Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522550 | XP_003603701.1 | 90.173 | 346 | 13 | 4 | 1 | 336 | 1 | 335 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522550 | sp|Q9FGF0|PGML1_ARATH | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.07e-145 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522550 | G7J452 | 90.173 | 346 | 13 | 4 | 1 | 336 | 1 | 335 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101500 | Msa0522550 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
| Msa0478440 | Msa0522550 | 0.927387 | 1.261258e-91 | -8.615850e-47 |
| Msa0522550 | Msa0692040 | 0.809599 | 1.747317e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522550 | MtrunA17_Chr3g0141101 | 90.173 | 346 | 13 | 4 | 1 | 336 | 1 | 335 | 0.0 | 617 |
| Msa0522550 | MtrunA17_Chr5g0428091 | 76.173 | 277 | 64 | 2 | 50 | 326 | 37 | 311 | 3.59e-157 | 442 |
| Msa0522550 | MtrunA17_Chr4g0049431 | 68.905 | 283 | 86 | 2 | 52 | 333 | 1 | 282 | 1.40e-145 | 412 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0522550 | AT5G64460.4 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.6 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.10 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.2 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.1 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.8 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT5G64460.3 | 70.588 | 272 | 79 | 1 | 52 | 323 | 1 | 271 | 7.18e-146 | 413 |
| Msa0522550 | AT1G58280.1 | 61.875 | 320 | 118 | 2 | 9 | 328 | 3 | 318 | 2.18e-140 | 400 |
| Msa0522550 | AT1G58280.3 | 67.266 | 278 | 90 | 1 | 51 | 328 | 27 | 303 | 1.27e-139 | 398 |
| Msa0522550 | AT1G58280.4 | 67.266 | 278 | 90 | 1 | 51 | 328 | 26 | 302 | 1.73e-139 | 397 |
| Msa0522550 | AT1G58280.2 | 57.391 | 345 | 118 | 3 | 9 | 328 | 3 | 343 | 4.38e-134 | 385 |
| Msa0522550 | AT2G17280.1 | 66.540 | 263 | 87 | 1 | 61 | 322 | 8 | 270 | 7.25e-133 | 379 |
| Msa0522550 | AT2G17280.2 | 66.540 | 263 | 87 | 1 | 61 | 322 | 8 | 270 | 7.25e-133 | 379 |
| Msa0522550 | AT5G64460.11 | 71.121 | 232 | 67 | 0 | 92 | 323 | 1 | 232 | 5.31e-124 | 356 |
| Msa0522550 | AT5G64460.7 | 71.121 | 232 | 67 | 0 | 92 | 323 | 1 | 232 | 5.31e-124 | 356 |
| Msa0522550 | AT5G64460.9 | 71.121 | 232 | 67 | 0 | 92 | 323 | 1 | 232 | 5.31e-124 | 356 |
| Msa0522550 | AT5G64460.5 | 70.526 | 190 | 56 | 0 | 134 | 323 | 1 | 190 | 2.35e-100 | 294 |
| Msa0522550 | AT1G09935.1 | 53.036 | 247 | 96 | 1 | 60 | 306 | 5 | 231 | 4.13e-90 | 269 |
| Msa0522550 | AT1G09935.2 | 52.893 | 242 | 94 | 1 | 60 | 301 | 5 | 226 | 6.76e-89 | 266 |
| Msa0522550 | AT1G09932.3 | 45.082 | 244 | 120 | 1 | 52 | 295 | 1 | 230 | 5.30e-67 | 210 |
| Msa0522550 | AT1G09932.1 | 44.578 | 249 | 124 | 1 | 52 | 300 | 1 | 235 | 8.16e-67 | 211 |
| Msa0522550 | AT1G09932.2 | 45.175 | 228 | 111 | 1 | 73 | 300 | 15 | 228 | 8.65e-63 | 200 |
| Msa0522550 | AT1G09932.4 | 39.759 | 249 | 111 | 2 | 52 | 300 | 1 | 210 | 1.00e-49 | 166 |
Find 106 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAATTGTTAATTATTATT+AGG | 0.155289 | 3_4:+75793342 | Msa0522550:three_prime_UTR |
| GTTGCTGACGAGAAACTTTC+TGG | 0.194341 | 3_4:+75793002 | Msa0522550:CDS |
| CAATTGCCGGAAACATATTT+TGG | 0.207388 | 3_4:-75791459 | None:intergenic |
| GCCATTGATGAATGTTAAAT+TGG | 0.230649 | 3_4:-75793132 | None:intergenic |
| TATTTACTTCCCTTCTTTCT+AGG | 0.234668 | 3_4:-75793255 | None:intergenic |
| AAAATTGTTAATTATTATTA+GGG | 0.242108 | 3_4:+75793343 | Msa0522550:three_prime_UTR |
| CATCATGTTTGTTACTTTGA+TGG | 0.261267 | 3_4:-75793032 | None:intergenic |
| CAAACAGCAGTTGGAGTCTT+TGG | 0.272032 | 3_4:+75790521 | Msa0522550:CDS |
| TCATTCTTCTCTCTAATATC+AGG | 0.303717 | 3_4:-75791662 | None:intergenic |
| TTCCGAAAGCACTTAGAGTA+TGG | 0.304941 | 3_4:-75792404 | None:intergenic |
| AGTATTGGTGGTAGCCAAAA+AGG | 0.304949 | 3_4:+75793286 | Msa0522550:three_prime_UTR |
| AATTATATGCTGATTTGATT+TGG | 0.310510 | 3_4:-75788065 | None:intergenic |
| GAGAAAGCGGGAAGAGAATA+AGG | 0.311297 | 3_4:-75793198 | None:intergenic |
| CTTTACTAAAACCATATAAC+TGG | 0.314598 | 3_4:-75793064 | None:intergenic |
| TTCCATACTCTAAGTGCTTT+CGG | 0.324037 | 3_4:+75792402 | Msa0522550:CDS |
| TGAGTACCAAAATATGTTTC+CGG | 0.340527 | 3_4:+75791453 | Msa0522550:CDS |
| GCAGATATGGATACTTCTTC+AGG | 0.355326 | 3_4:+75788951 | Msa0522550:intron |
| AGAGCTTTGCCGCGAGCATT+TGG | 0.411847 | 3_4:+75790655 | Msa0522550:CDS |
| TCAGTGGTCATCATTGATAA+GGG | 0.412522 | 3_4:+75792819 | Msa0522550:CDS |
| TCGTACGATAAGTACGCATC+AGG | 0.421068 | 3_4:-75789179 | None:intergenic |
| TTCAGTGGTCATCATTGATA+AGG | 0.422239 | 3_4:+75792818 | Msa0522550:CDS |
| AATGAGTGTGGGGATAAAAC+TGG | 0.431841 | 3_4:-75788189 | None:intergenic |
| GTTCTCGTTTAATAAAATAG+TGG | 0.433755 | 3_4:-75788159 | None:intergenic |
| CTTCAACATTGTGAAACCCT+TGG | 0.441453 | 3_4:-75789145 | None:intergenic |
| CAAGTCTCACCCCTCTCGGC+TGG | 0.443047 | 3_4:+75789213 | Msa0522550:CDS |
| GAGTCCTCTACCAACTTTCC+TGG | 0.444606 | 3_4:+75792945 | Msa0522550:CDS |
| ATTTACTTCCCTTCTTTCTA+GGG | 0.445222 | 3_4:-75793254 | None:intergenic |
| TCCAATTTAACATTCATCAA+TGG | 0.461919 | 3_4:+75793131 | Msa0522550:three_prime_UTR |
| TACAACGGTGCAACGGGTAA+AGG | 0.462790 | 3_4:-75788983 | None:intergenic |
| TTCAACATTGTGAAACCCTT+GGG | 0.465042 | 3_4:-75789144 | None:intergenic |
| CTTCTTTCACCCTAGAAAGA+AGG | 0.465149 | 3_4:+75793245 | Msa0522550:three_prime_UTR |
| AGAATGAAGAAGTTGCTGCC+AGG | 0.468158 | 3_4:+75791678 | Msa0522550:CDS |
| CACCCCTCTCGGCTGGAAGC+AGG | 0.471269 | 3_4:+75789220 | Msa0522550:CDS |
| CTTTCCTGGCAAAATTCCAC+AGG | 0.484324 | 3_4:+75792959 | Msa0522550:CDS |
| CAAGGGTTTCACAATGTTGA+AGG | 0.484805 | 3_4:+75789146 | Msa0522550:CDS |
| GATGCAAGTCTCACCCCTCT+CGG | 0.486259 | 3_4:+75789209 | Msa0522550:CDS |
| TTGCTGACGAGAAACTTTCT+GGG | 0.489770 | 3_4:+75793003 | Msa0522550:CDS |
| TAGGGTAATGCTTACTAGTA+CGG | 0.493813 | 3_4:+75793361 | Msa0522550:three_prime_UTR |
| TTTCTCGTCAGCAACATCAC+TGG | 0.499214 | 3_4:-75792994 | None:intergenic |
| GACTCCAACTGCTGTTTGCA+TGG | 0.504794 | 3_4:-75790516 | None:intergenic |
| GTAAATATCTGTGAAAGTAT+TGG | 0.508955 | 3_4:+75793271 | Msa0522550:three_prime_UTR |
| TAAAATGTATCATGAGAAAG+CGG | 0.514134 | 3_4:-75793211 | None:intergenic |
| GACGAGAAACTTTCTGGGAG+TGG | 0.517322 | 3_4:+75793008 | Msa0522550:CDS |
| GAAGATACGCGAAGTGAATG+TGG | 0.521298 | 3_4:-75788251 | None:intergenic |
| CTTCTTTCTAGGGTGAAAGA+AGG | 0.522353 | 3_4:-75793244 | None:intergenic |
| GTTATGGACACGCAAAGAAA+AGG | 0.523784 | 3_4:+75792347 | Msa0522550:CDS |
| CCGTTGTAAAACTCTTCACC+TGG | 0.524813 | 3_4:+75788998 | Msa0522550:CDS |
| GAATGAAGAAGTTGCTGCCA+GGG | 0.525220 | 3_4:+75791679 | Msa0522550:CDS |
| CAAAGCTCTACTGCTACAAA+TGG | 0.525638 | 3_4:-75790641 | None:intergenic |
| AACGTTGAGATACGCGGGGA+TGG | 0.527877 | 3_4:-75788226 | None:intergenic |
| TGTGGTGGTGCTGTTATAGT+TGG | 0.528369 | 3_4:-75788134 | None:intergenic |
| TTCTCGTCAGCAACATCACT+GGG | 0.530667 | 3_4:-75792993 | None:intergenic |
| TTCTTTCACCCTAGAAAGAA+GGG | 0.535795 | 3_4:+75793246 | Msa0522550:three_prime_UTR |
| TAATCTGAGAGAGCATGTTA+AGG | 0.541064 | 3_4:+75789436 | Msa0522550:CDS |
| CAAAATCGGAGCCATGGTAA+AGG | 0.543335 | 3_4:+75793313 | Msa0522550:three_prime_UTR |
| AATATCTGTGAAAGTATTGG+TGG | 0.546036 | 3_4:+75793274 | Msa0522550:three_prime_UTR |
| ACAGCAGTTGGAGTCTTTGG+TGG | 0.550104 | 3_4:+75790524 | Msa0522550:CDS |
| AGTTGGAGTCTTTGGTGGTG+AGG | 0.551014 | 3_4:+75790529 | Msa0522550:CDS |
| GGCAATCAAAATCGGAGCCA+TGG | 0.552136 | 3_4:+75793307 | Msa0522550:three_prime_UTR |
| ACGAGAAACTTTCTGGGAGT+GGG | 0.556422 | 3_4:+75793009 | Msa0522550:CDS |
| TGGTGCTGTTATAGTTGGCA+TGG | 0.557569 | 3_4:-75788129 | None:intergenic |
| CTTCGCGTATCTTCTCGCTC+AGG | 0.567075 | 3_4:+75788260 | Msa0522550:CDS |
| TTACCTGCTTCCAGCCGAGA+GGG | 0.567288 | 3_4:-75789223 | None:intergenic |
| TTTGCCAGGAAAGTTGGTAG+AGG | 0.574696 | 3_4:-75792949 | None:intergenic |
| TGGAGAACGTTGAGATACGC+GGG | 0.576761 | 3_4:-75788231 | None:intergenic |
| GTGGAGAACGTTGAGATACG+CGG | 0.579514 | 3_4:-75788232 | None:intergenic |
| ACATTCTCATTCATCAGAGG+AGG | 0.587925 | 3_4:-75790575 | None:intergenic |
| TTTAATAAAATAGTGGAATG+TGG | 0.594653 | 3_4:-75788152 | None:intergenic |
| TCCTCTGATGAATGAGAATG+TGG | 0.595062 | 3_4:+75790577 | Msa0522550:CDS |
| ATTGCTGTTGTTAGCCACAG+TGG | 0.597876 | 3_4:+75792372 | Msa0522550:CDS |
| GGTGGTGAGGCACACACTGA+TGG | 0.600230 | 3_4:+75790542 | Msa0522550:CDS |
| CATTCTCATTCATCAGAGGA+GGG | 0.600745 | 3_4:-75790574 | None:intergenic |
| TGAGATACGCGGGGATGGCG+AGG | 0.600976 | 3_4:-75788221 | None:intergenic |
| AGGTTGTGATGAAATGAGTG+TGG | 0.601404 | 3_4:-75788201 | None:intergenic |
| ATAAAGTTATACCTCAACAA+GGG | 0.601532 | 3_4:-75789500 | None:intergenic |
| TCCACATTCTCATTCATCAG+AGG | 0.604283 | 3_4:-75790578 | None:intergenic |
| AGGACCATGCAAACAGCAGT+TGG | 0.604452 | 3_4:+75790512 | Msa0522550:intron |
| TAAAGTTATACCTCAACAAG+GGG | 0.604692 | 3_4:-75789499 | None:intergenic |
| CAACATCACTGGGAAGGTCA+AGG | 0.605658 | 3_4:-75792983 | None:intergenic |
| AAAATGTATCATGAGAAAGC+GGG | 0.606668 | 3_4:-75793210 | None:intergenic |
| GGTTGTGATGAAATGAGTGT+GGG | 0.610556 | 3_4:-75788200 | None:intergenic |
| CATCCTTGTGATAAGAGAAG+AGG | 0.612650 | 3_4:+75791424 | Msa0522550:CDS |
| AGAGAGCATGTTAAGGCAAG+CGG | 0.615902 | 3_4:+75789443 | Msa0522550:CDS |
| ATTCTCATTCATCAGAGGAG+GGG | 0.621059 | 3_4:-75790573 | None:intergenic |
| CGTACGATAAGTACGCATCA+GGG | 0.621857 | 3_4:-75789178 | None:intergenic |
| CGTCAGCAACATCACTGGGA+AGG | 0.624278 | 3_4:-75792989 | None:intergenic |
| AGCTCTACTGCTACAAATGG+TGG | 0.625499 | 3_4:-75790638 | None:intergenic |
| ATGCAGGTTAGACATGCCCA+AGG | 0.629064 | 3_4:+75789128 | Msa0522550:intron |
| CAGTGGTCATCATTGATAAG+GGG | 0.635256 | 3_4:+75792820 | Msa0522550:CDS |
| AATAAAGTTATACCTCAACA+AGG | 0.644424 | 3_4:-75789501 | None:intergenic |
| TACCTGCTTCCAGCCGAGAG+GGG | 0.644968 | 3_4:-75789222 | None:intergenic |
| CTGGGAAGGTCAAGGCCCTG+TGG | 0.647778 | 3_4:-75792975 | None:intergenic |
| TGCAGGTTAGACATGCCCAA+GGG | 0.651450 | 3_4:+75789129 | Msa0522550:intron |
| ATGCCTCTTCTCTTATCACA+AGG | 0.652179 | 3_4:-75791427 | None:intergenic |
| TAATTGTGAGCTGCGTTCAG+TGG | 0.658742 | 3_4:+75792803 | Msa0522550:CDS |
| AATGAAGAAGTTGCTGCCAG+GGG | 0.664314 | 3_4:+75791680 | Msa0522550:CDS |
| TTTCCTGGCAAAATTCCACA+GGG | 0.673235 | 3_4:+75792960 | Msa0522550:CDS |
| ATTACCTGCTTCCAGCCGAG+AGG | 0.685732 | 3_4:-75789224 | None:intergenic |
| AATAAAATAGTGGAATGTGG+TGG | 0.696828 | 3_4:-75788149 | None:intergenic |
| CACCACATACCAAATGCTCG+CGG | 0.697669 | 3_4:-75790664 | None:intergenic |
| AGGGTGAAAGAAGGTGCCAG+AGG | 0.702493 | 3_4:-75793235 | None:intergenic |
| TGTTTAGATAGAGCGCGATG+AGG | 0.707425 | 3_4:+75791625 | Msa0522550:intron |
| AAAGTTATACCTCAACAAGG+GGG | 0.748645 | 3_4:-75789498 | None:intergenic |
| GTTGTGATGAAATGAGTGTG+GGG | 0.751427 | 3_4:-75788199 | None:intergenic |
| GGAGAACGTTGAGATACGCG+GGG | 0.751908 | 3_4:-75788230 | None:intergenic |
| TATGGAATAGAAAACCACTG+TGG | 0.804378 | 3_4:-75792386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTTTATAAAAAGTAAT+TGG | + | chr3_4:75791342-75791361 | Msa0522550:intron | 10.0% |
| !! | TTTGCATTTAATTATTTCAA+TGG | - | chr3_4:75788578-75788597 | None:intergenic | 15.0% |
| !! | ACTAATATAACATTCAAAAT+TGG | + | chr3_4:75788639-75788658 | Msa0522550:intron | 15.0% |
| !!! | AATAACTAGTTCAATTTTTT+TGG | - | chr3_4:75789474-75789493 | None:intergenic | 15.0% |
| !! | AGTAAATTAGTAACAAAATT+AGG | - | chr3_4:75789542-75789561 | None:intergenic | 15.0% |
| !! | TATTAAACATAAAACTGTAT+GGG | - | chr3_4:75790344-75790363 | None:intergenic | 15.0% |
| !! | ATATTAAACATAAAACTGTA+TGG | - | chr3_4:75790345-75790364 | None:intergenic | 15.0% |
| !!! | TTTTATAAAATAAGCAAGAA+AGG | - | chr3_4:75791336-75791355 | None:intergenic | 15.0% |
| !! | GAAAAAAAATCACATTATTA+TGG | + | chr3_4:75791826-75791845 | Msa0522550:intron | 15.0% |
| !! | ACACATAATTAATAATAAGA+CGG | + | chr3_4:75792536-75792555 | Msa0522550:intron | 15.0% |
| !!! | AATTATATGCTGATTTGATT+TGG | - | chr3_4:75788068-75788087 | None:intergenic | 20.0% |
| !!! | TTTAATAAAATAGTGGAATG+TGG | - | chr3_4:75788155-75788174 | None:intergenic | 20.0% |
| !!! | TATTCCAGGTTAATTTTTAA+TGG | + | chr3_4:75789381-75789400 | Msa0522550:intron | 20.0% |
| !! | GGTATAACTTTATTGTAATT+TGG | + | chr3_4:75789510-75789529 | Msa0522550:intron | 20.0% |
| !!! | ATTTTCTGTTATAAAAGAGA+GGG | + | chr3_4:75789734-75789753 | Msa0522550:intron | 20.0% |
| !!! | TTGTTGTTTCATTTCATATA+TGG | - | chr3_4:75790066-75790085 | None:intergenic | 20.0% |
| !!! | ACAGTTTTATGTTTAATATG+TGG | + | chr3_4:75790346-75790365 | Msa0522550:intron | 20.0% |
| !!! | CTCTTTAAAGCATTTATAAA+GGG | - | chr3_4:75790772-75790791 | None:intergenic | 20.0% |
| !!! | CTTTATAAATGCTTTAAAGA+GGG | + | chr3_4:75790771-75790790 | Msa0522550:intron | 20.0% |
| !! | TCCTAATTAATTAACAAAGA+AGG | - | chr3_4:75790875-75790894 | None:intergenic | 20.0% |
| !! | TAAAATAAAGCAAAGTGAAT+TGG | - | chr3_4:75790993-75791012 | None:intergenic | 20.0% |
| !!! | AGTTAGTTTGAGTATTTTTA+TGG | + | chr3_4:75791380-75791399 | Msa0522550:intron | 20.0% |
| !!! | AGTCTTATTGAAAAAGAAAT+AGG | + | chr3_4:75791779-75791798 | Msa0522550:intron | 20.0% |
| !!! | GTCTTATTGAAAAAGAAATA+GGG | + | chr3_4:75791780-75791799 | Msa0522550:intron | 20.0% |
| !!! | AAACAAGAGGTAAATTTTTA+TGG | - | chr3_4:75792004-75792023 | None:intergenic | 20.0% |
| !! | TTGAAACAAATAGTTGTATT+AGG | + | chr3_4:75792280-75792299 | Msa0522550:intron | 20.0% |
| !!! | ATAAGACGGTTTTTTTTTTT+TGG | + | chr3_4:75792550-75792569 | Msa0522550:intron | 20.0% |
| !!! | GTTTGATTTTAATTTGTTGT+TGG | + | chr3_4:75792644-75792663 | Msa0522550:intron | 20.0% |
| !! | GTATAAGTTATTCTGTAAAT+AGG | - | chr3_4:75792857-75792876 | None:intergenic | 20.0% |
| !!! | TTTTGTGTATTCATTTTTAC+AGG | + | chr3_4:75792907-75792926 | Msa0522550:intron | 20.0% |
| !! | TGTTTACATGTAAAAATCAA+TGG | - | chr3_4:75793157-75793176 | None:intergenic | 20.0% |
| ! | GTTCTCGTTTAATAAAATAG+TGG | - | chr3_4:75788162-75788181 | None:intergenic | 25.0% |
| ! | TGATCTAATTAAGCAAAGAA+GGG | - | chr3_4:75788358-75788377 | None:intergenic | 25.0% |
| ! | TTGATCTAATTAAGCAAAGA+AGG | - | chr3_4:75788359-75788378 | None:intergenic | 25.0% |
| ! | TGTTCAAGAAGACAATATAT+GGG | + | chr3_4:75788748-75788767 | Msa0522550:intron | 25.0% |
| !! | TCTTTATTTCGTTAGTATTG+TGG | + | chr3_4:75789089-75789108 | Msa0522550:intron | 25.0% |
| ! | CTAGATATAGTGATATACTA+AGG | - | chr3_4:75789327-75789346 | None:intergenic | 25.0% |
| ! | AAAATTAACCTGGAATATTG+CGG | - | chr3_4:75789378-75789397 | None:intergenic | 25.0% |
| ! | ATAAAGTTATACCTCAACAA+GGG | - | chr3_4:75789503-75789522 | None:intergenic | 25.0% |
| ! | AATAAAGTTATACCTCAACA+AGG | - | chr3_4:75789504-75789523 | None:intergenic | 25.0% |
| !!! | GTCAAAGATTTGTTACTTAT+TGG | + | chr3_4:75789572-75789591 | Msa0522550:intron | 25.0% |
| !! | GATTTTCTGTTATAAAAGAG+AGG | + | chr3_4:75789733-75789752 | Msa0522550:intron | 25.0% |
| !! | TTTTCTGTTATAAAAGAGAG+GGG | + | chr3_4:75789735-75789754 | Msa0522550:intron | 25.0% |
| ! | TTGACAAATATTGTTAGAGT+TGG | + | chr3_4:75789776-75789795 | Msa0522550:intron | 25.0% |
| !! | AAATATTGTTAGAGTTGGTT+AGG | + | chr3_4:75789781-75789800 | Msa0522550:intron | 25.0% |
| ! | AACAACTATATATCATGGAA+TGG | - | chr3_4:75789911-75789930 | None:intergenic | 25.0% |
| ! | CAAGAAACAACTATATATCA+TGG | - | chr3_4:75789916-75789935 | None:intergenic | 25.0% |
| !!! | ATAGTTGTTTCTTGACTTTA+CGG | + | chr3_4:75789922-75789941 | Msa0522550:intron | 25.0% |
| ! | AAGAGTCATAAACTAGATAT+TGG | - | chr3_4:75790160-75790179 | None:intergenic | 25.0% |
| ! | ATAAGCTCAATCATATTTGA+GGG | - | chr3_4:75790307-75790326 | None:intergenic | 25.0% |
| ! | TATAAGCTCAATCATATTTG+AGG | - | chr3_4:75790308-75790327 | None:intergenic | 25.0% |
| !!! | TCCTCTAGATTATTTTTTTC+CGG | + | chr3_4:75790452-75790471 | Msa0522550:intron | 25.0% |
| !! | AATTTTATTGCTTTGCAGTT+TGG | + | chr3_4:75790692-75790711 | Msa0522550:intron | 25.0% |
| !! | TTTAAAGCATTTATAAAGGG+AGG | - | chr3_4:75790769-75790788 | None:intergenic | 25.0% |
| !!! | CCTCTTTAAAGCATTTATAA+AGG | - | chr3_4:75790773-75790792 | None:intergenic | 25.0% |
| !!! | CCTTTATAAATGCTTTAAAG+AGG | + | chr3_4:75790770-75790789 | Msa0522550:intron | 25.0% |
| ! | GAAATGCTTAAATTACATGT+AGG | + | chr3_4:75790826-75790845 | Msa0522550:intron | 25.0% |
| ! | GCCTTCTTTGTTAATTAATT+AGG | + | chr3_4:75790871-75790890 | Msa0522550:intron | 25.0% |
| ! | GGATTAAGGAGTAAAATTAA+GGG | - | chr3_4:75790972-75790991 | None:intergenic | 25.0% |
| ! | TGGATTAAGGAGTAAAATTA+AGG | - | chr3_4:75790973-75790992 | None:intergenic | 25.0% |
| !!! | ACCATATTTCTAGTTAATGT+GGG | - | chr3_4:75791113-75791132 | None:intergenic | 25.0% |
| !!! | TACCATATTTCTAGTTAATG+TGG | - | chr3_4:75791114-75791133 | None:intergenic | 25.0% |
| !!! | TTAGATTTTGGATTTGAGTT+TGG | + | chr3_4:75791176-75791195 | Msa0522550:intron | 25.0% |
| !!! | TAGATTTTGGATTTGAGTTT+GGG | + | chr3_4:75791177-75791196 | Msa0522550:intron | 25.0% |
| ! | AGTGACTAGATTATTAGATT+AGG | + | chr3_4:75791259-75791278 | Msa0522550:intron | 25.0% |
| ! | TATAAAATAAGCAAGAAAGG+AGG | - | chr3_4:75791333-75791352 | None:intergenic | 25.0% |
| !! | ATTTGTTGGTAAGTTATGAA+TGG | + | chr3_4:75791565-75791584 | Msa0522550:intron | 25.0% |
| ! | AAATCACATTATTATGGTTG+AGG | + | chr3_4:75791832-75791851 | Msa0522550:intron | 25.0% |
| ! | ATTGGTTAAGAGGTAATAAA+AGG | + | chr3_4:75791908-75791927 | Msa0522550:intron | 25.0% |
| ! | TTTACTATGTTGCTCTTATA+CGG | + | chr3_4:75792091-75792110 | Msa0522550:intron | 25.0% |
| ! | TTCTATTCATATCTCTGTAT+TGG | + | chr3_4:75792319-75792338 | Msa0522550:intron | 25.0% |
| !!! | AATTTGCTAATGAACACTAA+AGG | + | chr3_4:75792580-75792599 | Msa0522550:intron | 25.0% |
| ! | TTTACTCAAAGGATTTCAAT+CGG | - | chr3_4:75792607-75792626 | None:intergenic | 25.0% |
| ! | AAATCCTTTGAGTAAAAAAC+TGG | + | chr3_4:75792611-75792630 | Msa0522550:intron | 25.0% |
| !! | TTTTCCAGTTTTTTACTCAA+AGG | - | chr3_4:75792618-75792637 | None:intergenic | 25.0% |
| ! | TTAAAAGTCCAATACAAGAA+AGG | - | chr3_4:75792746-75792765 | None:intergenic | 25.0% |
| ! | AAGTTATTCTGTAAATAGGA+TGG | - | chr3_4:75792853-75792872 | None:intergenic | 25.0% |
| !!! | ATTCATTTTTACAGGATGAT+TGG | + | chr3_4:75792915-75792934 | Msa0522550:intron | 25.0% |
| ! | CTTTACTAAAACCATATAAC+TGG | - | chr3_4:75793067-75793086 | None:intergenic | 25.0% |
| ! | TCCAATTTAACATTCATCAA+TGG | + | chr3_4:75793131-75793150 | Msa0522550:three_prime_UTR | 25.0% |
| ! | TAAAATGTATCATGAGAAAG+CGG | - | chr3_4:75793214-75793233 | None:intergenic | 25.0% |
| !! | GTAAATATCTGTGAAAGTAT+TGG | + | chr3_4:75793271-75793290 | Msa0522550:three_prime_UTR | 25.0% |
| !!! | TTTTAAAACTACCTTTACCA+TGG | - | chr3_4:75793327-75793346 | None:intergenic | 25.0% |
| ! | AATAAAATAGTGGAATGTGG+TGG | - | chr3_4:75788152-75788171 | None:intergenic | 30.0% |
| ! | AAGCAAATCATCGATTAAAC+TGG | - | chr3_4:75788474-75788493 | None:intergenic | 30.0% |
| CTGTTCAAGAAGACAATATA+TGG | + | chr3_4:75788747-75788766 | Msa0522550:intron | 30.0% | |
| CTTTCATGTTATTGCAGATA+TGG | + | chr3_4:75788938-75788957 | Msa0522550:intron | 30.0% | |
| !!! | TTTTAGTTAGCTTTGTGCAT+TGG | + | chr3_4:75789031-75789050 | Msa0522550:intron | 30.0% |
| AAATTAACCTGGAATATTGC+GGG | - | chr3_4:75789377-75789396 | None:intergenic | 30.0% | |
| ! | TCCAGGTTAATTTTTAATGG+TGG | + | chr3_4:75789384-75789403 | Msa0522550:intron | 30.0% |
| TCCACCATTAAAAATTAACC+TGG | - | chr3_4:75789388-75789407 | None:intergenic | 30.0% | |
| ! | TATTTGTTGCTCTATATGAC+AGG | + | chr3_4:75789409-75789428 | Msa0522550:intron | 30.0% |
| TAAAGTTATACCTCAACAAG+GGG | - | chr3_4:75789502-75789521 | None:intergenic | 30.0% | |
| ATGTGTATAAGAAGTCTGAT+AGG | + | chr3_4:75789630-75789649 | Msa0522550:intron | 30.0% | |
| AACAGAAAATCCCCTAAATT+CGG | - | chr3_4:75789724-75789743 | None:intergenic | 30.0% | |
| !! | TAGTTGTTTCTTGACTTTAC+GGG | + | chr3_4:75789923-75789942 | Msa0522550:intron | 30.0% |
| GATTTGTAAAGGACTTTGAT+AGG | - | chr3_4:75790000-75790019 | None:intergenic | 30.0% | |
| ATCAAAGTCCTTTACAAATC+AGG | + | chr3_4:75790000-75790019 | Msa0522550:intron | 30.0% | |
| ! | CGATTATTCCTGATTTGTAA+AGG | - | chr3_4:75790011-75790030 | None:intergenic | 30.0% |
| ATTGCAGAATCGAACTTAAA+TGG | + | chr3_4:75790040-75790059 | Msa0522550:intron | 30.0% | |
| ! | TTTAGAGTTTCATTCATCCT+AGG | - | chr3_4:75790130-75790149 | None:intergenic | 30.0% |
| ATGATTGAGCTTATAAAGAG+TGG | + | chr3_4:75790313-75790332 | Msa0522550:intron | 30.0% | |
| ACCGGAAAAAAATAATCTAG+AGG | - | chr3_4:75790456-75790475 | None:intergenic | 30.0% | |
| !!! | TCTAGATTATTTTTTTCCGG+TGG | + | chr3_4:75790455-75790474 | Msa0522550:intron | 30.0% |
| ATTGCTAAATATTCCATTGC+AGG | + | chr3_4:75790492-75790511 | Msa0522550:intron | 30.0% | |
| TAACAAAGAAGGCTTAAAGA+TGG | - | chr3_4:75790864-75790883 | None:intergenic | 30.0% | |
| AAGCAAAGTGAATTGGATTA+AGG | - | chr3_4:75790986-75791005 | None:intergenic | 30.0% | |
| CAAACTATTGTACATGACTT+TGG | - | chr3_4:75791031-75791050 | None:intergenic | 30.0% | |
| AGTCATGTACAATAGTTTGA+AGG | + | chr3_4:75791032-75791051 | Msa0522550:intron | 30.0% | |
| TCCCACATTAACTAGAAATA+TGG | + | chr3_4:75791109-75791128 | Msa0522550:intron | 30.0% | |
| AAGTAGTCCTTATATAACTC+AGG | + | chr3_4:75791135-75791154 | Msa0522550:intron | 30.0% | |
| AGAATTGCCTGAGTTATATA+AGG | - | chr3_4:75791145-75791164 | None:intergenic | 30.0% | |
| AATCCAAAATCTAACTCAAG+TGG | - | chr3_4:75791170-75791189 | None:intergenic | 30.0% | |
| AGAAAATCTGGAAAATCCTT+GGG | - | chr3_4:75791216-75791235 | None:intergenic | 30.0% | |
| ACTAGCTACATGATATGAAA+CGG | - | chr3_4:75791242-75791261 | None:intergenic | 30.0% | |
| TGAGTACCAAAATATGTTTC+CGG | + | chr3_4:75791453-75791472 | Msa0522550:CDS | 30.0% | |
| !! | ATTGATTTTTCACTGGTAAG+TGG | + | chr3_4:75791478-75791497 | Msa0522550:intron | 30.0% |
| ! | TTTTGTTCTGATGCATTTGT+TGG | + | chr3_4:75791551-75791570 | Msa0522550:intron | 30.0% |
| GGTAAGTTATGAATGGTATT+TGG | + | chr3_4:75791572-75791591 | Msa0522550:intron | 30.0% | |
| TCATTCTTCTCTCTAATATC+AGG | - | chr3_4:75791665-75791684 | None:intergenic | 30.0% | |
| CATTATTATGGTTGAGGTTT+AGG | + | chr3_4:75791838-75791857 | Msa0522550:intron | 30.0% | |
| ! | CTTTTCCTTAGGGTAATTTA+GGG | + | chr3_4:75791866-75791885 | Msa0522550:intron | 30.0% |
| TATTACCCTAAATTACCCTA+AGG | - | chr3_4:75791874-75791893 | None:intergenic | 30.0% | |
| CCTTTCTGACGAATAAAAAA+AGG | - | chr3_4:75792064-75792083 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTTATTCGTCAGAA+AGG | + | chr3_4:75792061-75792080 | Msa0522550:intron | 30.0% |
| ! | TATACGGAGTATTTATGAGT+TGG | + | chr3_4:75792107-75792126 | Msa0522550:intron | 30.0% |
| ! | TTATGAGTTGGATAGGAATA+TGG | + | chr3_4:75792119-75792138 | Msa0522550:intron | 30.0% |
| AGACATTCAGATTATGCATA+TGG | + | chr3_4:75792246-75792265 | Msa0522550:intron | 30.0% | |
| ATAGTTGTATTAGGCCATAA+TGG | + | chr3_4:75792289-75792308 | Msa0522550:intron | 30.0% | |
| AATAGAACACATGACCATTA+TGG | - | chr3_4:75792306-75792325 | None:intergenic | 30.0% | |
| !! | CATCATGTTTGTTACTTTGA+TGG | - | chr3_4:75793035-75793054 | None:intergenic | 30.0% |
| GCCATTGATGAATGTTAAAT+TGG | - | chr3_4:75793135-75793154 | None:intergenic | 30.0% | |
| AAAATGTATCATGAGAAAGC+GGG | - | chr3_4:75793213-75793232 | None:intergenic | 30.0% | |
| !! | TCATGATACATTTTAACCTC+TGG | + | chr3_4:75793219-75793238 | Msa0522550:three_prime_UTR | 30.0% |
| ATTTACTTCCCTTCTTTCTA+GGG | - | chr3_4:75793257-75793276 | None:intergenic | 30.0% | |
| TATTTACTTCCCTTCTTTCT+AGG | - | chr3_4:75793258-75793277 | None:intergenic | 30.0% | |
| !! | AATATCTGTGAAAGTATTGG+TGG | + | chr3_4:75793274-75793293 | Msa0522550:three_prime_UTR | 30.0% |
| AAGAAGGGAGAAAACGAAAT+TGG | - | chr3_4:75788343-75788362 | None:intergenic | 35.0% | |
| TTCTGTTATGTACTCGTCAT+TGG | + | chr3_4:75788430-75788449 | Msa0522550:intron | 35.0% | |
| TCTGTTATGTACTCGTCATT+GGG | + | chr3_4:75788431-75788450 | Msa0522550:intron | 35.0% | |
| ! | AAAAGCACACAACACAAGTT+TGG | - | chr3_4:75788723-75788742 | None:intergenic | 35.0% |
| AACTAAAATTGCCACAAACC+AGG | - | chr3_4:75789019-75789038 | None:intergenic | 35.0% | |
| ACTTATCCAAACTTGTATGC+AGG | + | chr3_4:75789112-75789131 | Msa0522550:intron | 35.0% | |
| TTCAACATTGTGAAACCCTT+GGG | - | chr3_4:75789147-75789166 | None:intergenic | 35.0% | |
| TTCAAACATTCTGCAGAGAT+TGG | + | chr3_4:75789288-75789307 | Msa0522550:intron | 35.0% | |
| ! | TAATCTGAGAGAGCATGTTA+AGG | + | chr3_4:75789436-75789455 | Msa0522550:CDS | 35.0% |
| AAAGTTATACCTCAACAAGG+GGG | - | chr3_4:75789501-75789520 | None:intergenic | 35.0% | |
| AAGTTGTGTTTGCATGACTT+GGG | - | chr3_4:75789665-75789684 | None:intergenic | 35.0% | |
| ACAGAAAATCCCCTAAATTC+GGG | - | chr3_4:75789723-75789742 | None:intergenic | 35.0% | |
| CGAATATGAGTCTTTGATTC+TGG | + | chr3_4:75789835-75789854 | Msa0522550:intron | 35.0% | |
| ! | AACGTTTTACCAATTGTCCT+AGG | + | chr3_4:75790110-75790129 | Msa0522550:intron | 35.0% |
| TTCATTCATCCTAGGACAAT+TGG | - | chr3_4:75790122-75790141 | None:intergenic | 35.0% | |
| ! | TTATGTCTCGTGTTACTCTT+CGG | + | chr3_4:75790200-75790219 | Msa0522550:intron | 35.0% |
| TTGAGCTTATAAAGAGTGGT+TGG | + | chr3_4:75790317-75790336 | Msa0522550:intron | 35.0% | |
| TGAGCTTATAAAGAGTGGTT+GGG | + | chr3_4:75790318-75790337 | Msa0522550:intron | 35.0% | |
| !!! | AGATTATTTTTTTCCGGTGG+TGG | + | chr3_4:75790458-75790477 | Msa0522550:intron | 35.0% |
| !!! | GATTATTTTTTTCCGGTGGT+GGG | + | chr3_4:75790459-75790478 | Msa0522550:intron | 35.0% |
| !!! | ATTATTTTTTTCCGGTGGTG+GGG | + | chr3_4:75790460-75790479 | Msa0522550:intron | 35.0% |
| CTTAAAGATGGTAAGGTAGA+CGG | - | chr3_4:75790852-75790871 | None:intergenic | 35.0% | |
| AAGAAGGCTTAAAGATGGTA+AGG | - | chr3_4:75790859-75790878 | None:intergenic | 35.0% | |
| ACTTACTGTGTTTGTTTCCT+GGG | + | chr3_4:75790919-75790938 | Msa0522550:intron | 35.0% | |
| AGGAGTAAAATTAAGGGACT+AGG | - | chr3_4:75790966-75790985 | None:intergenic | 35.0% | |
| !! | TGTTGATTCATTGTAGGATG+AGG | + | chr3_4:75791056-75791075 | Msa0522550:intron | 35.0% |
| ! | TCACCACTTGAGTTAGATTT+TGG | + | chr3_4:75791164-75791183 | Msa0522550:intron | 35.0% |
| GGGAATTCTAATTTAACCCA+AGG | + | chr3_4:75791197-75791216 | Msa0522550:intron | 35.0% | |
| GAGAAAATCTGGAAAATCCT+TGG | - | chr3_4:75791217-75791236 | None:intergenic | 35.0% | |
| ATGAAACGGTTGAGAAAATC+TGG | - | chr3_4:75791228-75791247 | None:intergenic | 35.0% | |
| !! | TTTATGGTGTTGCGTATTTC+AGG | + | chr3_4:75791396-75791415 | Msa0522550:intron | 35.0% |
| !! | TTATGGTGTTGCGTATTTCA+GGG | + | chr3_4:75791397-75791416 | Msa0522550:intron | 35.0% |
| ! | CAATTGCCGGAAACATATTT+TGG | - | chr3_4:75791462-75791481 | None:intergenic | 35.0% |
| ACCAGTGAAAAATCAATTGC+CGG | - | chr3_4:75791475-75791494 | None:intergenic | 35.0% | |
| ATTATGGTTGAGGTTTAGGA+TGG | + | chr3_4:75791842-75791861 | Msa0522550:intron | 35.0% | |
| CCTAAATTACCCTAAGGAAA+AGG | - | chr3_4:75791868-75791887 | None:intergenic | 35.0% | |
| ! | CCTTTTCCTTAGGGTAATTT+AGG | + | chr3_4:75791865-75791884 | Msa0522550:intron | 35.0% |
| TTAGGGTAATAAGTGTCCTA+AGG | + | chr3_4:75791883-75791902 | Msa0522550:intron | 35.0% | |
| AATAAGTGTCCTAAGGACAT+TGG | + | chr3_4:75791890-75791909 | Msa0522550:intron | 35.0% | |
| GGATTGTTTAAGGAAACAAG+AGG | - | chr3_4:75792017-75792036 | None:intergenic | 35.0% | |
| TTTCCTTAAACAATCCCCTT+AGG | + | chr3_4:75792021-75792040 | Msa0522550:intron | 35.0% | |
| TTCCTTAAACAATCCCCTTA+GGG | + | chr3_4:75792022-75792041 | Msa0522550:intron | 35.0% | |
| ! | GGAGTATTTATGAGTTGGAT+AGG | + | chr3_4:75792112-75792131 | Msa0522550:intron | 35.0% |
| !! | TTAAGTGGGATTAGCTACAT+GGG | - | chr3_4:75792175-75792194 | None:intergenic | 35.0% |
| !! | ATTAAGTGGGATTAGCTACA+TGG | - | chr3_4:75792176-75792195 | None:intergenic | 35.0% |
| ATGTAGCTAATCCCACTTAA+TGG | + | chr3_4:75792175-75792194 | Msa0522550:intron | 35.0% | |
| TGTAGCTAATCCCACTTAAT+GGG | + | chr3_4:75792176-75792195 | Msa0522550:intron | 35.0% | |
| TAATCCCACTTAATGGGATA+AGG | + | chr3_4:75792182-75792201 | Msa0522550:intron | 35.0% | |
| CAAACCTTATCCCATTAAGT+GGG | - | chr3_4:75792189-75792208 | None:intergenic | 35.0% | |
| ! | TAAGGTTTGGTCGTTATTGT+TGG | + | chr3_4:75792200-75792219 | Msa0522550:intron | 35.0% |
| TATGGAATAGAAAACCACTG+TGG | - | chr3_4:75792389-75792408 | None:intergenic | 35.0% | |
| TTCCATACTCTAAGTGCTTT+CGG | + | chr3_4:75792402-75792421 | Msa0522550:CDS | 35.0% | |
| TTGTCAAGCCTTTCTTGTAT+TGG | + | chr3_4:75792735-75792754 | Msa0522550:intron | 35.0% | |
| GCAAAGCTGTGAAAATAGAA+GGG | - | chr3_4:75792783-75792802 | None:intergenic | 35.0% | |
| AGCAAAGCTGTGAAAATAGA+AGG | - | chr3_4:75792784-75792803 | None:intergenic | 35.0% | |
| TTCAGTGGTCATCATTGATA+AGG | + | chr3_4:75792818-75792837 | Msa0522550:CDS | 35.0% | |
| TCAGTGGTCATCATTGATAA+GGG | + | chr3_4:75792819-75792838 | Msa0522550:CDS | 35.0% | |
| ! | TGAGCTTTTCTCCAGTTATA+TGG | + | chr3_4:75793053-75793072 | Msa0522550:three_prime_UTR | 35.0% |
| TTCTTTCACCCTAGAAAGAA+GGG | + | chr3_4:75793246-75793265 | Msa0522550:three_prime_UTR | 35.0% | |
| GCCAAAAAGGCAATCAAAAT+CGG | + | chr3_4:75793299-75793318 | Msa0522550:three_prime_UTR | 35.0% | |
| !!! | TCCGATTTTGATTGCCTTTT+TGG | - | chr3_4:75793303-75793322 | None:intergenic | 35.0% |
| TAGGGTAATGCTTACTAGTA+CGG | + | chr3_4:75793361-75793380 | Msa0522550:three_prime_UTR | 35.0% | |
| TGCTTACTAGTACGGAAAAA+TGG | + | chr3_4:75793369-75793388 | Msa0522550:three_prime_UTR | 35.0% | |
| AATGAGTGTGGGGATAAAAC+TGG | - | chr3_4:75788192-75788211 | None:intergenic | 40.0% | |
| GTTGTGATGAAATGAGTGTG+GGG | - | chr3_4:75788202-75788221 | None:intergenic | 40.0% | |
| GGTTGTGATGAAATGAGTGT+GGG | - | chr3_4:75788203-75788222 | None:intergenic | 40.0% | |
| AGGTTGTGATGAAATGAGTG+TGG | - | chr3_4:75788204-75788223 | None:intergenic | 40.0% | |
| GAGAGAAAGAGGATCGTAAT+TGG | - | chr3_4:75788288-75788307 | None:intergenic | 40.0% | |
| AAGGTGAATGAGAGAGAAAG+AGG | - | chr3_4:75788299-75788318 | None:intergenic | 40.0% | |
| CTGTTATGTACTCGTCATTG+GGG | + | chr3_4:75788432-75788451 | Msa0522550:intron | 40.0% | |
| TACTCCCTATCTCACAATGA+GGG | - | chr3_4:75788693-75788712 | None:intergenic | 40.0% | |
| TTACTCCCTATCTCACAATG+AGG | - | chr3_4:75788694-75788713 | None:intergenic | 40.0% | |
| ! | GTGACTTGCAAAGTTCATCA+CGG | - | chr3_4:75788900-75788919 | None:intergenic | 40.0% |
| ! | TTGCAAGTCACGCTTTCTTT+TGG | + | chr3_4:75788909-75788928 | Msa0522550:intron | 40.0% |
| ! | TGCAAGTCACGCTTTCTTTT+GGG | + | chr3_4:75788910-75788929 | Msa0522550:intron | 40.0% |
| GCAGATATGGATACTTCTTC+AGG | + | chr3_4:75788951-75788970 | Msa0522550:intron | 40.0% | |
| ! | AGAGTTTTACAACGGTGCAA+CGG | - | chr3_4:75788993-75789012 | None:intergenic | 40.0% |
| ! | CCAGGTGAAGAGTTTTACAA+CGG | - | chr3_4:75789001-75789020 | None:intergenic | 40.0% |
| ! | AAAACTCTTCACCTGGTTTG+TGG | + | chr3_4:75789005-75789024 | Msa0522550:intron | 40.0% |
| GTCTAACCTGCATACAAGTT+TGG | - | chr3_4:75789121-75789140 | None:intergenic | 40.0% | |
| CTTCAACATTGTGAAACCCT+TGG | - | chr3_4:75789148-75789167 | None:intergenic | 40.0% | |
| CAAGGGTTTCACAATGTTGA+AGG | + | chr3_4:75789146-75789165 | Msa0522550:CDS | 40.0% | |
| CTGTGAGAGTCTGCATAATA+AGG | - | chr3_4:75789252-75789271 | None:intergenic | 40.0% | |
| TTATTGTTTCCCCCTTGTTG+AGG | + | chr3_4:75789489-75789508 | Msa0522550:CDS | 40.0% | |
| GAAGTTGTGTTTGCATGACT+TGG | - | chr3_4:75789666-75789685 | None:intergenic | 40.0% | |
| TCTGTTATAAAAGAGAGGGG+AGG | + | chr3_4:75789738-75789757 | Msa0522550:intron | 40.0% | |
| CTGTTATAAAAGAGAGGGGA+GGG | + | chr3_4:75789739-75789758 | Msa0522550:intron | 40.0% | |
| TGTTATAAAAGAGAGGGGAG+GGG | + | chr3_4:75789740-75789759 | Msa0522550:intron | 40.0% | |
| AGGAGAGTTTCTCTCTAGTT+AGG | + | chr3_4:75789801-75789820 | Msa0522550:intron | 40.0% | |
| GATCTGTGGCAAAACAGAAA+AGG | - | chr3_4:75789871-75789890 | None:intergenic | 40.0% | |
| ! | TATGTCTCGTGTTACTCTTC+GGG | + | chr3_4:75790201-75790220 | Msa0522550:intron | 40.0% |
| ATTCTCATTCATCAGAGGAG+GGG | - | chr3_4:75790576-75790595 | None:intergenic | 40.0% | |
| CATTCTCATTCATCAGAGGA+GGG | - | chr3_4:75790577-75790596 | None:intergenic | 40.0% | |
| ACATTCTCATTCATCAGAGG+AGG | - | chr3_4:75790578-75790597 | None:intergenic | 40.0% | |
| TCCTCTGATGAATGAGAATG+TGG | + | chr3_4:75790577-75790596 | Msa0522550:CDS | 40.0% | |
| TCCACATTCTCATTCATCAG+AGG | - | chr3_4:75790581-75790600 | None:intergenic | 40.0% | |
| CAAAGCTCTACTGCTACAAA+TGG | - | chr3_4:75790644-75790663 | None:intergenic | 40.0% | |
| ! | TTGCTTTGCAGTTTGGAATC+TGG | + | chr3_4:75790699-75790718 | Msa0522550:intron | 40.0% |
| ! | TGCTTTGCAGTTTGGAATCT+GGG | + | chr3_4:75790700-75790719 | Msa0522550:intron | 40.0% |
| CACTTACTGTGTTTGTTTCC+TGG | + | chr3_4:75790918-75790937 | Msa0522550:intron | 40.0% | |
| !! | GAAGGCTGTTGATTCATTGT+AGG | + | chr3_4:75791050-75791069 | Msa0522550:intron | 40.0% |
| !! | TATGGTGTTGCGTATTTCAG+GGG | + | chr3_4:75791398-75791417 | Msa0522550:intron | 40.0% |
| CATCCTTGTGATAAGAGAAG+AGG | + | chr3_4:75791424-75791443 | Msa0522550:CDS | 40.0% | |
| ATGCCTCTTCTCTTATCACA+AGG | - | chr3_4:75791430-75791449 | None:intergenic | 40.0% | |
| !! | TCCGGCAATTGATTTTTCAC+TGG | + | chr3_4:75791471-75791490 | Msa0522550:CDS | 40.0% |
| TCACTGGTAAGTGGAAAAAG+TGG | + | chr3_4:75791487-75791506 | Msa0522550:intron | 40.0% | |
| TTCCAAAAATTTCAGTCCCC+TGG | - | chr3_4:75791699-75791718 | None:intergenic | 40.0% | |
| !! | GGGGACTGAAATTTTTGGAA+TGG | + | chr3_4:75791699-75791718 | Msa0522550:CDS | 40.0% |
| !! | TTTAGGATGGCCTTTTCCTT+AGG | + | chr3_4:75791855-75791874 | Msa0522550:intron | 40.0% |
| ! | TTAGGATGGCCTTTTCCTTA+GGG | + | chr3_4:75791856-75791875 | Msa0522550:intron | 40.0% |
| ! | TCCTAAGGACATTGGTTAAG+AGG | + | chr3_4:75791898-75791917 | Msa0522550:intron | 40.0% |
| ACCTCTTAACCAATGTCCTT+AGG | - | chr3_4:75791902-75791921 | None:intergenic | 40.0% | |
| CCAAACCTTATCCCATTAAG+TGG | - | chr3_4:75792190-75792209 | None:intergenic | 40.0% | |
| CCACTTAATGGGATAAGGTT+TGG | + | chr3_4:75792187-75792206 | Msa0522550:intron | 40.0% | |
| ! | TCATATCTCTGTATTGGTCC+AGG | + | chr3_4:75792325-75792344 | Msa0522550:intron | 40.0% |
| GTTATGGACACGCAAAGAAA+AGG | + | chr3_4:75792347-75792366 | Msa0522550:CDS | 40.0% | |
| !! | TTCCGAAAGCACTTAGAGTA+TGG | - | chr3_4:75792407-75792426 | None:intergenic | 40.0% |
| CAGTGGTCATCATTGATAAG+GGG | + | chr3_4:75792820-75792839 | Msa0522550:CDS | 40.0% | |
| ! | TGGAATTTTGCCAGGAAAGT+TGG | - | chr3_4:75792958-75792977 | None:intergenic | 40.0% |
| TTTCCTGGCAAAATTCCACA+GGG | + | chr3_4:75792960-75792979 | Msa0522550:CDS | 40.0% | |
| TTGCTGACGAGAAACTTTCT+GGG | + | chr3_4:75793003-75793022 | Msa0522550:CDS | 40.0% | |
| !! | CTTCTTTCTAGGGTGAAAGA+AGG | - | chr3_4:75793247-75793266 | None:intergenic | 40.0% |
| CTTCTTTCACCCTAGAAAGA+AGG | + | chr3_4:75793245-75793264 | Msa0522550:three_prime_UTR | 40.0% | |
| !! | AGTATTGGTGGTAGCCAAAA+AGG | + | chr3_4:75793286-75793305 | Msa0522550:three_prime_UTR | 40.0% |
| !! | TGGTGCTGTTATAGTTGGCA+TGG | - | chr3_4:75788132-75788151 | None:intergenic | 45.0% |
| !! | TGTGGTGGTGCTGTTATAGT+TGG | - | chr3_4:75788137-75788156 | None:intergenic | 45.0% |
| GAAGATACGCGAAGTGAATG+TGG | - | chr3_4:75788254-75788273 | None:intergenic | 45.0% | |
| ! | GCAAAGAAAGAGCGTGGAAA+AGG | - | chr3_4:75788318-75788337 | None:intergenic | 45.0% |
| TTGGAAGCAAAGAAAGAGCG+TGG | - | chr3_4:75788324-75788343 | None:intergenic | 45.0% | |
| TGTGTCCCTCATTGTGAGAT+AGG | + | chr3_4:75788685-75788704 | Msa0522550:intron | 45.0% | |
| GTGTCCCTCATTGTGAGATA+GGG | + | chr3_4:75788686-75788705 | Msa0522550:intron | 45.0% | |
| ! | GAGTTTTACAACGGTGCAAC+GGG | - | chr3_4:75788992-75789011 | None:intergenic | 45.0% |
| CCGTTGTAAAACTCTTCACC+TGG | + | chr3_4:75788998-75789017 | Msa0522550:CDS | 45.0% | |
| CGTACGATAAGTACGCATCA+GGG | - | chr3_4:75789181-75789200 | None:intergenic | 45.0% | |
| TCGTACGATAAGTACGCATC+AGG | - | chr3_4:75789182-75789201 | None:intergenic | 45.0% | |
| CTTCATTCCCGCAATATTCC+AGG | + | chr3_4:75789367-75789386 | Msa0522550:intron | 45.0% | |
| ! | AGAGAGCATGTTAAGGCAAG+CGG | + | chr3_4:75789443-75789462 | Msa0522550:CDS | 45.0% |
| ! | TGTTTGCATGACTTGGGTCT+TGG | - | chr3_4:75789659-75789678 | None:intergenic | 45.0% |
| TTAGTACCCTGCCCGAATTT+AGG | + | chr3_4:75789709-75789728 | Msa0522550:intron | 45.0% | |
| TAGTACCCTGCCCGAATTTA+GGG | + | chr3_4:75789710-75789729 | Msa0522550:intron | 45.0% | |
| AAATCCCCTAAATTCGGGCA+GGG | - | chr3_4:75789718-75789737 | None:intergenic | 45.0% | |
| AAAATCCCCTAAATTCGGGC+AGG | - | chr3_4:75789719-75789738 | None:intergenic | 45.0% | |
| AACGACGAGCTTAAGATCTG+TGG | - | chr3_4:75789885-75789904 | None:intergenic | 45.0% | |
| AAGTCGTGCTTGCATGACTT+GGG | + | chr3_4:75789965-75789984 | Msa0522550:intron | 45.0% | |
| ATTTGAATAGACCCCACCAC+CGG | - | chr3_4:75790474-75790493 | None:intergenic | 45.0% | |
| CAAACAGCAGTTGGAGTCTT+TGG | + | chr3_4:75790521-75790540 | Msa0522550:CDS | 45.0% | |
| AGCTCTACTGCTACAAATGG+TGG | - | chr3_4:75790641-75790660 | None:intergenic | 45.0% | |
| ATAATCTTACAGCAGCTCCC+AGG | - | chr3_4:75790939-75790958 | None:intergenic | 45.0% | |
| TGAGGACATGAAGTGTGTGT+TGG | + | chr3_4:75791074-75791093 | Msa0522550:intron | 45.0% | |
| GAGGACATGAAGTGTGTGTT+GGG | + | chr3_4:75791075-75791094 | Msa0522550:intron | 45.0% | |
| !! | ATGGTGTTGCGTATTTCAGG+GGG | + | chr3_4:75791399-75791418 | Msa0522550:intron | 45.0% |
| TGTTTAGATAGAGCGCGATG+AGG | + | chr3_4:75791625-75791644 | Msa0522550:intron | 45.0% | |
| AGAATGAAGAAGTTGCTGCC+AGG | + | chr3_4:75791678-75791697 | Msa0522550:CDS | 45.0% | |
| GAATGAAGAAGTTGCTGCCA+GGG | + | chr3_4:75791679-75791698 | Msa0522550:CDS | 45.0% | |
| AATGAAGAAGTTGCTGCCAG+GGG | + | chr3_4:75791680-75791699 | Msa0522550:CDS | 45.0% | |
| ! | TGCCAGGGGACTGAAATTTT+TGG | + | chr3_4:75791694-75791713 | Msa0522550:CDS | 45.0% |
| TGCCCTAAGGGGATTGTTTA+AGG | - | chr3_4:75792027-75792046 | None:intergenic | 45.0% | |
| ! | CTCTGTATTGGTCCAGGTTA+TGG | + | chr3_4:75792331-75792350 | Msa0522550:intron | 45.0% |
| TTCTTTGCGTGTCCATAACC+TGG | - | chr3_4:75792346-75792365 | None:intergenic | 45.0% | |
| ! | ATTGCTGTTGTTAGCCACAG+TGG | + | chr3_4:75792372-75792391 | Msa0522550:CDS | 45.0% |
| TAATTGTGAGCTGCGTTCAG+TGG | + | chr3_4:75792803-75792822 | Msa0522550:CDS | 45.0% | |
| !! | TTTGCCAGGAAAGTTGGTAG+AGG | - | chr3_4:75792952-75792971 | None:intergenic | 45.0% |
| CTTTCCTGGCAAAATTCCAC+AGG | + | chr3_4:75792959-75792978 | Msa0522550:CDS | 45.0% | |
| TTCTCGTCAGCAACATCACT+GGG | - | chr3_4:75792996-75793015 | None:intergenic | 45.0% | |
| TTTCTCGTCAGCAACATCAC+TGG | - | chr3_4:75792997-75793016 | None:intergenic | 45.0% | |
| GTTGCTGACGAGAAACTTTC+TGG | + | chr3_4:75793002-75793021 | Msa0522550:CDS | 45.0% | |
| ! | ACGAGAAACTTTCTGGGAGT+GGG | + | chr3_4:75793009-75793028 | Msa0522550:CDS | 45.0% |
| GAGAAAGCGGGAAGAGAATA+AGG | - | chr3_4:75793201-75793220 | None:intergenic | 45.0% | |
| CAAAATCGGAGCCATGGTAA+AGG | + | chr3_4:75793313-75793332 | Msa0522550:three_prime_UTR | 45.0% | |
| !! | ATATATATATATATATATAC+TGG | + | chr3_4:75788872-75788891 | Msa0522550:intron | 5.0% |
| !! | TAAAATTGTTAATTATTATT+AGG | + | chr3_4:75793342-75793361 | Msa0522550:three_prime_UTR | 5.0% |
| !! | AAAATTGTTAATTATTATTA+GGG | + | chr3_4:75793343-75793362 | Msa0522550:three_prime_UTR | 5.0% |
| TGGAGAACGTTGAGATACGC+GGG | - | chr3_4:75788234-75788253 | None:intergenic | 50.0% | |
| GTGGAGAACGTTGAGATACG+CGG | - | chr3_4:75788235-75788254 | None:intergenic | 50.0% | |
| TACAACGGTGCAACGGGTAA+AGG | - | chr3_4:75788986-75789005 | None:intergenic | 50.0% | |
| ATGCAGGTTAGACATGCCCA+AGG | + | chr3_4:75789128-75789147 | Msa0522550:intron | 50.0% | |
| TGCAGGTTAGACATGCCCAA+GGG | + | chr3_4:75789129-75789148 | Msa0522550:intron | 50.0% | |
| AGTACCCTGCCCGAATTTAG+GGG | + | chr3_4:75789711-75789730 | Msa0522550:intron | 50.0% | |
| GAAGTCGTGCTTGCATGACT+TGG | + | chr3_4:75789964-75789983 | Msa0522550:intron | 50.0% | |
| ! | TGCTTGCATGACTTGGGTCT+TGG | + | chr3_4:75789971-75789990 | Msa0522550:intron | 50.0% |
| CTGTTTGCATGGTCCTGCAA+TGG | - | chr3_4:75790508-75790527 | None:intergenic | 50.0% | |
| AGGACCATGCAAACAGCAGT+TGG | + | chr3_4:75790512-75790531 | Msa0522550:intron | 50.0% | |
| ! | GACTCCAACTGCTGTTTGCA+TGG | - | chr3_4:75790519-75790538 | None:intergenic | 50.0% |
| ACAGCAGTTGGAGTCTTTGG+TGG | + | chr3_4:75790524-75790543 | Msa0522550:CDS | 50.0% | |
| !! | AGTTGGAGTCTTTGGTGGTG+AGG | + | chr3_4:75790529-75790548 | Msa0522550:CDS | 50.0% |
| CACCACATACCAAATGCTCG+CGG | - | chr3_4:75790667-75790686 | None:intergenic | 50.0% | |
| ! | AGCGCGATGAGGACATTTTG+TGG | + | chr3_4:75791636-75791655 | Msa0522550:CDS | 50.0% |
| GAGTCCTCTACCAACTTTCC+TGG | + | chr3_4:75792945-75792964 | Msa0522550:CDS | 50.0% | |
| CAACATCACTGGGAAGGTCA+AGG | - | chr3_4:75792986-75793005 | None:intergenic | 50.0% | |
| ! | GACGAGAAACTTTCTGGGAG+TGG | + | chr3_4:75793008-75793027 | Msa0522550:CDS | 50.0% |
| GGCAATCAAAATCGGAGCCA+TGG | + | chr3_4:75793307-75793326 | Msa0522550:three_prime_UTR | 50.0% | |
| AACGTTGAGATACGCGGGGA+TGG | - | chr3_4:75788229-75788248 | None:intergenic | 55.0% | |
| GGAGAACGTTGAGATACGCG+GGG | - | chr3_4:75788233-75788252 | None:intergenic | 55.0% | |
| CTTCGCGTATCTTCTCGCTC+AGG | + | chr3_4:75788260-75788279 | Msa0522550:CDS | 55.0% | |
| GATGCAAGTCTCACCCCTCT+CGG | + | chr3_4:75789209-75789228 | Msa0522550:CDS | 55.0% | |
| TTACCTGCTTCCAGCCGAGA+GGG | - | chr3_4:75789226-75789245 | None:intergenic | 55.0% | |
| ATTACCTGCTTCCAGCCGAG+AGG | - | chr3_4:75789227-75789246 | None:intergenic | 55.0% | |
| AGAGCTTTGCCGCGAGCATT+TGG | + | chr3_4:75790655-75790674 | Msa0522550:CDS | 55.0% | |
| TGCCGCGAGCATTTGGTATG+TGG | + | chr3_4:75790662-75790681 | Msa0522550:intron | 55.0% | |
| ! | AGGCCCTGTGGAATTTTGCC+AGG | - | chr3_4:75792966-75792985 | None:intergenic | 55.0% |
| CGTCAGCAACATCACTGGGA+AGG | - | chr3_4:75792992-75793011 | None:intergenic | 55.0% | |
| !! | AGGGTGAAAGAAGGTGCCAG+AGG | - | chr3_4:75793238-75793257 | None:intergenic | 55.0% |
| TACCTGCTTCCAGCCGAGAG+GGG | - | chr3_4:75789225-75789244 | None:intergenic | 60.0% | |
| GGTGGTGAGGCACACACTGA+TGG | + | chr3_4:75790542-75790561 | Msa0522550:CDS | 60.0% | |
| TGAGATACGCGGGGATGGCG+AGG | - | chr3_4:75788224-75788243 | None:intergenic | 65.0% | |
| CAAGTCTCACCCCTCTCGGC+TGG | + | chr3_4:75789213-75789232 | Msa0522550:CDS | 65.0% | |
| CTGGGAAGGTCAAGGCCCTG+TGG | - | chr3_4:75792978-75792997 | None:intergenic | 65.0% | |
| CACCCCTCTCGGCTGGAAGC+AGG | + | chr3_4:75789220-75789239 | Msa0522550:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 75788048 | 75793397 | 75788048 | ID=Msa0522550;Name=Msa0522550 |
| chr3_4 | mRNA | 75788048 | 75793397 | 75788048 | ID=Msa0522550-mRNA-1;Parent=Msa0522550;Name=Msa0522550-mRNA-1;_AED=0.10;_eAED=0.10;_QI=83|1|1|1|1|1|10|354|336 |
| chr3_4 | exon | 75788048 | 75788281 | 75788048 | ID=Msa0522550-mRNA-1:exon:21740;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75788955 | 75789019 | 75788955 | ID=Msa0522550-mRNA-1:exon:21741;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75789134 | 75789241 | 75789134 | ID=Msa0522550-mRNA-1:exon:21742;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75789431 | 75789510 | 75789431 | ID=Msa0522550-mRNA-1:exon:21743;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75790514 | 75790676 | 75790514 | ID=Msa0522550-mRNA-1:exon:21744;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75791418 | 75791492 | 75791418 | ID=Msa0522550-mRNA-1:exon:21745;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75791632 | 75791720 | 75791632 | ID=Msa0522550-mRNA-1:exon:21746;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75792347 | 75792466 | 75792347 | ID=Msa0522550-mRNA-1:exon:21747;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75792797 | 75792841 | 75792797 | ID=Msa0522550-mRNA-1:exon:21748;Parent=Msa0522550-mRNA-1 |
| chr3_4 | exon | 75792929 | 75793397 | 75792929 | ID=Msa0522550-mRNA-1:exon:21749;Parent=Msa0522550-mRNA-1 |
| chr3_4 | five_prime_UTR | 75788048 | 75788130 | 75788048 | ID=Msa0522550-mRNA-1:five_prime_utr;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75788131 | 75788281 | 75788131 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75788955 | 75789019 | 75788955 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75789134 | 75789241 | 75789134 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75789431 | 75789510 | 75789431 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75790514 | 75790676 | 75790514 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75791418 | 75791492 | 75791418 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75791632 | 75791720 | 75791632 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75792347 | 75792466 | 75792347 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75792797 | 75792841 | 75792797 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | CDS | 75792929 | 75793043 | 75792929 | ID=Msa0522550-mRNA-1:cds;Parent=Msa0522550-mRNA-1 |
| chr3_4 | three_prime_UTR | 75793044 | 75793397 | 75793044 | ID=Msa0522550-mRNA-1:three_prime_utr;Parent=Msa0522550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
