 | 27.917 | 240 | 133 | 6 | 179 | 403 | 52 | 266 | 2.68e-11 | 66.6 |
| Msa0492070 | AT2G23140.3 | 32.258 | 155 | 101 | 1 | 253 | 407 | 394 | 544 | 2.89e-11 | 67.4 |
| Msa0492070 | AT2G23140.5 | 32.258 | 155 | 101 | 1 | 253 | 407 | 394 | 544 | 2.89e-11 | 67.4 |
Find 132 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCCTCAATTTGCTTAAT+AGG | 0.114490 | 3_4:+15108474 | None:intergenic |
| ACATGATGCAGCAAAGTTAT+TGG | 0.194177 | 3_4:-15107442 | Msa0492070:CDS |
| AATAGATGACCTTGAATTAT+AGG | 0.201280 | 3_4:+15106320 | None:intergenic |
| CAAGATGAAATTTGGGAAAA+TGG | 0.205181 | 3_4:-15105522 | Msa0492070:CDS |
| ACTTCTTAGCAATTGAATTA+TGG | 0.217153 | 3_4:+15108059 | None:intergenic |
| AATTTCATTGCGAAATTATC+AGG | 0.234488 | 3_4:-15105495 | Msa0492070:CDS |
| TTGCTAAGAAGTATTGCTTT+TGG | 0.266379 | 3_4:-15108048 | Msa0492070:CDS |
| TAATGGCAACAGCACTTTCT+AGG | 0.266610 | 3_4:-15106673 | Msa0492070:CDS |
| TTCACGACTTATCGAAATAT+TGG | 0.269396 | 3_4:-15105601 | Msa0492070:CDS |
| CATTCATTTATGTGCATGTT+TGG | 0.270562 | 3_4:-15105184 | Msa0492070:three_prime_UTR |
| CTCTATGAGAATGAATATTA+TGG | 0.277262 | 3_4:-15105229 | Msa0492070:three_prime_UTR |
| CTTGTCAAAATGTTCATTAC+TGG | 0.300519 | 3_4:-15106593 | Msa0492070:CDS |
| TCAAGTGGTTCTTATTGATT+TGG | 0.300541 | 3_4:-15105352 | Msa0492070:CDS |
| GTTAATGAGAAGCGGAAAAT+TGG | 0.300762 | 3_4:-15108163 | Msa0492070:CDS |
| ACAGTGAACGGTCATAATTT+TGG | 0.303038 | 3_4:-15105137 | Msa0492070:three_prime_UTR |
| CTCAAAATTCACTCTCTCTT+AGG | 0.310714 | 3_4:-15105740 | Msa0492070:CDS |
| ATAGATGACCTTGAATTATA+GGG | 0.320252 | 3_4:+15106321 | None:intergenic |
| GATGTTGGAGAAAATATTTA+AGG | 0.323077 | 3_4:-15105409 | Msa0492070:CDS |
| TCGATTAAGCTATTTGTTGA+TGG | 0.326299 | 3_4:+15105921 | None:intergenic |
| GAAGAACATAGAGTGAAATA+TGG | 0.348558 | 3_4:-15105384 | Msa0492070:CDS |
| ATCAAGGGCTGCAAACTCTT+TGG | 0.353733 | 3_4:-15105772 | Msa0492070:CDS |
| TGGCTGAGGCTGGTTACTTT+AGG | 0.356935 | 3_4:-15107383 | Msa0492070:CDS |
| TGCGCTTAGAGATGATAAAT+TGG | 0.358247 | 3_4:+15106559 | None:intergenic |
| GTTTGGATTGACGGTTAGTT+TGG | 0.358969 | 3_4:-15105167 | Msa0492070:three_prime_UTR |
| ATGACTTTCATCAAGATATT+CGG | 0.361296 | 3_4:+15106121 | None:intergenic |
| TTGATTCGATCAGGAATTAC+AGG | 0.367426 | 3_4:-15106497 | Msa0492070:CDS |
| TGTCCTCAATTTGCTTAATA+GGG | 0.368485 | 3_4:+15108475 | None:intergenic |
| CAACAGGGTCATCACCATTA+AGG | 0.375156 | 3_4:+15107469 | None:intergenic |
| CAAGTATATTATTATAAATA+TGG | 0.393637 | 3_4:+15104908 | None:intergenic |
| GCTGCATCATGTGAAGCAAC+AGG | 0.395579 | 3_4:+15107453 | None:intergenic |
| ATGTTGGTCGCCATCCTTAA+TGG | 0.395954 | 3_4:-15107483 | Msa0492070:CDS |
| TCACTCAATTCATTCAAGAT+TGG | 0.396017 | 3_4:+15108603 | None:intergenic |
| GAAAATCAATAGACACTTCA+AGG | 0.397793 | 3_4:+15108406 | None:intergenic |
| CAAGAAACTACAACTTGTTT+CGG | 0.404230 | 3_4:-15105856 | Msa0492070:CDS |
| TAGAAAGTGCTGTTGCCATT+AGG | 0.405420 | 3_4:+15106675 | None:intergenic |
| CTTTCAAGCCCTATAATTCA+AGG | 0.411340 | 3_4:-15106329 | Msa0492070:CDS |
| TAATCAAAATGCACTTCATA+TGG | 0.415025 | 3_4:-15107403 | Msa0492070:CDS |
| TATGTAATAATTTATTAGAA+AGG | 0.417184 | 3_4:-15104958 | Msa0492070:three_prime_UTR |
| GTTCAACGTTTGATTCGATC+AGG | 0.422266 | 3_4:-15106506 | Msa0492070:CDS |
| CCGATCCGCCTTCGAACTGC+TGG | 0.426866 | 3_4:+15107528 | None:intergenic |
| CAAGCGTCTAGTTTCATGTA+AGG | 0.427669 | 3_4:-15108097 | Msa0492070:CDS |
| TATGTGCATGTTTGGATTGA+CGG | 0.431821 | 3_4:-15105176 | Msa0492070:three_prime_UTR |
| CATGATATCGGCCGGTCGTT+GGG | 0.435693 | 3_4:-15108447 | Msa0492070:CDS |
| AATAGCATGTCTTCTCATCT+TGG | 0.449387 | 3_4:-15106287 | Msa0492070:CDS |
| AATTATTACATACACTAGAA+TGG | 0.449720 | 3_4:+15104969 | None:intergenic |
| AGGAAAATAACATCAAAATC+AGG | 0.456937 | 3_4:-15106199 | Msa0492070:CDS |
| TAATAATTTATTAGAAAGGA+AGG | 0.458514 | 3_4:-15104954 | Msa0492070:three_prime_UTR |
| TAACATCAAAATCAGGTGTA+AGG | 0.461132 | 3_4:-15106192 | Msa0492070:CDS |
| AAGTAACCGATATACTCAAA+AGG | 0.462832 | 3_4:-15106001 | Msa0492070:CDS |
| TCACAATACGCATTCGTTGA+AGG | 0.463387 | 3_4:+15105684 | None:intergenic |
| AACATCTTCGTTGACGAGAA+TGG | 0.469925 | 3_4:+15106379 | None:intergenic |
| AACTTGTTTCGGTACAACTC+GGG | 0.472664 | 3_4:-15105845 | Msa0492070:CDS |
| CAACTTGTTTCGGTACAACT+CGG | 0.478145 | 3_4:-15105846 | Msa0492070:CDS |
| TCAAGGGTGTATTGTTATGT+TGG | 0.478969 | 3_4:-15107499 | Msa0492070:CDS |
| CTCAATTCATTCAAGATTGG+TGG | 0.479413 | 3_4:+15108606 | None:intergenic |
| TGGATTGACGGTTAGTTTGG+CGG | 0.481683 | 3_4:-15105164 | Msa0492070:three_prime_UTR |
| GTTCACCAATCACAAAATCA+AGG | 0.482327 | 3_4:-15105788 | Msa0492070:CDS |
| GAGGACATGACACATGATAT+CGG | 0.482853 | 3_4:-15108459 | Msa0492070:CDS |
| AGGCGGATCGGAAGAATTCA+AGG | 0.486451 | 3_4:-15107516 | Msa0492070:CDS |
| TTGTCAAAATGTTCATTACT+GGG | 0.493626 | 3_4:-15106592 | Msa0492070:CDS |
| ATGATGAATGCAAGATTTGA+CGG | 0.497379 | 3_4:-15108354 | Msa0492070:CDS |
| ATATTCATTCTCATAGAGAA+AGG | 0.497816 | 3_4:+15105234 | None:intergenic |
| CAGTGGTGAAGTCTCTTACA+AGG | 0.501321 | 3_4:-15107605 | Msa0492070:CDS |
| AGTTTCACTTATGAAACTAA+AGG | 0.504403 | 3_4:-15108187 | Msa0492070:CDS |
| CAAGCAAAACTCCCAACGAC+CGG | 0.505505 | 3_4:+15108436 | None:intergenic |
| GGCAACAGCACTTTCTAGGT+TGG | 0.505877 | 3_4:-15106669 | Msa0492070:CDS |
| TGACATGAACAAGATCCTAA+TGG | 0.507798 | 3_4:-15106690 | Msa0492070:CDS |
| ATGAGTGAAACGAGGACGGT+TGG | 0.508455 | 3_4:-15108291 | Msa0492070:CDS |
| TGGTACAATGCAGGAGAAGA+TGG | 0.508804 | 3_4:-15107649 | Msa0492070:intron |
| GAGTGATAACAGTGTTGTAT+TGG | 0.510112 | 3_4:-15108586 | Msa0492070:CDS |
| AGTGAAAAGGCGGCTGCGGT+TGG | 0.510804 | 3_4:-15106056 | Msa0492070:CDS |
| CATCTGTGCTCATGACACTA+AGG | 0.512161 | 3_4:-15106445 | Msa0492070:CDS |
| ACAAAATAGATATCAAAAGC+TGG | 0.514590 | 3_4:+15105967 | None:intergenic |
| ACATGATATCGGCCGGTCGT+TGG | 0.517377 | 3_4:-15108448 | Msa0492070:CDS |
| CAACATGGAAAACTCAGAAA+AGG | 0.525821 | 3_4:+15108641 | None:intergenic |
| GCCCTCAATTCGAAAATCGT+TGG | 0.525824 | 3_4:-15108559 | Msa0492070:CDS |
| GCCACTAGTTCAGTATTTGA+AGG | 0.526366 | 3_4:-15107361 | Msa0492070:CDS |
| AAACTTACCCTCGGAGAAGA+TGG | 0.526413 | 3_4:-15106629 | Msa0492070:CDS |
| GCACTTCATATGGCTGAGGC+TGG | 0.530551 | 3_4:-15107393 | Msa0492070:CDS |
| AGTAACCGATATACTCAAAA+GGG | 0.530566 | 3_4:-15106000 | Msa0492070:CDS |
| AGAAGAGAGGAGGGAAGCAG+TGG | 0.533234 | 3_4:-15107577 | Msa0492070:CDS |
| AGAGAGTGAAAAGGCGGCTG+CGG | 0.546328 | 3_4:-15106060 | Msa0492070:CDS |
| CTAGTTCAGTATTTGAAGGA+AGG | 0.546371 | 3_4:-15107357 | Msa0492070:intron |
| AATATTGGAAGATAAAGAGA+AGG | 0.547474 | 3_4:-15105586 | Msa0492070:CDS |
| AGCTTAATCGAGAATGCTAC+CGG | 0.548988 | 3_4:-15105909 | Msa0492070:CDS |
| CGTGCAAGAATAGCTGATGC+AGG | 0.560177 | 3_4:+15106419 | None:intergenic |
| AACTAGACGCTTGAAAAGAA+AGG | 0.562900 | 3_4:+15108107 | None:intergenic |
| AAGATATTCGGTCAACTCAT+CGG | 0.566212 | 3_4:+15106133 | None:intergenic |
| AGTGGTGAAGTCTCTTACAA+GGG | 0.569174 | 3_4:-15107604 | Msa0492070:CDS |
| ATATGGAGAATCTGCTCAAG+TGG | 0.571666 | 3_4:-15105367 | Msa0492070:CDS |
| CTAACGTTCCAGCAGTTCGA+AGG | 0.573214 | 3_4:-15107536 | Msa0492070:CDS |
| TCTAGAAGTTGGTGATGCAA+AGG | 0.574108 | 3_4:-15105451 | Msa0492070:CDS |
| AAGGGATTCAGAAGAGAGGA+GGG | 0.574393 | 3_4:-15107586 | Msa0492070:CDS |
| ATCCACATCAGAGAGTGAAA+AGG | 0.578700 | 3_4:-15106069 | Msa0492070:CDS |
| TGGTAATTTCTCAACCAACA+TGG | 0.579200 | 3_4:+15108626 | None:intergenic |
| TCTTGCACGAATTGCTCAGT+CGG | 0.585121 | 3_4:-15106405 | Msa0492070:CDS |
| TCCTTCAAATACTGAACTAG+TGG | 0.585593 | 3_4:+15107360 | None:intergenic |
| AAATGCACTTCATATGGCTG+AGG | 0.585763 | 3_4:-15107397 | Msa0492070:CDS |
| CCAGCAGTTCGAAGGCGGAT+CGG | 0.587143 | 3_4:-15107528 | Msa0492070:CDS |
| ATCTGTGCTCATGACACTAA+GGG | 0.589179 | 3_4:-15106444 | Msa0492070:CDS |
| ACACCCTATTAAGCAAATTG+AGG | 0.590072 | 3_4:-15108478 | Msa0492070:CDS |
| ACGTTCCAGCAGTTCGAAGG+CGG | 0.594463 | 3_4:-15107533 | Msa0492070:CDS |
| GAAGAGAGGAGGGAAGCAGT+GGG | 0.594508 | 3_4:-15107576 | Msa0492070:CDS |
| CGTGAAGCGGTTTATAACAC+CGG | 0.597145 | 3_4:+15105890 | None:intergenic |
| CAAGGGATTCAGAAGAGAGG+AGG | 0.598706 | 3_4:-15107587 | Msa0492070:CDS |
| TGTCAGATGAATTCGTGAAG+CGG | 0.600084 | 3_4:+15105877 | None:intergenic |
| AATGCAGGAGAAGATGGTTG+AGG | 0.605540 | 3_4:-15107643 | Msa0492070:intron |
| CTAAAGGAGTTAATGAGAAG+CGG | 0.607347 | 3_4:-15108171 | Msa0492070:CDS |
| ACTTGTTTCGGTACAACTCG+GGG | 0.608648 | 3_4:-15105844 | Msa0492070:CDS |
| AAAACAAGATAAATTACAAG+AGG | 0.608659 | 3_4:+15105009 | None:intergenic |
| TTTGGCGGAATCACAGTGAA+CGG | 0.611017 | 3_4:-15105149 | Msa0492070:three_prime_UTR |
| TTCACCAATCACAAAATCAA+GGG | 0.611717 | 3_4:-15105787 | Msa0492070:CDS |
| TTTCATGAGTGAAACGAGGA+CGG | 0.612135 | 3_4:-15108295 | Msa0492070:CDS |
| GCGTATTGTGAAGTTCATGA+TGG | 0.612567 | 3_4:-15105672 | Msa0492070:CDS |
| ACATGAGTTTGATGAAATCA+CGG | 0.621898 | 3_4:+15105073 | None:intergenic |
| CAATCGCTCCATCTTCTCCG+AGG | 0.622338 | 3_4:+15106621 | None:intergenic |
| GAACTGCTGGAACGTTAGAG+AGG | 0.622766 | 3_4:+15107541 | None:intergenic |
| AGGGTCATCACCATTAAGGA+TGG | 0.623420 | 3_4:+15107473 | None:intergenic |
| GATCACAGCAAACTTACCCT+CGG | 0.632173 | 3_4:-15106638 | Msa0492070:CDS |
| AATCGCTCCATCTTCTCCGA+GGG | 0.633086 | 3_4:+15106622 | None:intergenic |
| GACGGTTGGAGAAATAGAAG+AGG | 0.634976 | 3_4:-15108277 | Msa0492070:CDS |
| CTGCATCATGTGAAGCAACA+GGG | 0.635408 | 3_4:+15107454 | None:intergenic |
| ACATGACACATGATATCGGC+CGG | 0.638680 | 3_4:-15108455 | Msa0492070:CDS |
| CACATCAGAGAGTGAAAAGG+CGG | 0.639535 | 3_4:-15106066 | Msa0492070:CDS |
| AAACAAGATAAATTACAAGA+GGG | 0.643366 | 3_4:+15105010 | None:intergenic |
| GGAAATGTAGAAAGTCAAAG+TGG | 0.648664 | 3_4:-15105719 | Msa0492070:CDS |
| TTACAAGGGATTCAGAAGAG+AGG | 0.665641 | 3_4:-15107590 | Msa0492070:CDS |
| GGCGGATCGGAAGAATTCAA+GGG | 0.667758 | 3_4:-15107515 | Msa0492070:CDS |
| ATGAGAAGCGGAAAATTGGA+CGG | 0.671694 | 3_4:-15108159 | Msa0492070:CDS |
| TTGTTTAGTCAAAGCAGGTG+CGG | 0.699281 | 3_4:-15105625 | Msa0492070:CDS |
| GGACGGTGGTTTGATTAACG+AGG | 0.709297 | 3_4:-15108142 | Msa0492070:CDS |
| AGAAGCGGAAAATTGGACGG+TGG | 0.714460 | 3_4:-15108156 | Msa0492070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAGTAAAATATACTTT+TGG | + | chr3_4:15106724-15106743 | None:intergenic | 10.0% |
| !!! | AGTATATTTTACTTAATATT+TGG | - | chr3_4:15106726-15106745 | Msa0492070:intron | 10.0% |
| !! | TATGTAATAATTTATTAGAA+AGG | - | chr3_4:15108606-15108625 | Msa0492070:CDS | 10.0% |
| !! | TTTATAGAAATTTGATCTTA+CGG | + | chr3_4:15106298-15106317 | None:intergenic | 15.0% |
| !! | TCTATAAAATTTCAATTAGA+TGG | - | chr3_4:15106310-15106329 | Msa0492070:CDS | 15.0% |
| !! | AAATTAATAGTATAACATGA+AGG | + | chr3_4:15106481-15106500 | None:intergenic | 15.0% |
| !! | TAATAATTTATTAGAAAGGA+AGG | - | chr3_4:15108610-15108629 | Msa0492070:CDS | 15.0% |
| !!! | TTTACCTTTTGTTATAGATA+TGG | + | chr3_4:15105702-15105721 | None:intergenic | 20.0% |
| !! | CTTTATCTTACTTTATAAAG+TGG | - | chr3_4:15105895-15105914 | Msa0492070:CDS | 20.0% |
| !! | ATAACATGAAGGAAAAAAAA+AGG | + | chr3_4:15106470-15106489 | None:intergenic | 20.0% |
| !! | CTTCATTTGTACAATTAATT+TGG | + | chr3_4:15106640-15106659 | None:intergenic | 20.0% |
| !!! | CACTTATTTTCTATAAGAAT+TGG | - | chr3_4:15106671-15106690 | Msa0492070:CDS | 20.0% |
| !! | ACATTTAATTGAAGTATGAT+CGG | + | chr3_4:15106761-15106780 | None:intergenic | 20.0% |
| !! | ATCATACTTCAATTAAATGT+AGG | - | chr3_4:15106761-15106780 | Msa0492070:intron | 20.0% |
| !! | AGAAGAAAAATGAAAGAAAA+AGG | - | chr3_4:15107313-15107332 | Msa0492070:intron | 20.0% |
| !!! | ATGTTATTTTCCTTAAGAAA+AGG | + | chr3_4:15107358-15107377 | None:intergenic | 20.0% |
| !! | ATTATAAAAAGTCTAGAAGT+TGG | - | chr3_4:15108102-15108121 | Msa0492070:CDS | 20.0% |
| !! | AAACAAGATAAATTACAAGA+GGG | + | chr3_4:15108557-15108576 | None:intergenic | 20.0% |
| !! | AAAACAAGATAAATTACAAG+AGG | + | chr3_4:15108558-15108577 | None:intergenic | 20.0% |
| !! | AATTATTACATACACTAGAA+TGG | + | chr3_4:15108598-15108617 | None:intergenic | 20.0% |
| !!! | ATTGATTTTCGAGAAAAGAT+TGG | - | chr3_4:15105171-15105190 | Msa0492070:three_prime_UTR | 25.0% |
| ! | CTCATGAAAAATTCTGATTT+CGG | + | chr3_4:15105258-15105277 | None:intergenic | 25.0% |
| ! | AGTTTCACTTATGAAACTAA+AGG | - | chr3_4:15105377-15105396 | Msa0492070:CDS | 25.0% |
| ! | ACTTCTTAGCAATTGAATTA+TGG | + | chr3_4:15105508-15105527 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATGATGAGAAAA+AGG | - | chr3_4:15105533-15105552 | Msa0492070:CDS | 25.0% |
| !! | GTAAAAATCAACTCATTTTC+AGG | + | chr3_4:15105565-15105584 | None:intergenic | 25.0% |
| !!! | TACTATGTTTTTGTAGATGT+TGG | - | chr3_4:15105582-15105601 | Msa0492070:CDS | 25.0% |
| !! | TCTAAAATTCTTGCACATTT+AGG | - | chr3_4:15105605-15105624 | Msa0492070:CDS | 25.0% |
| ! | TAAGCCATATCTATAACAAA+AGG | - | chr3_4:15105695-15105714 | Msa0492070:CDS | 25.0% |
| !!! | ATAAATTGTTTTGATAGCTC+AGG | - | chr3_4:15105750-15105769 | Msa0492070:CDS | 25.0% |
| ! | AATAAGCTATAAACAGCTTA+TGG | - | chr3_4:15105774-15105793 | Msa0492070:CDS | 25.0% |
| ! | ACTTATTTAAGCTTATCTAC+TGG | + | chr3_4:15105862-15105881 | None:intergenic | 25.0% |
| ! | TAATCAAAATGCACTTCATA+TGG | - | chr3_4:15106161-15106180 | Msa0492070:CDS | 25.0% |
| ! | TATCTACTAGAGAGTTTAAT+AGG | - | chr3_4:15106400-15106419 | Msa0492070:CDS | 25.0% |
| ! | TTAGAAAAGTGAATATGATG+TGG | - | chr3_4:15106511-15106530 | Msa0492070:CDS | 25.0% |
| ! | CTATTATACCACAGATTTAA+AGG | + | chr3_4:15106601-15106620 | None:intergenic | 25.0% |
| ! | TATAATAGTACTAAACTGAG+AGG | - | chr3_4:15106613-15106632 | Msa0492070:CDS | 25.0% |
| !! | ATAGTTTCTAGATTAAGCAA+TGG | - | chr3_4:15106785-15106804 | Msa0492070:intron | 25.0% |
| !!! | AGTAATGAACATTTTGACAA+GGG | + | chr3_4:15106972-15106991 | None:intergenic | 25.0% |
| ! | TTGTCAAAATGTTCATTACT+GGG | - | chr3_4:15106972-15106991 | Msa0492070:intron | 25.0% |
| !! | AATCAAACGTTGAACATTTT+CGG | + | chr3_4:15107053-15107072 | None:intergenic | 25.0% |
| ! | ATAGATGACCTTGAATTATA+GGG | + | chr3_4:15107246-15107265 | None:intergenic | 25.0% |
| ! | AATAGATGACCTTGAATTAT+AGG | + | chr3_4:15107247-15107266 | None:intergenic | 25.0% |
| !!! | TTTCATTTTTCTTCTCACTT+TGG | + | chr3_4:15107308-15107327 | None:intergenic | 25.0% |
| ! | AGGAAAATAACATCAAAATC+AGG | - | chr3_4:15107365-15107384 | Msa0492070:CDS | 25.0% |
| ! | ATGACTTTCATCAAGATATT+CGG | + | chr3_4:15107446-15107465 | None:intergenic | 25.0% |
| ! | ACAAAATAGATATCAAAAGC+TGG | + | chr3_4:15107600-15107619 | None:intergenic | 25.0% |
| ! | AATATTGGAAGATAAAGAGA+AGG | - | chr3_4:15107978-15107997 | Msa0492070:intron | 25.0% |
| !! | TCTTTTGCAAGATGAAATTT+GGG | - | chr3_4:15108035-15108054 | Msa0492070:CDS | 25.0% |
| ! | AATTTCATTGCGAAATTATC+AGG | - | chr3_4:15108069-15108088 | Msa0492070:CDS | 25.0% |
| ! | GATGTTGGAGAAAATATTTA+AGG | - | chr3_4:15108155-15108174 | Msa0492070:CDS | 25.0% |
| ! | ATATTCATTCTCATAGAGAA+AGG | + | chr3_4:15108333-15108352 | None:intergenic | 25.0% |
| ! | CTCTATGAGAATGAATATTA+TGG | - | chr3_4:15108335-15108354 | Msa0492070:CDS | 25.0% |
| !!! | AAGCATGAAGTTCATTTTTT+TGG | - | chr3_4:15108520-15108539 | Msa0492070:CDS | 25.0% |
| ! | AAGGTTGTAAAGAAAAAATC+AGG | - | chr3_4:15108629-15108648 | Msa0492070:exon | 25.0% |
| TCACTCAATTCATTCAAGAT+TGG | + | chr3_4:15104964-15104983 | None:intergenic | 30.0% | |
| ! | TGTCCTCAATTTGCTTAATA+GGG | + | chr3_4:15105092-15105111 | None:intergenic | 30.0% |
| ! | ATGTCCTCAATTTGCTTAAT+AGG | + | chr3_4:15105093-15105112 | None:intergenic | 30.0% |
| GAAAATCAATAGACACTTCA+AGG | + | chr3_4:15105161-15105180 | None:intergenic | 30.0% | |
| ATGATGAATGCAAGATTTGA+CGG | - | chr3_4:15105210-15105229 | Msa0492070:three_prime_UTR | 30.0% | |
| ! | AATTTTTCATGAGTGAAACG+AGG | - | chr3_4:15105265-15105284 | Msa0492070:CDS | 30.0% |
| ! | GTGATTTTGCAACTTAAGAA+TGG | - | chr3_4:15105336-15105355 | Msa0492070:CDS | 30.0% |
| !!! | TTGCTAAGAAGTATTGCTTT+TGG | - | chr3_4:15105516-15105535 | Msa0492070:CDS | 30.0% |
| TTGTGAGTTGTAACAATGTT+TGG | + | chr3_4:15105830-15105849 | None:intergenic | 30.0% | |
| TTTATAAAGTGGTACAATGC+AGG | - | chr3_4:15105906-15105925 | Msa0492070:CDS | 30.0% | |
| TAAAAGACAAGTATCTGTTG+AGG | + | chr3_4:15106247-15106266 | None:intergenic | 30.0% | |
| ! | AGTTTTACACTGACATCTAA+TGG | - | chr3_4:15106440-15106459 | Msa0492070:CDS | 30.0% |
| TTATGCATGCTACTGTAAAT+CGG | + | chr3_4:15106578-15106597 | None:intergenic | 30.0% | |
| ATGCATAACCTTTAAATCTG+TGG | - | chr3_4:15106590-15106609 | Msa0492070:CDS | 30.0% | |
| TGAGAATGAGTGTTACATAT+AGG | - | chr3_4:15106696-15106715 | Msa0492070:CDS | 30.0% | |
| GAGAATGAGTGTTACATATA+GGG | - | chr3_4:15106697-15106716 | Msa0492070:CDS | 30.0% | |
| TCAAATTATCTTGTTACTGC+AGG | - | chr3_4:15106848-15106867 | Msa0492070:intron | 30.0% | |
| CAAATTATCTTGTTACTGCA+GGG | - | chr3_4:15106849-15106868 | Msa0492070:intron | 30.0% | |
| !! | GTAATGAACATTTTGACAAG+GGG | + | chr3_4:15106971-15106990 | None:intergenic | 30.0% |
| !! | CAGTAATGAACATTTTGACA+AGG | + | chr3_4:15106973-15106992 | None:intergenic | 30.0% |
| CTTGTCAAAATGTTCATTAC+TGG | - | chr3_4:15106971-15106990 | Msa0492070:intron | 30.0% | |
| ! | ACTACTCTTACCTTTTCTTA+AGG | - | chr3_4:15107345-15107364 | Msa0492070:intron | 30.0% |
| TAACATCAAAATCAGGTGTA+AGG | - | chr3_4:15107372-15107391 | Msa0492070:CDS | 30.0% | |
| AAGTAACCGATATACTCAAA+AGG | - | chr3_4:15107563-15107582 | Msa0492070:CDS | 30.0% | |
| AGTAACCGATATACTCAAAA+GGG | - | chr3_4:15107564-15107583 | Msa0492070:CDS | 30.0% | |
| !! | ATTAGCCCTTTTGAGTATAT+CGG | + | chr3_4:15107572-15107591 | None:intergenic | 30.0% |
| ! | TCGATTAAGCTATTTGTTGA+TGG | + | chr3_4:15107646-15107665 | None:intergenic | 30.0% |
| ! | CAAGAAACTACAACTTGTTT+CGG | - | chr3_4:15107708-15107727 | Msa0492070:intron | 30.0% |
| TTCACCAATCACAAAATCAA+GGG | - | chr3_4:15107777-15107796 | Msa0492070:intron | 30.0% | |
| !! | ACATTTTGTTTAGTCAAAGC+AGG | - | chr3_4:15107934-15107953 | Msa0492070:intron | 30.0% |
| TTCACGACTTATCGAAATAT+TGG | - | chr3_4:15107963-15107982 | Msa0492070:intron | 30.0% | |
| ! | CTCTTTTGCAAGATGAAATT+TGG | - | chr3_4:15108034-15108053 | Msa0492070:CDS | 30.0% |
| CAAGATGAAATTTGGGAAAA+TGG | - | chr3_4:15108042-15108061 | Msa0492070:CDS | 30.0% | |
| !! | AGGTTCAAGAAAAAGCATTA+TGG | - | chr3_4:15108133-15108152 | Msa0492070:CDS | 30.0% |
| !! | AGAAAAAGCATTATGGATGT+TGG | - | chr3_4:15108140-15108159 | Msa0492070:CDS | 30.0% |
| GAAGAACATAGAGTGAAATA+TGG | - | chr3_4:15108180-15108199 | Msa0492070:CDS | 30.0% | |
| ! | TCAAGTGGTTCTTATTGATT+TGG | - | chr3_4:15108212-15108231 | Msa0492070:CDS | 30.0% |
| CATTCATTTATGTGCATGTT+TGG | - | chr3_4:15108380-15108399 | Msa0492070:CDS | 30.0% | |
| ACATGAGTTTGATGAAATCA+CGG | + | chr3_4:15108494-15108513 | None:intergenic | 30.0% | |
| !!! | AGAATGGTTTTATGTGTTTC+AGG | + | chr3_4:15108582-15108601 | None:intergenic | 30.0% |
| CAACATGGAAAACTCAGAAA+AGG | + | chr3_4:15104926-15104945 | None:intergenic | 35.0% | |
| ! | CTTTTCTGAGTTTTCCATGT+TGG | - | chr3_4:15104924-15104943 | Msa0492070:three_prime_UTR | 35.0% |
| TGGTAATTTCTCAACCAACA+TGG | + | chr3_4:15104941-15104960 | None:intergenic | 35.0% | |
| CTCAATTCATTCAAGATTGG+TGG | + | chr3_4:15104961-15104980 | None:intergenic | 35.0% | |
| GAGTGATAACAGTGTTGTAT+TGG | - | chr3_4:15104978-15104997 | Msa0492070:three_prime_UTR | 35.0% | |
| ! | TCCAACGATTTTCGAATTGA+GGG | + | chr3_4:15105009-15105028 | None:intergenic | 35.0% |
| ! | TTCCAACGATTTTCGAATTG+AGG | + | chr3_4:15105010-15105029 | None:intergenic | 35.0% |
| ACACCCTATTAAGCAAATTG+AGG | - | chr3_4:15105086-15105105 | Msa0492070:three_prime_UTR | 35.0% | |
| CTAAAGGAGTTAATGAGAAG+CGG | - | chr3_4:15105393-15105412 | Msa0492070:CDS | 35.0% | |
| GTTAATGAGAAGCGGAAAAT+TGG | - | chr3_4:15105401-15105420 | Msa0492070:CDS | 35.0% | |
| AACTAGACGCTTGAAAAGAA+AGG | + | chr3_4:15105460-15105479 | None:intergenic | 35.0% | |
| ACTTAGTTGCTTATCCAAAC+AGG | + | chr3_4:15105631-15105650 | None:intergenic | 35.0% | |
| ACTTATATGACAAGCACTTG+TGG | + | chr3_4:15105666-15105685 | None:intergenic | 35.0% | |
| ! | GGTTGAATTTTTATCAGCAG+TGG | - | chr3_4:15105942-15105961 | Msa0492070:CDS | 35.0% |
| ! | TCAAGGGTGTATTGTTATGT+TGG | - | chr3_4:15106065-15106084 | Msa0492070:CDS | 35.0% |
| ACATGATGCAGCAAAGTTAT+TGG | - | chr3_4:15106122-15106141 | Msa0492070:CDS | 35.0% | |
| TCCTTCAAATACTGAACTAG+TGG | + | chr3_4:15106207-15106226 | None:intergenic | 35.0% | |
| CTAGTTCAGTATTTGAAGGA+AGG | - | chr3_4:15106207-15106226 | Msa0492070:CDS | 35.0% | |
| TATTTGAAGGAAGGTAATGC+AGG | - | chr3_4:15106216-15106235 | Msa0492070:CDS | 35.0% | |
| GAAGCAGAAAAGTTAGCATT+TGG | - | chr3_4:15106364-15106383 | Msa0492070:CDS | 35.0% | |
| TGACATGAACAAGATCCTAA+TGG | - | chr3_4:15106874-15106893 | Msa0492070:intron | 35.0% | |
| TGCGCTTAGAGATGATAAAT+TGG | + | chr3_4:15107008-15107027 | None:intergenic | 35.0% | |
| ! | TTGATTCGATCAGGAATTAC+AGG | - | chr3_4:15107067-15107086 | Msa0492070:intron | 35.0% |
| CTTTCAAGCCCTATAATTCA+AGG | - | chr3_4:15107235-15107254 | Msa0492070:intron | 35.0% | |
| AATAGCATGTCTTCTCATCT+TGG | - | chr3_4:15107277-15107296 | Msa0492070:intron | 35.0% | |
| AAGATATTCGGTCAACTCAT+CGG | + | chr3_4:15107434-15107453 | None:intergenic | 35.0% | |
| !!! | GTTACTTTTTTATCGCTAGC+AGG | + | chr3_4:15107550-15107569 | None:intergenic | 35.0% |
| GTTCACCAATCACAAAATCA+AGG | - | chr3_4:15107776-15107795 | Msa0492070:intron | 35.0% | |
| CTCAAAATTCACTCTCTCTT+AGG | - | chr3_4:15107824-15107843 | Msa0492070:intron | 35.0% | |
| GGAAATGTAGAAAGTCAAAG+TGG | - | chr3_4:15107845-15107864 | Msa0492070:intron | 35.0% | |
| TATGTGCATGTTTGGATTGA+CGG | - | chr3_4:15108388-15108407 | Msa0492070:CDS | 35.0% | |
| ! | ACAGTGAACGGTCATAATTT+TGG | - | chr3_4:15108427-15108446 | Msa0492070:CDS | 35.0% |
| GAGGACATGACACATGATAT+CGG | - | chr3_4:15105105-15105124 | Msa0492070:three_prime_UTR | 40.0% | |
| TTTCATGAGTGAAACGAGGA+CGG | - | chr3_4:15105269-15105288 | Msa0492070:CDS | 40.0% | |
| ATGAGAAGCGGAAAATTGGA+CGG | - | chr3_4:15105405-15105424 | Msa0492070:CDS | 40.0% | |
| ! | CAAGCGTCTAGTTTCATGTA+AGG | - | chr3_4:15105467-15105486 | Msa0492070:CDS | 40.0% |
| AGTGGTGAAGTCTCTTACAA+GGG | - | chr3_4:15105960-15105979 | Msa0492070:CDS | 40.0% | |
| TTACAAGGGATTCAGAAGAG+AGG | - | chr3_4:15105974-15105993 | Msa0492070:CDS | 40.0% | |
| AAATGCACTTCATATGGCTG+AGG | - | chr3_4:15106167-15106186 | Msa0492070:CDS | 40.0% | |
| GCCACTAGTTCAGTATTTGA+AGG | - | chr3_4:15106203-15106222 | Msa0492070:CDS | 40.0% | |
| !! | TAGAAAGTGCTGTTGCCATT+AGG | + | chr3_4:15106892-15106911 | None:intergenic | 40.0% |
| TAATGGCAACAGCACTTTCT+AGG | - | chr3_4:15106891-15106910 | Msa0492070:intron | 40.0% | |
| ! | GTTCAACGTTTGATTCGATC+AGG | - | chr3_4:15107058-15107077 | Msa0492070:intron | 40.0% |
| ATCTGTGCTCATGACACTAA+GGG | - | chr3_4:15107120-15107139 | Msa0492070:intron | 40.0% | |
| AACATCTTCGTTGACGAGAA+TGG | + | chr3_4:15107188-15107207 | None:intergenic | 40.0% | |
| ATCCACATCAGAGAGTGAAA+AGG | - | chr3_4:15107495-15107514 | Msa0492070:CDS | 40.0% | |
| AGCTTAATCGAGAATGCTAC+CGG | - | chr3_4:15107655-15107674 | Msa0492070:intron | 40.0% | |
| TGTCAGATGAATTCGTGAAG+CGG | + | chr3_4:15107690-15107709 | None:intergenic | 40.0% | |
| ! | CAACTTGTTTCGGTACAACT+CGG | - | chr3_4:15107718-15107737 | Msa0492070:intron | 40.0% |
| ! | AACTTGTTTCGGTACAACTC+GGG | - | chr3_4:15107719-15107738 | Msa0492070:intron | 40.0% |
| ! | GAGAGCAATTTTACGAGCAA+AGG | + | chr3_4:15107751-15107770 | None:intergenic | 40.0% |
| TCACAATACGCATTCGTTGA+AGG | + | chr3_4:15107883-15107902 | None:intergenic | 40.0% | |
| GCGTATTGTGAAGTTCATGA+TGG | - | chr3_4:15107892-15107911 | Msa0492070:intron | 40.0% | |
| TTGTTTAGTCAAAGCAGGTG+CGG | - | chr3_4:15107939-15107958 | Msa0492070:intron | 40.0% | |
| !! | TCTAGAAGTTGGTGATGCAA+AGG | - | chr3_4:15108113-15108132 | Msa0492070:CDS | 40.0% |
| ATATGGAGAATCTGCTCAAG+TGG | - | chr3_4:15108197-15108216 | Msa0492070:CDS | 40.0% | |
| ! | GTTTGGATTGACGGTTAGTT+TGG | - | chr3_4:15108397-15108416 | Msa0492070:CDS | 40.0% |
| GCCCTCAATTCGAAAATCGT+TGG | - | chr3_4:15105005-15105024 | Msa0492070:three_prime_UTR | 45.0% | |
| ACATGACACATGATATCGGC+CGG | - | chr3_4:15105109-15105128 | Msa0492070:three_prime_UTR | 45.0% | |
| GACGGTTGGAGAAATAGAAG+AGG | - | chr3_4:15105287-15105306 | Msa0492070:CDS | 45.0% | |
| CTTGCACATTTAGGCCTGTT+TGG | - | chr3_4:15105614-15105633 | Msa0492070:CDS | 45.0% | |
| TGGTACAATGCAGGAGAAGA+TGG | - | chr3_4:15105915-15105934 | Msa0492070:CDS | 45.0% | |
| AATGCAGGAGAAGATGGTTG+AGG | - | chr3_4:15105921-15105940 | Msa0492070:CDS | 45.0% | |
| CAGTGGTGAAGTCTCTTACA+AGG | - | chr3_4:15105959-15105978 | Msa0492070:CDS | 45.0% | |
| AAGGGATTCAGAAGAGAGGA+GGG | - | chr3_4:15105978-15105997 | Msa0492070:CDS | 45.0% | |
| ATGTTGGTCGCCATCCTTAA+TGG | - | chr3_4:15106081-15106100 | Msa0492070:CDS | 45.0% | |
| AGGGTCATCACCATTAAGGA+TGG | + | chr3_4:15106094-15106113 | None:intergenic | 45.0% | |
| CAACAGGGTCATCACCATTA+AGG | + | chr3_4:15106098-15106117 | None:intergenic | 45.0% | |
| CTGCATCATGTGAAGCAACA+GGG | + | chr3_4:15106113-15106132 | None:intergenic | 45.0% | |
| GATCACAGCAAACTTACCCT+CGG | - | chr3_4:15106926-15106945 | Msa0492070:intron | 45.0% | |
| AAACTTACCCTCGGAGAAGA+TGG | - | chr3_4:15106935-15106954 | Msa0492070:intron | 45.0% | |
| CATCTGTGCTCATGACACTA+AGG | - | chr3_4:15107119-15107138 | Msa0492070:intron | 45.0% | |
| TCTTGCACGAATTGCTCAGT+CGG | - | chr3_4:15107159-15107178 | Msa0492070:intron | 45.0% | |
| CACATCAGAGAGTGAAAAGG+CGG | - | chr3_4:15107498-15107517 | Msa0492070:CDS | 45.0% | |
| CGTGAAGCGGTTTATAACAC+CGG | + | chr3_4:15107677-15107696 | None:intergenic | 45.0% | |
| ACTTGTTTCGGTACAACTCG+GGG | - | chr3_4:15107720-15107739 | Msa0492070:intron | 45.0% | |
| ! | GCAGCCCTTGATTTTGTGAT+TGG | + | chr3_4:15107784-15107803 | None:intergenic | 45.0% |
| ATCAAGGGCTGCAAACTCTT+TGG | - | chr3_4:15107792-15107811 | Msa0492070:intron | 45.0% | |
| !! | TGGATTGACGGTTAGTTTGG+CGG | - | chr3_4:15108400-15108419 | Msa0492070:CDS | 45.0% |
| TTTGGCGGAATCACAGTGAA+CGG | - | chr3_4:15108415-15108434 | Msa0492070:CDS | 45.0% | |
| CAAGCAAAACTCCCAACGAC+CGG | + | chr3_4:15105131-15105150 | None:intergenic | 50.0% | |
| ATGAGTGAAACGAGGACGGT+TGG | - | chr3_4:15105273-15105292 | Msa0492070:CDS | 50.0% | |
| AGAAGCGGAAAATTGGACGG+TGG | - | chr3_4:15105408-15105427 | Msa0492070:CDS | 50.0% | |
| GGACGGTGGTTTGATTAACG+AGG | - | chr3_4:15105422-15105441 | Msa0492070:CDS | 50.0% | |
| CAAGGGATTCAGAAGAGAGG+AGG | - | chr3_4:15105977-15105996 | Msa0492070:CDS | 50.0% | |
| GAACTGCTGGAACGTTAGAG+AGG | + | chr3_4:15106026-15106045 | None:intergenic | 50.0% | |
| CTAACGTTCCAGCAGTTCGA+AGG | - | chr3_4:15106028-15106047 | Msa0492070:CDS | 50.0% | |
| AGGCGGATCGGAAGAATTCA+AGG | - | chr3_4:15106048-15106067 | Msa0492070:CDS | 50.0% | |
| GGCGGATCGGAAGAATTCAA+GGG | - | chr3_4:15106049-15106068 | Msa0492070:CDS | 50.0% | |
| GCTGCATCATGTGAAGCAAC+AGG | + | chr3_4:15106114-15106133 | None:intergenic | 50.0% | |
| ! | TGGCTGAGGCTGGTTACTTT+AGG | - | chr3_4:15106181-15106200 | Msa0492070:CDS | 50.0% |
| GGCAACAGCACTTTCTAGGT+TGG | - | chr3_4:15106895-15106914 | Msa0492070:intron | 50.0% | |
| AATCGCTCCATCTTCTCCGA+GGG | + | chr3_4:15106945-15106964 | None:intergenic | 50.0% | |
| CGTGCAAGAATAGCTGATGC+AGG | + | chr3_4:15107148-15107167 | None:intergenic | 50.0% | |
| ! | CGCCTTTTCACTCTCTGATG+TGG | + | chr3_4:15107500-15107519 | None:intergenic | 50.0% |
| ACATGATATCGGCCGGTCGT+TGG | - | chr3_4:15105116-15105135 | Msa0492070:three_prime_UTR | 55.0% | |
| CATGATATCGGCCGGTCGTT+GGG | - | chr3_4:15105117-15105136 | Msa0492070:three_prime_UTR | 55.0% | |
| AGAAGAGAGGAGGGAAGCAG+TGG | - | chr3_4:15105987-15106006 | Msa0492070:CDS | 55.0% | |
| GAAGAGAGGAGGGAAGCAGT+GGG | - | chr3_4:15105988-15106007 | Msa0492070:CDS | 55.0% | |
| ACGTTCCAGCAGTTCGAAGG+CGG | - | chr3_4:15106031-15106050 | Msa0492070:CDS | 55.0% | |
| GCACTTCATATGGCTGAGGC+TGG | - | chr3_4:15106171-15106190 | Msa0492070:CDS | 55.0% | |
| CAATCGCTCCATCTTCTCCG+AGG | + | chr3_4:15106946-15106965 | None:intergenic | 55.0% | |
| AGAGAGTGAAAAGGCGGCTG+CGG | - | chr3_4:15107504-15107523 | Msa0492070:CDS | 55.0% | |
| CCAGCAGTTCGAAGGCGGAT+CGG | - | chr3_4:15106036-15106055 | Msa0492070:CDS | 60.0% | |
| AGTGAAAAGGCGGCTGCGGT+TGG | - | chr3_4:15107508-15107527 | Msa0492070:CDS | 60.0% | |
| CCGATCCGCCTTCGAACTGC+TGG | + | chr3_4:15106039-15106058 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 15104920 | 15108666 | 15104920 | ID=Msa0492070;Name=Msa0492070 |
| chr3_4 | mRNA | 15104920 | 15108666 | 15104920 | ID=Msa0492070-mRNA-1;Parent=Msa0492070;Name=Msa0492070-mRNA-1;_AED=0.31;_eAED=0.31;_QI=20|1|1|1|1|1|3|343|789 |
| chr3_4 | exon | 15104920 | 15106716 | 15104920 | ID=Msa0492070-mRNA-1:exon:4488;Parent=Msa0492070-mRNA-1 |
| chr3_4 | exon | 15107358 | 15107658 | 15107358 | ID=Msa0492070-mRNA-1:exon:4487;Parent=Msa0492070-mRNA-1 |
| chr3_4 | exon | 15108032 | 15108666 | 15108032 | ID=Msa0492070-mRNA-1:exon:4486;Parent=Msa0492070-mRNA-1 |
| chr3_4 | five_prime_UTR | 15108647 | 15108666 | 15108647 | ID=Msa0492070-mRNA-1:five_prime_utr;Parent=Msa0492070-mRNA-1 |
| chr3_4 | CDS | 15108032 | 15108646 | 15108032 | ID=Msa0492070-mRNA-1:cds;Parent=Msa0492070-mRNA-1 |
| chr3_4 | CDS | 15107358 | 15107658 | 15107358 | ID=Msa0492070-mRNA-1:cds;Parent=Msa0492070-mRNA-1 |
| chr3_4 | CDS | 15105263 | 15106716 | 15105263 | ID=Msa0492070-mRNA-1:cds;Parent=Msa0492070-mRNA-1 |
| chr3_4 | three_prime_UTR | 15104920 | 15105262 | 15104920 | ID=Msa0492070-mRNA-1:three_prime_utr;Parent=Msa0492070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
