AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0692040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692040 MtrunA17_Chr4g0042041 86.347 271 3 1 1 271 1 237 4.26e-169 467
Msa0692040 MtrunA17_Chr2g0319301 68.750 272 42 5 1 271 1 230 4.13e-120 342
Msa0692040 MtrunA17_Chr2g0323031 50.186 269 108 10 9 271 12 260 6.03e-74 226
Msa0692040 MtrunA17_Chr1g0167821 42.125 273 118 7 5 271 8 246 4.33e-61 193
Msa0692040 MtrunA17_Chr4g0038511 51.515 99 47 1 110 208 6 103 2.97e-23 95.9
Msa0692040 MtrunA17_Chr1g0161461 38.760 129 70 2 88 208 47 174 5.50e-19 85.5
Msa0692040 MtrunA17_Chr4g0060591 29.801 151 88 3 74 216 1 141 2.38e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0692040 AT5G54680.1 63.736 273 58 4 1 271 1 234 1.24e-112 324
Msa0692040 AT1G51070.1 53.091 275 76 5 1 271 1 226 8.79e-90 266
Msa0692040 AT1G51070.2 49.835 303 109 6 1 271 1 292 3.87e-88 264
Msa0692040 AT3G23210.2 44.758 248 105 10 41 271 59 291 1.85e-54 178
Msa0692040 AT3G23210.1 44.758 248 105 10 41 271 88 320 3.29e-54 178
Msa0692040 AT4G14410.2 52.459 183 76 4 91 271 104 277 3.56e-54 177
Msa0692040 AT4G14410.3 52.459 183 76 4 91 271 104 277 3.56e-54 177
Msa0692040 AT4G14410.1 52.459 183 76 4 91 271 110 283 4.75e-54 177
Msa0692040 AT3G19860.1 35.196 179 81 4 109 258 4 176 2.91e-22 93.6
Msa0692040 AT3G19860.3 35.165 182 83 4 110 262 36 211 5.58e-22 93.6
Msa0692040 AT3G19860.2 35.165 182 83 4 110 262 58 233 5.67e-22 94.0
Msa0692040 AT4G36060.2 41.818 110 63 1 99 208 15 123 2.38e-18 82.8
Msa0692040 AT4G36060.4 41.818 110 63 1 99 208 15 123 2.67e-18 82.8
Msa0692040 AT4G36060.1 41.818 110 63 1 99 208 33 141 5.70e-18 82.0
Msa0692040 AT4G36060.3 41.818 110 63 1 99 208 33 141 6.51e-18 82.0

Find 163 sgRNAs with CRISPR-Local

Find 684 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTACTATTAATTTGGTTTC+TGG 0.116520 4_4:+60352375 None:intergenic
AGTTGGCATCTTTCAACTTT+TGG 0.148107 4_4:+60349541 None:intergenic
AGAAAAGATTAAAGAGTTAA+AGG 0.172284 4_4:-60349508 Msa0692040:intron
TTAATATAGTACTATTAATT+TGG 0.193057 4_4:+60352368 None:intergenic
CAGTGGCTTCCGTTTGTATT+TGG 0.227327 4_4:-60348950 Msa0692040:three_prime_UTR
GATACAATCTTGAGCTAAAA+TGG 0.237105 4_4:+60349021 None:intergenic
TGTAATTAAATTAATAATAA+TGG 0.253648 4_4:+60352336 None:intergenic
GAATACTTCTGAATTAATTC+TGG 0.257512 4_4:-60348922 Msa0692040:three_prime_UTR
AACTCCTGGATAACTAATAA+AGG 0.263274 4_4:+60349146 None:intergenic
GCTGGCTCTGTGCAATTGTT+TGG 0.284436 4_4:-60349048 Msa0692040:three_prime_UTR
ACTGTTTCGGTGGCCTTGTT+TGG 0.303209 4_4:+60352527 None:intergenic
GATGGCAGCCTTGTCGGTTT+TGG 0.311125 4_4:+60349608 None:intergenic
GTACTATTAATTTGGTTTCT+GGG 0.320494 4_4:+60352376 None:intergenic
CTGGCTCTGTGCAATTGTTT+GGG 0.325069 4_4:-60349047 Msa0692040:three_prime_UTR
GGGGTTGGTAAGTTTATAAA+AGG 0.329416 4_4:-60352560 Msa0692040:five_prime_UTR
TTGTTAGTATGTATTCTAAC+TGG 0.331198 4_4:-60348976 Msa0692040:three_prime_UTR
CCAATTTGTTGCCATGGGCT+TGG 0.333737 4_4:+60349172 None:intergenic
GAGAATAGAAAGAATGAGAT+TGG 0.335091 4_4:+60352451 None:intergenic
GTACCCATGTTATGAGGAAT+TGG 0.339493 4_4:+60350738 None:intergenic
CCAAGCCCATGGCAACAAAT+TGG 0.353392 4_4:-60349172 Msa0692040:CDS
AGAAAAGAAAAGAAAAGAAA+AGG 0.355227 4_4:+60352402 None:intergenic
TCGGTTGCACGAATGAGAAT+TGG 0.358451 4_4:+60352243 None:intergenic
AAATACTTAAATAATACATT+TGG 0.366035 4_4:-60348545 Msa0692040:three_prime_UTR
TTCCTTCCTCTGCCTTCACC+TGG 0.374748 4_4:-60352064 Msa0692040:CDS
CAACTTCTCCCGACATGCTT+TGG 0.380918 4_4:+60349771 None:intergenic
ACCACAGTGCTCATGGTGCT+TGG 0.383975 4_4:-60348601 Msa0692040:three_prime_UTR
GAAAAGAAAAGAAAAGAAAA+GGG 0.388463 4_4:+60352403 None:intergenic
CATATGGTATGTTGTTGATA+TGG 0.388909 4_4:-60348657 Msa0692040:three_prime_UTR
TCAACCTTGCTTCCAATGTC+AGG 0.389116 4_4:-60352025 Msa0692040:intron
TGCCGCAGGGAGTGCGGTGG+GGG 0.394894 4_4:+60349209 None:intergenic
TCCGAATGGTGACACAGTTA+AGG 0.403203 4_4:-60349572 Msa0692040:CDS
TAGGGTACGGAATGGTTTCC+CGG 0.404198 4_4:-60352157 Msa0692040:exon
GCTGAAATTGATGGCTCGTT+AGG 0.408473 4_4:-60350539 Msa0692040:CDS
TACCCATGTTATGAGGAATT+GGG 0.416672 4_4:+60350739 None:intergenic
GTACCCTTTATTAGTTATCC+AGG 0.420242 4_4:-60349150 Msa0692040:CDS
CTGAAATTGATGGCTCGTTA+GGG 0.421366 4_4:-60350538 Msa0692040:CDS
TCATAACATGGGTACATTTG+TGG 0.424583 4_4:-60350730 Msa0692040:CDS
CAAGGCAGAGAAAGAGAAGT+TGG 0.426792 4_4:-60349277 Msa0692040:CDS
CGGTTGCACGAATGAGAATT+GGG 0.429378 4_4:+60352244 None:intergenic
TTTCCCGGGAAAACACGAAT+TGG 0.429457 4_4:-60352142 Msa0692040:CDS
ACGAATTGGATTAACGATTA+CGG 0.430120 4_4:-60352128 Msa0692040:CDS
AGTAAAGGCACTATAAAGTT+GGG 0.431953 4_4:-60352582 Msa0692040:five_prime_UTR
GCTGCTAGTGCTGAAATTGA+TGG 0.434631 4_4:-60350548 Msa0692040:intron
CGTCCTCCAGTTGCCTAAGC+TGG 0.434808 4_4:-60349066 Msa0692040:exon
GGGCTGAGTGGGCCAGGTGA+AGG 0.436983 4_4:+60352052 None:intergenic
TACTAGCTCCAAAGCATGTC+GGG 0.441749 4_4:-60349779 Msa0692040:CDS
CCACAGTGCTCATGGTGCTT+GGG 0.445056 4_4:-60348600 Msa0692040:three_prime_UTR
CCCTTAACTGTGTCACCATT+CGG 0.446843 4_4:+60349571 None:intergenic
TCTCGGTACATATCTGAATT+CGG 0.450958 4_4:+60348697 None:intergenic
CCGAATGGTGACACAGTTAA+GGG 0.454973 4_4:-60349571 Msa0692040:CDS
AATTGCCACATTGCAACTCC+TGG 0.456516 4_4:+60349132 None:intergenic
CTAACAAAGCAAGAAGGTAT+TGG 0.457115 4_4:+60348992 None:intergenic
AATCAGGATGGCAGCCTTGT+CGG 0.459158 4_4:+60349602 None:intergenic
ACTCCTGGATAACTAATAAA+GGG 0.460680 4_4:+60349147 None:intergenic
CCGTACCCTAGCTACCTTCC+CGG 0.462208 4_4:+60352170 None:intergenic
CCATTCGGACAGCATCAATC+AGG 0.463542 4_4:+60349586 None:intergenic
CTACCACAAATCAACTGTTT+CGG 0.463884 4_4:+60352514 None:intergenic
CCACCGAAACAGTTGATTTG+TGG 0.464136 4_4:-60352517 Msa0692040:five_prime_UTR
AGGAAGAGCGAAGGTTGAAT+CGG 0.467851 4_4:+60352082 None:intergenic
CGCGATTCGCTGTCACGCGC+CGG 0.470140 4_4:-60352189 Msa0692040:five_prime_UTR
ACAGAGCCAGCTTAGGCAAC+TGG 0.474028 4_4:+60349060 None:intergenic
ATTCGGTTCGTGTGAGTACA+AGG 0.477260 4_4:+60348714 None:intergenic
TCTGACAGTCTCAAAGAGTC+TGG 0.477676 4_4:-60350512 Msa0692040:CDS
TATTGAACTAGGCTCCATCT+TGG 0.477914 4_4:-60349646 Msa0692040:CDS
AATGCCGCAGGGAGTGCGGT+GGG 0.478526 4_4:+60349207 None:intergenic
CCTTGTGCAGCAAATGCCGC+AGG 0.484770 4_4:+60349195 None:intergenic
CTAGGCTCCATCTTGGAGCC+TGG 0.485022 4_4:-60349639 Msa0692040:CDS
AGAATAGAAAGAATGAGATT+GGG 0.485836 4_4:+60352452 None:intergenic
CAAATACAAACGGAAGCCAC+TGG 0.486092 4_4:+60348951 None:intergenic
AAGTAAAGGCACTATAAAGT+TGG 0.486496 4_4:-60352583 Msa0692040:five_prime_UTR
GACATTGGAAGCAAGGTTGA+AGG 0.488201 4_4:+60352028 None:intergenic
TACAAATGTTTAAACAATCA+AGG 0.489822 4_4:-60348789 Msa0692040:three_prime_UTR
AGGGTACCAATTTGTTGCCA+TGG 0.491389 4_4:+60349166 None:intergenic
AGCAAGAAGGTATTGGTGAT+AGG 0.493895 4_4:+60348999 None:intergenic
ACAAATGTACCCATGTTATG+AGG 0.495707 4_4:+60350732 None:intergenic
GGGTACCAATTTGTTGCCAT+GGG 0.498672 4_4:+60349167 None:intergenic
TTCGCTGTCACGCGCCGGGA+AGG 0.500884 4_4:-60352184 Msa0692040:five_prime_UTR
GCGAAGGTTGAATCGGGAAC+GGG 0.501622 4_4:+60352089 None:intergenic
CACGCGCCGGGAAGGTAGCT+AGG 0.504584 4_4:-60352176 Msa0692040:five_prime_UTR
TTCCCCAATTCCTCATAACA+TGG 0.505000 4_4:-60350742 Msa0692040:CDS
AACAATCAAGGAATGAAAAG+TGG 0.506211 4_4:-60348777 Msa0692040:three_prime_UTR
GAAAAGAAAAGAAAAGGGTG+GGG 0.506703 4_4:+60352408 None:intergenic
GATATTAAACCTCCACGCTC+TGG 0.514052 4_4:-60348624 Msa0692040:three_prime_UTR
GCGATTCGCTGTCACGCGCC+GGG 0.514647 4_4:-60352188 Msa0692040:five_prime_UTR
ACATTGGAAGCAAGGTTGAA+GGG 0.515771 4_4:+60352029 None:intergenic
AAGAAAAGAAAAGAAAAGGG+TGG 0.516770 4_4:+60352406 None:intergenic
TGAGAAGAAAGGAACGAAGA+AGG 0.516940 4_4:+60352270 None:intergenic
GTGTGGTGTTGAAGTACATA+TGG 0.517533 4_4:-60348673 Msa0692040:three_prime_UTR
AGTGGGCCAGGTGAAGGCAG+AGG 0.522430 4_4:+60352058 None:intergenic
AGAAAAGAAAAGAAAAGGGT+GGG 0.522591 4_4:+60352407 None:intergenic
CTTAAATAATACATTTGGAT+CGG 0.522680 4_4:-60348540 Msa0692040:three_prime_UTR
GCTCCATCTTGGAGCCTGGA+AGG 0.524851 4_4:-60349635 Msa0692040:CDS
ATTGTTAGGTTTATTGAACT+AGG 0.530194 4_4:-60349657 Msa0692040:intron
GCTCTGGACCACAGTGCTCA+TGG 0.532824 4_4:-60348608 Msa0692040:three_prime_UTR
ATTCATAAGCCAAATACAAA+CGG 0.533567 4_4:+60348941 None:intergenic
GGAAGAGCGAAGGTTGAATC+GGG 0.533818 4_4:+60352083 None:intergenic
CCTGCGGCATTTGCTGCACA+AGG 0.540694 4_4:-60349195 Msa0692040:CDS
AAATGCCGCAGGGAGTGCGG+TGG 0.545674 4_4:+60349206 None:intergenic
ATTGGGGAAAATGCTACAGC+TGG 0.546305 4_4:+60350756 None:intergenic
ATTTATGCCACCTGCTGCAG+TGG 0.547258 4_4:-60349112 Msa0692040:CDS
TGTGAGGTATCCACTGCAGC+AGG 0.547849 4_4:+60349102 None:intergenic
TGGATCGGATGTTGCACCAA+GGG 0.549079 4_4:-60348525 Msa0692040:three_prime_UTR
ATCAAGGAATGAAAAGTGGA+AGG 0.551396 4_4:-60348773 Msa0692040:three_prime_UTR
CAATTGCACAGAGCCAGCTT+AGG 0.551987 4_4:+60349053 None:intergenic
ATGCCGCAGGGAGTGCGGTG+GGG 0.554371 4_4:+60349208 None:intergenic
AACATGGGTACATTTGTGGT+TGG 0.554812 4_4:-60350726 Msa0692040:CDS
AGCAAATGCCGCAGGGAGTG+CGG 0.555070 4_4:+60349203 None:intergenic
AAAGTTGAAAGATGCCAACT+CGG 0.556876 4_4:-60349538 Msa0692040:CDS
GGCAGAGGAAGGAAGAGCGA+AGG 0.557011 4_4:+60352073 None:intergenic
TACTTCAACACCACACATCT+CGG 0.557939 4_4:+60348680 None:intergenic
CTACTAGCTCCAAAGCATGT+CGG 0.561189 4_4:-60349780 Msa0692040:CDS
CATTGGAAGCAAGGTTGAAG+GGG 0.566545 4_4:+60352030 None:intergenic
GGGTTGGTAAGTTTATAAAA+GGG 0.572812 4_4:-60352559 Msa0692040:five_prime_UTR
GGCCAGGTGAAGGCAGAGGA+AGG 0.573845 4_4:+60352062 None:intergenic
GAATTGGGAATTGAGAAGAA+AGG 0.576158 4_4:+60352259 None:intergenic
AGGCCTTCCAGGCTCCAAGA+TGG 0.576941 4_4:+60349632 None:intergenic
GCTGCACAAGGCCAAGCCCA+TGG 0.577267 4_4:-60349183 Msa0692040:CDS
CCACAAATCAACTGTTTCGG+TGG 0.581810 4_4:+60352517 None:intergenic
AGCGAAGGTTGAATCGGGAA+CGG 0.583174 4_4:+60352088 None:intergenic
AGGGTACGGAATGGTTTCCC+GGG 0.585112 4_4:-60352156 Msa0692040:exon
AAGAGTCTGGTTCAAAGAAG+AGG 0.585185 4_4:-60350499 Msa0692040:intron
AAGCAGACTCAATTGACCCT+TGG 0.588041 4_4:+60348509 None:intergenic
GAGCACTGTGGTCCAGAGCG+TGG 0.589753 4_4:+60348612 None:intergenic
TCCCCAATTCCTCATAACAT+GGG 0.590348 4_4:-60350741 Msa0692040:CDS
AAAAGAAAAGAAAAGGGTGG+GGG 0.590639 4_4:+60352409 None:intergenic
TGCTGCAGTGGATACCTCAC+AGG 0.591418 4_4:-60349100 Msa0692040:CDS
GTAAAGGCACTATAAAGTTG+GGG 0.594343 4_4:-60352581 Msa0692040:five_prime_UTR
CCGGGAAGGTAGCTAGGGTA+CGG 0.595377 4_4:-60352170 Msa0692040:five_prime_UTR
ATTGGAAGCAAGGTTGAAGG+GGG 0.596778 4_4:+60352031 None:intergenic
ACCCATGTTATGAGGAATTG+GGG 0.598942 4_4:+60350740 None:intergenic
AAGTTGAAAGATGCCAACTC+GGG 0.605070 4_4:-60349537 Msa0692040:CDS
CAGACCTGACATTGGAAGCA+AGG 0.608712 4_4:+60352021 None:intergenic
AAATACAAACGGAAGCCACT+GGG 0.608993 4_4:+60348952 None:intergenic
TACATACTAACAAAGCAAGA+AGG 0.610881 4_4:+60348986 None:intergenic
TAAAGGCACTATAAAGTTGG+GGG 0.612334 4_4:-60352580 Msa0692040:five_prime_UTR
CTTGTGCAGCAAATGCCGCA+GGG 0.618158 4_4:+60349196 None:intergenic
AATGAGTACAGACCTGACAT+TGG 0.621004 4_4:+60352013 None:intergenic
ACGCGCCGGGAAGGTAGCTA+GGG 0.621763 4_4:-60352175 Msa0692040:five_prime_UTR
TGAAATTGATGGCTCGTTAG+GGG 0.622534 4_4:-60350537 Msa0692040:CDS
TCAAGGAATGAAAAGTGGAA+GGG 0.625572 4_4:-60348772 Msa0692040:three_prime_UTR
CCTGATTGATGCTGTCCGAA+TGG 0.625819 4_4:-60349586 Msa0692040:CDS
AAGGCCTGCCAAAACCGACA+AGG 0.632388 4_4:-60349616 Msa0692040:CDS
TGACGAGAAACAGAGGCTCA+AGG 0.635039 4_4:-60349295 Msa0692040:CDS
AGGGTAAGTAAGTCCAAACA+AGG 0.647884 4_4:-60352540 Msa0692040:five_prime_UTR
TTGGATCGGATGTTGCACCA+AGG 0.650356 4_4:-60348526 Msa0692040:three_prime_UTR
CGAATGGTGACACAGTTAAG+GGG 0.650749 4_4:-60349570 Msa0692040:CDS
GAGGTATCCACTGCAGCAGG+TGG 0.651341 4_4:+60349105 None:intergenic
AACTTCGTGACGAGAAACAG+AGG 0.668282 4_4:-60349302 Msa0692040:CDS
CACTGTGGTCCAGAGCGTGG+AGG 0.668517 4_4:+60348615 None:intergenic
TCGGACAGCATCAATCAGGA+TGG 0.668544 4_4:+60349590 None:intergenic
TTCGGTTCGTGTGAGTACAA+GGG 0.674407 4_4:+60348715 None:intergenic
GTGCTTGGGTCACTATTGTG+AGG 0.676661 4_4:-60348586 Msa0692040:three_prime_UTR
AAGGTAGCTAGGGTACGGAA+TGG 0.683184 4_4:-60352165 Msa0692040:exon
GTTATCCAGGAGTTGCAATG+TGG 0.686227 4_4:-60349137 Msa0692040:CDS
AGGCAAACGATAATCTAGTG+AGG 0.695421 4_4:-60348856 Msa0692040:three_prime_UTR
GAGCCAGCTTAGGCAACTGG+AGG 0.695906 4_4:+60349063 None:intergenic
TGTATTCTAACTGGACCCAG+TGG 0.707527 4_4:-60348967 Msa0692040:three_prime_UTR
TTGGAAGCAAGGTTGAAGGG+GGG 0.709273 4_4:+60352032 None:intergenic
AAAGGCACTATAAAGTTGGG+GGG 0.718000 4_4:-60352579 Msa0692040:five_prime_UTR
GGGGTAGGCAAGAAACTAGG+TGG 0.721390 4_4:+60349228 None:intergenic
CAGATATGTACCGAGATGTG+TGG 0.730683 4_4:-60348690 Msa0692040:three_prime_UTR
ACGAAGTACATGATCCTGTG+AGG 0.733239 4_4:+60349086 None:intergenic
CCCAAGCACCATGAGCACTG+TGG 0.763050 4_4:+60348600 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATATAGTACTATTAATT+TGG + chr4_4:60348752-60348771 None:intergenic 10.0%
!! TATAATGAAAATTATTTCAA+TGG - chr4_4:60349662-60349681 Msa0692040:intron 10.0%
!! TTTAAGAAATAAAAATTGAA+GGG + chr4_4:60351715-60351734 None:intergenic 10.0%
!!! TTTTAAGAAATAAAAATTGA+AGG + chr4_4:60351716-60351735 None:intergenic 10.0%
!!! ATTATTTAAGTATTTTATTC+AGG + chr4_4:60352567-60352586 None:intergenic 10.0%
!! AAATACTTAAATAATACATT+TGG - chr4_4:60352572-60352591 Msa0692040:five_prime_UTR 10.0%
!! TTAATATAGTACTATTAATT+TGG + chr4_4:60348752-60348771 None:intergenic 10.0%
!! TATAATGAAAATTATTTCAA+TGG - chr4_4:60349662-60349681 Msa0692040:intron 10.0%
!! TTTAAGAAATAAAAATTGAA+GGG + chr4_4:60351715-60351734 None:intergenic 10.0%
!!! TTTTAAGAAATAAAAATTGA+AGG + chr4_4:60351716-60351735 None:intergenic 10.0%
!!! ATTATTTAAGTATTTTATTC+AGG + chr4_4:60352567-60352586 None:intergenic 10.0%
!! AAATACTTAAATAATACATT+TGG - chr4_4:60352572-60352591 Msa0692040:five_prime_UTR 10.0%
!! ATAAATCTCAAATTATCATA+AGG + chr4_4:60349271-60349290 None:intergenic 15.0%
!! ACTTCATATTTACAAATTAT+AGG + chr4_4:60349535-60349554 None:intergenic 15.0%
!! AAAGAATGCATTATTTAAAA+TGG + chr4_4:60350113-60350132 None:intergenic 15.0%
!!! TATTTTTCTTTACCTAAAAA+AGG - chr4_4:60350712-60350731 Msa0692040:CDS 15.0%
!! GTATTAAAAAACAAATTTCT+AGG - chr4_4:60351780-60351799 Msa0692040:intron 15.0%
!!! CAATAATTTTTTCTTGTTTT+TGG - chr4_4:60352288-60352307 Msa0692040:five_prime_UTR 15.0%
!! ATAAATCTCAAATTATCATA+AGG + chr4_4:60349271-60349290 None:intergenic 15.0%
!! ACTTCATATTTACAAATTAT+AGG + chr4_4:60349535-60349554 None:intergenic 15.0%
!! AAAGAATGCATTATTTAAAA+TGG + chr4_4:60350113-60350132 None:intergenic 15.0%
!!! TATTTTTCTTTACCTAAAAA+AGG - chr4_4:60350712-60350731 Msa0692040:CDS 15.0%
!! GTATTAAAAAACAAATTTCT+AGG - chr4_4:60351780-60351799 Msa0692040:intron 15.0%
!!! CAATAATTTTTTCTTGTTTT+TGG - chr4_4:60352288-60352307 Msa0692040:five_prime_UTR 15.0%
!! GAAAAGAAAAGAAAAGAAAA+GGG + chr4_4:60348717-60348736 None:intergenic 20.0%
!! AGAAAAGAAAAGAAAAGAAA+AGG + chr4_4:60348718-60348737 None:intergenic 20.0%
!! TTAAAACCCTAATTATGAAA+CGG + chr4_4:60349142-60349161 None:intergenic 20.0%
!!! TTTCATAATTAGGGTTTTAA+TGG - chr4_4:60349142-60349161 Msa0692040:CDS 20.0%
!!! ATTTTTTGTTTCTTACTTCA+CGG - chr4_4:60349210-60349229 Msa0692040:CDS 20.0%
!! ATGTTGAATTGATAGAATAT+TGG - chr4_4:60349345-60349364 Msa0692040:intron 20.0%
!!! TGTTTTCATAACAGTTATAT+AGG + chr4_4:60349583-60349602 None:intergenic 20.0%
!! AAAATTATTTCAATGGAAGT+TGG - chr4_4:60349669-60349688 Msa0692040:intron 20.0%
!! TAGGTAAAACTATTTAGAAA+AGG + chr4_4:60349847-60349866 None:intergenic 20.0%
!!! AAATAGTTTTACCTAAAACT+TGG - chr4_4:60349852-60349871 Msa0692040:intron 20.0%
!! ATTTGCATTATGGTATTTAT+AGG - chr4_4:60350467-60350486 Msa0692040:intron 20.0%
!!! AATTGTTTAGTTCAATGAAA+GGG + chr4_4:60350667-60350686 None:intergenic 20.0%
!!! AAATTGTTTAGTTCAATGAA+AGG + chr4_4:60350668-60350687 None:intergenic 20.0%
!! AGAATAAAGATAACATGTAT+AGG - chr4_4:60350751-60350770 Msa0692040:CDS 20.0%
!! CAAGTAAAACAAAACATATT+GGG + chr4_4:60350825-60350844 None:intergenic 20.0%
!! ACAAGTAAAACAAAACATAT+TGG + chr4_4:60350826-60350845 None:intergenic 20.0%
!! AATCATTATTGTAGTATACA+TGG + chr4_4:60350909-60350928 None:intergenic 20.0%
!! ATGTATACTACAATAATGAT+TGG - chr4_4:60350908-60350927 Msa0692040:intron 20.0%
!! AATTGCACTAATAATTAAGT+TGG + chr4_4:60351049-60351068 None:intergenic 20.0%
!! AAACTACAAGGAAAAATTAA+TGG + chr4_4:60351143-60351162 None:intergenic 20.0%
!!! TTTTTCCTTGTAGTTTTTTT+AGG - chr4_4:60351147-60351166 Msa0692040:intron 20.0%
!! CTAACAATGTTCATTATATT+AGG + chr4_4:60351448-60351467 None:intergenic 20.0%
!! CTAATATAATGAACATTGTT+AGG - chr4_4:60351446-60351465 Msa0692040:intron 20.0%
!! AGAAAAGATTAAAGAGTTAA+AGG - chr4_4:60351609-60351628 Msa0692040:intron 20.0%
!! TACAAATGTTTAAACAATCA+AGG - chr4_4:60352328-60352347 Msa0692040:five_prime_UTR 20.0%
!!! TTTAAGTATTTTATTCAGGT+AGG + chr4_4:60352563-60352582 None:intergenic 20.0%
!! CTTAAATAATACATTTGGAT+CGG - chr4_4:60352577-60352596 Msa0692040:five_prime_UTR 20.0%
!! GAAAAGAAAAGAAAAGAAAA+GGG + chr4_4:60348717-60348736 None:intergenic 20.0%
!! AGAAAAGAAAAGAAAAGAAA+AGG + chr4_4:60348718-60348737 None:intergenic 20.0%
!! TTAAAACCCTAATTATGAAA+CGG + chr4_4:60349142-60349161 None:intergenic 20.0%
!!! TTTCATAATTAGGGTTTTAA+TGG - chr4_4:60349142-60349161 Msa0692040:CDS 20.0%
!!! ATTTTTTGTTTCTTACTTCA+CGG - chr4_4:60349210-60349229 Msa0692040:CDS 20.0%
!! ATGTTGAATTGATAGAATAT+TGG - chr4_4:60349345-60349364 Msa0692040:intron 20.0%
!!! TGTTTTCATAACAGTTATAT+AGG + chr4_4:60349583-60349602 None:intergenic 20.0%
!! AAAATTATTTCAATGGAAGT+TGG - chr4_4:60349669-60349688 Msa0692040:intron 20.0%
!! TAGGTAAAACTATTTAGAAA+AGG + chr4_4:60349847-60349866 None:intergenic 20.0%
!!! AAATAGTTTTACCTAAAACT+TGG - chr4_4:60349852-60349871 Msa0692040:intron 20.0%
!! ATTTGCATTATGGTATTTAT+AGG - chr4_4:60350467-60350486 Msa0692040:intron 20.0%
!!! AATTGTTTAGTTCAATGAAA+GGG + chr4_4:60350667-60350686 None:intergenic 20.0%
!!! AAATTGTTTAGTTCAATGAA+AGG + chr4_4:60350668-60350687 None:intergenic 20.0%
!! AGAATAAAGATAACATGTAT+AGG - chr4_4:60350751-60350770 Msa0692040:CDS 20.0%
!! CAAGTAAAACAAAACATATT+GGG + chr4_4:60350825-60350844 None:intergenic 20.0%
!! ACAAGTAAAACAAAACATAT+TGG + chr4_4:60350826-60350845 None:intergenic 20.0%
!! AATCATTATTGTAGTATACA+TGG + chr4_4:60350909-60350928 None:intergenic 20.0%
!! ATGTATACTACAATAATGAT+TGG - chr4_4:60350908-60350927 Msa0692040:intron 20.0%
!! AATTGCACTAATAATTAAGT+TGG + chr4_4:60351049-60351068 None:intergenic 20.0%
!! AAACTACAAGGAAAAATTAA+TGG + chr4_4:60351143-60351162 None:intergenic 20.0%
!!! TTTTTCCTTGTAGTTTTTTT+AGG - chr4_4:60351147-60351166 Msa0692040:intron 20.0%
!! CTAACAATGTTCATTATATT+AGG + chr4_4:60351448-60351467 None:intergenic 20.0%
!! CTAATATAATGAACATTGTT+AGG - chr4_4:60351446-60351465 Msa0692040:intron 20.0%
!! AGAAAAGATTAAAGAGTTAA+AGG - chr4_4:60351609-60351628 Msa0692040:intron 20.0%
!! TACAAATGTTTAAACAATCA+AGG - chr4_4:60352328-60352347 Msa0692040:five_prime_UTR 20.0%
!!! TTTAAGTATTTTATTCAGGT+AGG + chr4_4:60352563-60352582 None:intergenic 20.0%
!! CTTAAATAATACATTTGGAT+CGG - chr4_4:60352577-60352596 Msa0692040:five_prime_UTR 20.0%
! AGAATAGAAAGAATGAGATT+GGG + chr4_4:60348668-60348687 None:intergenic 25.0%
!! GTACTATTAATTTGGTTTCT+GGG + chr4_4:60348744-60348763 None:intergenic 25.0%
!! AGTACTATTAATTTGGTTTC+TGG + chr4_4:60348745-60348764 None:intergenic 25.0%
!!! TGATTTTGATTTTGAGAATG+AGG + chr4_4:60348901-60348920 None:intergenic 25.0%
! TAAAACCCTAATTATGAAAC+GGG + chr4_4:60349141-60349160 None:intergenic 25.0%
!!! TTTTTTGTTTCTTACTTCAC+GGG - chr4_4:60349211-60349230 Msa0692040:CDS 25.0%
! AAATAATCAAACCATGCAAA+TGG + chr4_4:60349453-60349472 None:intergenic 25.0%
! TACAAGTAAGTTTCAACAAT+AGG + chr4_4:60349710-60349729 None:intergenic 25.0%
! AATAGAGGATATTTGAATTC+AGG - chr4_4:60349791-60349810 Msa0692040:CDS 25.0%
! ATAGAGGATATTTGAATTCA+GGG - chr4_4:60349792-60349811 Msa0692040:CDS 25.0%
!! TTAGAAAAGGTTTTTCTTGA+TGG + chr4_4:60349834-60349853 None:intergenic 25.0%
!! CAAATATACAAGTTTTGCAA+AGG + chr4_4:60350167-60350186 None:intergenic 25.0%
! AAACTTGTATATTTGTGATG+AGG - chr4_4:60350172-60350191 Msa0692040:intron 25.0%
! ACTACACTACTAAAAAATCT+GGG + chr4_4:60350257-60350276 None:intergenic 25.0%
! TATCCTCTTGATATAAAACA+TGG + chr4_4:60350434-60350453 None:intergenic 25.0%
!! ATGTTTTATATCAAGAGGAT+AGG - chr4_4:60350433-60350452 Msa0692040:intron 25.0%
!! TGTTTTATATCAAGAGGATA+GGG - chr4_4:60350434-60350453 Msa0692040:intron 25.0%
! GATTAGAACAATTTGCATTA+TGG - chr4_4:60350457-60350476 Msa0692040:intron 25.0%
! TGACATGTAAATTCATATAG+AGG + chr4_4:60350499-60350518 None:intergenic 25.0%
! ATCTCCTAAAGATTTAAACA+GGG + chr4_4:60350862-60350881 None:intergenic 25.0%
! AATCTCCTAAAGATTTAAAC+AGG + chr4_4:60350863-60350882 None:intergenic 25.0%
! TAGTATACATGGAAAGAAAA+CGG + chr4_4:60350898-60350917 None:intergenic 25.0%
! ATTGTTAGGTTTATTGAACT+AGG - chr4_4:60351460-60351479 Msa0692040:intron 25.0%
! GTGAAGTCTCAATTTATATT+CGG - chr4_4:60351631-60351650 Msa0692040:intron 25.0%
! TGAAGTCTCAATTTATATTC+GGG - chr4_4:60351632-60351651 Msa0692040:intron 25.0%
! TTTCTTTGTAAATTTGCATG+TGG - chr4_4:60351659-60351678 Msa0692040:intron 25.0%
!! TGAGTTTTTCATTCAACAAT+AGG + chr4_4:60351751-60351770 None:intergenic 25.0%
! TTGTTAGTATGTATTCTAAC+TGG - chr4_4:60352141-60352160 Msa0692040:CDS 25.0%
! ATTCATAAGCCAAATACAAA+CGG + chr4_4:60352179-60352198 None:intergenic 25.0%
! GAATACTTCTGAATTAATTC+TGG - chr4_4:60352195-60352214 Msa0692040:five_prime_UTR 25.0%
! AGAATAGAAAGAATGAGATT+GGG + chr4_4:60348668-60348687 None:intergenic 25.0%
!! GTACTATTAATTTGGTTTCT+GGG + chr4_4:60348744-60348763 None:intergenic 25.0%
!! AGTACTATTAATTTGGTTTC+TGG + chr4_4:60348745-60348764 None:intergenic 25.0%
!!! TGATTTTGATTTTGAGAATG+AGG + chr4_4:60348901-60348920 None:intergenic 25.0%
! TAAAACCCTAATTATGAAAC+GGG + chr4_4:60349141-60349160 None:intergenic 25.0%
!!! TTTTTTGTTTCTTACTTCAC+GGG - chr4_4:60349211-60349230 Msa0692040:CDS 25.0%
! AAATAATCAAACCATGCAAA+TGG + chr4_4:60349453-60349472 None:intergenic 25.0%
! TACAAGTAAGTTTCAACAAT+AGG + chr4_4:60349710-60349729 None:intergenic 25.0%
! AATAGAGGATATTTGAATTC+AGG - chr4_4:60349791-60349810 Msa0692040:CDS 25.0%
! ATAGAGGATATTTGAATTCA+GGG - chr4_4:60349792-60349811 Msa0692040:CDS 25.0%
!! TTAGAAAAGGTTTTTCTTGA+TGG + chr4_4:60349834-60349853 None:intergenic 25.0%
!! CAAATATACAAGTTTTGCAA+AGG + chr4_4:60350167-60350186 None:intergenic 25.0%
! AAACTTGTATATTTGTGATG+AGG - chr4_4:60350172-60350191 Msa0692040:intron 25.0%
! ACTACACTACTAAAAAATCT+GGG + chr4_4:60350257-60350276 None:intergenic 25.0%
! TATCCTCTTGATATAAAACA+TGG + chr4_4:60350434-60350453 None:intergenic 25.0%
!! ATGTTTTATATCAAGAGGAT+AGG - chr4_4:60350433-60350452 Msa0692040:intron 25.0%
!! TGTTTTATATCAAGAGGATA+GGG - chr4_4:60350434-60350453 Msa0692040:intron 25.0%
! GATTAGAACAATTTGCATTA+TGG - chr4_4:60350457-60350476 Msa0692040:intron 25.0%
! TGACATGTAAATTCATATAG+AGG + chr4_4:60350499-60350518 None:intergenic 25.0%
! ATCTCCTAAAGATTTAAACA+GGG + chr4_4:60350862-60350881 None:intergenic 25.0%
! AATCTCCTAAAGATTTAAAC+AGG + chr4_4:60350863-60350882 None:intergenic 25.0%
! TAGTATACATGGAAAGAAAA+CGG + chr4_4:60350898-60350917 None:intergenic 25.0%
! ATTGTTAGGTTTATTGAACT+AGG - chr4_4:60351460-60351479 Msa0692040:intron 25.0%
! GTGAAGTCTCAATTTATATT+CGG - chr4_4:60351631-60351650 Msa0692040:intron 25.0%
! TGAAGTCTCAATTTATATTC+GGG - chr4_4:60351632-60351651 Msa0692040:intron 25.0%
! TTTCTTTGTAAATTTGCATG+TGG - chr4_4:60351659-60351678 Msa0692040:intron 25.0%
!! TGAGTTTTTCATTCAACAAT+AGG + chr4_4:60351751-60351770 None:intergenic 25.0%
! TTGTTAGTATGTATTCTAAC+TGG - chr4_4:60352141-60352160 Msa0692040:CDS 25.0%
! ATTCATAAGCCAAATACAAA+CGG + chr4_4:60352179-60352198 None:intergenic 25.0%
! GAATACTTCTGAATTAATTC+TGG - chr4_4:60352195-60352214 Msa0692040:five_prime_UTR 25.0%
!! AAGTAAAGGCACTATAAAGT+TGG - chr4_4:60348534-60348553 Msa0692040:three_prime_UTR 30.0%
!! AGTAAAGGCACTATAAAGTT+GGG - chr4_4:60348535-60348554 Msa0692040:three_prime_UTR 30.0%
!! GGGTTGGTAAGTTTATAAAA+GGG - chr4_4:60348558-60348577 Msa0692040:three_prime_UTR 30.0%
GAGAATAGAAAGAATGAGAT+TGG + chr4_4:60348669-60348688 None:intergenic 30.0%
AGAAAAGAAAAGAAAAGGGT+GGG + chr4_4:60348713-60348732 None:intergenic 30.0%
AAGAAAAGAAAAGAAAAGGG+TGG + chr4_4:60348714-60348733 None:intergenic 30.0%
!! TTGATTTTGAGAATGAGGTT+CGG + chr4_4:60348896-60348915 None:intergenic 30.0%
ACGAATTGGATTAACGATTA+CGG - chr4_4:60348989-60349008 Msa0692040:three_prime_UTR 30.0%
AAAACCCTAATTATGAAACG+GGG + chr4_4:60349140-60349159 None:intergenic 30.0%
GATTATAGTACACTAGTATC+TGG + chr4_4:60349395-60349414 None:intergenic 30.0%
!!! CTAAGTTCTCTACTAGTTTT+AGG - chr4_4:60349426-60349445 Msa0692040:intron 30.0%
TGATGCTTAGAATCTTTGAT+CGG - chr4_4:60349756-60349775 Msa0692040:CDS 30.0%
TATAGATCATCTGATCCATT+GGG + chr4_4:60349890-60349909 None:intergenic 30.0%
ATATAGATCATCTGATCCAT+TGG + chr4_4:60349891-60349910 None:intergenic 30.0%
CAATTCTATCTAGTGAGATA+GGG - chr4_4:60349916-60349935 Msa0692040:intron 30.0%
AATTCTATCTAGTGAGATAG+GGG - chr4_4:60349917-60349936 Msa0692040:intron 30.0%
! TCCAAAAATGCAATTTTCCA+TGG - chr4_4:60349955-60349974 Msa0692040:intron 30.0%
! TCCATGGAAAATTGCATTTT+TGG + chr4_4:60349959-60349978 None:intergenic 30.0%
! AAAAATGCAATTTTCCATGG+AGG - chr4_4:60349958-60349977 Msa0692040:intron 30.0%
!!! GTTCCTTGACAATGTTTTTT+AGG - chr4_4:60350054-60350073 Msa0692040:intron 30.0%
TTGCACAAACAAAACAAACT+AGG + chr4_4:60350198-60350217 None:intergenic 30.0%
!!! AGTTTGTTTTGTTTGTGCAA+TGG - chr4_4:60350198-60350217 Msa0692040:intron 30.0%
CACTACACTACTAAAAAATC+TGG + chr4_4:60350258-60350277 None:intergenic 30.0%
!!! CAGATTTTTTAGTAGTGTAG+TGG - chr4_4:60350256-60350275 Msa0692040:intron 30.0%
! GTTTTATATCAAGAGGATAG+GGG - chr4_4:60350435-60350454 Msa0692040:intron 30.0%
TACTCCCTGTTTAAATCTTT+AGG - chr4_4:60350855-60350874 Msa0692040:intron 30.0%
ACTCCAGAAATCATATCATA+GGG - chr4_4:60351252-60351271 Msa0692040:intron 30.0%
TCTTGTTAATTTCTTGTTGC+AGG - chr4_4:60351292-60351311 Msa0692040:intron 30.0%
CTTGTTAATTTCTTGTTGCA+GGG - chr4_4:60351293-60351312 Msa0692040:intron 30.0%
ACTCCTGGATAACTAATAAA+GGG + chr4_4:60351973-60351992 None:intergenic 30.0%
AACTCCTGGATAACTAATAA+AGG + chr4_4:60351974-60351993 None:intergenic 30.0%
GATACAATCTTGAGCTAAAA+TGG + chr4_4:60352099-60352118 None:intergenic 30.0%
TACATACTAACAAAGCAAGA+AGG + chr4_4:60352134-60352153 None:intergenic 30.0%
AACAATCAAGGAATGAAAAG+TGG - chr4_4:60352340-60352359 Msa0692040:five_prime_UTR 30.0%
!!! GGGTGTTTTTGTTTTAAACT+TGG - chr4_4:60352365-60352384 Msa0692040:five_prime_UTR 30.0%
CATATGGTATGTTGTTGATA+TGG - chr4_4:60352460-60352479 Msa0692040:five_prime_UTR 30.0%
!! AAGTAAAGGCACTATAAAGT+TGG - chr4_4:60348534-60348553 Msa0692040:three_prime_UTR 30.0%
!! AGTAAAGGCACTATAAAGTT+GGG - chr4_4:60348535-60348554 Msa0692040:three_prime_UTR 30.0%
!! GGGTTGGTAAGTTTATAAAA+GGG - chr4_4:60348558-60348577 Msa0692040:three_prime_UTR 30.0%
GAGAATAGAAAGAATGAGAT+TGG + chr4_4:60348669-60348688 None:intergenic 30.0%
AGAAAAGAAAAGAAAAGGGT+GGG + chr4_4:60348713-60348732 None:intergenic 30.0%
AAGAAAAGAAAAGAAAAGGG+TGG + chr4_4:60348714-60348733 None:intergenic 30.0%
!! TTGATTTTGAGAATGAGGTT+CGG + chr4_4:60348896-60348915 None:intergenic 30.0%
ACGAATTGGATTAACGATTA+CGG - chr4_4:60348989-60349008 Msa0692040:three_prime_UTR 30.0%
AAAACCCTAATTATGAAACG+GGG + chr4_4:60349140-60349159 None:intergenic 30.0%
GATTATAGTACACTAGTATC+TGG + chr4_4:60349395-60349414 None:intergenic 30.0%
!!! CTAAGTTCTCTACTAGTTTT+AGG - chr4_4:60349426-60349445 Msa0692040:intron 30.0%
TGATGCTTAGAATCTTTGAT+CGG - chr4_4:60349756-60349775 Msa0692040:CDS 30.0%
TATAGATCATCTGATCCATT+GGG + chr4_4:60349890-60349909 None:intergenic 30.0%
ATATAGATCATCTGATCCAT+TGG + chr4_4:60349891-60349910 None:intergenic 30.0%
CAATTCTATCTAGTGAGATA+GGG - chr4_4:60349916-60349935 Msa0692040:intron 30.0%
AATTCTATCTAGTGAGATAG+GGG - chr4_4:60349917-60349936 Msa0692040:intron 30.0%
! TCCAAAAATGCAATTTTCCA+TGG - chr4_4:60349955-60349974 Msa0692040:intron 30.0%
! TCCATGGAAAATTGCATTTT+TGG + chr4_4:60349959-60349978 None:intergenic 30.0%
! AAAAATGCAATTTTCCATGG+AGG - chr4_4:60349958-60349977 Msa0692040:intron 30.0%
!!! GTTCCTTGACAATGTTTTTT+AGG - chr4_4:60350054-60350073 Msa0692040:intron 30.0%
TTGCACAAACAAAACAAACT+AGG + chr4_4:60350198-60350217 None:intergenic 30.0%
!!! AGTTTGTTTTGTTTGTGCAA+TGG - chr4_4:60350198-60350217 Msa0692040:intron 30.0%
CACTACACTACTAAAAAATC+TGG + chr4_4:60350258-60350277 None:intergenic 30.0%
!!! CAGATTTTTTAGTAGTGTAG+TGG - chr4_4:60350256-60350275 Msa0692040:intron 30.0%
! GTTTTATATCAAGAGGATAG+GGG - chr4_4:60350435-60350454 Msa0692040:intron 30.0%
TACTCCCTGTTTAAATCTTT+AGG - chr4_4:60350855-60350874 Msa0692040:intron 30.0%
ACTCCAGAAATCATATCATA+GGG - chr4_4:60351252-60351271 Msa0692040:intron 30.0%
TCTTGTTAATTTCTTGTTGC+AGG - chr4_4:60351292-60351311 Msa0692040:intron 30.0%
CTTGTTAATTTCTTGTTGCA+GGG - chr4_4:60351293-60351312 Msa0692040:intron 30.0%
ACTCCTGGATAACTAATAAA+GGG + chr4_4:60351973-60351992 None:intergenic 30.0%
AACTCCTGGATAACTAATAA+AGG + chr4_4:60351974-60351993 None:intergenic 30.0%
GATACAATCTTGAGCTAAAA+TGG + chr4_4:60352099-60352118 None:intergenic 30.0%
TACATACTAACAAAGCAAGA+AGG + chr4_4:60352134-60352153 None:intergenic 30.0%
AACAATCAAGGAATGAAAAG+TGG - chr4_4:60352340-60352359 Msa0692040:five_prime_UTR 30.0%
!!! GGGTGTTTTTGTTTTAAACT+TGG - chr4_4:60352365-60352384 Msa0692040:five_prime_UTR 30.0%
CATATGGTATGTTGTTGATA+TGG - chr4_4:60352460-60352479 Msa0692040:five_prime_UTR 30.0%
!! GTAAAGGCACTATAAAGTTG+GGG - chr4_4:60348536-60348555 Msa0692040:three_prime_UTR 35.0%
!! TAAAGGCACTATAAAGTTGG+GGG - chr4_4:60348537-60348556 Msa0692040:three_prime_UTR 35.0%
!! GGGGTTGGTAAGTTTATAAA+AGG - chr4_4:60348557-60348576 Msa0692040:three_prime_UTR 35.0%
CTACCACAAATCAACTGTTT+CGG + chr4_4:60348606-60348625 None:intergenic 35.0%
AAAAGAAAAGAAAAGGGTGG+GGG + chr4_4:60348711-60348730 None:intergenic 35.0%
GAAAAGAAAAGAAAAGGGTG+GGG + chr4_4:60348712-60348731 None:intergenic 35.0%
AACGAAGAAGGTGAAAAAGA+GGG + chr4_4:60348838-60348857 None:intergenic 35.0%
GAATTGGGAATTGAGAAGAA+AGG + chr4_4:60348861-60348880 None:intergenic 35.0%
! TAATCCAATTCGTGTTTTCC+CGG + chr4_4:60348982-60349001 None:intergenic 35.0%
AAACCCTAATTATGAAACGG+GGG + chr4_4:60349139-60349158 None:intergenic 35.0%
CTAGTAGAGAACTTAGTGTT+AGG + chr4_4:60349422-60349441 None:intergenic 35.0%
!!! TAGTTTTAGGTCCATTTGCA+TGG - chr4_4:60349439-60349458 Msa0692040:intron 35.0%
AACAAGAAAGAATGTTGAGG+TGG - chr4_4:60349618-60349637 Msa0692040:CDS 35.0%
AGAATCTTTGATCGGAAAAG+CGG - chr4_4:60349764-60349783 Msa0692040:CDS 35.0%
GATATTTGAATTCAGGGTAG+AGG - chr4_4:60349798-60349817 Msa0692040:CDS 35.0%
CTAAAACTTGGTTTCTGCTA+GGG - chr4_4:60349864-60349883 Msa0692040:intron 35.0%
CCTATCTCACTAGATAGAAT+TGG + chr4_4:60349918-60349937 None:intergenic 35.0%
CCAATTCTATCTAGTGAGAT+AGG - chr4_4:60349915-60349934 Msa0692040:intron 35.0%
!!! CCTTGACAATGTTTTTTAGG+CGG - chr4_4:60350057-60350076 Msa0692040:intron 35.0%
!!! CTTGACAATGTTTTTTAGGC+GGG - chr4_4:60350058-60350077 Msa0692040:intron 35.0%
TGGAGTAGAAAATGAATTGC+TGG - chr4_4:60350218-60350237 Msa0692040:intron 35.0%
TAGTAGTGTAGTGGTTTGAA+TGG - chr4_4:60350265-60350284 Msa0692040:intron 35.0%
TACCCATGTTATGAGGAATT+GGG + chr4_4:60350381-60350400 None:intergenic 35.0%
ACAAATGTACCCATGTTATG+AGG + chr4_4:60350388-60350407 None:intergenic 35.0%
TCATAACATGGGTACATTTG+TGG - chr4_4:60350387-60350406 Msa0692040:intron 35.0%
! GCACCATGTTTTATATCAAG+AGG - chr4_4:60350428-60350447 Msa0692040:intron 35.0%
! GTTTAGTTCAATGAAAGGGA+AGG + chr4_4:60350663-60350682 None:intergenic 35.0%
GATTGGAGACTGAGATTAAA+AGG - chr4_4:60350925-60350944 Msa0692040:intron 35.0%
ACTAGACATCTGTTAGTTGA+AGG + chr4_4:60351014-60351033 None:intergenic 35.0%
AATCAAGATGACAAGTCCTA+AGG - chr4_4:60351088-60351107 Msa0692040:intron 35.0%
! GTTGGCCTAAAAAAACTACA+AGG + chr4_4:60351155-60351174 None:intergenic 35.0%
!!! GTTTTTTTAGGCCAACTTTC+CGG - chr4_4:60351159-60351178 Msa0692040:intron 35.0%
AGTAGTCAATGCTACAAGAT+GGG + chr4_4:60351196-60351215 None:intergenic 35.0%
TATTCAAACCCCAAAATGAC+TGG - chr4_4:60351225-60351244 Msa0692040:intron 35.0%
CACTCCAGAAATCATATCAT+AGG - chr4_4:60351251-60351270 Msa0692040:intron 35.0%
CTCCAGAAATCATATCATAG+GGG - chr4_4:60351253-60351272 Msa0692040:intron 35.0%
TCCAGAAATCATATCATAGG+GGG - chr4_4:60351254-60351273 Msa0692040:intron 35.0%
ATATGGACACAAAAGCAACA+AGG + chr4_4:60351409-60351428 None:intergenic 35.0%
! GTTGGCATCTTTCAACTTTT+GGG + chr4_4:60351578-60351597 None:intergenic 35.0%
! AGTTGGCATCTTTCAACTTT+TGG + chr4_4:60351579-60351598 None:intergenic 35.0%
AAAGTTGAAAGATGCCAACT+CGG - chr4_4:60351579-60351598 Msa0692040:intron 35.0%
GTACCCTTTATTAGTTATCC+AGG - chr4_4:60351967-60351986 Msa0692040:intron 35.0%
! CTAACAAAGCAAGAAGGTAT+TGG + chr4_4:60352128-60352147 None:intergenic 35.0%
!! GTTTCGTATCAGTTTTAGTG+AGG - chr4_4:60352241-60352260 Msa0692040:five_prime_UTR 35.0%
!!! CTTGTTTTTGGCTTGCAAAA+CGG - chr4_4:60352300-60352319 Msa0692040:five_prime_UTR 35.0%
!!! TTGTTTTTGGCTTGCAAAAC+GGG - chr4_4:60352301-60352320 Msa0692040:five_prime_UTR 35.0%
ATCAAGGAATGAAAAGTGGA+AGG - chr4_4:60352344-60352363 Msa0692040:five_prime_UTR 35.0%
TCAAGGAATGAAAAGTGGAA+GGG - chr4_4:60352345-60352364 Msa0692040:five_prime_UTR 35.0%
TCTCGGTACATATCTGAATT+CGG + chr4_4:60352423-60352442 None:intergenic 35.0%
!! GTAAAGGCACTATAAAGTTG+GGG - chr4_4:60348536-60348555 Msa0692040:three_prime_UTR 35.0%
!! TAAAGGCACTATAAAGTTGG+GGG - chr4_4:60348537-60348556 Msa0692040:three_prime_UTR 35.0%
!! GGGGTTGGTAAGTTTATAAA+AGG - chr4_4:60348557-60348576 Msa0692040:three_prime_UTR 35.0%
CTACCACAAATCAACTGTTT+CGG + chr4_4:60348606-60348625 None:intergenic 35.0%
AAAAGAAAAGAAAAGGGTGG+GGG + chr4_4:60348711-60348730 None:intergenic 35.0%
GAAAAGAAAAGAAAAGGGTG+GGG + chr4_4:60348712-60348731 None:intergenic 35.0%
AACGAAGAAGGTGAAAAAGA+GGG + chr4_4:60348838-60348857 None:intergenic 35.0%
GAATTGGGAATTGAGAAGAA+AGG + chr4_4:60348861-60348880 None:intergenic 35.0%
! TAATCCAATTCGTGTTTTCC+CGG + chr4_4:60348982-60349001 None:intergenic 35.0%
AAACCCTAATTATGAAACGG+GGG + chr4_4:60349139-60349158 None:intergenic 35.0%
CTAGTAGAGAACTTAGTGTT+AGG + chr4_4:60349422-60349441 None:intergenic 35.0%
!!! TAGTTTTAGGTCCATTTGCA+TGG - chr4_4:60349439-60349458 Msa0692040:intron 35.0%
AACAAGAAAGAATGTTGAGG+TGG - chr4_4:60349618-60349637 Msa0692040:CDS 35.0%
AGAATCTTTGATCGGAAAAG+CGG - chr4_4:60349764-60349783 Msa0692040:CDS 35.0%
GATATTTGAATTCAGGGTAG+AGG - chr4_4:60349798-60349817 Msa0692040:CDS 35.0%
CTAAAACTTGGTTTCTGCTA+GGG - chr4_4:60349864-60349883 Msa0692040:intron 35.0%
CCTATCTCACTAGATAGAAT+TGG + chr4_4:60349918-60349937 None:intergenic 35.0%
CCAATTCTATCTAGTGAGAT+AGG - chr4_4:60349915-60349934 Msa0692040:intron 35.0%
!!! CCTTGACAATGTTTTTTAGG+CGG - chr4_4:60350057-60350076 Msa0692040:intron 35.0%
!!! CTTGACAATGTTTTTTAGGC+GGG - chr4_4:60350058-60350077 Msa0692040:intron 35.0%
TGGAGTAGAAAATGAATTGC+TGG - chr4_4:60350218-60350237 Msa0692040:intron 35.0%
TAGTAGTGTAGTGGTTTGAA+TGG - chr4_4:60350265-60350284 Msa0692040:intron 35.0%
TACCCATGTTATGAGGAATT+GGG + chr4_4:60350381-60350400 None:intergenic 35.0%
ACAAATGTACCCATGTTATG+AGG + chr4_4:60350388-60350407 None:intergenic 35.0%
TCATAACATGGGTACATTTG+TGG - chr4_4:60350387-60350406 Msa0692040:intron 35.0%
! GCACCATGTTTTATATCAAG+AGG - chr4_4:60350428-60350447 Msa0692040:intron 35.0%
! GTTTAGTTCAATGAAAGGGA+AGG + chr4_4:60350663-60350682 None:intergenic 35.0%
GATTGGAGACTGAGATTAAA+AGG - chr4_4:60350925-60350944 Msa0692040:intron 35.0%
ACTAGACATCTGTTAGTTGA+AGG + chr4_4:60351014-60351033 None:intergenic 35.0%
AATCAAGATGACAAGTCCTA+AGG - chr4_4:60351088-60351107 Msa0692040:intron 35.0%
! GTTGGCCTAAAAAAACTACA+AGG + chr4_4:60351155-60351174 None:intergenic 35.0%
!!! GTTTTTTTAGGCCAACTTTC+CGG - chr4_4:60351159-60351178 Msa0692040:intron 35.0%
AGTAGTCAATGCTACAAGAT+GGG + chr4_4:60351196-60351215 None:intergenic 35.0%
TATTCAAACCCCAAAATGAC+TGG - chr4_4:60351225-60351244 Msa0692040:intron 35.0%
CACTCCAGAAATCATATCAT+AGG - chr4_4:60351251-60351270 Msa0692040:intron 35.0%
CTCCAGAAATCATATCATAG+GGG - chr4_4:60351253-60351272 Msa0692040:intron 35.0%
TCCAGAAATCATATCATAGG+GGG - chr4_4:60351254-60351273 Msa0692040:intron 35.0%
ATATGGACACAAAAGCAACA+AGG + chr4_4:60351409-60351428 None:intergenic 35.0%
! GTTGGCATCTTTCAACTTTT+GGG + chr4_4:60351578-60351597 None:intergenic 35.0%
! AGTTGGCATCTTTCAACTTT+TGG + chr4_4:60351579-60351598 None:intergenic 35.0%
AAAGTTGAAAGATGCCAACT+CGG - chr4_4:60351579-60351598 Msa0692040:intron 35.0%
GTACCCTTTATTAGTTATCC+AGG - chr4_4:60351967-60351986 Msa0692040:intron 35.0%
! CTAACAAAGCAAGAAGGTAT+TGG + chr4_4:60352128-60352147 None:intergenic 35.0%
!! GTTTCGTATCAGTTTTAGTG+AGG - chr4_4:60352241-60352260 Msa0692040:five_prime_UTR 35.0%
!!! CTTGTTTTTGGCTTGCAAAA+CGG - chr4_4:60352300-60352319 Msa0692040:five_prime_UTR 35.0%
!!! TTGTTTTTGGCTTGCAAAAC+GGG - chr4_4:60352301-60352320 Msa0692040:five_prime_UTR 35.0%
ATCAAGGAATGAAAAGTGGA+AGG - chr4_4:60352344-60352363 Msa0692040:five_prime_UTR 35.0%
TCAAGGAATGAAAAGTGGAA+GGG - chr4_4:60352345-60352364 Msa0692040:five_prime_UTR 35.0%
TCTCGGTACATATCTGAATT+CGG + chr4_4:60352423-60352442 None:intergenic 35.0%
!! AAAGGCACTATAAAGTTGGG+GGG - chr4_4:60348538-60348557 Msa0692040:three_prime_UTR 40.0%
AGGGTAAGTAAGTCCAAACA+AGG - chr4_4:60348577-60348596 Msa0692040:three_prime_UTR 40.0%
ACGAAGAAGGTGAAAAAGAG+GGG + chr4_4:60348837-60348856 None:intergenic 40.0%
GAACGAAGAAGGTGAAAAAG+AGG + chr4_4:60348839-60348858 None:intergenic 40.0%
TGAGAAGAAAGGAACGAAGA+AGG + chr4_4:60348850-60348869 None:intergenic 40.0%
! AATCCAATTCGTGTTTTCCC+GGG + chr4_4:60348981-60349000 None:intergenic 40.0%
ACATTGGAAGCAAGGTTGAA+GGG + chr4_4:60349091-60349110 None:intergenic 40.0%
AATGAGTACAGACCTGACAT+TGG + chr4_4:60349107-60349126 None:intergenic 40.0%
AACCCTAATTATGAAACGGG+GGG + chr4_4:60349138-60349157 None:intergenic 40.0%
! ATAGTCCTCGATTTGTCTCA+TGG - chr4_4:60349475-60349494 Msa0692040:intron 40.0%
GCGAACAAGAAAGAATGTTG+AGG - chr4_4:60349615-60349634 Msa0692040:CDS 40.0%
AGAAAGAATGTTGAGGTGGA+TGG - chr4_4:60349622-60349641 Msa0692040:CDS 40.0%
GAAAGAATGTTGAGGTGGAT+GGG - chr4_4:60349623-60349642 Msa0692040:CDS 40.0%
TTGAATTCAGGGTAGAGGAA+AGG - chr4_4:60349803-60349822 Msa0692040:CDS 40.0%
! CCTAGCAGAAACCAAGTTTT+AGG + chr4_4:60349866-60349885 None:intergenic 40.0%
CCTAAAACTTGGTTTCTGCT+AGG - chr4_4:60349863-60349882 Msa0692040:intron 40.0%
TGTTGACATGTGAATGGGAA+AGG - chr4_4:60349994-60350013 Msa0692040:intron 40.0%
CCGCCTAAAAAACATTGTCA+AGG + chr4_4:60350060-60350079 None:intergenic 40.0%
GTTGAGTATGGGAAACTTAG+TGG - chr4_4:60350082-60350101 Msa0692040:intron 40.0%
TAGTGTAGTGGTTTGAATGG+AGG - chr4_4:60350268-60350287 Msa0692040:intron 40.0%
TTCCCCAATTCCTCATAACA+TGG - chr4_4:60350375-60350394 Msa0692040:intron 40.0%
TCCCCAATTCCTCATAACAT+GGG - chr4_4:60350376-60350395 Msa0692040:intron 40.0%
ACCCATGTTATGAGGAATTG+GGG + chr4_4:60350380-60350399 None:intergenic 40.0%
GTACCCATGTTATGAGGAAT+TGG + chr4_4:60350382-60350401 None:intergenic 40.0%
AACATGGGTACATTTGTGGT+TGG - chr4_4:60350391-60350410 Msa0692040:intron 40.0%
! CTGAAATTGATGGCTCGTTA+GGG - chr4_4:60350579-60350598 Msa0692040:intron 40.0%
! TGAAATTGATGGCTCGTTAG+GGG - chr4_4:60350580-60350599 Msa0692040:intron 40.0%
! AAGAGTCTGGTTCAAAGAAG+AGG - chr4_4:60350618-60350637 Msa0692040:intron 40.0%
TAGTTCAATGAAAGGGAAGG+AGG + chr4_4:60350660-60350679 None:intergenic 40.0%
!!! CACACGCTGATTCCTTTTTT+AGG + chr4_4:60350727-60350746 None:intergenic 40.0%
GATTTAAACAGGGAGTAGCT+AGG + chr4_4:60350852-60350871 None:intergenic 40.0%
CTGAGATTAAAAGGCAGTGT+TGG - chr4_4:60350934-60350953 Msa0692040:intron 40.0%
GATAACATATGCAACGCCTT+AGG + chr4_4:60351107-60351126 None:intergenic 40.0%
GAAAGATAATGCCGGAAAGT+TGG + chr4_4:60351173-60351192 None:intergenic 40.0%
AAGATGGGGAAAGATAATGC+CGG + chr4_4:60351181-60351200 None:intergenic 40.0%
GTAGTCAATGCTACAAGATG+GGG + chr4_4:60351195-60351214 None:intergenic 40.0%
CAGTAGTCAATGCTACAAGA+TGG + chr4_4:60351197-60351216 None:intergenic 40.0%
!! GAGTGAATCCAGTCATTTTG+GGG + chr4_4:60351236-60351255 None:intergenic 40.0%
!! GGAGTGAATCCAGTCATTTT+GGG + chr4_4:60351237-60351256 None:intergenic 40.0%
! TGGAGTGAATCCAGTCATTT+TGG + chr4_4:60351238-60351257 None:intergenic 40.0%
TCCCCCTATGATATGATTTC+TGG + chr4_4:60351258-60351277 None:intergenic 40.0%
TTTGTGTCCATATGTAGCTC+TGG - chr4_4:60351416-60351435 Msa0692040:intron 40.0%
TATTGAACTAGGCTCCATCT+TGG - chr4_4:60351471-60351490 Msa0692040:intron 40.0%
AAGTTGAAAGATGCCAACTC+GGG - chr4_4:60351580-60351599 Msa0692040:intron 40.0%
!! AGCAAGAAGGTATTGGTGAT+AGG + chr4_4:60352121-60352140 None:intergenic 40.0%
AAATACAAACGGAAGCCACT+GGG + chr4_4:60352168-60352187 None:intergenic 40.0%
AGGCAAACGATAATCTAGTG+AGG - chr4_4:60352261-60352280 Msa0692040:five_prime_UTR 40.0%
!!! TGTTTTTGGCTTGCAAAACG+GGG - chr4_4:60352302-60352321 Msa0692040:five_prime_UTR 40.0%
TACTTCAACACCACACATCT+CGG + chr4_4:60352440-60352459 None:intergenic 40.0%
! GTGTGGTGTTGAAGTACATA+TGG - chr4_4:60352444-60352463 Msa0692040:five_prime_UTR 40.0%
!! AAAGGCACTATAAAGTTGGG+GGG - chr4_4:60348538-60348557 Msa0692040:three_prime_UTR 40.0%
AGGGTAAGTAAGTCCAAACA+AGG - chr4_4:60348577-60348596 Msa0692040:three_prime_UTR 40.0%
ACGAAGAAGGTGAAAAAGAG+GGG + chr4_4:60348837-60348856 None:intergenic 40.0%
GAACGAAGAAGGTGAAAAAG+AGG + chr4_4:60348839-60348858 None:intergenic 40.0%
TGAGAAGAAAGGAACGAAGA+AGG + chr4_4:60348850-60348869 None:intergenic 40.0%
! AATCCAATTCGTGTTTTCCC+GGG + chr4_4:60348981-60349000 None:intergenic 40.0%
ACATTGGAAGCAAGGTTGAA+GGG + chr4_4:60349091-60349110 None:intergenic 40.0%
AATGAGTACAGACCTGACAT+TGG + chr4_4:60349107-60349126 None:intergenic 40.0%
AACCCTAATTATGAAACGGG+GGG + chr4_4:60349138-60349157 None:intergenic 40.0%
! ATAGTCCTCGATTTGTCTCA+TGG - chr4_4:60349475-60349494 Msa0692040:intron 40.0%
GCGAACAAGAAAGAATGTTG+AGG - chr4_4:60349615-60349634 Msa0692040:CDS 40.0%
AGAAAGAATGTTGAGGTGGA+TGG - chr4_4:60349622-60349641 Msa0692040:CDS 40.0%
GAAAGAATGTTGAGGTGGAT+GGG - chr4_4:60349623-60349642 Msa0692040:CDS 40.0%
TTGAATTCAGGGTAGAGGAA+AGG - chr4_4:60349803-60349822 Msa0692040:CDS 40.0%
! CCTAGCAGAAACCAAGTTTT+AGG + chr4_4:60349866-60349885 None:intergenic 40.0%
CCTAAAACTTGGTTTCTGCT+AGG - chr4_4:60349863-60349882 Msa0692040:intron 40.0%
TGTTGACATGTGAATGGGAA+AGG - chr4_4:60349994-60350013 Msa0692040:intron 40.0%
CCGCCTAAAAAACATTGTCA+AGG + chr4_4:60350060-60350079 None:intergenic 40.0%
GTTGAGTATGGGAAACTTAG+TGG - chr4_4:60350082-60350101 Msa0692040:intron 40.0%
TAGTGTAGTGGTTTGAATGG+AGG - chr4_4:60350268-60350287 Msa0692040:intron 40.0%
TTCCCCAATTCCTCATAACA+TGG - chr4_4:60350375-60350394 Msa0692040:intron 40.0%
TCCCCAATTCCTCATAACAT+GGG - chr4_4:60350376-60350395 Msa0692040:intron 40.0%
ACCCATGTTATGAGGAATTG+GGG + chr4_4:60350380-60350399 None:intergenic 40.0%
GTACCCATGTTATGAGGAAT+TGG + chr4_4:60350382-60350401 None:intergenic 40.0%
AACATGGGTACATTTGTGGT+TGG - chr4_4:60350391-60350410 Msa0692040:intron 40.0%
! CTGAAATTGATGGCTCGTTA+GGG - chr4_4:60350579-60350598 Msa0692040:intron 40.0%
! TGAAATTGATGGCTCGTTAG+GGG - chr4_4:60350580-60350599 Msa0692040:intron 40.0%
! AAGAGTCTGGTTCAAAGAAG+AGG - chr4_4:60350618-60350637 Msa0692040:intron 40.0%
TAGTTCAATGAAAGGGAAGG+AGG + chr4_4:60350660-60350679 None:intergenic 40.0%
!!! CACACGCTGATTCCTTTTTT+AGG + chr4_4:60350727-60350746 None:intergenic 40.0%
GATTTAAACAGGGAGTAGCT+AGG + chr4_4:60350852-60350871 None:intergenic 40.0%
CTGAGATTAAAAGGCAGTGT+TGG - chr4_4:60350934-60350953 Msa0692040:intron 40.0%
GATAACATATGCAACGCCTT+AGG + chr4_4:60351107-60351126 None:intergenic 40.0%
GAAAGATAATGCCGGAAAGT+TGG + chr4_4:60351173-60351192 None:intergenic 40.0%
AAGATGGGGAAAGATAATGC+CGG + chr4_4:60351181-60351200 None:intergenic 40.0%
GTAGTCAATGCTACAAGATG+GGG + chr4_4:60351195-60351214 None:intergenic 40.0%
CAGTAGTCAATGCTACAAGA+TGG + chr4_4:60351197-60351216 None:intergenic 40.0%
!! GAGTGAATCCAGTCATTTTG+GGG + chr4_4:60351236-60351255 None:intergenic 40.0%
!! GGAGTGAATCCAGTCATTTT+GGG + chr4_4:60351237-60351256 None:intergenic 40.0%
! TGGAGTGAATCCAGTCATTT+TGG + chr4_4:60351238-60351257 None:intergenic 40.0%
TCCCCCTATGATATGATTTC+TGG + chr4_4:60351258-60351277 None:intergenic 40.0%
TTTGTGTCCATATGTAGCTC+TGG - chr4_4:60351416-60351435 Msa0692040:intron 40.0%
TATTGAACTAGGCTCCATCT+TGG - chr4_4:60351471-60351490 Msa0692040:intron 40.0%
AAGTTGAAAGATGCCAACTC+GGG - chr4_4:60351580-60351599 Msa0692040:intron 40.0%
!! AGCAAGAAGGTATTGGTGAT+AGG + chr4_4:60352121-60352140 None:intergenic 40.0%
AAATACAAACGGAAGCCACT+GGG + chr4_4:60352168-60352187 None:intergenic 40.0%
AGGCAAACGATAATCTAGTG+AGG - chr4_4:60352261-60352280 Msa0692040:five_prime_UTR 40.0%
!!! TGTTTTTGGCTTGCAAAACG+GGG - chr4_4:60352302-60352321 Msa0692040:five_prime_UTR 40.0%
TACTTCAACACCACACATCT+CGG + chr4_4:60352440-60352459 None:intergenic 40.0%
! GTGTGGTGTTGAAGTACATA+TGG - chr4_4:60352444-60352463 Msa0692040:five_prime_UTR 40.0%
CCACAAATCAACTGTTTCGG+TGG + chr4_4:60348603-60348622 None:intergenic 45.0%
!! CCACCGAAACAGTTGATTTG+TGG - chr4_4:60348600-60348619 Msa0692040:three_prime_UTR 45.0%
CGGTTGCACGAATGAGAATT+GGG + chr4_4:60348876-60348895 None:intergenic 45.0%
TCGGTTGCACGAATGAGAAT+TGG + chr4_4:60348877-60348896 None:intergenic 45.0%
TTTCCCGGGAAAACACGAAT+TGG - chr4_4:60348975-60348994 Msa0692040:three_prime_UTR 45.0%
AGGAAGAGCGAAGGTTGAAT+CGG + chr4_4:60349038-60349057 None:intergenic 45.0%
ATTGGAAGCAAGGTTGAAGG+GGG + chr4_4:60349089-60349108 None:intergenic 45.0%
CATTGGAAGCAAGGTTGAAG+GGG + chr4_4:60349090-60349109 None:intergenic 45.0%
GACATTGGAAGCAAGGTTGA+AGG + chr4_4:60349092-60349111 None:intergenic 45.0%
TCAACCTTGCTTCCAATGTC+AGG - chr4_4:60349092-60349111 Msa0692040:CDS 45.0%
ACCCTAATTATGAAACGGGG+GGG + chr4_4:60349137-60349156 None:intergenic 45.0%
CTCGTGCTAGATGGATGAAA+TGG - chr4_4:60349499-60349518 Msa0692040:intron 45.0%
! TTCAATGGAAGTTGGTCTGC+AGG - chr4_4:60349677-60349696 Msa0692040:intron 45.0%
CGGAAAAGCGGATCAAATAG+AGG - chr4_4:60349776-60349795 Msa0692040:CDS 45.0%
! TGCAATTTTCCATGGAGGCA+TGG - chr4_4:60349963-60349982 Msa0692040:intron 45.0%
!! GCAATTTTCCATGGAGGCAT+GGG - chr4_4:60349964-60349983 Msa0692040:intron 45.0%
TGCTGCTGTTGACATGTGAA+TGG - chr4_4:60349988-60350007 Msa0692040:intron 45.0%
GCTGCTGTTGACATGTGAAT+GGG - chr4_4:60349989-60350008 Msa0692040:intron 45.0%
! TTTTAGGCGGGAGTTGAGTA+TGG - chr4_4:60350070-60350089 Msa0692040:intron 45.0%
TTTAGGCGGGAGTTGAGTAT+GGG - chr4_4:60350071-60350090 Msa0692040:intron 45.0%
ATTGGGGAAAATGCTACAGC+TGG + chr4_4:60350364-60350383 None:intergenic 45.0%
! GCTGCTAGTGCTGAAATTGA+TGG - chr4_4:60350569-60350588 Msa0692040:intron 45.0%
! GCTGAAATTGATGGCTCGTT+AGG - chr4_4:60350578-60350597 Msa0692040:intron 45.0%
TCTGACAGTCTCAAAGAGTC+TGG - chr4_4:60350605-60350624 Msa0692040:intron 45.0%
TCCTATTTGTATCGCTGGCA+AGG + chr4_4:60350981-60351000 None:intergenic 45.0%
AGTGCTCCTATTTGTATCGC+TGG + chr4_4:60350986-60351005 None:intergenic 45.0%
CTACTAGCTCCAAAGCATGT+CGG - chr4_4:60351337-60351356 Msa0692040:intron 45.0%
TACTAGCTCCAAAGCATGTC+GGG - chr4_4:60351338-60351357 Msa0692040:intron 45.0%
GTACACACCAGAGCTACATA+TGG + chr4_4:60351426-60351445 None:intergenic 45.0%
TCCGAATGGTGACACAGTTA+AGG - chr4_4:60351545-60351564 Msa0692040:intron 45.0%
CCCTTAACTGTGTCACCATT+CGG + chr4_4:60351549-60351568 None:intergenic 45.0%
CCGAATGGTGACACAGTTAA+GGG - chr4_4:60351546-60351565 Msa0692040:intron 45.0%
CGAATGGTGACACAGTTAAG+GGG - chr4_4:60351547-60351566 Msa0692040:intron 45.0%
! CTTTTCTTGAAGACCCGAGT+TGG + chr4_4:60351596-60351615 None:intergenic 45.0%
AACTTCGTGACGAGAAACAG+AGG - chr4_4:60351815-60351834 Msa0692040:intron 45.0%
CAAGGCAGAGAAAGAGAAGT+TGG - chr4_4:60351840-60351859 Msa0692040:intron 45.0%
!! GGGTACCAATTTGTTGCCAT+GGG + chr4_4:60351953-60351972 None:intergenic 45.0%
!! AGGGTACCAATTTGTTGCCA+TGG + chr4_4:60351954-60351973 None:intergenic 45.0%
GTTATCCAGGAGTTGCAATG+TGG - chr4_4:60351980-60351999 Msa0692040:intron 45.0%
AATTGCCACATTGCAACTCC+TGG + chr4_4:60351988-60352007 None:intergenic 45.0%
ACGAAGTACATGATCCTGTG+AGG + chr4_4:60352034-60352053 None:intergenic 45.0%
!! CTGGCTCTGTGCAATTGTTT+GGG - chr4_4:60352070-60352089 Msa0692040:CDS 45.0%
TGTATTCTAACTGGACCCAG+TGG - chr4_4:60352150-60352169 Msa0692040:exon 45.0%
CAAATACAAACGGAAGCCAC+TGG + chr4_4:60352169-60352188 None:intergenic 45.0%
CAGTGGCTTCCGTTTGTATT+TGG - chr4_4:60352167-60352186 Msa0692040:exon 45.0%
! TTCGGTTCGTGTGAGTACAA+GGG + chr4_4:60352405-60352424 None:intergenic 45.0%
! ATTCGGTTCGTGTGAGTACA+AGG + chr4_4:60352406-60352425 None:intergenic 45.0%
CAGATATGTACCGAGATGTG+TGG - chr4_4:60352427-60352446 Msa0692040:five_prime_UTR 45.0%
GATATTAAACCTCCACGCTC+TGG - chr4_4:60352493-60352512 Msa0692040:five_prime_UTR 45.0%
CCACAAATCAACTGTTTCGG+TGG + chr4_4:60348603-60348622 None:intergenic 45.0%
!! CCACCGAAACAGTTGATTTG+TGG - chr4_4:60348600-60348619 Msa0692040:three_prime_UTR 45.0%
CGGTTGCACGAATGAGAATT+GGG + chr4_4:60348876-60348895 None:intergenic 45.0%
TCGGTTGCACGAATGAGAAT+TGG + chr4_4:60348877-60348896 None:intergenic 45.0%
TTTCCCGGGAAAACACGAAT+TGG - chr4_4:60348975-60348994 Msa0692040:three_prime_UTR 45.0%
AGGAAGAGCGAAGGTTGAAT+CGG + chr4_4:60349038-60349057 None:intergenic 45.0%
ATTGGAAGCAAGGTTGAAGG+GGG + chr4_4:60349089-60349108 None:intergenic 45.0%
CATTGGAAGCAAGGTTGAAG+GGG + chr4_4:60349090-60349109 None:intergenic 45.0%
GACATTGGAAGCAAGGTTGA+AGG + chr4_4:60349092-60349111 None:intergenic 45.0%
TCAACCTTGCTTCCAATGTC+AGG - chr4_4:60349092-60349111 Msa0692040:CDS 45.0%
ACCCTAATTATGAAACGGGG+GGG + chr4_4:60349137-60349156 None:intergenic 45.0%
CTCGTGCTAGATGGATGAAA+TGG - chr4_4:60349499-60349518 Msa0692040:intron 45.0%
! TTCAATGGAAGTTGGTCTGC+AGG - chr4_4:60349677-60349696 Msa0692040:intron 45.0%
CGGAAAAGCGGATCAAATAG+AGG - chr4_4:60349776-60349795 Msa0692040:CDS 45.0%
! TGCAATTTTCCATGGAGGCA+TGG - chr4_4:60349963-60349982 Msa0692040:intron 45.0%
!! GCAATTTTCCATGGAGGCAT+GGG - chr4_4:60349964-60349983 Msa0692040:intron 45.0%
TGCTGCTGTTGACATGTGAA+TGG - chr4_4:60349988-60350007 Msa0692040:intron 45.0%
GCTGCTGTTGACATGTGAAT+GGG - chr4_4:60349989-60350008 Msa0692040:intron 45.0%
! TTTTAGGCGGGAGTTGAGTA+TGG - chr4_4:60350070-60350089 Msa0692040:intron 45.0%
TTTAGGCGGGAGTTGAGTAT+GGG - chr4_4:60350071-60350090 Msa0692040:intron 45.0%
ATTGGGGAAAATGCTACAGC+TGG + chr4_4:60350364-60350383 None:intergenic 45.0%
! GCTGCTAGTGCTGAAATTGA+TGG - chr4_4:60350569-60350588 Msa0692040:intron 45.0%
! GCTGAAATTGATGGCTCGTT+AGG - chr4_4:60350578-60350597 Msa0692040:intron 45.0%
TCTGACAGTCTCAAAGAGTC+TGG - chr4_4:60350605-60350624 Msa0692040:intron 45.0%
TCCTATTTGTATCGCTGGCA+AGG + chr4_4:60350981-60351000 None:intergenic 45.0%
AGTGCTCCTATTTGTATCGC+TGG + chr4_4:60350986-60351005 None:intergenic 45.0%
CTACTAGCTCCAAAGCATGT+CGG - chr4_4:60351337-60351356 Msa0692040:intron 45.0%
TACTAGCTCCAAAGCATGTC+GGG - chr4_4:60351338-60351357 Msa0692040:intron 45.0%
GTACACACCAGAGCTACATA+TGG + chr4_4:60351426-60351445 None:intergenic 45.0%
TCCGAATGGTGACACAGTTA+AGG - chr4_4:60351545-60351564 Msa0692040:intron 45.0%
CCCTTAACTGTGTCACCATT+CGG + chr4_4:60351549-60351568 None:intergenic 45.0%
CCGAATGGTGACACAGTTAA+GGG - chr4_4:60351546-60351565 Msa0692040:intron 45.0%
CGAATGGTGACACAGTTAAG+GGG - chr4_4:60351547-60351566 Msa0692040:intron 45.0%
! CTTTTCTTGAAGACCCGAGT+TGG + chr4_4:60351596-60351615 None:intergenic 45.0%
AACTTCGTGACGAGAAACAG+AGG - chr4_4:60351815-60351834 Msa0692040:intron 45.0%
CAAGGCAGAGAAAGAGAAGT+TGG - chr4_4:60351840-60351859 Msa0692040:intron 45.0%
!! GGGTACCAATTTGTTGCCAT+GGG + chr4_4:60351953-60351972 None:intergenic 45.0%
!! AGGGTACCAATTTGTTGCCA+TGG + chr4_4:60351954-60351973 None:intergenic 45.0%
GTTATCCAGGAGTTGCAATG+TGG - chr4_4:60351980-60351999 Msa0692040:intron 45.0%
AATTGCCACATTGCAACTCC+TGG + chr4_4:60351988-60352007 None:intergenic 45.0%
ACGAAGTACATGATCCTGTG+AGG + chr4_4:60352034-60352053 None:intergenic 45.0%
!! CTGGCTCTGTGCAATTGTTT+GGG - chr4_4:60352070-60352089 Msa0692040:CDS 45.0%
TGTATTCTAACTGGACCCAG+TGG - chr4_4:60352150-60352169 Msa0692040:exon 45.0%
CAAATACAAACGGAAGCCAC+TGG + chr4_4:60352169-60352188 None:intergenic 45.0%
CAGTGGCTTCCGTTTGTATT+TGG - chr4_4:60352167-60352186 Msa0692040:exon 45.0%
! TTCGGTTCGTGTGAGTACAA+GGG + chr4_4:60352405-60352424 None:intergenic 45.0%
! ATTCGGTTCGTGTGAGTACA+AGG + chr4_4:60352406-60352425 None:intergenic 45.0%
CAGATATGTACCGAGATGTG+TGG - chr4_4:60352427-60352446 Msa0692040:five_prime_UTR 45.0%
GATATTAAACCTCCACGCTC+TGG - chr4_4:60352493-60352512 Msa0692040:five_prime_UTR 45.0%
!! TGTAATTAAATTAATAATAA+TGG + chr4_4:60348784-60348803 None:intergenic 5.0%
!! TGTAATTAAATTAATAATAA+TGG + chr4_4:60348784-60348803 None:intergenic 5.0%
GCACTATAAAGTTGGGGGGT+TGG - chr4_4:60348542-60348561 Msa0692040:three_prime_UTR 50.0%
!! ACTGTTTCGGTGGCCTTGTT+TGG + chr4_4:60348593-60348612 None:intergenic 50.0%
GGGGGAATCTGTGTTTGTGT+GGG + chr4_4:60348693-60348712 None:intergenic 50.0%
TGGGGGAATCTGTGTTTGTG+TGG + chr4_4:60348694-60348713 None:intergenic 50.0%
AAGGTAGCTAGGGTACGGAA+TGG - chr4_4:60348952-60348971 Msa0692040:three_prime_UTR 50.0%
TAGGGTACGGAATGGTTTCC+CGG - chr4_4:60348960-60348979 Msa0692040:three_prime_UTR 50.0%
AGCGAAGGTTGAATCGGGAA+CGG + chr4_4:60349032-60349051 None:intergenic 50.0%
GGAAGAGCGAAGGTTGAATC+GGG + chr4_4:60349037-60349056 None:intergenic 50.0%
TTGGAAGCAAGGTTGAAGGG+GGG + chr4_4:60349088-60349107 None:intergenic 50.0%
CAGACCTGACATTGGAAGCA+AGG + chr4_4:60349099-60349118 None:intergenic 50.0%
TAATTATGAAACGGGGGGGG+GGG + chr4_4:60349133-60349152 None:intergenic 50.0%
CTAATTATGAAACGGGGGGG+GGG + chr4_4:60349134-60349153 None:intergenic 50.0%
CCTAATTATGAAACGGGGGG+GGG + chr4_4:60349135-60349154 None:intergenic 50.0%
CCCTAATTATGAAACGGGGG+GGG + chr4_4:60349136-60349155 None:intergenic 50.0%
CCCCCCCCGTTTCATAATTA+GGG - chr4_4:60349133-60349152 Msa0692040:CDS 50.0%
CGAGTCCATGAGACAAATCG+AGG + chr4_4:60349483-60349502 None:intergenic 50.0%
TCTCATGGACTCGTGCTAGA+TGG - chr4_4:60349490-60349509 Msa0692040:intron 50.0%
AGAATGTTGAGGTGGATGGG+TGG - chr4_4:60349626-60349645 Msa0692040:CDS 50.0%
GCCTTGCCAGCGATACAAAT+AGG - chr4_4:60350977-60350996 Msa0692040:intron 50.0%
CAACTTCTCCCGACATGCTT+TGG + chr4_4:60351349-60351368 None:intergenic 50.0%
! AATCAGGATGGCAGCCTTGT+CGG + chr4_4:60351518-60351537 None:intergenic 50.0%
TCGGACAGCATCAATCAGGA+TGG + chr4_4:60351530-60351549 None:intergenic 50.0%
CCATTCGGACAGCATCAATC+AGG + chr4_4:60351534-60351553 None:intergenic 50.0%
CCTGATTGATGCTGTCCGAA+TGG - chr4_4:60351531-60351550 Msa0692040:intron 50.0%
TGACGAGAAACAGAGGCTCA+AGG - chr4_4:60351822-60351841 Msa0692040:intron 50.0%
!! CCAATTTGTTGCCATGGGCT+TGG + chr4_4:60351948-60351967 None:intergenic 50.0%
CCAAGCCCATGGCAACAAAT+TGG - chr4_4:60351945-60351964 Msa0692040:intron 50.0%
ATTTATGCCACCTGCTGCAG+TGG - chr4_4:60352005-60352024 Msa0692040:intron 50.0%
CAATTGCACAGAGCCAGCTT+AGG + chr4_4:60352067-60352086 None:intergenic 50.0%
!! GCTGGCTCTGTGCAATTGTT+TGG - chr4_4:60352069-60352088 Msa0692040:CDS 50.0%
GTGCTTGGGTCACTATTGTG+AGG - chr4_4:60352531-60352550 Msa0692040:five_prime_UTR 50.0%
TTGGATCGGATGTTGCACCA+AGG - chr4_4:60352591-60352610 Msa0692040:five_prime_UTR 50.0%
TGGATCGGATGTTGCACCAA+GGG - chr4_4:60352592-60352611 Msa0692040:five_prime_UTR 50.0%
GCACTATAAAGTTGGGGGGT+TGG - chr4_4:60348542-60348561 Msa0692040:three_prime_UTR 50.0%
!! ACTGTTTCGGTGGCCTTGTT+TGG + chr4_4:60348593-60348612 None:intergenic 50.0%
GGGGGAATCTGTGTTTGTGT+GGG + chr4_4:60348693-60348712 None:intergenic 50.0%
TGGGGGAATCTGTGTTTGTG+TGG + chr4_4:60348694-60348713 None:intergenic 50.0%
AAGGTAGCTAGGGTACGGAA+TGG - chr4_4:60348952-60348971 Msa0692040:three_prime_UTR 50.0%
TAGGGTACGGAATGGTTTCC+CGG - chr4_4:60348960-60348979 Msa0692040:three_prime_UTR 50.0%
AGCGAAGGTTGAATCGGGAA+CGG + chr4_4:60349032-60349051 None:intergenic 50.0%
GGAAGAGCGAAGGTTGAATC+GGG + chr4_4:60349037-60349056 None:intergenic 50.0%
TTGGAAGCAAGGTTGAAGGG+GGG + chr4_4:60349088-60349107 None:intergenic 50.0%
CAGACCTGACATTGGAAGCA+AGG + chr4_4:60349099-60349118 None:intergenic 50.0%
TAATTATGAAACGGGGGGGG+GGG + chr4_4:60349133-60349152 None:intergenic 50.0%
CTAATTATGAAACGGGGGGG+GGG + chr4_4:60349134-60349153 None:intergenic 50.0%
CCTAATTATGAAACGGGGGG+GGG + chr4_4:60349135-60349154 None:intergenic 50.0%
CCCTAATTATGAAACGGGGG+GGG + chr4_4:60349136-60349155 None:intergenic 50.0%
CCCCCCCCGTTTCATAATTA+GGG - chr4_4:60349133-60349152 Msa0692040:CDS 50.0%
CGAGTCCATGAGACAAATCG+AGG + chr4_4:60349483-60349502 None:intergenic 50.0%
TCTCATGGACTCGTGCTAGA+TGG - chr4_4:60349490-60349509 Msa0692040:intron 50.0%
AGAATGTTGAGGTGGATGGG+TGG - chr4_4:60349626-60349645 Msa0692040:CDS 50.0%
GCCTTGCCAGCGATACAAAT+AGG - chr4_4:60350977-60350996 Msa0692040:intron 50.0%
CAACTTCTCCCGACATGCTT+TGG + chr4_4:60351349-60351368 None:intergenic 50.0%
! AATCAGGATGGCAGCCTTGT+CGG + chr4_4:60351518-60351537 None:intergenic 50.0%
TCGGACAGCATCAATCAGGA+TGG + chr4_4:60351530-60351549 None:intergenic 50.0%
CCATTCGGACAGCATCAATC+AGG + chr4_4:60351534-60351553 None:intergenic 50.0%
CCTGATTGATGCTGTCCGAA+TGG - chr4_4:60351531-60351550 Msa0692040:intron 50.0%
TGACGAGAAACAGAGGCTCA+AGG - chr4_4:60351822-60351841 Msa0692040:intron 50.0%
!! CCAATTTGTTGCCATGGGCT+TGG + chr4_4:60351948-60351967 None:intergenic 50.0%
CCAAGCCCATGGCAACAAAT+TGG - chr4_4:60351945-60351964 Msa0692040:intron 50.0%
ATTTATGCCACCTGCTGCAG+TGG - chr4_4:60352005-60352024 Msa0692040:intron 50.0%
CAATTGCACAGAGCCAGCTT+AGG + chr4_4:60352067-60352086 None:intergenic 50.0%
!! GCTGGCTCTGTGCAATTGTT+TGG - chr4_4:60352069-60352088 Msa0692040:CDS 50.0%
GTGCTTGGGTCACTATTGTG+AGG - chr4_4:60352531-60352550 Msa0692040:five_prime_UTR 50.0%
TTGGATCGGATGTTGCACCA+AGG - chr4_4:60352591-60352610 Msa0692040:five_prime_UTR 50.0%
TGGATCGGATGTTGCACCAA+GGG - chr4_4:60352592-60352611 Msa0692040:five_prime_UTR 50.0%
AGGGTACGGAATGGTTTCCC+GGG - chr4_4:60348961-60348980 Msa0692040:three_prime_UTR 55.0%
GCGAAGGTTGAATCGGGAAC+GGG + chr4_4:60349031-60349050 None:intergenic 55.0%
TTCCTTCCTCTGCCTTCACC+TGG - chr4_4:60349053-60349072 Msa0692040:exon 55.0%
AATTATGAAACGGGGGGGGG+GGG + chr4_4:60349132-60349151 None:intergenic 55.0%
CCCCCCCCCGTTTCATAATT+AGG - chr4_4:60349132-60349151 Msa0692040:CDS 55.0%
TGGTTTCTGCTAGGGCCCAA+TGG - chr4_4:60349872-60349891 Msa0692040:intron 55.0%
AAGGCCTGCCAAAACCGACA+AGG - chr4_4:60351501-60351520 Msa0692040:intron 55.0%
!!! GATGGCAGCCTTGTCGGTTT+TGG + chr4_4:60351512-60351531 None:intergenic 55.0%
GGGGTAGGCAAGAAACTAGG+TGG + chr4_4:60351892-60351911 None:intergenic 55.0%
GTGGGGGTAGGCAAGAAACT+AGG + chr4_4:60351895-60351914 None:intergenic 55.0%
CTTGTGCAGCAAATGCCGCA+GGG + chr4_4:60351924-60351943 None:intergenic 55.0%
! TGTGAGGTATCCACTGCAGC+AGG + chr4_4:60352018-60352037 None:intergenic 55.0%
TGCTGCAGTGGATACCTCAC+AGG - chr4_4:60352017-60352036 Msa0692040:intron 55.0%
ACAGAGCCAGCTTAGGCAAC+TGG + chr4_4:60352060-60352079 None:intergenic 55.0%
ACCACAGTGCTCATGGTGCT+TGG - chr4_4:60352516-60352535 Msa0692040:five_prime_UTR 55.0%
CCACAGTGCTCATGGTGCTT+GGG - chr4_4:60352517-60352536 Msa0692040:five_prime_UTR 55.0%
AGGGTACGGAATGGTTTCCC+GGG - chr4_4:60348961-60348980 Msa0692040:three_prime_UTR 55.0%
GCGAAGGTTGAATCGGGAAC+GGG + chr4_4:60349031-60349050 None:intergenic 55.0%
TTCCTTCCTCTGCCTTCACC+TGG - chr4_4:60349053-60349072 Msa0692040:exon 55.0%
AATTATGAAACGGGGGGGGG+GGG + chr4_4:60349132-60349151 None:intergenic 55.0%
CCCCCCCCCGTTTCATAATT+AGG - chr4_4:60349132-60349151 Msa0692040:CDS 55.0%
TGGTTTCTGCTAGGGCCCAA+TGG - chr4_4:60349872-60349891 Msa0692040:intron 55.0%
AAGGCCTGCCAAAACCGACA+AGG - chr4_4:60351501-60351520 Msa0692040:intron 55.0%
!!! GATGGCAGCCTTGTCGGTTT+TGG + chr4_4:60351512-60351531 None:intergenic 55.0%
GGGGTAGGCAAGAAACTAGG+TGG + chr4_4:60351892-60351911 None:intergenic 55.0%
GTGGGGGTAGGCAAGAAACT+AGG + chr4_4:60351895-60351914 None:intergenic 55.0%
CTTGTGCAGCAAATGCCGCA+GGG + chr4_4:60351924-60351943 None:intergenic 55.0%
! TGTGAGGTATCCACTGCAGC+AGG + chr4_4:60352018-60352037 None:intergenic 55.0%
TGCTGCAGTGGATACCTCAC+AGG - chr4_4:60352017-60352036 Msa0692040:intron 55.0%
ACAGAGCCAGCTTAGGCAAC+TGG + chr4_4:60352060-60352079 None:intergenic 55.0%
ACCACAGTGCTCATGGTGCT+TGG - chr4_4:60352516-60352535 Msa0692040:five_prime_UTR 55.0%
CCACAGTGCTCATGGTGCTT+GGG - chr4_4:60352517-60352536 Msa0692040:five_prime_UTR 55.0%
CCGTACCCTAGCTACCTTCC+CGG + chr4_4:60348950-60348969 None:intergenic 60.0%
CCGGGAAGGTAGCTAGGGTA+CGG - chr4_4:60348947-60348966 Msa0692040:three_prime_UTR 60.0%
GGCAGAGGAAGGAAGAGCGA+AGG + chr4_4:60349047-60349066 None:intergenic 60.0%
AGGTTGAAGGGGGGCTGAGT+GGG + chr4_4:60349079-60349098 None:intergenic 60.0%
AAGGTTGAAGGGGGGCTGAG+TGG + chr4_4:60349080-60349099 None:intergenic 60.0%
ATTATGAAACGGGGGGGGGG+GGG + chr4_4:60349131-60349150 None:intergenic 60.0%
CTAGGCTCCATCTTGGAGCC+TGG - chr4_4:60351478-60351497 Msa0692040:intron 60.0%
GCTCCATCTTGGAGCCTGGA+AGG - chr4_4:60351482-60351501 Msa0692040:intron 60.0%
AGGCCTTCCAGGCTCCAAGA+TGG + chr4_4:60351488-60351507 None:intergenic 60.0%
!! TCGGTTTTGGCAGGCCTTCC+AGG + chr4_4:60351499-60351518 None:intergenic 60.0%
!!! GCAGCCTTGTCGGTTTTGGC+AGG + chr4_4:60351508-60351527 None:intergenic 60.0%
AGCAAATGCCGCAGGGAGTG+CGG + chr4_4:60351917-60351936 None:intergenic 60.0%
CCTTGTGCAGCAAATGCCGC+AGG + chr4_4:60351925-60351944 None:intergenic 60.0%
! CCTGCGGCATTTGCTGCACA+AGG - chr4_4:60351922-60351941 Msa0692040:intron 60.0%
! GAGGTATCCACTGCAGCAGG+TGG + chr4_4:60352015-60352034 None:intergenic 60.0%
CGTCCTCCAGTTGCCTAAGC+TGG - chr4_4:60352051-60352070 Msa0692040:CDS 60.0%
GAGCCAGCTTAGGCAACTGG+AGG + chr4_4:60352057-60352076 None:intergenic 60.0%
! GCTCTGGACCACAGTGCTCA+TGG - chr4_4:60352509-60352528 Msa0692040:five_prime_UTR 60.0%
! CCCAAGCACCATGAGCACTG+TGG + chr4_4:60352520-60352539 None:intergenic 60.0%
CCGTACCCTAGCTACCTTCC+CGG + chr4_4:60348950-60348969 None:intergenic 60.0%
CCGGGAAGGTAGCTAGGGTA+CGG - chr4_4:60348947-60348966 Msa0692040:three_prime_UTR 60.0%
GGCAGAGGAAGGAAGAGCGA+AGG + chr4_4:60349047-60349066 None:intergenic 60.0%
AGGTTGAAGGGGGGCTGAGT+GGG + chr4_4:60349079-60349098 None:intergenic 60.0%
AAGGTTGAAGGGGGGCTGAG+TGG + chr4_4:60349080-60349099 None:intergenic 60.0%
ATTATGAAACGGGGGGGGGG+GGG + chr4_4:60349131-60349150 None:intergenic 60.0%
CTAGGCTCCATCTTGGAGCC+TGG - chr4_4:60351478-60351497 Msa0692040:intron 60.0%
GCTCCATCTTGGAGCCTGGA+AGG - chr4_4:60351482-60351501 Msa0692040:intron 60.0%
AGGCCTTCCAGGCTCCAAGA+TGG + chr4_4:60351488-60351507 None:intergenic 60.0%
!! TCGGTTTTGGCAGGCCTTCC+AGG + chr4_4:60351499-60351518 None:intergenic 60.0%
!!! GCAGCCTTGTCGGTTTTGGC+AGG + chr4_4:60351508-60351527 None:intergenic 60.0%
AGCAAATGCCGCAGGGAGTG+CGG + chr4_4:60351917-60351936 None:intergenic 60.0%
CCTTGTGCAGCAAATGCCGC+AGG + chr4_4:60351925-60351944 None:intergenic 60.0%
! CCTGCGGCATTTGCTGCACA+AGG - chr4_4:60351922-60351941 Msa0692040:intron 60.0%
! GAGGTATCCACTGCAGCAGG+TGG + chr4_4:60352015-60352034 None:intergenic 60.0%
CGTCCTCCAGTTGCCTAAGC+TGG - chr4_4:60352051-60352070 Msa0692040:CDS 60.0%
GAGCCAGCTTAGGCAACTGG+AGG + chr4_4:60352057-60352076 None:intergenic 60.0%
! GCTCTGGACCACAGTGCTCA+TGG - chr4_4:60352509-60352528 Msa0692040:five_prime_UTR 60.0%
! CCCAAGCACCATGAGCACTG+TGG + chr4_4:60352520-60352539 None:intergenic 60.0%
ACGCGCCGGGAAGGTAGCTA+GGG - chr4_4:60348942-60348961 Msa0692040:three_prime_UTR 65.0%
GGCCAGGTGAAGGCAGAGGA+AGG + chr4_4:60349058-60349077 None:intergenic 65.0%
AGTGGGCCAGGTGAAGGCAG+AGG + chr4_4:60349062-60349081 None:intergenic 65.0%
TTATGAAACGGGGGGGGGGG+GGG + chr4_4:60349130-60349149 None:intergenic 65.0%
AGCAGCAGCCCATGCCTCCA+TGG + chr4_4:60349975-60349994 None:intergenic 65.0%
! AATGCCGCAGGGAGTGCGGT+GGG + chr4_4:60351913-60351932 None:intergenic 65.0%
! AAATGCCGCAGGGAGTGCGG+TGG + chr4_4:60351914-60351933 None:intergenic 65.0%
GCTGCACAAGGCCAAGCCCA+TGG - chr4_4:60351934-60351953 Msa0692040:intron 65.0%
CACTGTGGTCCAGAGCGTGG+AGG + chr4_4:60352505-60352524 None:intergenic 65.0%
! GAGCACTGTGGTCCAGAGCG+TGG + chr4_4:60352508-60352527 None:intergenic 65.0%
ACGCGCCGGGAAGGTAGCTA+GGG - chr4_4:60348942-60348961 Msa0692040:three_prime_UTR 65.0%
GGCCAGGTGAAGGCAGAGGA+AGG + chr4_4:60349058-60349077 None:intergenic 65.0%
AGTGGGCCAGGTGAAGGCAG+AGG + chr4_4:60349062-60349081 None:intergenic 65.0%
TTATGAAACGGGGGGGGGGG+GGG + chr4_4:60349130-60349149 None:intergenic 65.0%
AGCAGCAGCCCATGCCTCCA+TGG + chr4_4:60349975-60349994 None:intergenic 65.0%
! AATGCCGCAGGGAGTGCGGT+GGG + chr4_4:60351913-60351932 None:intergenic 65.0%
! AAATGCCGCAGGGAGTGCGG+TGG + chr4_4:60351914-60351933 None:intergenic 65.0%
GCTGCACAAGGCCAAGCCCA+TGG - chr4_4:60351934-60351953 Msa0692040:intron 65.0%
CACTGTGGTCCAGAGCGTGG+AGG + chr4_4:60352505-60352524 None:intergenic 65.0%
! GAGCACTGTGGTCCAGAGCG+TGG + chr4_4:60352508-60352527 None:intergenic 65.0%
CGCGATTCGCTGTCACGCGC+CGG - chr4_4:60348928-60348947 Msa0692040:three_prime_UTR 70.0%
GCGATTCGCTGTCACGCGCC+GGG - chr4_4:60348929-60348948 Msa0692040:three_prime_UTR 70.0%
TTCGCTGTCACGCGCCGGGA+AGG - chr4_4:60348933-60348952 Msa0692040:three_prime_UTR 70.0%
CACGCGCCGGGAAGGTAGCT+AGG - chr4_4:60348941-60348960 Msa0692040:three_prime_UTR 70.0%
GGGCTGAGTGGGCCAGGTGA+AGG + chr4_4:60349068-60349087 None:intergenic 70.0%
TACCCCCACCGCACTCCCTG+CGG - chr4_4:60351906-60351925 Msa0692040:intron 70.0%
! ATGCCGCAGGGAGTGCGGTG+GGG + chr4_4:60351912-60351931 None:intergenic 70.0%
CGCGATTCGCTGTCACGCGC+CGG - chr4_4:60348928-60348947 Msa0692040:three_prime_UTR 70.0%
GCGATTCGCTGTCACGCGCC+GGG - chr4_4:60348929-60348948 Msa0692040:three_prime_UTR 70.0%
TTCGCTGTCACGCGCCGGGA+AGG - chr4_4:60348933-60348952 Msa0692040:three_prime_UTR 70.0%
CACGCGCCGGGAAGGTAGCT+AGG - chr4_4:60348941-60348960 Msa0692040:three_prime_UTR 70.0%
GGGCTGAGTGGGCCAGGTGA+AGG + chr4_4:60349068-60349087 None:intergenic 70.0%
TACCCCCACCGCACTCCCTG+CGG - chr4_4:60351906-60351925 Msa0692040:intron 70.0%
! ATGCCGCAGGGAGTGCGGTG+GGG + chr4_4:60351912-60351931 None:intergenic 70.0%
GAAGGGGGGCTGAGTGGGCC+AGG + chr4_4:60349074-60349093 None:intergenic 75.0%
! GCAGGGAGTGCGGTGGGGGT+AGG + chr4_4:60351907-60351926 None:intergenic 75.0%
! TGCCGCAGGGAGTGCGGTGG+GGG + chr4_4:60351911-60351930 None:intergenic 75.0%
GAAGGGGGGCTGAGTGGGCC+AGG + chr4_4:60349074-60349093 None:intergenic 75.0%
! GCAGGGAGTGCGGTGGGGGT+AGG + chr4_4:60351907-60351926 None:intergenic 75.0%
! TGCCGCAGGGAGTGCGGTGG+GGG + chr4_4:60351911-60351930 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 60348521 60352618 60348521 ID=Msa0692040;Name=Msa0692040
chr4_4 mRNA 60348521 60352618 60348521 ID=Msa0692040-mRNA-1;Parent=Msa0692040;Name=Msa0692040-mRNA-1;_AED=0.23;_eAED=0.23;_QI=450|0.6|0.83|1|1|1|6|550|271
chr4_4 exon 60348521 60349337 60348521 ID=Msa0692040-mRNA-1:exon:16574;Parent=Msa0692040-mRNA-1
chr4_4 exon 60349509 60349671 60349509 ID=Msa0692040-mRNA-1:exon:16573;Parent=Msa0692040-mRNA-1
chr4_4 exon 60349748 60349825 60349748 ID=Msa0692040-mRNA-1:exon:16572;Parent=Msa0692040-mRNA-1
chr4_4 exon 60350500 60350562 60350500 ID=Msa0692040-mRNA-1:exon:16571;Parent=Msa0692040-mRNA-1
chr4_4 exon 60350705 60350806 60350705 ID=Msa0692040-mRNA-1:exon:16570;Parent=Msa0692040-mRNA-1
chr4_4 exon 60352026 60352618 60352026 ID=Msa0692040-mRNA-1:exon:16569;Parent=Msa0692040-mRNA-1
chr4_4 five_prime_UTR 60352169 60352618 60352169 ID=Msa0692040-mRNA-1:five_prime_utr;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60352026 60352168 60352026 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60350705 60350806 60350705 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60350500 60350562 60350500 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60349748 60349825 60349748 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60349509 60349671 60349509 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 CDS 60349071 60349337 60349071 ID=Msa0692040-mRNA-1:cds;Parent=Msa0692040-mRNA-1
chr4_4 three_prime_UTR 60348521 60349070 60348521 ID=Msa0692040-mRNA-1:three_prime_utr;Parent=Msa0692040-mRNA-1
Gene Sequence

>Msa0692040

ATGGTTTCCCGGGAAAACACGAATTGGATTAACGATTACGGTTTCTATGATGATATTCCCGTTCCCGATTCAACCTTCGCTCTTCCTTCCTCTGCCTTCACCTGGCCCACTCAGCCCCCCTTCAACCTTGCTTCCAATGTCAGTCATATAATAAATGAAAAAACACTCAAGCCAGCTGTAGCATTTTCCCCAATTCCTCATAACATGGGTACATTTGTGGTTGGTACTATTTGCAGTTGCACCATTGCTGAAATTGATGGCTCGTTAGGGGATTCTGACAGTCTCAAAGAGTCTGGTTCAAAGAAGAGGGTTAGATCTGAGTCATGTGCTGCTACTAGCTCCAAAGCATGTCGGGAGAAGTTGCGTAGAGATAGACTTAACGACAAGTTTATTGAACTAGGCTCCATCTTGGAGCCTGGAAGGCCTGCCAAAACCGACAAGGCTGCCATCCTGATTGATGCTGTCCGAATGGTGACACAGTTAAGGGGTGAAGCCCAAAAGTTGAAAGATGCCAACTCGGGTCTTCAAGAAAAGATTAAAGAGTTAAAGGTTGAGAAGAATGAACTTCGTGACGAGAAACAGAGGCTCAAGGCAGAGAAAGAGAAGTTGGAGCAGCAGCTGAAATCAATGAATGCACCACCTAGTTTCTTGCCTACCCCCACCGCACTCCCTGCGGCATTTGCTGCACAAGGCCAAGCCCATGGCAACAAATTGGTACCCTTTATTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTGGATACCTCACAGGATCATGTACTTCGTCCTCCAGTTGCCTAA

Protein sequence

>Msa0692040

MVSRENTNWINDYGFYDDIPVPDSTFALPSSAFTWPTQPPFNLASNVSHIINEKTLKPAVAFSPIPHNMGTFVVGTICSCTIAEIDGSLGDSDSLKESGSKKRVRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILIDAVRMVTQLRGEAQKLKDANSGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAPPSFLPTPTALPAAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA*