Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515500 | XP_003602071.2 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 2.36e-159 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515500 | sp|O80365|ARR8_ARATH | 58.170 | 153 | 49 | 3 | 22 | 173 | 9 | 147 | 6.92e-58 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515500 | B7FMM2 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 1.13e-159 | 451 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0515500 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374330 | Msa0515500 | 0.918031 | 2.572175e-86 | -8.615850e-47 |
| Msa0374410 | Msa0515500 | 0.920955 | 6.632148e-88 | -8.615850e-47 |
| Msa0469690 | Msa0515500 | 0.878983 | 1.804824e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515500 | MtrunA17_Chr3g0124861 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 2.17e-163 | 451 |
| Msa0515500 | MtrunA17_Chr8g0352871 | 53.933 | 178 | 67 | 2 | 19 | 195 | 6 | 169 | 1.84e-58 | 183 |
| Msa0515500 | MtrunA17_Chr3g0082861 | 60.131 | 153 | 47 | 2 | 22 | 173 | 4 | 143 | 2.24e-58 | 182 |
| Msa0515500 | MtrunA17_Chr7g0256551 | 54.706 | 170 | 58 | 5 | 22 | 186 | 9 | 164 | 2.61e-54 | 174 |
| Msa0515500 | MtrunA17_Chr3g0118211 | 50.649 | 154 | 53 | 3 | 21 | 173 | 22 | 153 | 1.05e-48 | 159 |
| Msa0515500 | MtrunA17_Chr5g0414931 | 45.455 | 187 | 82 | 5 | 20 | 204 | 14 | 182 | 4.50e-48 | 158 |
| Msa0515500 | MtrunA17_Chr3g0128691 | 53.472 | 144 | 48 | 2 | 23 | 166 | 19 | 143 | 5.79e-48 | 155 |
| Msa0515500 | MtrunA17_Chr1g0170741 | 53.289 | 152 | 51 | 4 | 20 | 170 | 6 | 138 | 2.90e-46 | 152 |
| Msa0515500 | MtrunA17_Chr4g0059571 | 49.351 | 154 | 55 | 3 | 21 | 173 | 25 | 156 | 2.22e-45 | 150 |
| Msa0515500 | MtrunA17_Chr4g0021731 | 47.573 | 103 | 32 | 2 | 19 | 121 | 8 | 88 | 2.81e-25 | 95.1 |
| Msa0515500 | MtrunA17_Chr1g0181811 | 28.177 | 181 | 120 | 6 | 35 | 213 | 74 | 246 | 5.35e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515500 | AT2G41310.1 | 58.170 | 153 | 49 | 3 | 22 | 173 | 9 | 147 | 7.04e-59 | 186 |
| Msa0515500 | AT3G57040.2 | 57.051 | 156 | 54 | 3 | 19 | 173 | 6 | 149 | 2.70e-56 | 179 |
| Msa0515500 | AT3G57040.1 | 57.051 | 156 | 54 | 3 | 19 | 173 | 6 | 149 | 2.70e-56 | 179 |
| Msa0515500 | AT1G59940.1 | 47.647 | 170 | 66 | 3 | 11 | 179 | 22 | 169 | 4.70e-50 | 164 |
| Msa0515500 | AT1G59940.2 | 47.647 | 170 | 66 | 3 | 11 | 179 | 114 | 261 | 2.76e-48 | 162 |
| Msa0515500 | AT1G10470.3 | 50.000 | 162 | 58 | 3 | 17 | 177 | 15 | 154 | 4.08e-48 | 159 |
| Msa0515500 | AT3G48100.1 | 50.955 | 157 | 55 | 3 | 22 | 177 | 25 | 160 | 5.01e-48 | 157 |
| Msa0515500 | AT1G10470.1 | 50.000 | 162 | 58 | 3 | 17 | 177 | 29 | 168 | 6.29e-48 | 159 |
| Msa0515500 | AT5G62920.1 | 53.289 | 152 | 48 | 3 | 22 | 172 | 25 | 154 | 3.15e-47 | 155 |
| Msa0515500 | AT1G19050.1 | 50.327 | 153 | 53 | 3 | 21 | 172 | 23 | 153 | 1.61e-45 | 151 |
| Msa0515500 | AT3G56380.1 | 51.299 | 154 | 53 | 3 | 19 | 171 | 17 | 149 | 2.84e-45 | 149 |
| Msa0515500 | AT3G56380.2 | 50.323 | 155 | 54 | 3 | 19 | 171 | 17 | 150 | 7.45e-45 | 147 |
| Msa0515500 | AT1G74890.1 | 48.718 | 156 | 57 | 3 | 21 | 175 | 17 | 150 | 4.74e-44 | 147 |
| Msa0515500 | AT2G40670.1 | 46.835 | 158 | 54 | 3 | 20 | 171 | 27 | 160 | 1.22e-41 | 140 |
| Msa0515500 | AT2G40670.2 | 45.912 | 159 | 55 | 3 | 20 | 171 | 27 | 161 | 3.37e-41 | 139 |
| Msa0515500 | AT2G07440.1 | 53.846 | 52 | 24 | 0 | 122 | 173 | 10 | 61 | 8.29e-15 | 69.7 |
| Msa0515500 | AT1G10470.2 | 36.471 | 85 | 53 | 1 | 92 | 175 | 6 | 90 | 1.41e-13 | 67.4 |
Find 72 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCGCCAACCCTTTCATTT+TGG | 0.085264 | 3_4:-66737234 | None:intergenic |
| CTGCACTGCAGGGATCTTCT+TGG | 0.261594 | 3_4:+66736684 | Msa0515500:intron |
| TCTCTCATTCCCCTTTCAAT+TGG | 0.305421 | 3_4:-66732186 | None:intergenic |
| GATAAGGCTTTGAAATATCT+TGG | 0.316965 | 3_4:+66732821 | Msa0515500:CDS |
| TGCAATCTTTAAATTACTTT+GGG | 0.329603 | 3_4:+66737465 | Msa0515500:three_prime_UTR |
| TTGCAATCTTTAAATTACTT+TGG | 0.342091 | 3_4:+66737464 | Msa0515500:three_prime_UTR |
| TCTGATGACATAACCACAAC+TGG | 0.369928 | 3_4:-66736716 | None:intergenic |
| AATTGATATGGAGCTTGCTT+TGG | 0.375819 | 3_4:+66732495 | Msa0515500:exon |
| AAGCAAGCTCCATATCAATT+TGG | 0.381935 | 3_4:-66732492 | None:intergenic |
| TATTCATCACCAAATTGATA+TGG | 0.391096 | 3_4:+66732483 | Msa0515500:exon |
| CAAATAAAATCCAATTGAAA+GGG | 0.426510 | 3_4:+66732176 | Msa0515500:five_prime_UTR |
| CATTTGTACATAAATTTAAG+TGG | 0.429695 | 3_4:-66737413 | None:intergenic |
| ATTGATCTCTCTGGAGGCTC+AGG | 0.433469 | 3_4:-66737209 | None:intergenic |
| GTCCGAGTCTGTGGTGGTAG+TGG | 0.436880 | 3_4:-66737105 | None:intergenic |
| GGGAAGATGATGAATGAGAG+TGG | 0.441227 | 3_4:-66732401 | None:intergenic |
| ATGACAGATTATTGCATGCC+TGG | 0.445954 | 3_4:+66734092 | Msa0515500:CDS |
| TAGTAGCTTTATTCTATTAG+TGG | 0.456713 | 3_4:-66732346 | None:intergenic |
| AATGAAAGGGTTGGCGGTGG+TGG | 0.458526 | 3_4:+66737238 | Msa0515500:CDS |
| GCTAATAGGTGCTTGGAAGA+AGG | 0.458769 | 3_4:+66736969 | Msa0515500:intron |
| TGCAATATCTAGACGACAAA+GGG | 0.464493 | 3_4:-66737446 | None:intergenic |
| CAACGTGGTGGAGAGAATCT+AGG | 0.465538 | 3_4:+66732239 | Msa0515500:five_prime_UTR |
| AGTAGCTTTATTCTATTAGT+GGG | 0.472302 | 3_4:-66732345 | None:intergenic |
| CTGTGTGGACTCTGGAGATA+AGG | 0.474705 | 3_4:+66732805 | Msa0515500:CDS |
| ACTTACATGCTAATTCTAGA+AGG | 0.476558 | 3_4:-66736746 | None:intergenic |
| TCAAATAAAATCCAATTGAA+AGG | 0.478763 | 3_4:+66732175 | Msa0515500:five_prime_UTR |
| ATTACCTCTTGTAGCTGCAA+TGG | 0.489838 | 3_4:-66732926 | None:intergenic |
| CTAATAGGTGCTTGGAAGAA+GGG | 0.490036 | 3_4:+66736970 | Msa0515500:intron |
| TAATTTGGCTAATAGGTGCT+TGG | 0.497490 | 3_4:+66736962 | Msa0515500:intron |
| ACAGTTACCTGTGTGGACTC+TGG | 0.503672 | 3_4:+66732797 | Msa0515500:intron |
| CTCTGGAGGCTCAGGAGACA+TGG | 0.506463 | 3_4:-66737201 | None:intergenic |
| CATCAGCATGATGACCCAAT+GGG | 0.522832 | 3_4:+66732121 | None:intergenic |
| TTGGAAAGATGTTCCAGTTG+TGG | 0.523397 | 3_4:+66736703 | Msa0515500:CDS |
| AGATCAATGCCCAAAATGAA+AGG | 0.528945 | 3_4:+66737224 | Msa0515500:CDS |
| CTTAGAGATTCTTCATGCAA+AGG | 0.532173 | 3_4:+66732622 | Msa0515500:CDS |
| TAGATGATAGTGTCATTGAT+AGG | 0.538094 | 3_4:+66732581 | Msa0515500:CDS |
| TTGGGCATTGATCTCTCTGG+AGG | 0.540639 | 3_4:-66737215 | None:intergenic |
| AAATCATAGCCACTCATCCC+AGG | 0.545060 | 3_4:-66734110 | None:intergenic |
| AACGTGGTGGAGAGAATCTA+GGG | 0.557971 | 3_4:+66732240 | Msa0515500:five_prime_UTR |
| GCCCAAAATGAAAGGGTTGG+CGG | 0.559802 | 3_4:+66737232 | Msa0515500:CDS |
| ACTGTAGTGGAACAGTGGTA+TGG | 0.562212 | 3_4:-66732307 | None:intergenic |
| TGCAAATCTGATAACTGAAG+AGG | 0.563149 | 3_4:-66737014 | None:intergenic |
| GCAAGAACACTTTCATGTGT+TGG | 0.563382 | 3_4:+66732555 | Msa0515500:CDS |
| TTCCACTACCACCACAGACT+CGG | 0.564431 | 3_4:+66737103 | Msa0515500:CDS |
| CCATCAGCATGATGACCCAA+TGG | 0.567336 | 3_4:+66732120 | None:intergenic |
| GATCAATGCCCAAAATGAAA+GGG | 0.575333 | 3_4:+66737225 | Msa0515500:CDS |
| TGACAGATTATTGCATGCCT+GGG | 0.579945 | 3_4:+66734093 | Msa0515500:CDS |
| TGCAATGGTTGTTGAAGAGG+AGG | 0.579983 | 3_4:-66732911 | None:intergenic |
| TGAGAGTGGGAAAAGAGAGG+TGG | 0.584714 | 3_4:-66732387 | None:intergenic |
| AGCTGCAATGGTTGTTGAAG+AGG | 0.586818 | 3_4:-66732914 | None:intergenic |
| ACATTAATAGTATCAGCAAA+CGG | 0.588740 | 3_4:+66737174 | Msa0515500:CDS |
| TAATAGGTGCTTGGAAGAAG+GGG | 0.593866 | 3_4:+66736971 | Msa0515500:intron |
| GTTGTCGTCGTCCGAGTCTG+TGG | 0.598775 | 3_4:-66737114 | None:intergenic |
| AATGCCCAAAATGAAAGGGT+TGG | 0.602173 | 3_4:+66737229 | Msa0515500:CDS |
| GGAAGATGATGAATGAGAGT+GGG | 0.604844 | 3_4:-66732400 | None:intergenic |
| TTGATAGGATGCTTCTAGAG+AGG | 0.609363 | 3_4:+66732596 | Msa0515500:CDS |
| TAATAGTATCAGCAAACGGA+AGG | 0.609687 | 3_4:+66737178 | Msa0515500:CDS |
| ACAACCATTGCAGCTACAAG+AGG | 0.610346 | 3_4:+66732922 | Msa0515500:CDS |
| TAATATAGAATACTTTGTTG+AGG | 0.614359 | 3_4:-66732876 | None:intergenic |
| AAATAAAATCCAATTGAAAG+GGG | 0.615171 | 3_4:+66732177 | Msa0515500:five_prime_UTR |
| TATTGCATGCCTGGGATGAG+TGG | 0.615464 | 3_4:+66734101 | Msa0515500:CDS |
| CAAAATGAAAGGGTTGGCGG+TGG | 0.616336 | 3_4:+66737235 | Msa0515500:CDS |
| TGATTTACTTAAAAGAGTCA+AGG | 0.620876 | 3_4:+66734127 | Msa0515500:CDS |
| TTGCAATATCTAGACGACAA+AGG | 0.621224 | 3_4:-66737447 | None:intergenic |
| GAATGAGAGTGGGAAAAGAG+AGG | 0.639186 | 3_4:-66732390 | None:intergenic |
| ACATAAATTTAAGTGGCTAG+TGG | 0.642603 | 3_4:-66737406 | None:intergenic |
| GTCGTCGTCCGAGTCTGTGG+TGG | 0.650795 | 3_4:-66737111 | None:intergenic |
| AAAATCGTACAAATTAAGAG+TGG | 0.659476 | 3_4:+66737270 | Msa0515500:three_prime_UTR |
| TGTTAAAACAGTTACCTGTG+TGG | 0.666037 | 3_4:+66732790 | Msa0515500:intron |
| CTTATCTCCAGAGTCCACAC+AGG | 0.676893 | 3_4:-66732804 | None:intergenic |
| GAGTAGTTGTACCAACGTGG+TGG | 0.683701 | 3_4:+66732227 | Msa0515500:five_prime_UTR |
| CTAGATTCTCTCCACCACGT+TGG | 0.728914 | 3_4:-66732238 | None:intergenic |
| AAAGAGTAGTTGTACCAACG+TGG | 0.745673 | 3_4:+66732224 | Msa0515500:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAAAATAAAAAAA+TGG | - | chr3_4:66734659-66734678 | None:intergenic | 0.0% |
| !! | TAATATATACATGTTATATA+TGG | + | chr3_4:66733394-66733413 | Msa0515500:intron | 10.0% |
| !!! | TATATACATTTTTTTTTTGA+AGG | + | chr3_4:66733632-66733651 | Msa0515500:intron | 10.0% |
| !!! | AACATTAAATTTTTATGTTT+GGG | + | chr3_4:66734017-66734036 | Msa0515500:intron | 10.0% |
| !!! | TTCAATTTTATATCTTATTT+TGG | - | chr3_4:66734577-66734596 | None:intergenic | 10.0% |
| !! | CTTATAAAAAAAATATTAGT+GGG | - | chr3_4:66734685-66734704 | None:intergenic | 10.0% |
| !!! | AAGTATTTAAGATATAATAA+AGG | - | chr3_4:66736830-66736849 | None:intergenic | 10.0% |
| !! | ATTTAATTAACAACTTAATT+TGG | + | chr3_4:66736947-66736966 | Msa0515500:intron | 10.0% |
| !!! | TTAGCTTTATTAATTTTATG+GGG | - | chr3_4:66733149-66733168 | None:intergenic | 15.0% |
| !!! | CTTAGCTTTATTAATTTTAT+GGG | - | chr3_4:66733150-66733169 | None:intergenic | 15.0% |
| !!! | ATATATATTCTCTTGTTTAT+AGG | + | chr3_4:66733751-66733770 | Msa0515500:intron | 15.0% |
| !!! | GAACATTAAATTTTTATGTT+TGG | + | chr3_4:66734016-66734035 | Msa0515500:intron | 15.0% |
| !!! | AGAAAATTAATTTTACTTCA+AGG | + | chr3_4:66734321-66734340 | Msa0515500:intron | 15.0% |
| !! | AACTTTATTGAAATTATGTT+TGG | - | chr3_4:66734500-66734519 | None:intergenic | 15.0% |
| !!! | AAGTATCTTTTTTTTAAAGA+AGG | + | chr3_4:66734531-66734550 | Msa0515500:intron | 15.0% |
| !! | AATAAAAAAATGGTTTATGT+GGG | - | chr3_4:66734649-66734668 | None:intergenic | 15.0% |
| !! | AAATAAAAAAATGGTTTATG+TGG | - | chr3_4:66734650-66734669 | None:intergenic | 15.0% |
| !! | CCTTATAAAAAAAATATTAG+TGG | - | chr3_4:66734686-66734705 | None:intergenic | 15.0% |
| !!! | CCACTAATATTTTTTTTATA+AGG | + | chr3_4:66734683-66734702 | Msa0515500:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTCCGTAT+TGG | - | chr3_4:66734808-66734827 | None:intergenic | 15.0% |
| !!! | AGCAAACTAATATTTTAATT+GGG | - | chr3_4:66734952-66734971 | None:intergenic | 15.0% |
| !!! | TTCGTTAATATTTTTTTCTT+CGG | - | chr3_4:66735176-66735195 | None:intergenic | 15.0% |
| !! | AATAAAAAATTGAAAGAGTT+TGG | - | chr3_4:66735338-66735357 | None:intergenic | 15.0% |
| !! | ATTCATCTATTAAAAAAATC+AGG | + | chr3_4:66735421-66735440 | Msa0515500:intron | 15.0% |
| !!! | TTTGATATTTGATTTTTAAG+TGG | - | chr3_4:66736197-66736216 | None:intergenic | 15.0% |
| !!! | TAAATTAAATCCTAACATTT+TGG | + | chr3_4:66736524-66736543 | Msa0515500:intron | 15.0% |
| !!! | AAATTAAATCCTAACATTTT+GGG | + | chr3_4:66736525-66736544 | Msa0515500:intron | 15.0% |
| !! | TCAAAAGAAGAAAAAATTAA+TGG | - | chr3_4:66736655-66736674 | None:intergenic | 15.0% |
| !! | TCAAATAAAATCCAATTGAA+AGG | + | chr3_4:66732175-66732194 | Msa0515500:five_prime_UTR | 20.0% |
| !! | CAAATAAAATCCAATTGAAA+GGG | + | chr3_4:66732176-66732195 | Msa0515500:five_prime_UTR | 20.0% |
| !! | AAATAAAATCCAATTGAAAG+GGG | + | chr3_4:66732177-66732196 | Msa0515500:five_prime_UTR | 20.0% |
| !! | TAATATAGAATACTTTGTTG+AGG | - | chr3_4:66732879-66732898 | None:intergenic | 20.0% |
| !!! | GCTTAGCTTTATTAATTTTA+TGG | - | chr3_4:66733151-66733170 | None:intergenic | 20.0% |
| !! | TGAATGAAAGTAATTTGATA+AGG | - | chr3_4:66733354-66733373 | None:intergenic | 20.0% |
| !! | ATACATGTTATATATGGATA+TGG | + | chr3_4:66733400-66733419 | Msa0515500:intron | 20.0% |
| !! | GTACTACATATATATGATAA+TGG | + | chr3_4:66733606-66733625 | Msa0515500:intron | 20.0% |
| !! | GAAAAAAGAATACAATTCAA+TGG | + | chr3_4:66733803-66733822 | Msa0515500:intron | 20.0% |
| !!! | TCTCTTTTTTAAACTTGAAT+AGG | + | chr3_4:66734193-66734212 | Msa0515500:intron | 20.0% |
| !!! | ATTTGTTTTTCTATTTGTAC+TGG | - | chr3_4:66734831-66734850 | None:intergenic | 20.0% |
| !! | CTAAATTAATACTAAAGAAC+AGG | - | chr3_4:66734920-66734939 | None:intergenic | 20.0% |
| !!! | GAGCAAACTAATATTTTAAT+TGG | - | chr3_4:66734953-66734972 | None:intergenic | 20.0% |
| !!! | GTTTTTTCATTGACATTTTT+CGG | - | chr3_4:66734984-66735003 | None:intergenic | 20.0% |
| !! | AATGTCAATGAAAAAACAAT+TGG | + | chr3_4:66734987-66735006 | Msa0515500:intron | 20.0% |
| !! | ACAATTGGTATTTGAAAAAA+AGG | + | chr3_4:66735002-66735021 | Msa0515500:intron | 20.0% |
| !!! | TCGTTAATATTTTTTTCTTC+GGG | - | chr3_4:66735175-66735194 | None:intergenic | 20.0% |
| !!! | ATGTGTTATGTTTCTAATAA+TGG | + | chr3_4:66735304-66735323 | Msa0515500:intron | 20.0% |
| !! | AAGTTAAAGTTAAAGTTGTT+TGG | - | chr3_4:66735595-66735614 | None:intergenic | 20.0% |
| !! | TTAAAGTCACACATATAATT+AGG | - | chr3_4:66735687-66735706 | None:intergenic | 20.0% |
| !!! | TATACTTCTTTTTGAATTGT+TGG | - | chr3_4:66735852-66735871 | None:intergenic | 20.0% |
| !!! | ACAATTCAAAAAGAAGTATA+AGG | + | chr3_4:66735852-66735871 | Msa0515500:intron | 20.0% |
| !!! | CAATTCAAAAAGAAGTATAA+GGG | + | chr3_4:66735853-66735872 | Msa0515500:intron | 20.0% |
| !! | AACTATTCAAAATACATACA+AGG | + | chr3_4:66735932-66735951 | Msa0515500:intron | 20.0% |
| !! | ATGCAACAATTTAAAGATTT+GGG | - | chr3_4:66736067-66736086 | None:intergenic | 20.0% |
| !!! | AGATAGATTTAGTTCATATA+TGG | - | chr3_4:66736489-66736508 | None:intergenic | 20.0% |
| !! | ACAAAAAAAGAATAGATACA+TGG | - | chr3_4:66736628-66736647 | None:intergenic | 20.0% |
| !! | AAATACTTCTTCAAAGAAAA+AGG | + | chr3_4:66736842-66736861 | Msa0515500:intron | 20.0% |
| !! | CATTTGTACATAAATTTAAG+TGG | - | chr3_4:66737416-66737435 | None:intergenic | 20.0% |
| !!! | AGTAGCTTTATTCTATTAGT+GGG | - | chr3_4:66732348-66732367 | None:intergenic | 25.0% |
| !!! | TAGTAGCTTTATTCTATTAG+TGG | - | chr3_4:66732349-66732368 | None:intergenic | 25.0% |
| ! | TATTCATCACCAAATTGATA+TGG | + | chr3_4:66732483-66732502 | Msa0515500:exon | 25.0% |
| ! | TCCTAATAATTGAGATTGTA+CGG | - | chr3_4:66732671-66732690 | None:intergenic | 25.0% |
| !! | AGAATTTTGTGTACTGAATT+TGG | + | chr3_4:66732735-66732754 | Msa0515500:intron | 25.0% |
| !!! | TTGGTTAAGTAATTGTTTTG+TGG | + | chr3_4:66732754-66732773 | Msa0515500:intron | 25.0% |
| !! | AACTATCTTGAAAACTTTTG+AGG | - | chr3_4:66732976-66732995 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGTCCAGAAAAAA+AGG | + | chr3_4:66733026-66733045 | Msa0515500:intron | 25.0% |
| !!! | AGCAAATATACCTTTTTTTC+TGG | - | chr3_4:66733039-66733058 | None:intergenic | 25.0% |
| ! | TAACAATTTCAACAGTCTAA+AGG | - | chr3_4:66733292-66733311 | None:intergenic | 25.0% |
| ! | ATGAAAGTAATTTGATAAGG+AGG | - | chr3_4:66733351-66733370 | None:intergenic | 25.0% |
| !!! | ATGTTGATGAAGGTAATTTT+TGG | - | chr3_4:66733438-66733457 | None:intergenic | 25.0% |
| !! | GGAATTATATATGTTGATGA+AGG | - | chr3_4:66733448-66733467 | None:intergenic | 25.0% |
| !!! | CCTAACTGTATTTTTTTTAG+AGG | - | chr3_4:66733469-66733488 | None:intergenic | 25.0% |
| !! | CCTCTAAAAAAAATACAGTT+AGG | + | chr3_4:66733466-66733485 | Msa0515500:intron | 25.0% |
| ! | CATATATGACTTATGATACA+TGG | + | chr3_4:66733691-66733710 | Msa0515500:intron | 25.0% |
| ! | AGCATACATTAAATCAGATT+AGG | + | chr3_4:66733781-66733800 | Msa0515500:intron | 25.0% |
| ! | CATGGATCAAAACAATAATT+AGG | - | chr3_4:66733885-66733904 | None:intergenic | 25.0% |
| !! | AAATCTCTCTTTTGTGAAAA+AGG | + | chr3_4:66733960-66733979 | Msa0515500:intron | 25.0% |
| ! | TGATTTACTTAAAAGAGTCA+AGG | + | chr3_4:66734127-66734146 | Msa0515500:CDS | 25.0% |
| ! | TCAAGTTTAAAAAAGAGAGA+GGG | - | chr3_4:66734191-66734210 | None:intergenic | 25.0% |
| !! | TTCAAGTTTAAAAAAGAGAG+AGG | - | chr3_4:66734192-66734211 | None:intergenic | 25.0% |
| !! | AATTAATTTTACTTCAAGGC+TGG | + | chr3_4:66734325-66734344 | Msa0515500:intron | 25.0% |
| !! | GATCCAAGAAAATAAAGTTT+TGG | - | chr3_4:66734716-66734735 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCCGTATTGGTT+TGG | - | chr3_4:66734803-66734822 | None:intergenic | 25.0% |
| ! | AACAACACATTTGATCAATT+GGG | - | chr3_4:66734858-66734877 | None:intergenic | 25.0% |
| ! | AAACAACACATTTGATCAAT+TGG | - | chr3_4:66734859-66734878 | None:intergenic | 25.0% |
| !! | TACAATTTAAGAGTACAAGA+TGG | + | chr3_4:66735208-66735227 | Msa0515500:intron | 25.0% |
| !! | ACAATTTAAGAGTACAAGAT+GGG | + | chr3_4:66735209-66735228 | Msa0515500:intron | 25.0% |
| !! | TTTTAGACCTCAAAAAAGTA+GGG | + | chr3_4:66735651-66735670 | Msa0515500:intron | 25.0% |
| !! | TGTGACTTTAAAGATAGTTA+CGG | + | chr3_4:66735696-66735715 | Msa0515500:intron | 25.0% |
| !! | CATCCAATTTTATTAGACAT+AGG | + | chr3_4:66735803-66735822 | Msa0515500:intron | 25.0% |
| ! | TCTCCTATGTCTAATAAAAT+TGG | - | chr3_4:66735809-66735828 | None:intergenic | 25.0% |
| !!! | TTGATTTAGAGTCTTTGTTT+TGG | - | chr3_4:66735890-66735909 | None:intergenic | 25.0% |
| ! | TAAATCAAGAATTGAGAAAG+AGG | + | chr3_4:66735902-66735921 | Msa0515500:intron | 25.0% |
| ! | AAATCAAGAATTGAGAAAGA+GGG | + | chr3_4:66735903-66735922 | Msa0515500:intron | 25.0% |
| ! | AACAATTTAAAGATTTGGGA+GGG | - | chr3_4:66736063-66736082 | None:intergenic | 25.0% |
| ! | CATGCAACAATTTAAAGATT+TGG | - | chr3_4:66736068-66736087 | None:intergenic | 25.0% |
| ! | TGGAATAAAAATCACTGAAA+TGG | - | chr3_4:66736107-66736126 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGTGGATCATAGT+TGG | - | chr3_4:66736186-66736205 | None:intergenic | 25.0% |
| ! | TAATTAATTGTAACTACCCA+AGG | - | chr3_4:66736281-66736300 | None:intergenic | 25.0% |
| ! | TAATTAATTGTAACTACCCA+AGG | - | chr3_4:66736281-66736300 | None:intergenic | 25.0% |
| ! | AGAAAGAGTAAGAAAGAAAA+AGG | + | chr3_4:66736549-66736568 | Msa0515500:intron | 25.0% |
| !! | AACAACTTAATTTGGCTAAT+AGG | + | chr3_4:66736955-66736974 | Msa0515500:intron | 25.0% |
| !!! | AAGAATTTTCAAGGGATTTT+AGG | - | chr3_4:66737058-66737077 | None:intergenic | 25.0% |
| ! | ACATTAATAGTATCAGCAAA+CGG | + | chr3_4:66737174-66737193 | Msa0515500:CDS | 25.0% |
| ! | AAAATCGTACAAATTAAGAG+TGG | + | chr3_4:66737270-66737289 | Msa0515500:three_prime_UTR | 25.0% |
| !! | CAAGATTTGTTTTTCCCATT+GGG | - | chr3_4:66732138-66732157 | None:intergenic | 30.0% |
| !! | TCAAGATTTGTTTTTCCCAT+TGG | - | chr3_4:66732139-66732158 | None:intergenic | 30.0% |
| ! | TAGATGATAGTGTCATTGAT+AGG | + | chr3_4:66732581-66732600 | Msa0515500:CDS | 30.0% |
| AGATTGTACGGAAAAAATGT+TGG | - | chr3_4:66732659-66732678 | None:intergenic | 30.0% | |
| TCCGTACAATCTCAATTATT+AGG | + | chr3_4:66732667-66732686 | Msa0515500:intron | 30.0% | |
| !! | GATAAGGCTTTGAAATATCT+TGG | + | chr3_4:66732821-66732840 | Msa0515500:CDS | 30.0% |
| !! | TATCTTGAAAACTTTTGAGG+AGG | - | chr3_4:66732973-66732992 | None:intergenic | 30.0% |
| ! | TCCTTTTTCCTTTCTTAGTT+AGG | + | chr3_4:66733224-66733243 | Msa0515500:intron | 30.0% |
| TCCTAACTAAGAAAGGAAAA+AGG | - | chr3_4:66733228-66733247 | None:intergenic | 30.0% | |
| TCTTAAGTCCTAACTAAGAA+AGG | - | chr3_4:66733235-66733254 | None:intergenic | 30.0% | |
| TTAGAAGAAAAAAACGCAGA+AGG | - | chr3_4:66733264-66733283 | None:intergenic | 30.0% | |
| TTAGTAGTATTATGCTGAGT+GGG | + | chr3_4:66733309-66733328 | Msa0515500:intron | 30.0% | |
| TAAACCAAAGCGACTTTATA+TGG | + | chr3_4:66733514-66733533 | Msa0515500:intron | 30.0% | |
| TTTGTGAAAAAGGATACGTA+CGG | + | chr3_4:66733970-66733989 | Msa0515500:intron | 30.0% | |
| AAAAAGAGAGAGGGAATTTA+GGG | - | chr3_4:66734182-66734201 | None:intergenic | 30.0% | |
| AAAAAAGAGAGAGGGAATTT+AGG | - | chr3_4:66734183-66734202 | None:intergenic | 30.0% | |
| !! | AGTTTAATTTTCGCATCTTG+TGG | + | chr3_4:66734386-66734405 | Msa0515500:intron | 30.0% |
| TAGAAGAGAAGTGGAAAATA+AGG | - | chr3_4:66734458-66734477 | None:intergenic | 30.0% | |
| ! | GAACTTTTGCATAACTTCTT+CGG | + | chr3_4:66734594-66734613 | Msa0515500:intron | 30.0% |
| !!! | CTGCCAAAACTTTATTTTCT+TGG | + | chr3_4:66734710-66734729 | Msa0515500:intron | 30.0% |
| TTATCATCACCAAACCAATA+CGG | + | chr3_4:66734791-66734810 | Msa0515500:intron | 30.0% | |
| ACAACACATTTGATCAATTG+GGG | - | chr3_4:66734857-66734876 | None:intergenic | 30.0% | |
| ! | TCTTGTTTGATTCGTGAAAA+TGG | - | chr3_4:66735052-66735071 | None:intergenic | 30.0% |
| TGCATATTCGAATGAAGTTA+TGG | - | chr3_4:66735102-66735121 | None:intergenic | 30.0% | |
| !! | TTTGTTTTCCAACAACTTAG+TGG | - | chr3_4:66735267-66735286 | None:intergenic | 30.0% |
| ! | CTTTTAGACCTCAAAAAAGT+AGG | + | chr3_4:66735650-66735669 | Msa0515500:intron | 30.0% |
| ! | ACATATAATTAGGTTGCGTT+TGG | - | chr3_4:66735677-66735696 | None:intergenic | 30.0% |
| !!! | TTTAGAGTCTTTGTTTTGGT+GGG | - | chr3_4:66735886-66735905 | None:intergenic | 30.0% |
| !!! | ATTTAGAGTCTTTGTTTTGG+TGG | - | chr3_4:66735887-66735906 | None:intergenic | 30.0% |
| ! | TTTTTCCTCAAAGAACTTGA+AGG | - | chr3_4:66736025-66736044 | None:intergenic | 30.0% |
| CAACAATTTAAAGATTTGGG+AGG | - | chr3_4:66736064-66736083 | None:intergenic | 30.0% | |
| ! | TAGATGTAATTTTGTCGACA+AGG | - | chr3_4:66736220-66736239 | None:intergenic | 30.0% |
| ATGATGAAACATGAGGTTAT+GGG | - | chr3_4:66736255-66736274 | None:intergenic | 30.0% | |
| TATGATGAAACATGAGGTTA+TGG | - | chr3_4:66736256-66736275 | None:intergenic | 30.0% | |
| ATGATGAAACATGAGGTTAT+GGG | - | chr3_4:66736255-66736274 | None:intergenic | 30.0% | |
| TATGATGAAACATGAGGTTA+TGG | - | chr3_4:66736256-66736275 | None:intergenic | 30.0% | |
| ACTTACATGCTAATTCTAGA+AGG | - | chr3_4:66736749-66736768 | None:intergenic | 30.0% | |
| ! | ATTGATGCAGCATTAGATTT+TGG | - | chr3_4:66736896-66736915 | None:intergenic | 30.0% |
| ! | CTCATCAGAAGAATTTTCAA+GGG | - | chr3_4:66737066-66737085 | None:intergenic | 30.0% |
| ACATAAATTTAAGTGGCTAG+TGG | - | chr3_4:66737409-66737428 | None:intergenic | 30.0% | |
| ! | AAAAAACTGTAGTGGAACAG+TGG | - | chr3_4:66732315-66732334 | None:intergenic | 35.0% |
| CATGAGAGAAAAAACTGTAG+TGG | - | chr3_4:66732323-66732342 | None:intergenic | 35.0% | |
| AAGCAAGCTCCATATCAATT+TGG | - | chr3_4:66732495-66732514 | None:intergenic | 35.0% | |
| ! | AATTGATATGGAGCTTGCTT+TGG | + | chr3_4:66732495-66732514 | Msa0515500:exon | 35.0% |
| !! | TGTTCTTGCTTCAAGTTTTG+TGG | - | chr3_4:66732544-66732563 | None:intergenic | 35.0% |
| CTTAGAGATTCTTCATGCAA+AGG | + | chr3_4:66732622-66732641 | Msa0515500:CDS | 35.0% | |
| TTCTTCATGCAAAGGTAGTT+AGG | + | chr3_4:66732630-66732649 | Msa0515500:intron | 35.0% | |
| TGTTAAAACAGTTACCTGTG+TGG | + | chr3_4:66732790-66732809 | Msa0515500:intron | 35.0% | |
| AGTCAACACGATAAAATGGA+TGG | - | chr3_4:66733200-66733219 | None:intergenic | 35.0% | |
| GCTTAGTCAACACGATAAAA+TGG | - | chr3_4:66733204-66733223 | None:intergenic | 35.0% | |
| GTTAGTAGTATTATGCTGAG+TGG | + | chr3_4:66733308-66733327 | Msa0515500:intron | 35.0% | |
| TAGTAGTATTATGCTGAGTG+GGG | + | chr3_4:66733310-66733329 | Msa0515500:intron | 35.0% | |
| AACTCCATATAAAGTCGCTT+TGG | - | chr3_4:66733521-66733540 | None:intergenic | 35.0% | |
| CAAGAATATAGTGTCTGCTA+TGG | + | chr3_4:66733914-66733933 | Msa0515500:intron | 35.0% | |
| ! | ATCATGTGCACTATTTTGCA+GGG | + | chr3_4:66734050-66734069 | Msa0515500:intron | 35.0% |
| AGAGAAGTGGAAAATAAGGA+GGG | - | chr3_4:66734454-66734473 | None:intergenic | 35.0% | |
| AAGAGAAGTGGAAAATAAGG+AGG | - | chr3_4:66734455-66734474 | None:intergenic | 35.0% | |
| ! | TTCTACTTCTAAGGAGAAGT+AGG | + | chr3_4:66734473-66734492 | Msa0515500:intron | 35.0% |
| ! | TCTACTTCTAAGGAGAAGTA+GGG | + | chr3_4:66734474-66734493 | Msa0515500:intron | 35.0% |
| TAAATATCTGAGCAATCGCA+AGG | - | chr3_4:66734774-66734793 | None:intergenic | 35.0% | |
| CAAATAAGCCACTAAGTTGT+TGG | + | chr3_4:66735256-66735275 | Msa0515500:intron | 35.0% | |
| TCATCAAAGTAACCTCTTAG+AGG | - | chr3_4:66735984-66736003 | None:intergenic | 35.0% | |
| AAGGTGTATGATGAAACATG+AGG | - | chr3_4:66736262-66736281 | None:intergenic | 35.0% | |
| TCATGTTTCATCATACACCT+TGG | + | chr3_4:66736261-66736280 | Msa0515500:intron | 35.0% | |
| CATGTTTCATCATACACCTT+GGG | + | chr3_4:66736262-66736281 | Msa0515500:intron | 35.0% | |
| AAGGTGTATGATGAAACATG+AGG | - | chr3_4:66736262-66736281 | None:intergenic | 35.0% | |
| TCATGTTTCATCATACACCT+TGG | + | chr3_4:66736261-66736280 | Msa0515500:intron | 35.0% | |
| CATGTTTCATCATACACCTT+GGG | + | chr3_4:66736262-66736281 | Msa0515500:intron | 35.0% | |
| CTCTTTCTACCCAAAATGTT+AGG | - | chr3_4:66736537-66736556 | None:intergenic | 35.0% | |
| TAATTTGGCTAATAGGTGCT+TGG | + | chr3_4:66736962-66736981 | Msa0515500:intron | 35.0% | |
| TGCAAATCTGATAACTGAAG+AGG | - | chr3_4:66737017-66737036 | None:intergenic | 35.0% | |
| !! | TCAAGGGATTTTAGGAAGTA+TGG | - | chr3_4:66737050-66737069 | None:intergenic | 35.0% |
| ! | GCTCATCAGAAGAATTTTCA+AGG | - | chr3_4:66737067-66737086 | None:intergenic | 35.0% |
| TAATAGTATCAGCAAACGGA+AGG | + | chr3_4:66737178-66737197 | Msa0515500:CDS | 35.0% | |
| AGATCAATGCCCAAAATGAA+AGG | + | chr3_4:66737224-66737243 | Msa0515500:CDS | 35.0% | |
| GATCAATGCCCAAAATGAAA+GGG | + | chr3_4:66737225-66737244 | Msa0515500:CDS | 35.0% | |
| TGCAATATCTAGACGACAAA+GGG | - | chr3_4:66737449-66737468 | None:intergenic | 35.0% | |
| TTGCAATATCTAGACGACAA+AGG | - | chr3_4:66737450-66737469 | None:intergenic | 35.0% | |
| TCTCTCATTCCCCTTTCAAT+TGG | - | chr3_4:66732189-66732208 | None:intergenic | 40.0% | |
| AAAGAGTAGTTGTACCAACG+TGG | + | chr3_4:66732224-66732243 | Msa0515500:five_prime_UTR | 40.0% | |
| GGAAGATGATGAATGAGAGT+GGG | - | chr3_4:66732403-66732422 | None:intergenic | 40.0% | |
| TATAGAGAGAGAGAGAGAGA+GGG | - | chr3_4:66732425-66732444 | None:intergenic | 40.0% | |
| GCAAGAACACTTTCATGTGT+TGG | + | chr3_4:66732555-66732574 | Msa0515500:CDS | 40.0% | |
| ! | TTGATAGGATGCTTCTAGAG+AGG | + | chr3_4:66732596-66732615 | Msa0515500:CDS | 40.0% |
| ATTACCTCTTGTAGCTGCAA+TGG | - | chr3_4:66732929-66732948 | None:intergenic | 40.0% | |
| !! | CTTGAAAACTTTTGAGGAGG+AGG | - | chr3_4:66732970-66732989 | None:intergenic | 40.0% |
| TGAGTGGGGATATTGAACTT+TGG | + | chr3_4:66733324-66733343 | Msa0515500:intron | 40.0% | |
| ATATTCTTGCGAGGAGATCA+TGG | - | chr3_4:66733903-66733922 | None:intergenic | 40.0% | |
| ! | CATCATGTGCACTATTTTGC+AGG | + | chr3_4:66734049-66734068 | Msa0515500:intron | 40.0% |
| ATGACAGATTATTGCATGCC+TGG | + | chr3_4:66734092-66734111 | Msa0515500:CDS | 40.0% | |
| TGACAGATTATTGCATGCCT+GGG | + | chr3_4:66734093-66734112 | Msa0515500:CDS | 40.0% | |
| AGGGAATTTAGGGAAGATGT+CGG | - | chr3_4:66734172-66734191 | None:intergenic | 40.0% | |
| AGTTCACTAGCACTTTGCAA+AGG | + | chr3_4:66734294-66734313 | Msa0515500:intron | 40.0% | |
| CCTTAGAAGTAGAAGAGAAG+TGG | - | chr3_4:66734467-66734486 | None:intergenic | 40.0% | |
| CCACTTCTCTTCTACTTCTA+AGG | + | chr3_4:66734464-66734483 | Msa0515500:intron | 40.0% | |
| TGGTTTATGTGGGAATCGAT+GGG | - | chr3_4:66734639-66734658 | None:intergenic | 40.0% | |
| ATGGTTTATGTGGGAATCGA+TGG | - | chr3_4:66734640-66734659 | None:intergenic | 40.0% | |
| GCAATGAATATGCAACGAAC+AGG | - | chr3_4:66734738-66734757 | None:intergenic | 40.0% | |
| AACACATGAGACCAAATCCT+TGG | + | chr3_4:66735142-66735161 | Msa0515500:intron | 40.0% | |
| TTTCTTCGGGCATATATCCA+AGG | - | chr3_4:66735162-66735181 | None:intergenic | 40.0% | |
| AAAGAAAACTGCTTACGAGC+AGG | + | chr3_4:66735764-66735783 | Msa0515500:intron | 40.0% | |
| TCAAAGTAACCTCTTAGAGG+TGG | - | chr3_4:66735981-66736000 | None:intergenic | 40.0% | |
| ! | TTCCACCTTCAAGTTCTTTG+AGG | + | chr3_4:66736017-66736036 | Msa0515500:intron | 40.0% |
| TTCCTCAAAGAACTTGAAGG+TGG | - | chr3_4:66736022-66736041 | None:intergenic | 40.0% | |
| TTGGAAAGATGTTCCAGTTG+TGG | + | chr3_4:66736703-66736722 | Msa0515500:CDS | 40.0% | |
| TCTGATGACATAACCACAAC+TGG | - | chr3_4:66736719-66736738 | None:intergenic | 40.0% | |
| CTAATAGGTGCTTGGAAGAA+GGG | + | chr3_4:66736970-66736989 | Msa0515500:intron | 40.0% | |
| TAATAGGTGCTTGGAAGAAG+GGG | + | chr3_4:66736971-66736990 | Msa0515500:intron | 40.0% | |
| !!! | ATTTTGGGCATTGATCTCTC+TGG | - | chr3_4:66737221-66737240 | None:intergenic | 40.0% |
| AATGCCCAAAATGAAAGGGT+TGG | + | chr3_4:66737229-66737248 | Msa0515500:CDS | 40.0% | |
| ! | AACGTGGTGGAGAGAATCTA+GGG | + | chr3_4:66732240-66732259 | Msa0515500:five_prime_UTR | 45.0% |
| ! | ACTGTAGTGGAACAGTGGTA+TGG | - | chr3_4:66732310-66732329 | None:intergenic | 45.0% |
| GAATGAGAGTGGGAAAAGAG+AGG | - | chr3_4:66732393-66732412 | None:intergenic | 45.0% | |
| GGGAAGATGATGAATGAGAG+TGG | - | chr3_4:66732404-66732423 | None:intergenic | 45.0% | |
| ATAGAGAGAGAGAGAGAGAG+GGG | - | chr3_4:66732424-66732443 | None:intergenic | 45.0% | |
| GTATAGAGAGAGAGAGAGAG+AGG | - | chr3_4:66732426-66732445 | None:intergenic | 45.0% | |
| TGCAATGGTTGTTGAAGAGG+AGG | - | chr3_4:66732914-66732933 | None:intergenic | 45.0% | |
| AGCTGCAATGGTTGTTGAAG+AGG | - | chr3_4:66732917-66732936 | None:intergenic | 45.0% | |
| ACAACCATTGCAGCTACAAG+AGG | + | chr3_4:66732922-66732941 | Msa0515500:CDS | 45.0% | |
| GGAGGATCTGAGAGAGAAAT+TGG | - | chr3_4:66733545-66733564 | None:intergenic | 45.0% | |
| CTCAGATCCTCCATTCATCT+AGG | + | chr3_4:66733553-66733572 | Msa0515500:intron | 45.0% | |
| GTACGTACAGTGCAGTGAAA+AGG | - | chr3_4:66733861-66733880 | None:intergenic | 45.0% | |
| GCAGACACTATATTCTTGCG+AGG | - | chr3_4:66733912-66733931 | None:intergenic | 45.0% | |
| AAATCATAGCCACTCATCCC+AGG | - | chr3_4:66734113-66734132 | None:intergenic | 45.0% | |
| GGAATTTAGGGAAGATGTCG+GGG | - | chr3_4:66734170-66734189 | None:intergenic | 45.0% | |
| GGGAATTTAGGGAAGATGTC+GGG | - | chr3_4:66734171-66734190 | None:intergenic | 45.0% | |
| ! | GTCACGACTAAGAGCATGTT+TGG | + | chr3_4:66734428-66734447 | Msa0515500:intron | 45.0% |
| AACTTCTTCGGAGCTACTGT+TGG | + | chr3_4:66734606-66734625 | Msa0515500:intron | 45.0% | |
| ACTTCTTCGGAGCTACTGTT+GGG | + | chr3_4:66734607-66734626 | Msa0515500:intron | 45.0% | |
| TTTATGTGGGAATCGATGGG+TGG | - | chr3_4:66734636-66734655 | None:intergenic | 45.0% | |
| CGGGCATATATCCAAGGATT+TGG | - | chr3_4:66735156-66735175 | None:intergenic | 45.0% | |
| !!! | CGTTTGGCCCTACTTTTTTG+AGG | - | chr3_4:66735661-66735680 | None:intergenic | 45.0% |
| AGCTAGAAACCACCTCTAAG+AGG | + | chr3_4:66735969-66735988 | Msa0515500:intron | 45.0% | |
| GAAGGTGGAAGAGATTGTAG+AGG | - | chr3_4:66736007-66736026 | None:intergenic | 45.0% | |
| GCTAATAGGTGCTTGGAAGA+AGG | + | chr3_4:66736969-66736988 | Msa0515500:intron | 45.0% | |
| ! | ACCGCCAACCCTTTCATTTT+GGG | - | chr3_4:66737236-66737255 | None:intergenic | 45.0% |
| !!! | TTTATTTTATATATTTTGAA+TGG | + | chr3_4:66735720-66735739 | Msa0515500:intron | 5.0% |
| GAGTAGTTGTACCAACGTGG+TGG | + | chr3_4:66732227-66732246 | Msa0515500:five_prime_UTR | 50.0% | |
| CTAGATTCTCTCCACCACGT+TGG | - | chr3_4:66732241-66732260 | None:intergenic | 50.0% | |
| ! | CAACGTGGTGGAGAGAATCT+AGG | + | chr3_4:66732239-66732258 | Msa0515500:five_prime_UTR | 50.0% |
| TGAGAGTGGGAAAAGAGAGG+TGG | - | chr3_4:66732390-66732409 | None:intergenic | 50.0% | |
| ACAGTTACCTGTGTGGACTC+TGG | + | chr3_4:66732797-66732816 | Msa0515500:intron | 50.0% | |
| CTTATCTCCAGAGTCCACAC+AGG | - | chr3_4:66732807-66732826 | None:intergenic | 50.0% | |
| ! | CTGTGTGGACTCTGGAGATA+AGG | + | chr3_4:66732805-66732824 | Msa0515500:CDS | 50.0% |
| TCCTCCATTCATCTAGGTCG+CGG | + | chr3_4:66733559-66733578 | Msa0515500:intron | 50.0% | |
| TATTGCATGCCTGGGATGAG+TGG | + | chr3_4:66734101-66734120 | Msa0515500:CDS | 50.0% | |
| ACACTGCTTACTGCACTGCA+GGG | + | chr3_4:66736674-66736693 | Msa0515500:intron | 50.0% | |
| TTCCACTACCACCACAGACT+CGG | + | chr3_4:66737103-66737122 | Msa0515500:CDS | 50.0% | |
| ! | ATTGATCTCTCTGGAGGCTC+AGG | - | chr3_4:66737212-66737231 | None:intergenic | 50.0% |
| !! | TTGGGCATTGATCTCTCTGG+AGG | - | chr3_4:66737218-66737237 | None:intergenic | 50.0% |
| GCCCAAAATGAAAGGGTTGG+CGG | + | chr3_4:66737232-66737251 | Msa0515500:CDS | 50.0% | |
| ! | CACCGCCAACCCTTTCATTT+TGG | - | chr3_4:66737237-66737256 | None:intergenic | 50.0% |
| ! | CAAAATGAAAGGGTTGGCGG+TGG | + | chr3_4:66737235-66737254 | Msa0515500:CDS | 50.0% |
| TCCGCGACCTAGATGAATGG+AGG | - | chr3_4:66733563-66733582 | None:intergenic | 55.0% | |
| GCATCCGCGACCTAGATGAA+TGG | - | chr3_4:66733566-66733585 | None:intergenic | 55.0% | |
| GACACTGCTTACTGCACTGC+AGG | + | chr3_4:66736673-66736692 | Msa0515500:intron | 55.0% | |
| CTGCACTGCAGGGATCTTCT+TGG | + | chr3_4:66736684-66736703 | Msa0515500:intron | 55.0% | |
| ! | AATGAAAGGGTTGGCGGTGG+TGG | + | chr3_4:66737238-66737257 | Msa0515500:CDS | 55.0% |
| GTCCGAGTCTGTGGTGGTAG+TGG | - | chr3_4:66737108-66737127 | None:intergenic | 60.0% | |
| GTTGTCGTCGTCCGAGTCTG+TGG | - | chr3_4:66737117-66737136 | None:intergenic | 60.0% | |
| ! | CTCTGGAGGCTCAGGAGACA+TGG | - | chr3_4:66737204-66737223 | None:intergenic | 60.0% |
| GTCGTCGTCCGAGTCTGTGG+TGG | - | chr3_4:66737114-66737133 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 66732130 | 66737485 | 66732130 | ID=Msa0515500;Name=Msa0515500 |
| chr3_4 | mRNA | 66732130 | 66737485 | 66732130 | ID=Msa0515500-mRNA-1;Parent=Msa0515500;Name=Msa0515500-mRNA-1;_AED=0.07;_eAED=0.07;_QI=372|1|1|1|1|1|5|220|239 |
| chr3_4 | exon | 66732130 | 66732643 | 66732130 | ID=Msa0515500-mRNA-1:exon:17213;Parent=Msa0515500-mRNA-1 |
| chr3_4 | exon | 66732801 | 66732943 | 66732801 | ID=Msa0515500-mRNA-1:exon:17214;Parent=Msa0515500-mRNA-1 |
| chr3_4 | exon | 66734071 | 66734148 | 66734071 | ID=Msa0515500-mRNA-1:exon:17215;Parent=Msa0515500-mRNA-1 |
| chr3_4 | exon | 66736695 | 66736762 | 66736695 | ID=Msa0515500-mRNA-1:exon:17216;Parent=Msa0515500-mRNA-1 |
| chr3_4 | exon | 66736977 | 66737485 | 66736977 | ID=Msa0515500-mRNA-1:exon:17217;Parent=Msa0515500-mRNA-1 |
| chr3_4 | five_prime_UTR | 66732130 | 66732501 | 66732130 | ID=Msa0515500-mRNA-1:five_prime_utr;Parent=Msa0515500-mRNA-1 |
| chr3_4 | CDS | 66732502 | 66732643 | 66732502 | ID=Msa0515500-mRNA-1:cds;Parent=Msa0515500-mRNA-1 |
| chr3_4 | CDS | 66732801 | 66732943 | 66732801 | ID=Msa0515500-mRNA-1:cds;Parent=Msa0515500-mRNA-1 |
| chr3_4 | CDS | 66734071 | 66734148 | 66734071 | ID=Msa0515500-mRNA-1:cds;Parent=Msa0515500-mRNA-1 |
| chr3_4 | CDS | 66736695 | 66736762 | 66736695 | ID=Msa0515500-mRNA-1:cds;Parent=Msa0515500-mRNA-1 |
| chr3_4 | CDS | 66736977 | 66737265 | 66736977 | ID=Msa0515500-mRNA-1:cds;Parent=Msa0515500-mRNA-1 |
| chr3_4 | three_prime_UTR | 66737266 | 66737485 | 66737266 | ID=Msa0515500-mRNA-1:three_prime_utr;Parent=Msa0515500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
