Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521810 | XP_013462014.1 | 91.877 | 357 | 27 | 1 | 1 | 355 | 1 | 357 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521810 | sp|Q07469|BSPA_POPDE | 29.568 | 301 | 180 | 8 | 49 | 345 | 29 | 301 | 1.30e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521810 | A0A072V1Y8 | 91.877 | 357 | 27 | 1 | 1 | 355 | 1 | 357 | 0.0 | 678 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383540 | Msa0521810 | 0.908335 | 1.914108e-81 | -8.615850e-47 |
| Msa0387090 | Msa0521810 | 0.860346 | 2.202152e-63 | -8.615850e-47 |
| Msa0521810 | Msa1348780 | 0.820422 | 6.919025e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521810 | MtrunA17_Chr3g0140051 | 91.877 | 357 | 27 | 1 | 1 | 355 | 1 | 357 | 0.0 | 678 |
| Msa0521810 | MtrunA17_Chr3g0140061 | 92.068 | 353 | 26 | 1 | 1 | 351 | 1 | 353 | 0.0 | 672 |
| Msa0521810 | MtrunA17_Chr6g0486081 | 52.866 | 314 | 141 | 3 | 37 | 348 | 28 | 336 | 4.85e-124 | 360 |
| Msa0521810 | MtrunA17_Chr6g0486101 | 51.911 | 314 | 139 | 3 | 37 | 348 | 29 | 332 | 4.02e-119 | 347 |
| Msa0521810 | MtrunA17_Chr6g0486091 | 49.682 | 314 | 146 | 3 | 37 | 348 | 30 | 333 | 5.31e-113 | 332 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521810 | AT4G28940.1 | 58.125 | 320 | 125 | 3 | 37 | 354 | 32 | 344 | 3.56e-138 | 397 |
| Msa0521810 | AT4G28940.2 | 59.459 | 259 | 98 | 2 | 96 | 354 | 1 | 252 | 4.21e-112 | 327 |
| Msa0521810 | AT4G24340.1 | 35.549 | 346 | 196 | 6 | 11 | 348 | 9 | 335 | 2.93e-67 | 215 |
| Msa0521810 | AT4G24350.1 | 35.294 | 340 | 202 | 6 | 11 | 348 | 10 | 333 | 5.04e-66 | 212 |
| Msa0521810 | AT4G24350.2 | 33.446 | 296 | 181 | 5 | 11 | 304 | 10 | 291 | 1.06e-52 | 176 |
| Msa0521810 | AT4G24350.3 | 37.395 | 238 | 133 | 5 | 111 | 348 | 1 | 222 | 5.79e-49 | 164 |
| Msa0521810 | AT4G24350.4 | 35.468 | 203 | 117 | 4 | 102 | 304 | 9 | 197 | 3.22e-38 | 135 |
Find 100 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAAGAGGGTCCTTATT+TGG | 0.081653 | 3_4:+74760809 | Msa0521810:CDS |
| CACAACTCACGAATGCATTT+TGG | 0.147904 | 3_4:-74760749 | None:intergenic |
| ATGTTGCTATTCCACATTAT+TGG | 0.227186 | 3_4:+74761452 | Msa0521810:CDS |
| AATATAATTAAATATTAAAA+AGG | 0.230454 | 3_4:+74764784 | Msa0521810:three_prime_UTR |
| GTAAACAACAACTTTGTTCT+TGG | 0.232547 | 3_4:+74764668 | Msa0521810:three_prime_UTR |
| TTGTTCTTGGTTTGGTTGTC+TGG | 0.248126 | 3_4:+74764681 | Msa0521810:three_prime_UTR |
| CTTCCTATATTGCGTGTGTC+TGG | 0.268657 | 3_4:+74760649 | Msa0521810:five_prime_UTR |
| GGATTCCCTTCATTGCTATC+AGG | 0.272090 | 3_4:+74764451 | Msa0521810:CDS |
| AACAAAGGCAACATGCTCTT+TGG | 0.272171 | 3_4:+74763943 | Msa0521810:CDS |
| TGTTGCTATTCCACATTATT+GGG | 0.272480 | 3_4:+74761453 | Msa0521810:CDS |
| GGTATGATTAAACCCAAATA+AGG | 0.283272 | 3_4:-74760822 | None:intergenic |
| GGGTTAAGTTCAAAAGAATT+TGG | 0.307615 | 3_4:-74760843 | None:intergenic |
| AACAAAGAGGGTCCTTATTT+GGG | 0.323637 | 3_4:+74760810 | Msa0521810:CDS |
| TATCAGGGCTCTTTCTGATT+TGG | 0.324485 | 3_4:+74764467 | Msa0521810:CDS |
| CTCATTTGGCACTTTGGAGC+TGG | 0.328354 | 3_4:+74761476 | Msa0521810:CDS |
| TCCACATTATTGGGCTCATT+TGG | 0.331452 | 3_4:+74761462 | Msa0521810:CDS |
| CAACAACTTTGTTCTTGGTT+TGG | 0.342838 | 3_4:+74764673 | Msa0521810:three_prime_UTR |
| AGAGCATGTTGCCTTTGTTC+AGG | 0.348607 | 3_4:-74763939 | None:intergenic |
| ACAACCAACTCAACAATCTA+TGG | 0.372643 | 3_4:+74763880 | Msa0521810:CDS |
| GTTGTTCATTACGGGATTGC+TGG | 0.372697 | 3_4:+74761400 | Msa0521810:CDS |
| TAGATGGAGTTGTTCATTAC+GGG | 0.375885 | 3_4:+74761392 | Msa0521810:CDS |
| CCAACGGGGAAAATCTCTTC+TGG | 0.376793 | 3_4:-74763909 | None:intergenic |
| GCATATCATTGCACTAATTA+CGG | 0.380260 | 3_4:-74764637 | None:intergenic |
| CCCGTCATGACTAGTATAAC+TGG | 0.382128 | 3_4:-74761210 | None:intergenic |
| AGGTAGTACTTGGAATCAAC+GGG | 0.405005 | 3_4:-74763969 | None:intergenic |
| ATTGGGCTCATTTGGCACTT+TGG | 0.416383 | 3_4:+74761470 | Msa0521810:CDS |
| CTGTCTACAAGCACAACCTT+TGG | 0.418437 | 3_4:-74764306 | None:intergenic |
| TGTTCAGGAATGCCACCAAC+GGG | 0.418889 | 3_4:-74763924 | None:intergenic |
| AGGGCTCTTTCTGATTTGGC+TGG | 0.421164 | 3_4:+74764471 | Msa0521810:CDS |
| GTAGATGGAGTTGTTCATTA+CGG | 0.424060 | 3_4:+74761391 | Msa0521810:CDS |
| ACAAAGGCAACATGCTCTTT+GGG | 0.425980 | 3_4:+74763944 | Msa0521810:CDS |
| ATTGTATATGTGCAGAGGTA+TGG | 0.431241 | 3_4:+74763744 | Msa0521810:intron |
| GAAGGAAGGAGATTTCGTTT+TGG | 0.431427 | 3_4:+74761171 | Msa0521810:intron |
| CTTTCTGATTTGGCTGGCGG+CGG | 0.432701 | 3_4:+74764477 | Msa0521810:CDS |
| CTCTTATATGCTTGCAACAA+AGG | 0.444049 | 3_4:+74764430 | Msa0521810:CDS |
| TTCCTATATTGCGTGTGTCT+GGG | 0.450123 | 3_4:+74760650 | Msa0521810:five_prime_UTR |
| CACCCAGACACACGCAATAT+AGG | 0.451282 | 3_4:-74760652 | None:intergenic |
| TTTGGCAATAAGGTAGTACT+TGG | 0.451990 | 3_4:-74763979 | None:intergenic |
| GCAAACCCTTCCTTGCATAT+CGG | 0.458109 | 3_4:+74761427 | Msa0521810:CDS |
| TCTAAGGGTAACGTGTCATC+AGG | 0.462269 | 3_4:-74763774 | None:intergenic |
| GTTAAACTTATTGTAGATGA+AGG | 0.469473 | 3_4:-74764373 | None:intergenic |
| AACCCTCTTCTTCAAAATCC+AGG | 0.472844 | 3_4:+74760861 | Msa0521810:CDS |
| TTTGGCACTTTGGAGCTGGC+AGG | 0.483139 | 3_4:+74761480 | Msa0521810:CDS |
| GGTACCATAGATTGTTGAGT+TGG | 0.488750 | 3_4:-74763884 | None:intergenic |
| GACCACAGCAACAGAGTTAG+TGG | 0.492352 | 3_4:-74764544 | None:intergenic |
| GGAGATTACACAAGGGAAGT+AGG | 0.493178 | 3_4:+74763804 | Msa0521810:CDS |
| TTGTATATGTGCAGAGGTAT+GGG | 0.494546 | 3_4:+74763745 | Msa0521810:intron |
| AAGAGCCCTGATAGCAATGA+AGG | 0.499791 | 3_4:-74764457 | None:intergenic |
| TTTACATCAAACTTAAGTGC+TGG | 0.499968 | 3_4:+74763846 | Msa0521810:CDS |
| TGTTTCTTGTGGCATTTATG+TGG | 0.501987 | 3_4:+74760718 | Msa0521810:CDS |
| TATAACTGGTTTGTCGCCAA+TGG | 0.510741 | 3_4:-74761196 | None:intergenic |
| AGTCTTGTTCATGTTTCTTG+TGG | 0.512605 | 3_4:+74760707 | Msa0521810:CDS |
| AAGGTAGTACTTGGAATCAA+CGG | 0.527662 | 3_4:-74763970 | None:intergenic |
| GGCTGATACCTTCTCACCAC+TGG | 0.530809 | 3_4:+74764518 | Msa0521810:CDS |
| GAGATTACACAAGGGAAGTA+GGG | 0.535301 | 3_4:+74763805 | Msa0521810:CDS |
| GATGCACTTTCCATGTCCAC+TGG | 0.544627 | 3_4:-74764402 | None:intergenic |
| GTAGACAGAGGAACAAGTGC+AGG | 0.547219 | 3_4:+74764321 | Msa0521810:CDS |
| GATTCCCTTCATTGCTATCA+GGG | 0.551884 | 3_4:+74764452 | Msa0521810:CDS |
| TTGTCACTAGCAGTATAGCC+TGG | 0.553691 | 3_4:-74760879 | None:intergenic |
| TAACGTGAGTCCAGTGGACA+TGG | 0.555563 | 3_4:+74764392 | Msa0521810:CDS |
| ACCAGTTATACTAGTCATGA+CGG | 0.559335 | 3_4:+74761209 | Msa0521810:CDS |
| TTGTTCAGGAATGCCACCAA+CGG | 0.573621 | 3_4:-74763925 | None:intergenic |
| GCCAAATGAGCCCAATAATG+TGG | 0.579248 | 3_4:-74761463 | None:intergenic |
| ACATCTCCGATATGCAAGGA+AGG | 0.579860 | 3_4:-74761433 | None:intergenic |
| TGAGAAGGTATCAGCCTCGT+TGG | 0.580666 | 3_4:-74764511 | None:intergenic |
| AGTGGCGGCCAGTGGTGAGA+AGG | 0.585903 | 3_4:-74764526 | None:intergenic |
| CGCCACTAACTCTGTTGCTG+TGG | 0.586135 | 3_4:+74764542 | Msa0521810:CDS |
| GGACATGGAAAGTGCATCAG+TGG | 0.586546 | 3_4:+74764407 | Msa0521810:CDS |
| AATGAAGGACCCAAATAGGT+TGG | 0.590279 | 3_4:-74760604 | None:intergenic |
| CGGGGAAAATCTCTTCTGGT+TGG | 0.595557 | 3_4:-74763905 | None:intergenic |
| AATTGCTAAAATCAACAAAG+AGG | 0.598241 | 3_4:+74760797 | Msa0521810:CDS |
| TCATAACATAGTTCACCACT+TGG | 0.603986 | 3_4:-74764601 | None:intergenic |
| CTTTAACACCAAAATTACAA+AGG | 0.606600 | 3_4:+74760772 | Msa0521810:CDS |
| GCTCTTTCTGATTTGGCTGG+CGG | 0.606832 | 3_4:+74764474 | Msa0521810:CDS |
| ATTGCTAAAATCAACAAAGA+GGG | 0.607365 | 3_4:+74760798 | Msa0521810:CDS |
| CCAGTTATACTAGTCATGAC+GGG | 0.608599 | 3_4:+74761210 | Msa0521810:CDS |
| AGCAACATCTCCGATATGCA+AGG | 0.618530 | 3_4:-74761437 | None:intergenic |
| TATAGGAAGACAACAACTGT+GGG | 0.626859 | 3_4:-74760635 | None:intergenic |
| TTTGGCTGGCGGCGGCACTG+CGG | 0.630853 | 3_4:+74764485 | Msa0521810:CDS |
| ATGTGCAGAGGTATGGGCAA+GGG | 0.632644 | 3_4:+74763751 | Msa0521810:intron |
| ACATAGTTCACCACTTGGAG+TGG | 0.638822 | 3_4:-74764596 | None:intergenic |
| ACAGAGTTAGTGGCGGCCAG+TGG | 0.641871 | 3_4:-74764534 | None:intergenic |
| TATGTGCAGAGGTATGGGCA+AGG | 0.643104 | 3_4:+74763750 | Msa0521810:intron |
| ACGTTACCCTTAGAAAACAA+TGG | 0.644025 | 3_4:+74763783 | Msa0521810:CDS |
| ATGCTTGACAACGACACCAA+AGG | 0.644624 | 3_4:+74764290 | Msa0521810:CDS |
| AGAGCCCTGATAGCAATGAA+GGG | 0.645404 | 3_4:-74764456 | None:intergenic |
| TTGGTGGCATTCCTGAACAA+AGG | 0.647085 | 3_4:+74763928 | Msa0521810:CDS |
| TGTCATCACACCACTCCAAG+TGG | 0.651383 | 3_4:+74764586 | Msa0521810:CDS |
| CATCTCCGATATGCAAGGAA+GGG | 0.651532 | 3_4:-74761432 | None:intergenic |
| TAAGTTTAACGTGAGTCCAG+TGG | 0.659074 | 3_4:+74764386 | Msa0521810:CDS |
| AGTCATGACGGGATTGAGTG+TGG | 0.668616 | 3_4:+74761221 | Msa0521810:CDS |
| AAAACAATGGAGATTACACA+AGG | 0.670651 | 3_4:+74763796 | Msa0521810:CDS |
| TAGACAGAGGAACAAGTGCA+GGG | 0.675462 | 3_4:+74764322 | Msa0521810:CDS |
| CGGCACTGCGGAGTCCAACG+AGG | 0.679929 | 3_4:+74764497 | Msa0521810:CDS |
| CACAGCAACAGAGTTAGTGG+CGG | 0.702748 | 3_4:-74764541 | None:intergenic |
| AAGGTTGTGCTTGTAGACAG+AGG | 0.704702 | 3_4:+74764309 | Msa0521810:CDS |
| AAACAATGGAGATTACACAA+GGG | 0.709853 | 3_4:+74763797 | Msa0521810:CDS |
| ATATAGGAAGACAACAACTG+TGG | 0.713840 | 3_4:-74760636 | None:intergenic |
| GTTCAGGAATGCCACCAACG+GGG | 0.730088 | 3_4:-74763923 | None:intergenic |
| GGTAGTACTTGGAATCAACG+GGG | 0.836087 | 3_4:-74763968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTAAATATTAAAA+AGG | + | chr3_4:74764784-74764803 | Msa0521810:three_prime_UTR | 0.0% |
| !!! | ATATGATATTATGATTTTTT+TGG | - | chr3_4:74761595-74761614 | None:intergenic | 10.0% |
| !!! | TAAAAACACAATAAATTTTA+AGG | + | chr3_4:74762076-74762095 | Msa0521810:intron | 10.0% |
| !!! | TAAAAACACAATAAATTTTA+AGG | + | chr3_4:74762076-74762095 | Msa0521810:intron | 10.0% |
| !!! | ATTTTAGATATTACTTAAAA+AGG | + | chr3_4:74764757-74764776 | Msa0521810:three_prime_UTR | 10.0% |
| !!! | AATTTTCCTCTTTTTTTTTA+TGG | + | chr3_4:74761140-74761159 | Msa0521810:intron | 15.0% |
| !! | ATAAATAATAATTATTGTGG+TGG | - | chr3_4:74761515-74761534 | None:intergenic | 15.0% |
| !!! | TTGAATCAAAATTTCTTTTA+TGG | + | chr3_4:74761627-74761646 | Msa0521810:intron | 15.0% |
| !! | GTAGTTGTTAATTAATTTAA+AGG | - | chr3_4:74762705-74762724 | None:intergenic | 15.0% |
| !!! | TTAACAACTACATATTTTTT+TGG | + | chr3_4:74762714-74762733 | Msa0521810:intron | 15.0% |
| !!! | TTTTCTAAGTTAAAAATAGA+CGG | - | chr3_4:74763073-74763092 | None:intergenic | 15.0% |
| !!! | AATTGTTGACTTTTTTTATT+AGG | + | chr3_4:74763285-74763304 | Msa0521810:intron | 15.0% |
| !!! | TACATTTATATATTTTTGAG+AGG | + | chr3_4:74764108-74764127 | Msa0521810:intron | 15.0% |
| !!! | TGACTTTAAAAAAAAAAGAA+GGG | + | chr3_4:74764734-74764753 | Msa0521810:three_prime_UTR | 15.0% |
| !!! | CTTTTATAGAGAATAAAATG+AGG | - | chr3_4:74760584-74760603 | None:intergenic | 20.0% |
| !! | TCACATGTATAATTTAATCT+TGG | - | chr3_4:74760955-74760974 | None:intergenic | 20.0% |
| !! | TGAAATTAATTAACTTTGCA+AGG | + | chr3_4:74761078-74761097 | Msa0521810:intron | 20.0% |
| !! | TATTAGCCATAAAAAAAAAG+AGG | - | chr3_4:74761149-74761168 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAAAGCATGA+AGG | - | chr3_4:74761765-74761784 | None:intergenic | 20.0% |
| !!! | ATGCTTTGTTTTTTTTTTGA+AGG | + | chr3_4:74761767-74761786 | Msa0521810:intron | 20.0% |
| !!! | TGTTGACTATAAAATATTGT+AGG | + | chr3_4:74761871-74761890 | Msa0521810:intron | 20.0% |
| !! | GTTGACTATAAAATATTGTA+GGG | + | chr3_4:74761872-74761891 | Msa0521810:intron | 20.0% |
| !! | TGAAAAAAATAGTTCAACTA+CGG | - | chr3_4:74762045-74762064 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGATCAATCAAG+TGG | + | chr3_4:74762134-74762153 | Msa0521810:intron | 20.0% |
| !! | AAGGAAAATATTTCTTATTC+AGG | - | chr3_4:74762686-74762705 | None:intergenic | 20.0% |
| !! | TTTCTAAGTTAAAAATAGAC+GGG | - | chr3_4:74763072-74763091 | None:intergenic | 20.0% |
| !!! | ATGGAAAATGACAAATTTTT+GGG | - | chr3_4:74763138-74763157 | None:intergenic | 20.0% |
| !! | TTAGGCTAATTAATATGATT+AGG | + | chr3_4:74763303-74763322 | Msa0521810:intron | 20.0% |
| !! | TAGGCTAATTAATATGATTA+GGG | + | chr3_4:74763304-74763323 | Msa0521810:intron | 20.0% |
| !! | TAAAGTTATTAATTAAGCGT+TGG | - | chr3_4:74763335-74763354 | None:intergenic | 20.0% |
| !! | TAATAACATGCATAACAAAA+AGG | + | chr3_4:74763386-74763405 | Msa0521810:intron | 20.0% |
| !!! | AGAATTTTTCAAGAAATAGT+TGG | + | chr3_4:74763440-74763459 | Msa0521810:intron | 20.0% |
| !!! | AATAGTTGGCAAATTTTAAT+TGG | + | chr3_4:74763454-74763473 | Msa0521810:intron | 20.0% |
| !!! | AGGAAATTGTTTCTATAAAA+TGG | - | chr3_4:74763621-74763640 | None:intergenic | 20.0% |
| !!! | TTTTACAAGAATTGATTTTG+AGG | - | chr3_4:74763641-74763660 | None:intergenic | 20.0% |
| !! | TACCATAAATATATATGAGT+AGG | + | chr3_4:74764046-74764065 | Msa0521810:intron | 20.0% |
| !! | ACCATAAATATATATGAGTA+GGG | + | chr3_4:74764047-74764066 | Msa0521810:intron | 20.0% |
| !!! | TATTGTATCCATTTTTTTTG+AGG | + | chr3_4:74764136-74764155 | Msa0521810:intron | 20.0% |
| !!! | ATTGTATCCATTTTTTTTGA+GGG | + | chr3_4:74764137-74764156 | Msa0521810:intron | 20.0% |
| !! | ATTATGTGGTTATGTTTATT+CGG | + | chr3_4:74764219-74764238 | Msa0521810:intron | 20.0% |
| !!! | GTGACTTTAAAAAAAAAAGA+AGG | + | chr3_4:74764733-74764752 | Msa0521810:three_prime_UTR | 20.0% |
| ! | CTTTAACACCAAAATTACAA+AGG | + | chr3_4:74760772-74760791 | Msa0521810:CDS | 25.0% |
| !! | GCAATTTTCCTTTGTAATTT+TGG | - | chr3_4:74760783-74760802 | None:intergenic | 25.0% |
| ! | AATTGCTAAAATCAACAAAG+AGG | + | chr3_4:74760797-74760816 | Msa0521810:CDS | 25.0% |
| ! | ATTGCTAAAATCAACAAAGA+GGG | + | chr3_4:74760798-74760817 | Msa0521810:CDS | 25.0% |
| !! | TAATCTTGGTCCTTTTAAAT+GGG | - | chr3_4:74760941-74760960 | None:intergenic | 25.0% |
| !! | TTAATCTTGGTCCTTTTAAA+TGG | - | chr3_4:74760942-74760961 | None:intergenic | 25.0% |
| ! | GCTCTAGTTAAAATAAACTT+TGG | - | chr3_4:74760983-74761002 | None:intergenic | 25.0% |
| ! | TCAGTGAAGATTTGTAAATT+AGG | - | chr3_4:74761029-74761048 | None:intergenic | 25.0% |
| !!! | TCATTGTTATTTTCTGTTGA+TGG | - | chr3_4:74761061-74761080 | None:intergenic | 25.0% |
| !!! | TTTTTTATGGCTAATAACGA+AGG | + | chr3_4:74761153-74761172 | Msa0521810:intron | 25.0% |
| !!! | TTAAGCTTTTTCAAAGTAGA+TGG | + | chr3_4:74761376-74761395 | Msa0521810:CDS | 25.0% |
| ! | GAAAAAAATAGTTCAACTAC+GGG | - | chr3_4:74762044-74762063 | None:intergenic | 25.0% |
| ! | AAAATCAACCACTTGATTAA+AGG | - | chr3_4:74762112-74762131 | None:intergenic | 25.0% |
| ! | AATCAAGTGGTGAATTTAAA+TGG | + | chr3_4:74762147-74762166 | Msa0521810:intron | 25.0% |
| ! | AAAATCAACCACTTGATTAA+AGG | - | chr3_4:74762112-74762131 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTGATCAATCAAG+TGG | + | chr3_4:74762257-74762276 | Msa0521810:intron | 25.0% |
| ! | AATCAAGTGGTGAATTTAAA+TGG | + | chr3_4:74762147-74762166 | Msa0521810:intron | 25.0% |
| ! | CTCTGTCAAAAAAAAAATTG+AGG | + | chr3_4:74762636-74762655 | Msa0521810:intron | 25.0% |
| !! | ACTTCATCTATTTCTTGTAA+TGG | + | chr3_4:74762750-74762769 | Msa0521810:intron | 25.0% |
| ! | TAACAAAATTACTAATCGCA+TGG | + | chr3_4:74763099-74763118 | Msa0521810:intron | 25.0% |
| !! | CATGGAAAATGACAAATTTT+TGG | - | chr3_4:74763139-74763158 | None:intergenic | 25.0% |
| ! | TAATTAATATGATTAGGGCT+GGG | + | chr3_4:74763309-74763328 | Msa0521810:intron | 25.0% |
| ! | AGATTAACGAATTGCATATT+TGG | + | chr3_4:74763689-74763708 | Msa0521810:intron | 25.0% |
| !! | TAATCTCCATTGTTTTCTAA+GGG | - | chr3_4:74763792-74763811 | None:intergenic | 25.0% |
| !!! | ATTACATACCTCTAGTTTTT+TGG | - | chr3_4:74764000-74764019 | None:intergenic | 25.0% |
| !! | CTAGAGGTATGTAATTAATT+AGG | + | chr3_4:74764005-74764024 | Msa0521810:intron | 25.0% |
| ! | ACCCTACTCATATATATTTA+TGG | - | chr3_4:74764051-74764070 | None:intergenic | 25.0% |
| ! | ACTACATGATACAAATTATG+TGG | + | chr3_4:74764205-74764224 | Msa0521810:intron | 25.0% |
| ! | GTTAAACTTATTGTAGATGA+AGG | - | chr3_4:74764376-74764395 | None:intergenic | 25.0% |
| TCTATAAAAGCCAACCTATT+TGG | + | chr3_4:74760594-74760613 | Msa0521810:intron | 30.0% | |
| CTATAAAAGCCAACCTATTT+GGG | + | chr3_4:74760595-74760614 | Msa0521810:intron | 30.0% | |
| GGTATGATTAAACCCAAATA+AGG | - | chr3_4:74760825-74760844 | None:intergenic | 30.0% | |
| GGGTTAAGTTCAAAAGAATT+TGG | - | chr3_4:74760846-74760865 | None:intergenic | 30.0% | |
| GTGAAGATTTGTAAATTAGG+TGG | - | chr3_4:74761026-74761045 | None:intergenic | 30.0% | |
| ! | ATGTTGCTATTCCACATTAT+TGG | + | chr3_4:74761452-74761471 | Msa0521810:CDS | 30.0% |
| ! | TGTTGCTATTCCACATTATT+GGG | + | chr3_4:74761453-74761472 | Msa0521810:CDS | 30.0% |
| TAAAAAGCAATGAATGTGCA+TGG | + | chr3_4:74761709-74761728 | Msa0521810:intron | 30.0% | |
| ! | AAAGGTATGTATGATTGCAA+CGG | - | chr3_4:74762016-74762035 | None:intergenic | 30.0% |
| TTATGTCACCTTTAATCAAG+TGG | + | chr3_4:74762101-74762120 | Msa0521810:intron | 30.0% | |
| TTATGTCACCTTTAATCAAG+TGG | + | chr3_4:74762101-74762120 | Msa0521810:intron | 30.0% | |
| CAAACACAATTAACAAGTTG+AGG | + | chr3_4:74762606-74762625 | Msa0521810:intron | 30.0% | |
| ! | TCAATTTGATGTTGTTGACT+TGG | + | chr3_4:74762818-74762837 | Msa0521810:intron | 30.0% |
| !! | ATTTTAGTGTGTTCCTTTCA+AGG | + | chr3_4:74762844-74762863 | Msa0521810:intron | 30.0% |
| ! | CTTTTCTGTGTCAATTTTGA+TGG | + | chr3_4:74762881-74762900 | Msa0521810:intron | 30.0% |
| ATCTATCAAATTCATGTGCA+TGG | + | chr3_4:74762930-74762949 | Msa0521810:intron | 30.0% | |
| TCTATCAAATTCATGTGCAT+GGG | + | chr3_4:74762931-74762950 | Msa0521810:intron | 30.0% | |
| !!! | TCTCAGACTTTGTTTTTTGA+AGG | + | chr3_4:74763010-74763029 | Msa0521810:intron | 30.0% |
| !!! | CTCAGACTTTGTTTTTTGAA+GGG | + | chr3_4:74763011-74763030 | Msa0521810:intron | 30.0% |
| AAGAAAAACAAAAGTCTGAG+AGG | - | chr3_4:74763041-74763060 | None:intergenic | 30.0% | |
| TAAAATTAACCTCAACTGAG+TGG | + | chr3_4:74763215-74763234 | Msa0521810:intron | 30.0% | |
| CTAATTAATATGATTAGGGC+TGG | + | chr3_4:74763308-74763327 | Msa0521810:intron | 30.0% | |
| CGAAGTTTGTAATAATCTGA+TGG | + | chr3_4:74763712-74763731 | Msa0521810:intron | 30.0% | |
| ! | GTAATCTCCATTGTTTTCTA+AGG | - | chr3_4:74763793-74763812 | None:intergenic | 30.0% |
| AAAACAATGGAGATTACACA+AGG | + | chr3_4:74763796-74763815 | Msa0521810:CDS | 30.0% | |
| AAACAATGGAGATTACACAA+GGG | + | chr3_4:74763797-74763816 | Msa0521810:CDS | 30.0% | |
| TTTACATCAAACTTAAGTGC+TGG | + | chr3_4:74763846-74763865 | Msa0521810:CDS | 30.0% | |
| AATTGCTCCCTCAAAAAAAA+TGG | - | chr3_4:74764147-74764166 | None:intergenic | 30.0% | |
| !! | TATTTTTCAGCAAATGAAGC+TGG | + | chr3_4:74764245-74764264 | Msa0521810:intron | 30.0% |
| GCATATCATTGCACTAATTA+CGG | - | chr3_4:74764640-74764659 | None:intergenic | 30.0% | |
| GTAAACAACAACTTTGTTCT+TGG | + | chr3_4:74764668-74764687 | Msa0521810:three_prime_UTR | 30.0% | |
| TATAGGAAGACAACAACTGT+GGG | - | chr3_4:74760638-74760657 | None:intergenic | 35.0% | |
| ATATAGGAAGACAACAACTG+TGG | - | chr3_4:74760639-74760658 | None:intergenic | 35.0% | |
| TGTCTGGGTGTAGATAAAAA+TGG | + | chr3_4:74760665-74760684 | Msa0521810:exon | 35.0% | |
| ATAAAAATGGCAGCTACTCA+TGG | + | chr3_4:74760678-74760697 | Msa0521810:exon | 35.0% | |
| TAAAAATGGCAGCTACTCAT+GGG | + | chr3_4:74760679-74760698 | Msa0521810:exon | 35.0% | |
| !! | AGTCTTGTTCATGTTTCTTG+TGG | + | chr3_4:74760707-74760726 | Msa0521810:CDS | 35.0% |
| TGTTTCTTGTGGCATTTATG+TGG | + | chr3_4:74760718-74760737 | Msa0521810:CDS | 35.0% | |
| ! | ACAACTCACGAATGCATTTT+GGG | - | chr3_4:74760751-74760770 | None:intergenic | 35.0% |
| ! | AACAAAGAGGGTCCTTATTT+GGG | + | chr3_4:74760810-74760829 | Msa0521810:CDS | 35.0% |
| ! | GACAACATCATAGATTTTGC+AGG | + | chr3_4:74760897-74760916 | Msa0521810:CDS | 35.0% |
| TGCGTCTATTCCCATTTAAA+AGG | + | chr3_4:74760928-74760947 | Msa0521810:intron | 35.0% | |
| TTATGGCTAATAACGAAGGA+AGG | + | chr3_4:74761157-74761176 | Msa0521810:intron | 35.0% | |
| !! | AGATTTCGTTTTGGATCCAT+TGG | + | chr3_4:74761180-74761199 | Msa0521810:CDS | 35.0% |
| ACCAGTTATACTAGTCATGA+CGG | + | chr3_4:74761209-74761228 | Msa0521810:CDS | 35.0% | |
| GTAGATGGAGTTGTTCATTA+CGG | + | chr3_4:74761391-74761410 | Msa0521810:CDS | 35.0% | |
| TAGATGGAGTTGTTCATTAC+GGG | + | chr3_4:74761392-74761411 | Msa0521810:CDS | 35.0% | |
| TCTCAGTTGCTAACTTTGTT+GGG | - | chr3_4:74762965-74762984 | None:intergenic | 35.0% | |
| TTCTCAGTTGCTAACTTTGT+TGG | - | chr3_4:74762966-74762985 | None:intergenic | 35.0% | |
| ATGTATCTGCACATGAGAAT+GGG | + | chr3_4:74763156-74763175 | Msa0521810:intron | 35.0% | |
| ! | TACTCACGTCTCATTTGTTA+AGG | + | chr3_4:74763244-74763263 | Msa0521810:intron | 35.0% |
| ! | ACTCACGTCTCATTTGTTAA+GGG | + | chr3_4:74763245-74763264 | Msa0521810:intron | 35.0% |
| TATCAAGTCGAGTGTATGTT+AGG | - | chr3_4:74763670-74763689 | None:intergenic | 35.0% | |
| TAACGATTGTATATGTGCAG+AGG | + | chr3_4:74763739-74763758 | Msa0521810:intron | 35.0% | |
| ATTGTATATGTGCAGAGGTA+TGG | + | chr3_4:74763744-74763763 | Msa0521810:intron | 35.0% | |
| ! | TTGTATATGTGCAGAGGTAT+GGG | + | chr3_4:74763745-74763764 | Msa0521810:intron | 35.0% |
| ACGTTACCCTTAGAAAACAA+TGG | + | chr3_4:74763783-74763802 | Msa0521810:CDS | 35.0% | |
| ACAACCAACTCAACAATCTA+TGG | + | chr3_4:74763880-74763899 | Msa0521810:CDS | 35.0% | |
| AAGGTAGTACTTGGAATCAA+CGG | - | chr3_4:74763973-74763992 | None:intergenic | 35.0% | |
| TTTGGCAATAAGGTAGTACT+TGG | - | chr3_4:74763982-74764001 | None:intergenic | 35.0% | |
| !!! | CCTCTAGTTTTTTGGCAATA+AGG | - | chr3_4:74763992-74764011 | None:intergenic | 35.0% |
| CCTTATTGCCAAAAAACTAG+AGG | + | chr3_4:74763989-74764008 | Msa0521810:CDS | 35.0% | |
| GGTATGTAATTAATTAGGCC+TGG | + | chr3_4:74764010-74764029 | Msa0521810:intron | 35.0% | |
| TGGTATAGTAGTTTGAATCC+AGG | - | chr3_4:74764031-74764050 | None:intergenic | 35.0% | |
| CTCTTATATGCTTGCAACAA+AGG | + | chr3_4:74764430-74764449 | Msa0521810:CDS | 35.0% | |
| TCATAACATAGTTCACCACT+TGG | - | chr3_4:74764604-74764623 | None:intergenic | 35.0% | |
| CAACAACTTTGTTCTTGGTT+TGG | + | chr3_4:74764673-74764692 | Msa0521810:three_prime_UTR | 35.0% | |
| AATGAAGGACCCAAATAGGT+TGG | - | chr3_4:74760607-74760626 | None:intergenic | 40.0% | |
| GAGTAATGAAGGACCCAAAT+AGG | - | chr3_4:74760611-74760630 | None:intergenic | 40.0% | |
| CTGTGGGATTTGAGTAATGA+AGG | - | chr3_4:74760622-74760641 | None:intergenic | 40.0% | |
| TTCCTATATTGCGTGTGTCT+GGG | + | chr3_4:74760650-74760669 | Msa0521810:five_prime_UTR | 40.0% | |
| ! | CACAACTCACGAATGCATTT+TGG | - | chr3_4:74760752-74760771 | None:intergenic | 40.0% |
| CAACAAAGAGGGTCCTTATT+TGG | + | chr3_4:74760809-74760828 | Msa0521810:CDS | 40.0% | |
| AACCCTCTTCTTCAAAATCC+AGG | + | chr3_4:74760861-74760880 | Msa0521810:CDS | 40.0% | |
| !! | AGCCTGGATTTTGAAGAAGA+GGG | - | chr3_4:74760866-74760885 | None:intergenic | 40.0% |
| !! | TAGCCTGGATTTTGAAGAAG+AGG | - | chr3_4:74760867-74760886 | None:intergenic | 40.0% |
| ! | GAAGGAAGGAGATTTCGTTT+TGG | + | chr3_4:74761171-74761190 | Msa0521810:intron | 40.0% |
| !! | TATAACTGGTTTGTCGCCAA+TGG | - | chr3_4:74761199-74761218 | None:intergenic | 40.0% |
| CCAGTTATACTAGTCATGAC+GGG | + | chr3_4:74761210-74761229 | Msa0521810:CDS | 40.0% | |
| TCCACATTATTGGGCTCATT+TGG | + | chr3_4:74761462-74761481 | Msa0521810:CDS | 40.0% | |
| !! | TCATGCTTTGTTGTTGTCGA+CGG | + | chr3_4:74761792-74761811 | Msa0521810:intron | 40.0% |
| ! | TATTGTAGGGTCCTTTTCGA+AGG | + | chr3_4:74761885-74761904 | Msa0521810:intron | 40.0% |
| ! | ATTGTAGGGTCCTTTTCGAA+GGG | + | chr3_4:74761886-74761905 | Msa0521810:intron | 40.0% |
| TTACCAAACACCCTTCGAAA+AGG | - | chr3_4:74761899-74761918 | None:intergenic | 40.0% | |
| CACCTGACTTTCAGAGAAAA+GGG | - | chr3_4:74762412-74762431 | None:intergenic | 40.0% | |
| ATCGAACATGAGACCTTGAA+AGG | - | chr3_4:74762860-74762879 | None:intergenic | 40.0% | |
| CATTCTCATGTGCAGATACA+TGG | - | chr3_4:74763157-74763176 | None:intergenic | 40.0% | |
| CATGTATCTGCACATGAGAA+TGG | + | chr3_4:74763155-74763174 | Msa0521810:intron | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | - | chr3_4:74763493-74763512 | None:intergenic | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr3_4:74763516-74763535 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr3_4:74763519-74763538 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr3_4:74763527-74763546 | Msa0521810:intron | 40.0% | |
| GAGATTACACAAGGGAAGTA+GGG | + | chr3_4:74763805-74763824 | Msa0521810:CDS | 40.0% | |
| GGTACCATAGATTGTTGAGT+TGG | - | chr3_4:74763887-74763906 | None:intergenic | 40.0% | |
| AACAAAGGCAACATGCTCTT+TGG | + | chr3_4:74763943-74763962 | Msa0521810:CDS | 40.0% | |
| ACAAAGGCAACATGCTCTTT+GGG | + | chr3_4:74763944-74763963 | Msa0521810:CDS | 40.0% | |
| AGGTAGTACTTGGAATCAAC+GGG | - | chr3_4:74763972-74763991 | None:intergenic | 40.0% | |
| ! | TTTTCAGCAAATGAAGCTGG+AGG | + | chr3_4:74764248-74764267 | Msa0521810:intron | 40.0% |
| TAAGTTTAACGTGAGTCCAG+TGG | + | chr3_4:74764386-74764405 | Msa0521810:CDS | 40.0% | |
| GATTCCCTTCATTGCTATCA+GGG | + | chr3_4:74764452-74764471 | Msa0521810:CDS | 40.0% | |
| TATCAGGGCTCTTTCTGATT+TGG | + | chr3_4:74764467-74764486 | Msa0521810:CDS | 40.0% | |
| !! | TTGTTCTTGGTTTGGTTGTC+TGG | + | chr3_4:74764681-74764700 | Msa0521810:three_prime_UTR | 40.0% |
| CTTCCTATATTGCGTGTGTC+TGG | + | chr3_4:74760649-74760668 | Msa0521810:five_prime_UTR | 45.0% | |
| TTGTCACTAGCAGTATAGCC+TGG | - | chr3_4:74760882-74760901 | None:intergenic | 45.0% | |
| AGAGCTGCACCTAGTAAACA+AGG | + | chr3_4:74760998-74761017 | Msa0521810:intron | 45.0% | |
| GAGCTGCACCTAGTAAACAA+GGG | + | chr3_4:74760999-74761018 | Msa0521810:intron | 45.0% | |
| ! | TAGGTGGTCCCTTGTTTACT+AGG | - | chr3_4:74761010-74761029 | None:intergenic | 45.0% |
| CCCGTCATGACTAGTATAAC+TGG | - | chr3_4:74761213-74761232 | None:intergenic | 45.0% | |
| GTTGTTCATTACGGGATTGC+TGG | + | chr3_4:74761400-74761419 | Msa0521810:CDS | 45.0% | |
| GCAAACCCTTCCTTGCATAT+CGG | + | chr3_4:74761427-74761446 | Msa0521810:CDS | 45.0% | |
| CATCTCCGATATGCAAGGAA+GGG | - | chr3_4:74761435-74761454 | None:intergenic | 45.0% | |
| ACATCTCCGATATGCAAGGA+AGG | - | chr3_4:74761436-74761455 | None:intergenic | 45.0% | |
| AGCAACATCTCCGATATGCA+AGG | - | chr3_4:74761440-74761459 | None:intergenic | 45.0% | |
| GCCAAATGAGCCCAATAATG+TGG | - | chr3_4:74761466-74761485 | None:intergenic | 45.0% | |
| ATTGGGCTCATTTGGCACTT+TGG | + | chr3_4:74761470-74761489 | Msa0521810:CDS | 45.0% | |
| !! | CACCCTTTTCTCTGAAAGTC+AGG | + | chr3_4:74762407-74762426 | Msa0521810:intron | 45.0% |
| CCACCTGACTTTCAGAGAAA+AGG | - | chr3_4:74762413-74762432 | None:intergenic | 45.0% | |
| !! | CCTTTTCTCTGAAAGTCAGG+TGG | + | chr3_4:74762410-74762429 | Msa0521810:intron | 45.0% |
| AGTCAGGTGGTGAAGACAAA+AGG | + | chr3_4:74762423-74762442 | Msa0521810:intron | 45.0% | |
| AGCAACTGAGAAGTCACTCA+TGG | + | chr3_4:74762974-74762993 | Msa0521810:intron | 45.0% | |
| GTAAAACGACCACTCAGTTG+AGG | - | chr3_4:74763227-74763246 | None:intergenic | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr3_4:74763499-74763518 | None:intergenic | 45.0% |
| TCTAAGGGTAACGTGTCATC+AGG | - | chr3_4:74763777-74763796 | None:intergenic | 45.0% | |
| GGAGATTACACAAGGGAAGT+AGG | + | chr3_4:74763804-74763823 | Msa0521810:CDS | 45.0% | |
| TTGTTCAGGAATGCCACCAA+CGG | - | chr3_4:74763928-74763947 | None:intergenic | 45.0% | |
| ! | TTGGTGGCATTCCTGAACAA+AGG | + | chr3_4:74763928-74763947 | Msa0521810:CDS | 45.0% |
| AGAGCATGTTGCCTTTGTTC+AGG | - | chr3_4:74763942-74763961 | None:intergenic | 45.0% | |
| GGTAGTACTTGGAATCAACG+GGG | - | chr3_4:74763971-74763990 | None:intergenic | 45.0% | |
| ATGCTTGACAACGACACCAA+AGG | + | chr3_4:74764290-74764309 | Msa0521810:CDS | 45.0% | |
| CTGTCTACAAGCACAACCTT+TGG | - | chr3_4:74764309-74764328 | None:intergenic | 45.0% | |
| AAGGTTGTGCTTGTAGACAG+AGG | + | chr3_4:74764309-74764328 | Msa0521810:CDS | 45.0% | |
| TAGACAGAGGAACAAGTGCA+GGG | + | chr3_4:74764322-74764341 | Msa0521810:CDS | 45.0% | |
| GGATTCCCTTCATTGCTATC+AGG | + | chr3_4:74764451-74764470 | Msa0521810:CDS | 45.0% | |
| AGAGCCCTGATAGCAATGAA+GGG | - | chr3_4:74764459-74764478 | None:intergenic | 45.0% | |
| AAGAGCCCTGATAGCAATGA+AGG | - | chr3_4:74764460-74764479 | None:intergenic | 45.0% | |
| ACATAGTTCACCACTTGGAG+TGG | - | chr3_4:74764599-74764618 | None:intergenic | 45.0% | |
| !! | GATTATTTAATATTAATTAT+TGG | + | chr3_4:74761268-74761287 | Msa0521810:intron | 5.0% |
| !! | TATATAAATAATAATTATTG+TGG | - | chr3_4:74761518-74761537 | None:intergenic | 5.0% |
| !!! | ATTAAAAAATATTTTCATTA+TGG | + | chr3_4:74762579-74762598 | Msa0521810:intron | 5.0% |
| CACCCAGACACACGCAATAT+AGG | - | chr3_4:74760655-74760674 | None:intergenic | 50.0% | |
| ! | AGTCATGACGGGATTGAGTG+TGG | + | chr3_4:74761221-74761240 | Msa0521810:CDS | 50.0% |
| GGGATTGAGTGTGGTACGTA+TGG | + | chr3_4:74761230-74761249 | Msa0521810:intron | 50.0% | |
| !! | CTCATTTGGCACTTTGGAGC+TGG | + | chr3_4:74761476-74761495 | Msa0521810:CDS | 50.0% |
| !!! | GGTCCTTTTCGAAGGGTGTT+TGG | + | chr3_4:74761893-74761912 | Msa0521810:intron | 50.0% |
| GTTCAACTACGGGCTCTCAA+AGG | - | chr3_4:74762034-74762053 | None:intergenic | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr3_4:74763506-74763525 | Msa0521810:intron | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr3_4:74763511-74763530 | None:intergenic | 50.0% | |
| ! | TATGTGCAGAGGTATGGGCA+AGG | + | chr3_4:74763750-74763769 | Msa0521810:intron | 50.0% |
| ! | ATGTGCAGAGGTATGGGCAA+GGG | + | chr3_4:74763751-74763770 | Msa0521810:intron | 50.0% |
| CGGGGAAAATCTCTTCTGGT+TGG | - | chr3_4:74763908-74763927 | None:intergenic | 50.0% | |
| CCAACGGGGAAAATCTCTTC+TGG | - | chr3_4:74763912-74763931 | None:intergenic | 50.0% | |
| ! | CCAGAAGAGATTTTCCCCGT+TGG | + | chr3_4:74763909-74763928 | Msa0521810:CDS | 50.0% |
| ! | GAAGAGATTTTCCCCGTTGG+TGG | + | chr3_4:74763912-74763931 | Msa0521810:CDS | 50.0% |
| TGTTCAGGAATGCCACCAAC+GGG | - | chr3_4:74763927-74763946 | None:intergenic | 50.0% | |
| GTAGACAGAGGAACAAGTGC+AGG | + | chr3_4:74764321-74764340 | Msa0521810:CDS | 50.0% | |
| TAACGTGAGTCCAGTGGACA+TGG | + | chr3_4:74764392-74764411 | Msa0521810:CDS | 50.0% | |
| GATGCACTTTCCATGTCCAC+TGG | - | chr3_4:74764405-74764424 | None:intergenic | 50.0% | |
| ! | GGACATGGAAAGTGCATCAG+TGG | + | chr3_4:74764407-74764426 | Msa0521810:CDS | 50.0% |
| !! | AGGGCTCTTTCTGATTTGGC+TGG | + | chr3_4:74764471-74764490 | Msa0521810:CDS | 50.0% |
| !! | GCTCTTTCTGATTTGGCTGG+CGG | + | chr3_4:74764474-74764493 | Msa0521810:CDS | 50.0% |
| !! | TGAGAAGGTATCAGCCTCGT+TGG | - | chr3_4:74764514-74764533 | None:intergenic | 50.0% |
| CACAGCAACAGAGTTAGTGG+CGG | - | chr3_4:74764544-74764563 | None:intergenic | 50.0% | |
| GACCACAGCAACAGAGTTAG+TGG | - | chr3_4:74764547-74764566 | None:intergenic | 50.0% | |
| TGTCATCACACCACTCCAAG+TGG | + | chr3_4:74764586-74764605 | Msa0521810:CDS | 50.0% | |
| !! | TTTGGCACTTTGGAGCTGGC+AGG | + | chr3_4:74761480-74761499 | Msa0521810:CDS | 55.0% |
| GTTCAGGAATGCCACCAACG+GGG | - | chr3_4:74763926-74763945 | None:intergenic | 55.0% | |
| !! | CTTTCTGATTTGGCTGGCGG+CGG | + | chr3_4:74764477-74764496 | Msa0521810:CDS | 55.0% |
| GGCTGATACCTTCTCACCAC+TGG | + | chr3_4:74764518-74764537 | Msa0521810:CDS | 55.0% | |
| CGCCACTAACTCTGTTGCTG+TGG | + | chr3_4:74764542-74764561 | Msa0521810:CDS | 55.0% | |
| ACAGAGTTAGTGGCGGCCAG+TGG | - | chr3_4:74764537-74764556 | None:intergenic | 60.0% | |
| AGTGGCGGCCAGTGGTGAGA+AGG | - | chr3_4:74764529-74764548 | None:intergenic | 65.0% | |
| TTTGGCTGGCGGCGGCACTG+CGG | + | chr3_4:74764485-74764504 | Msa0521810:CDS | 70.0% | |
| CGGCACTGCGGAGTCCAACG+AGG | + | chr3_4:74764497-74764516 | Msa0521810:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74760581 | 74764809 | 74760581 | ID=Msa0521810;Name=Msa0521810 |
| chr3_4 | mRNA | 74760581 | 74764809 | 74760581 | ID=Msa0521810-mRNA-1;Parent=Msa0521810;Name=Msa0521810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=83|1|1|1|0.8|0.66|6|198|355 |
| chr3_4 | exon | 74760581 | 74760612 | 74760581 | ID=Msa0521810-mRNA-1:exon:21176;Parent=Msa0521810-mRNA-1 |
| chr3_4 | exon | 74760633 | 74760918 | 74760633 | ID=Msa0521810-mRNA-1:exon:21177;Parent=Msa0521810-mRNA-1 |
| chr3_4 | exon | 74761175 | 74761242 | 74761175 | ID=Msa0521810-mRNA-1:exon:21178;Parent=Msa0521810-mRNA-1 |
| chr3_4 | exon | 74761346 | 74761501 | 74761346 | ID=Msa0521810-mRNA-1:exon:21179;Parent=Msa0521810-mRNA-1 |
| chr3_4 | exon | 74763759 | 74764010 | 74763759 | ID=Msa0521810-mRNA-1:exon:21180;Parent=Msa0521810-mRNA-1 |
| chr3_4 | exon | 74764255 | 74764809 | 74764255 | ID=Msa0521810-mRNA-1:exon:21181;Parent=Msa0521810-mRNA-1 |
| chr3_4 | five_prime_UTR | 74760581 | 74760612 | 74760581 | ID=Msa0521810-mRNA-1:five_prime_utr;Parent=Msa0521810-mRNA-1 |
| chr3_4 | five_prime_UTR | 74760633 | 74760683 | 74760633 | ID=Msa0521810-mRNA-1:five_prime_utr;Parent=Msa0521810-mRNA-1 |
| chr3_4 | CDS | 74760684 | 74760918 | 74760684 | ID=Msa0521810-mRNA-1:cds;Parent=Msa0521810-mRNA-1 |
| chr3_4 | CDS | 74761175 | 74761242 | 74761175 | ID=Msa0521810-mRNA-1:cds;Parent=Msa0521810-mRNA-1 |
| chr3_4 | CDS | 74761346 | 74761501 | 74761346 | ID=Msa0521810-mRNA-1:cds;Parent=Msa0521810-mRNA-1 |
| chr3_4 | CDS | 74763759 | 74764010 | 74763759 | ID=Msa0521810-mRNA-1:cds;Parent=Msa0521810-mRNA-1 |
| chr3_4 | CDS | 74764255 | 74764611 | 74764255 | ID=Msa0521810-mRNA-1:cds;Parent=Msa0521810-mRNA-1 |
| chr3_4 | three_prime_UTR | 74764612 | 74764809 | 74764612 | ID=Msa0521810-mRNA-1:three_prime_utr;Parent=Msa0521810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
