AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0525490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0525490 MtrunA17_Chr3g0125051 98.024 506 5 2 1 502 1 505 0.0 1009
Msa0525490 MtrunA17_Chr3g0125041 52.245 490 213 8 30 502 25 510 7.93e-161 466
Msa0525490 MtrunA17_Chr3g0138431 55.000 280 124 1 222 501 198 475 4.97e-106 325
Msa0525490 MtrunA17_Chr1g0152871 53.597 278 124 3 228 501 82 358 1.91e-104 317
Msa0525490 MtrunA17_Chr2g0332171 51.171 299 139 3 204 499 191 485 5.33e-99 306
Msa0525490 MtrunA17_Chr1g0148681 51.852 270 130 0 218 487 137 406 6.71e-98 301
Msa0525490 MtrunA17_Chr2g0332181 51.211 289 140 1 212 500 142 429 3.75e-97 300
Msa0525490 MtrunA17_Chr3g0134401 45.620 274 149 0 228 501 65 338 1.01e-81 257
Msa0525490 MtrunA17_Chr3g0134421 44.484 281 152 2 222 500 71 349 6.23e-79 250
Msa0525490 MtrunA17_Chr3g0134441 50.575 261 127 1 242 500 69 329 6.56e-78 247
Msa0525490 MtrunA17_Chr3g0134411 45.318 267 144 1 237 501 91 357 1.97e-75 242
Msa0525490 MtrunA17_Chr3g0134431 43.852 244 114 3 241 482 13 235 1.63e-61 202
Msa0525490 MtrunA17_Chr5g0441371 43.295 261 137 7 221 478 148 400 5.07e-61 206
Msa0525490 MtrunA17_Chr7g0255771 39.362 282 160 8 217 494 178 452 5.10e-58 199
Msa0525490 MtrunA17_Chr5g0406741 38.194 288 160 8 213 494 145 420 1.08e-57 197
Msa0525490 MtrunA17_Chr8g0370671 36.140 285 170 6 213 494 149 424 3.62e-54 188
Msa0525490 MtrunA17_Chr8g0357001 36.842 228 131 5 241 463 490 709 1.00e-43 164
Msa0525490 MtrunA17_Chr3g0102861 29.392 296 181 9 212 501 3 276 4.69e-30 118
Msa0525490 MtrunA17_Chr3g0102621 30.894 246 154 6 240 479 31 266 1.42e-29 117
Msa0525490 MtrunA17_Chr3g0103471 30.769 260 161 7 240 490 25 274 1.39e-28 114
Msa0525490 MtrunA17_Chr3g0102851 32.883 222 133 6 240 455 35 246 1.23e-27 112
Msa0525490 MtrunA17_Chr3g0102631 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0525490 MtrunA17_Chr3g0102651 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0525490 MtrunA17_Chr3g0102661 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0525490 MtrunA17_Chr3g0102671 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0525490 MtrunA17_Chr5g0418901 41.772 79 46 0 292 370 7 85 2.45e-18 80.1
Msa0525490 MtrunA17_Chr1g0161581 33.898 177 96 6 255 430 362 518 3.37e-17 84.3
Msa0525490 MtrunA17_Chr6g0462911 30.000 230 136 7 266 487 70 282 4.00e-17 82.4
Msa0525490 MtrunA17_Chr6g0462981 30.870 230 136 9 266 487 70 284 5.69e-15 75.9
Msa0525490 MtrunA17_Chr5g0398791 28.571 147 104 1 263 409 27 172 6.68e-15 72.8
Msa0525490 MtrunA17_Chr8g0364521 34.815 135 83 3 249 378 71 205 7.74e-13 69.7
Msa0525490 MtrunA17_Chr5g0412471 29.293 198 128 6 222 408 41 237 3.92e-12 67.8
Msa0525490 MtrunA17_Chr4g0041721 28.194 227 143 12 249 463 69 287 3.73e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0525490 AT1G44110.1 60.040 503 145 7 6 502 7 459 0.0 566
Msa0525490 AT1G77390.1 67.260 281 92 0 220 500 161 441 1.29e-144 422
Msa0525490 AT5G25380.3 54.286 280 128 0 220 499 156 435 1.89e-107 327
Msa0525490 AT5G25380.1 54.286 280 128 0 220 499 156 435 1.89e-107 327
Msa0525490 AT5G25380.4 54.286 280 128 0 220 499 162 441 3.83e-107 327
Msa0525490 AT5G11300.1 53.571 280 130 0 220 499 155 434 2.49e-105 322
Msa0525490 AT5G25380.2 55.894 263 116 0 220 482 156 418 7.25e-105 320
Msa0525490 AT1G80370.1 54.448 281 127 1 220 500 180 459 2.47e-103 317
Msa0525490 AT1G15570.1 55.970 268 118 0 220 487 171 438 4.87e-103 316
Msa0525490 AT1G47230.1 48.318 327 160 2 178 502 43 362 1.96e-102 312
Msa0525490 AT1G47230.2 48.171 328 160 3 178 502 43 363 1.33e-100 307
Msa0525490 AT1G47210.2 49.291 282 141 1 223 502 88 369 4.89e-99 303
Msa0525490 AT5G43080.1 50.000 280 140 0 223 502 73 352 1.84e-98 301
Msa0525490 AT5G43080.2 48.929 280 138 1 223 502 73 347 1.55e-95 293
Msa0525490 AT1G47220.1 48.936 282 142 1 223 502 42 323 1.05e-90 280
Msa0525490 AT5G11300.2 56.422 218 95 0 220 437 155 372 1.10e-85 270
Msa0525490 AT5G06150.1 39.483 271 151 6 220 487 164 424 1.48e-53 187
Msa0525490 AT4G37490.1 36.332 289 167 8 213 494 140 418 4.24e-53 185
Msa0525490 AT3G11520.1 40.075 267 149 7 224 487 143 401 1.76e-52 183
Msa0525490 AT1G76310.1 31.368 424 248 16 83 488 24 422 5.75e-52 182
Msa0525490 AT1G20610.1 35.738 305 177 5 197 488 123 421 1.16e-51 181
Msa0525490 AT2G26760.1 39.326 267 149 8 218 479 108 366 3.69e-51 179
Msa0525490 AT2G17620.1 37.847 288 167 5 202 488 139 415 3.73e-49 175
Msa0525490 AT3G11520.2 42.241 232 123 7 224 452 143 366 1.19e-48 172
Msa0525490 AT4G35620.1 37.269 271 162 4 221 490 155 418 8.96e-48 171
Msa0525490 AT1G16330.1 33.019 318 194 7 162 478 330 629 4.17e-46 171
Msa0525490 AT1G76310.3 29.425 452 248 17 83 488 24 450 4.94e-46 167
Msa0525490 AT1G76310.2 31.959 388 221 16 83 452 24 386 9.98e-46 164
Msa0525490 AT4G35620.2 38.627 233 135 4 221 452 155 380 4.68e-40 149
Msa0525490 AT5G06150.2 43.529 170 93 3 220 388 164 331 7.30e-38 142
Msa0525490 AT1G47210.1 56.190 105 44 1 223 325 88 192 3.53e-36 133
Msa0525490 AT1G76310.4 41.011 178 100 4 208 383 149 323 4.05e-34 132
Msa0525490 AT1G20590.1 39.130 161 92 2 299 459 66 220 1.46e-30 120
Msa0525490 AT1G34460.9 33.908 174 92 4 220 392 240 391 2.41e-19 91.3
Msa0525490 AT1G34460.5 33.908 174 92 4 220 392 254 405 2.53e-19 91.3
Msa0525490 AT1G34460.6 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0525490 AT1G34460.3 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0525490 AT1G34460.8 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0525490 AT1G34460.1 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0525490 AT1G34460.2 33.908 174 92 4 220 392 251 402 2.71e-19 90.9
Msa0525490 AT1G34460.4 33.908 174 92 4 220 392 251 402 2.71e-19 90.9
Msa0525490 AT1G34460.7 33.908 174 92 4 220 392 254 405 2.80e-19 90.9
Msa0525490 AT1G14750.1 30.151 199 128 5 268 462 384 575 5.41e-16 81.3
Msa0525490 AT1G14750.2 30.151 199 128 5 268 462 216 407 1.50e-15 79.0
Msa0525490 AT1G14750.3 29.897 194 125 5 268 457 384 570 2.45e-15 79.3
Msa0525490 AT1G14750.4 30.151 199 127 6 268 462 216 406 2.49e-14 75.5

Find 357 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACAGGCTTGATATATT+TGG 0.102269 3_4:+79025054 Msa0525490:three_prime_UTR
ACATCTACCTAGCAATTATT+TGG 0.119593 3_4:-79024566 None:intergenic
CTTAGCTACCTGAATTAATT+AGG 0.132721 3_4:-79027182 None:intergenic
CCGGTTCACCGGTTCGTTTC+CGG 0.177860 3_4:-79025815 None:intergenic
TTCTAATTTGCCTGCAATTA+AGG 0.195048 3_4:+79024166 Msa0525490:CDS
CTCAAGTGCTGATCTTCTTT+TGG 0.208253 3_4:+79026656 Msa0525490:three_prime_UTR
CACCATCGCCAGACGGAAAA+TGG 0.208864 3_4:-79025528 None:intergenic
ATTGCAGGCAAATTAGAATT+AGG 0.217866 3_4:-79024161 None:intergenic
GGGAAAAGATGTTTAGAAAT+TGG 0.230231 3_4:-79024545 None:intergenic
TACATCGATCGATATCTTTC+TGG 0.240590 3_4:+79023054 Msa0525490:CDS
CTGTATCTCCTACCGGAAAA+TGG 0.260326 3_4:-79026383 None:intergenic
TGCAGGGAAAAGCATATATT+TGG 0.260467 3_4:-79023938 None:intergenic
CGATGGAATGTCGGTTTCTA+TGG 0.268944 3_4:+79021827 Msa0525490:CDS
TTTCCATCGGGGCTAAAATA+TGG 0.281247 3_4:+79025241 Msa0525490:three_prime_UTR
ATCTCAAAGCTTCCACTTCC+CGG 0.305361 3_4:+79025337 Msa0525490:three_prime_UTR
TCTTGGTGAGGGTGATGAAT+TGG 0.314863 3_4:+79026840 Msa0525490:three_prime_UTR
AACGCTTTCCAACTGGGAAT+TGG 0.316927 3_4:-79024381 None:intergenic
TTCACAGGCTTGATATATTT+GGG 0.319302 3_4:+79025055 Msa0525490:three_prime_UTR
TCAACTTCTTGACGAAATTT+CGG 0.322692 3_4:+79025581 Msa0525490:three_prime_UTR
TGCTTCTTCTGCACCATTAG+TGG 0.328106 3_4:+79024496 Msa0525490:three_prime_UTR
GTTTATTGTTAATGTGGATT+TGG 0.328157 3_4:-79024849 None:intergenic
TTGTATTTCTCCTTAATTGC+AGG 0.329888 3_4:-79024176 None:intergenic
TGAAGGAGGGCAGTACTTCT+TGG 0.332711 3_4:-79024303 None:intergenic
CGCCGTAGGGAGTGAGTCTT+CGG 0.333993 3_4:+79026424 Msa0525490:three_prime_UTR
TCAAGAAGCATTTAATTGTT+GGG 0.334159 3_4:-79023439 None:intergenic
TGCTGGCGTTGCCCTTGCTA+AGG 0.338081 3_4:-79026950 None:intergenic
CTCAAGAAGCATTTAATTGT+TGG 0.343496 3_4:-79023440 None:intergenic
TCCTACTACCTTCAATGTTC+CGG 0.344922 3_4:+79021767 Msa0525490:CDS
TCGATCTAACGCTTTCCAAC+TGG 0.347874 3_4:-79024388 None:intergenic
TTCCTCAACCCGGTTCCATT+CGG 0.347978 3_4:+79025301 Msa0525490:three_prime_UTR
CATCTACCTAGCAATTATTT+GGG 0.348054 3_4:-79024565 None:intergenic
GCGATGAATTTGTTGTTTCC+AGG 0.349537 3_4:+79026075 Msa0525490:three_prime_UTR
GTAAACGGCGTCGTAGTATA+TGG 0.353843 3_4:+79026689 Msa0525490:three_prime_UTR
TTAGCTACCTGAATTAATTA+GGG 0.354867 3_4:-79027181 None:intergenic
TGTTCCGGTTTCGAGTAGTA+TGG 0.365772 3_4:+79021782 Msa0525490:CDS
GTTGCTGTTGCTGTTGCTGC+TGG 0.371164 3_4:-79026967 None:intergenic
CCGCATCATTATCAACCTTA+TGG 0.372423 3_4:-79025163 None:intergenic
CATACCCATGGTTTCATTGC+AGG 0.373400 3_4:-79023955 None:intergenic
TTCCAAATCTAACTCTCTTC+CGG 0.374065 3_4:-79025834 None:intergenic
TTGATCCACCCGAATGGAAC+CGG 0.378646 3_4:-79025310 None:intergenic
CTTGGTGAGGGTGATGAATT+GGG 0.379668 3_4:+79026841 Msa0525490:three_prime_UTR
TCCTCAACCCGGTTCCATTC+GGG 0.380283 3_4:+79025302 Msa0525490:three_prime_UTR
TGAGTAATGGATGTGAGATT+TGG 0.383463 3_4:+79026768 Msa0525490:three_prime_UTR
CTTTCTCAACCGCATGGGAC+CGG 0.387357 3_4:-79025690 None:intergenic
TAATGTATAGTAAATAATTA+AGG 0.387366 3_4:-79024898 None:intergenic
TTATCCACATATTCAATATC+AGG 0.391534 3_4:-79021885 None:intergenic
AAGGCCTTCAACAGACTTCA+TGG 0.391707 3_4:+79022734 Msa0525490:CDS
ATCAACTCTCTGCTCAGTTC+TGG 0.392573 3_4:-79024343 None:intergenic
TTGTTTCCAGGTGAAGTTGC+CGG 0.392945 3_4:+79026087 Msa0525490:three_prime_UTR
TACCCGACCCGCGTTGAATC+AGG 0.394302 3_4:+79025925 Msa0525490:three_prime_UTR
TGCACAATGTGGTCTGTAAA+TGG 0.394631 3_4:-79024939 None:intergenic
TTTCAAACCTTGAGAAGGTT+AGG 0.398216 3_4:-79024686 None:intergenic
TCACACGCCCTAATTAATTC+AGG 0.398676 3_4:+79027174 Msa0525490:three_prime_UTR
AACCGGAAGAGAGTTAGATT+TGG 0.399322 3_4:+79025832 Msa0525490:three_prime_UTR
AAACTGATTCAAAGTGGTTC+AGG 0.400842 3_4:-79025280 None:intergenic
AGCACGGTGGCTGGCCAAGT+TGG 0.401342 3_4:-79026248 None:intergenic
CCGGAAACGAACCGGTGAAC+CGG 0.402597 3_4:+79025815 Msa0525490:three_prime_UTR
TTCTCCATGAAGTCTGTTGA+AGG 0.403745 3_4:-79022738 None:intergenic
CATTCTTGTTGAGTTGGAAA+AGG 0.405665 3_4:+79022122 Msa0525490:CDS
CGTCAGTGAGTTGTAATTCT+TGG 0.407418 3_4:+79026823 Msa0525490:three_prime_UTR
TCTGATGTTAAAGCGGTAAC+AGG 0.410705 3_4:-79021316 None:intergenic
TCATAAGAATCTTTACATAA+TGG 0.414825 3_4:-79025479 None:intergenic
TCTGATTCTAATTACCCATC+AGG 0.416400 3_4:+79021966 Msa0525490:CDS
AGTGAGCGGAGGTCGCTTCT+TGG 0.416428 3_4:-79021371 None:intergenic
TTGAATCAGGCGAGATAAAC+GGG 0.418237 3_4:+79025938 Msa0525490:three_prime_UTR
AGGCAGCAATTACAATTACT+TGG 0.421832 3_4:+79023090 Msa0525490:CDS
GTTGAATCAGGCGAGATAAA+CGG 0.424517 3_4:+79025937 Msa0525490:three_prime_UTR
AACTGATAACACATACTTCA+AGG 0.426864 3_4:+79023274 Msa0525490:CDS
TTTGGTGGTGGTTGTGTAAA+CGG 0.426909 3_4:+79026674 Msa0525490:three_prime_UTR
CCTGTACTAACAATGTAGTT+TGG 0.430014 3_4:+79024968 Msa0525490:three_prime_UTR
CTATTCCACCCATCTCAAAT+CGG 0.431303 3_4:-79026454 None:intergenic
AGTTGTTCCTCCTCCTCCAT+TGG 0.434223 3_4:+79021740 Msa0525490:CDS
ACTCATAATTCTTATGAAGA+TGG 0.434923 3_4:-79025094 None:intergenic
CTGGTGTTTACGTAGTGAAC+CGG 0.435407 3_4:-79025750 None:intergenic
CAAAGTGGATGAATTGTTGC+GGG 0.435643 3_4:-79021416 None:intergenic
ATACTCCAACAGAGATAATT+CGG 0.437270 3_4:-79023863 None:intergenic
CAATCCTCAAATGAACAATA+AGG 0.437311 3_4:+79025010 Msa0525490:three_prime_UTR
TTTACACCGGCAACTTCACC+TGG 0.437505 3_4:-79026093 None:intergenic
TTCTTCAACAACGTCGTCAA+TGG 0.439569 3_4:+79021279 Msa0525490:CDS
AAAGCGATCCATTCTCCATC+AGG 0.440483 3_4:+79025379 Msa0525490:three_prime_UTR
TGGGAGAGACAAAACGAGTT+AGG 0.443541 3_4:+79025977 Msa0525490:three_prime_UTR
GCACGGTGGCTGGCCAAGTT+GGG 0.445351 3_4:-79026247 None:intergenic
GCTGGCGTTGCCCTTGCTAA+GGG 0.445478 3_4:-79026949 None:intergenic
GTAGTATATGGTTGGAAAAC+CGG 0.446501 3_4:+79026701 Msa0525490:three_prime_UTR
ACCGTGAGGTTGGATGGTTC+AGG 0.446696 3_4:-79025130 None:intergenic
GAAGATGATGCTATCGCTGC+TGG 0.447584 3_4:+79026908 Msa0525490:three_prime_UTR
AAGAGAGTTAGATTTGGAAC+GGG 0.447749 3_4:+79025838 Msa0525490:three_prime_UTR
GATCGTCATGACCCGGGAAG+TGG 0.448872 3_4:-79025349 None:intergenic
AGGCATTGTTCTTTCCGTCC+AGG 0.448948 3_4:+79025557 Msa0525490:three_prime_UTR
TAGAGACATTCTTGTTGAGT+TGG 0.451678 3_4:+79022116 Msa0525490:CDS
CTCAGTGCTTTCTGAAGCAA+AGG 0.453965 3_4:+79025630 Msa0525490:three_prime_UTR
TCTAGCCAGCCATCCACTAA+TGG 0.455588 3_4:-79024509 None:intergenic
GGGTGTTACCCGATTTGAGA+TGG 0.457240 3_4:+79026445 Msa0525490:three_prime_UTR
TGTGTTTCTGTGAGGTGATT+AGG 0.457467 3_4:+79026588 Msa0525490:three_prime_UTR
AACACAAGACTCTTTCCATC+GGG 0.458022 3_4:+79025229 Msa0525490:three_prime_UTR
CCGCAACAATTCATCCACTT+TGG 0.458460 3_4:+79021417 Msa0525490:CDS
ACCCGAATGGAACCGGGTTG+AGG 0.461448 3_4:-79025303 None:intergenic
ATATATTTGGGTGACCAAGC+AGG 0.462087 3_4:+79025067 Msa0525490:three_prime_UTR
TAATGATGCGGGTTAGAGAT+AGG 0.463618 3_4:+79025175 Msa0525490:three_prime_UTR
ACGGTGAATATTTCACCATA+AGG 0.464654 3_4:+79025148 Msa0525490:three_prime_UTR
TATCGCCGAATTATCTCTGT+TGG 0.464887 3_4:+79023858 Msa0525490:CDS
TGAGGAGATTTGTGCACCTC+AGG 0.464961 3_4:+79023232 Msa0525490:CDS
TACATAATGGATGCCGTTCA+CGG 0.466213 3_4:-79025466 None:intergenic
TGGACCTTATTGTTCATTTG+AGG 0.466996 3_4:-79025014 None:intergenic
AATCAATATAGCACGCATGC+TGG 0.468536 3_4:-79022781 None:intergenic
TTTCTGGGAATCCGATGAAC+AGG 0.469283 3_4:+79023070 Msa0525490:CDS
CTGCACCATTAGTGGATGGC+TGG 0.470191 3_4:+79024504 Msa0525490:three_prime_UTR
TTGAGAGTTTATTGTTAATG+TGG 0.470225 3_4:-79024855 None:intergenic
GTTGCAGAGGAGGTGGATCT+TGG 0.470863 3_4:+79026745 Msa0525490:three_prime_UTR
TGAAGTAGTAGTAATGGCCT+TGG 0.476179 3_4:-79021697 None:intergenic
TGCGTGCTATATTGATTGAT+TGG 0.477631 3_4:+79022787 Msa0525490:CDS
ACATCGATCGATATCTTTCT+GGG 0.477841 3_4:+79023055 Msa0525490:CDS
CCGGTGTACCACGTGTCAGC+TGG 0.479911 3_4:-79026485 None:intergenic
ATTCTTGTTGAGTTGGAAAA+GGG 0.479932 3_4:+79022123 Msa0525490:CDS
AAATAGTTGAGCACGGTGGC+TGG 0.481128 3_4:-79026257 None:intergenic
CCTGGTTAGCAATGAATTCA+AGG 0.481918 3_4:-79026001 None:intergenic
GATTTAACATTCGACAAAGT+AGG 0.483352 3_4:-79021654 None:intergenic
TAATATTGATAATGATTACA+TGG 0.483673 3_4:+79022158 Msa0525490:CDS
TTTCTCAACCGCATGGGACC+GGG 0.485033 3_4:-79025689 None:intergenic
TACTGTCAAATACAATGTAT+CGG 0.485089 3_4:-79023028 None:intergenic
ATCGGAGAGGGAACGACGGT+TGG 0.487237 3_4:-79026200 None:intergenic
ATCGCACTATTTACTTTCAT+CGG 0.488789 3_4:-79026218 None:intergenic
ATGTGAGATTTGGAAGGAAT+TGG 0.490581 3_4:+79026778 Msa0525490:three_prime_UTR
CCAAACTACATTGTTAGTAC+AGG 0.491243 3_4:-79024968 None:intergenic
CTAATTAATTCAGGTAGCTA+AGG 0.493079 3_4:+79027183 Msa0525490:three_prime_UTR
GGGTTGAGATGGTGAGCATT+GGG 0.494084 3_4:+79025958 Msa0525490:three_prime_UTR
CGCCTGATTCAACGCGGGTC+GGG 0.494143 3_4:-79025927 None:intergenic
AAATCCATACTACTCGAAAC+CGG 0.496469 3_4:-79021786 None:intergenic
GGTCGGATACAATGTGCAAC+TGG 0.496813 3_4:-79025405 None:intergenic
AGCATCATCTTCACCACACT+TGG 0.498572 3_4:-79026897 None:intergenic
CTCTTCAACTGCCCTTAGCA+AGG 0.500442 3_4:+79026938 Msa0525490:three_prime_UTR
GGCATTGTTCTTTCCGTCCA+GGG 0.501696 3_4:+79025558 Msa0525490:three_prime_UTR
CGATCTAACGCTTTCCAACT+GGG 0.502736 3_4:-79024387 None:intergenic
CGGGTTGAGATGGTGAGCAT+TGG 0.503026 3_4:+79025957 Msa0525490:three_prime_UTR
ACTCGAAACCGGAACATTGA+AGG 0.503350 3_4:-79021775 None:intergenic
TGTATAGTAAATAATTAAGG+TGG 0.503749 3_4:-79024895 None:intergenic
TGGAATCTCAGACAAAGAAA+AGG 0.505760 3_4:+79022715 Msa0525490:intron
GTGCGATCGTCCACCCAACT+TGG 0.507384 3_4:+79026234 Msa0525490:three_prime_UTR
GAGTCCTGATATTGAATATG+TGG 0.508164 3_4:+79021881 Msa0525490:CDS
CTGAAATCAGCGACGCCGTA+GGG 0.511315 3_4:+79026411 Msa0525490:three_prime_UTR
TGATTTGTATGCTTGTGTAA+AGG 0.511367 3_4:+79024112 Msa0525490:CDS
GGTGTTACCCGATTTGAGAT+GGG 0.512021 3_4:+79026446 Msa0525490:three_prime_UTR
AAAAGGACAAGGACAATCAA+TGG 0.512759 3_4:-79027128 None:intergenic
GTGTTTACGTCAGATTATGC+AGG 0.515147 3_4:-79025211 None:intergenic
GACAAGGACAATCAATGGCT+TGG 0.515924 3_4:-79027123 None:intergenic
GTTCATTTGAGGATTGCCAT+TGG 0.516301 3_4:-79025003 None:intergenic
GAACAATAAGGTCCACCCTT+AGG 0.516534 3_4:+79025022 Msa0525490:three_prime_UTR
GTTTACGTTACTGAGAGAAC+CGG 0.516706 3_4:-79026720 None:intergenic
CTAACTCTCTTCCGGTTCAC+CGG 0.516799 3_4:-79025826 None:intergenic
AGGTGGATCTTGGTGAGTAA+TGG 0.516994 3_4:+79026755 Msa0525490:three_prime_UTR
CCTTGAATTCATTGCTAACC+AGG 0.517424 3_4:+79026001 Msa0525490:three_prime_UTR
GATTAAATACTCACCGTCGC+TGG 0.518095 3_4:+79026530 Msa0525490:three_prime_UTR
ATCGCTTACGTTGAAATGCC+TGG 0.518227 3_4:-79025769 None:intergenic
ATCAATATAGCACGCATGCT+GGG 0.519454 3_4:-79022780 None:intergenic
TATTCCACCCATCTCAAATC+GGG 0.520249 3_4:-79026453 None:intergenic
TATGGTGGTAAAGGTTGGTC+CGG 0.521256 3_4:-79026345 None:intergenic
TCACCGTCGCTGGTGACACT+TGG 0.521972 3_4:+79026540 Msa0525490:three_prime_UTR
TGGACTGCAGTCGCTTCCTA+TGG 0.522242 3_4:-79026363 None:intergenic
CGGAGGTCGCTTCTTGGCAG+AGG 0.523214 3_4:-79021365 None:intergenic
AAGAAAGAAAGAAAAGAGAG+TGG 0.523885 3_4:-79021102 None:intergenic
GCCGTAGGGAGTGAGTCTTC+GGG 0.524195 3_4:+79026425 Msa0525490:three_prime_UTR
TTTCCGTCTGGCGATGGTGA+CGG 0.524911 3_4:+79025532 Msa0525490:three_prime_UTR
TGTAATTGCTGCCTGTTCAT+CGG 0.526154 3_4:-79023081 None:intergenic
GAAGTAGTAGTAATGGCCTT+GGG 0.526382 3_4:-79021696 None:intergenic
ACTGGTCCCCTGATGGAGAA+TGG 0.526653 3_4:-79025387 None:intergenic
GTCGCTTCCTATGGTGGTAA+AGG 0.528712 3_4:-79026354 None:intergenic
TGAGTAAGCATGACAGACTC+GGG 0.529317 3_4:+79024618 Msa0525490:three_prime_UTR
TTAGGCCTCTCAACATTCAC+AGG 0.529361 3_4:+79025040 Msa0525490:three_prime_UTR
CTCTCAATAGAATCAACAGC+TGG 0.529999 3_4:-79021918 None:intergenic
TGCATCCGATCGTCATGACC+CGG 0.530784 3_4:-79025356 None:intergenic
CTATTTACTTTCATCGGAGA+GGG 0.531904 3_4:-79026212 None:intergenic
GCGAGATAAACGGGTTGAGA+TGG 0.532136 3_4:+79025947 Msa0525490:three_prime_UTR
TGAAATATTCACCGTGAGGT+TGG 0.532205 3_4:-79025140 None:intergenic
GAAGAAGCTGCTATAAGTGA+TGG 0.532483 3_4:-79023904 None:intergenic
CAAGAAGCATTTAATTGTTG+GGG 0.532854 3_4:-79023438 None:intergenic
ATATTCACCGTGAGGTTGGA+TGG 0.533164 3_4:-79025136 None:intergenic
CTCTAGCATAAACTGAGGAC+TGG 0.534919 3_4:+79025873 Msa0525490:three_prime_UTR
ACTGTCAAATACAATGTATC+GGG 0.535115 3_4:-79023027 None:intergenic
TAATTGCTAGGTAGATGTAA+TGG 0.535808 3_4:+79024571 Msa0525490:three_prime_UTR
CTTCCTATGGTGGTAAAGGT+TGG 0.535859 3_4:-79026350 None:intergenic
TAAACGAGTTGCAGAGGAGG+TGG 0.535942 3_4:+79026738 Msa0525490:three_prime_UTR
TATATTTGGGTGACCAAGCA+GGG 0.537415 3_4:+79025068 Msa0525490:three_prime_UTR
GGAGCAACCAATGGAGGAGG+AGG 0.539858 3_4:-79021747 None:intergenic
CATAAGGTTGATAATGATGC+GGG 0.540407 3_4:+79025164 Msa0525490:three_prime_UTR
TAATCTTCCTAACCTTCTCA+AGG 0.541304 3_4:+79024679 Msa0525490:three_prime_UTR
ATGAAGATGGAACCCCTGCT+TGG 0.542282 3_4:-79025081 None:intergenic
TCGCCTGATTCAACGCGGGT+CGG 0.542292 3_4:-79025928 None:intergenic
TTTCCGGTAGGAGATACAGC+GGG 0.542707 3_4:+79026387 Msa0525490:three_prime_UTR
GGAAAAGCATATATTTGGCC+AGG 0.545625 3_4:-79023933 None:intergenic
GTGTCAACGCACGAGGATCC+CGG 0.545801 3_4:-79026504 None:intergenic
AGCCCCGCTGTATCTCCTAC+CGG 0.545958 3_4:-79026390 None:intergenic
GTGAGTAAGCATGACAGACT+CGG 0.546127 3_4:+79024617 Msa0525490:three_prime_UTR
AACAGAGTTAGAAGAATCAG+TGG 0.546517 3_4:+79026152 Msa0525490:three_prime_UTR
TCTTCTGCACCATTAGTGGA+TGG 0.546635 3_4:+79024500 Msa0525490:three_prime_UTR
TCATCTCCTGGTAAATCCGA+TGG 0.546673 3_4:+79021810 Msa0525490:CDS
TTGAATGTCCAATTCCCAGT+TGG 0.547557 3_4:+79024373 Msa0525490:three_prime_UTR
ATACCCATGGTTTCATTGCA+GGG 0.547788 3_4:-79023954 None:intergenic
TCTCAAAGCTTCCACTTCCC+GGG 0.551863 3_4:+79025338 Msa0525490:three_prime_UTR
GAAGAAGAATTGCATGGTGA+AGG 0.552536 3_4:-79021603 None:intergenic
GGTGTAATCTACACAGCAGT+TGG 0.553324 3_4:-79025658 None:intergenic
GGTGTAAACGCGTGTAAACC+CGG 0.554717 3_4:+79026108 Msa0525490:three_prime_UTR
GAAATTTCGGTCAACATCGA+TGG 0.555911 3_4:+79025594 Msa0525490:three_prime_UTR
CAGCTGACACGTGGTACACC+GGG 0.557055 3_4:+79026486 Msa0525490:three_prime_UTR
TTGAATCAGTTTCCTCAACC+CGG 0.557376 3_4:+79025291 Msa0525490:three_prime_UTR
CGGTGGCTGGCCAAGTTGGG+TGG 0.557379 3_4:-79026244 None:intergenic
GCATCCGATCGTCATGACCC+GGG 0.558569 3_4:-79025355 None:intergenic
CTTGTAGATATCACAGGCAA+AGG 0.560239 3_4:-79022199 None:intergenic
GGTGAGTTCCGTCGTGAGTG+AGG 0.560303 3_4:+79026286 Msa0525490:three_prime_UTR
AGTATGGATTTATCATCTCC+TGG 0.561386 3_4:+79021798 Msa0525490:CDS
GCATGGGACCGGGTTCGACC+TGG 0.562398 3_4:-79025679 None:intergenic
GTCAAGAAGTTGACCCTGGA+CGG 0.562749 3_4:-79025571 None:intergenic
TGATCCACCCGAATGGAACC+GGG 0.564000 3_4:-79025309 None:intergenic
AGAGATTAACAGAGGGTCCA+TGG 0.564220 3_4:-79025426 None:intergenic
AAATGATGAAGTAGTAGTAA+TGG 0.564314 3_4:-79021703 None:intergenic
GAAGAGAGTTAGATTTGGAA+CGG 0.564617 3_4:+79025837 Msa0525490:three_prime_UTR
TCAACCCGGTTCCATTCGGG+TGG 0.565272 3_4:+79025305 Msa0525490:three_prime_UTR
CTTGCTAAGGGCAGTTGAAG+AGG 0.565862 3_4:-79026937 None:intergenic
AATTCTTGAGGTATTGAAGG+AGG 0.566013 3_4:-79024317 None:intergenic
GTGAGTTGTAATTCTTGGTG+AGG 0.567118 3_4:+79026828 Msa0525490:three_prime_UTR
ACGGCGTCGTAGTATATGGT+TGG 0.567842 3_4:+79026693 Msa0525490:three_prime_UTR
TCTTCAACTGCCCTTAGCAA+GGG 0.567862 3_4:+79026939 Msa0525490:three_prime_UTR
TTTGAGATGGGTGGAATAGA+CGG 0.568439 3_4:+79026458 Msa0525490:three_prime_UTR
TTTCGTCAAGAAGTTGACCC+TGG 0.568457 3_4:-79025575 None:intergenic
CCAGCTGACACGTGGTACAC+CGG 0.569828 3_4:+79026485 Msa0525490:three_prime_UTR
CTGATTCAAAGTGGTTCAGG+TGG 0.570012 3_4:-79025277 None:intergenic
ATTCTTGAGGTATTGAAGGA+GGG 0.570841 3_4:-79024316 None:intergenic
ATGTGACGGAAGCTAGAGCC+AGG 0.571700 3_4:+79026036 Msa0525490:three_prime_UTR
CAATGGCTTTCTCAACCGCA+TGG 0.572392 3_4:-79025696 None:intergenic
AAGCGTTAGATCGACACAAA+GGG 0.573590 3_4:+79024397 Msa0525490:three_prime_UTR
GTCTGGCGATGGTGACGGAA+AGG 0.573602 3_4:+79025537 Msa0525490:three_prime_UTR
GATTTGTGCACCTCAGGTGG+AGG 0.573990 3_4:+79023238 Msa0525490:CDS
AGATTTGTACGTGCAGCTCA+AGG 0.575208 3_4:+79023464 Msa0525490:CDS
CATAGAAACCGACATTCCAT+CGG 0.576594 3_4:-79021826 None:intergenic
GTATAGTAAATAATTAAGGT+GGG 0.577465 3_4:-79024894 None:intergenic
TTTCCCTGCAATGAAACCAT+GGG 0.578311 3_4:+79023951 Msa0525490:CDS
TTGGCATGTTGTTGAGCCAA+TGG 0.579141 3_4:+79024987 Msa0525490:three_prime_UTR
GTAGGAGCAACCAATGGAGG+AGG 0.580454 3_4:-79021750 None:intergenic
GATGTTAAAGCGGTAACAGG+TGG 0.582716 3_4:-79021313 None:intergenic
ATTTATTTGATCCACCCGAA+TGG 0.583814 3_4:-79025316 None:intergenic
GCCGTCGCAACGAGAAGACC+TGG 0.584072 3_4:-79026054 None:intergenic
CGGTTCACTACGTAAACACC+AGG 0.585044 3_4:+79025751 Msa0525490:three_prime_UTR
ATGTGCAACTGGTCCCCTGA+TGG 0.587384 3_4:-79025394 None:intergenic
AAGCACTCTAGTTGTAGTGA+AGG 0.587457 3_4:-79023826 None:intergenic
AGATTACACCAGGTCGAACC+CGG 0.589385 3_4:+79025671 Msa0525490:three_prime_UTR
ATGTTAAAGCGGTAACAGGT+GGG 0.589966 3_4:-79021312 None:intergenic
AGGTTGGTCCGGCGAAGTAG+AGG 0.590368 3_4:-79026334 None:intergenic
AAGCATACAAATCAGAAGGC+TGG 0.591281 3_4:-79024103 None:intergenic
GGGTTTACACGCGTTTACAC+CGG 0.591493 3_4:-79026106 None:intergenic
GTAACAAAATGTAACCTGAT+GGG 0.593425 3_4:-79021980 None:intergenic
AAACACAAGACTCTTTCCAT+CGG 0.593429 3_4:+79025228 Msa0525490:three_prime_UTR
CCAAAGTGGATGAATTGTTG+CGG 0.593438 3_4:-79021417 None:intergenic
ACCGGAACATTGAAGGTAGT+AGG 0.594385 3_4:-79021768 None:intergenic
TGGTAAATCCGATGGAATGT+CGG 0.594531 3_4:+79021818 Msa0525490:CDS
TTCAAAGTGGTTCAGGTGGG+AGG 0.597857 3_4:-79025273 None:intergenic
GTTACCCGATTTGAGATGGG+TGG 0.599375 3_4:+79026449 Msa0525490:three_prime_UTR
AGTGAGATCCTCTACTTCGC+CGG 0.599693 3_4:+79026326 Msa0525490:three_prime_UTR
CAAGCATCTACGTGCATCTG+AGG 0.600841 3_4:+79022218 Msa0525490:CDS
CCATAAGGTTGATAATGATG+CGG 0.601624 3_4:+79025163 Msa0525490:three_prime_UTR
TGGTGTTTACGTAGTGAACC+GGG 0.601869 3_4:-79025749 None:intergenic
GCTGAAATCAGCGACGCCGT+AGG 0.602043 3_4:+79026410 Msa0525490:three_prime_UTR
GAATTGGCCGTTGAAATTGA+CGG 0.602106 3_4:+79026794 Msa0525490:three_prime_UTR
TAACACATACTTCAAGGATG+AGG 0.602249 3_4:+79023280 Msa0525490:CDS
ATTGATTGATTGGCTAGTGG+AGG 0.603421 3_4:+79022797 Msa0525490:CDS
GACATTCCATCGGATTTACC+AGG 0.603450 3_4:-79021816 None:intergenic
GCCAGGTCTTCTCGTTGCGA+CGG 0.603694 3_4:+79026053 Msa0525490:three_prime_UTR
CAAACTACATTGTTAGTACA+GGG 0.603915 3_4:-79024967 None:intergenic
GGAGATTTGTGCACCTCAGG+TGG 0.604989 3_4:+79023235 Msa0525490:CDS
GGACCAACCTTTACCACCAT+AGG 0.605783 3_4:+79026347 Msa0525490:three_prime_UTR
CAGCTGTTGATTCTATTGAG+AGG 0.606902 3_4:+79021919 Msa0525490:CDS
GAGTATATGTGTGGATGAAG+AGG 0.607174 3_4:+79027032 Msa0525490:three_prime_UTR
ACTGCAGTCGCTTCCTATGG+TGG 0.607219 3_4:-79026360 None:intergenic
AAGCGATCCATTCTCCATCA+GGG 0.608545 3_4:+79025380 Msa0525490:three_prime_UTR
CGATAAGATAAAGTGAGACG+TGG 0.610037 3_4:+79027098 Msa0525490:three_prime_UTR
TGTGAATGTTGAGAGGCCTA+AGG 0.611126 3_4:-79025038 None:intergenic
ACTTCCCGGGTCATGACGAT+CGG 0.612635 3_4:+79025351 Msa0525490:three_prime_UTR
GCAAAGGTAGCACAGAGTTG+AGG 0.614108 3_4:-79022183 None:intergenic
TCACATCGAATTGTTCGACC+TGG 0.614521 3_4:-79026019 None:intergenic
ATCGAACGAGTTACACCACC+GGG 0.614798 3_4:-79026126 None:intergenic
ACACAAGCATACAAATCAGA+AGG 0.618369 3_4:-79024107 None:intergenic
ACCTGAACCATCCAACCTCA+CGG 0.618847 3_4:+79025129 Msa0525490:three_prime_UTR
CTTCATGGAGAAAATTCAGA+AGG 0.619401 3_4:+79022749 Msa0525490:CDS
TCACTCACGACGGAACTCAC+CGG 0.621307 3_4:-79026284 None:intergenic
TAGATGCTTGTAGATATCAC+AGG 0.621919 3_4:-79022205 None:intergenic
AATCTACGTGTCAACGCACG+AGG 0.623806 3_4:-79026511 None:intergenic
GTGAGGGTGATGAATTGGGA+GGG 0.624915 3_4:+79026845 Msa0525490:three_prime_UTR
AATGGCTTTCTCAACCGCAT+GGG 0.628096 3_4:-79025695 None:intergenic
AATTAGAATCAGAAATGTTG+AGG 0.628229 3_4:-79021956 None:intergenic
ACTATTTACTTTCATCGGAG+AGG 0.631119 3_4:-79026213 None:intergenic
ACCCGAAGACTCACTCCCTA+CGG 0.633343 3_4:-79026426 None:intergenic
GTGAATGTTGAGAGGCCTAA+GGG 0.633649 3_4:-79025037 None:intergenic
GGACACTCCGTCAATTTCAA+CGG 0.634749 3_4:-79026801 None:intergenic
GGTCGAACAATTCGATGTGA+CGG 0.634875 3_4:+79026022 Msa0525490:three_prime_UTR
TATATTGATTGATTGGCTAG+TGG 0.635001 3_4:+79022794 Msa0525490:CDS
ATTAACAGAGGGTCCATGGT+CGG 0.636917 3_4:-79025422 None:intergenic
TGAGTTGTAATTCTTGGTGA+GGG 0.638117 3_4:+79026829 Msa0525490:three_prime_UTR
TGAGTGTAATGCTGCAATGT+CGG 0.639670 3_4:-79024077 None:intergenic
AGGTCGCTTCTTGGCAGAGG+CGG 0.640133 3_4:-79021362 None:intergenic
AGCACTCTAGTTGTAGTGAA+GGG 0.640504 3_4:-79023825 None:intergenic
ATGTGGTCTGTAAATGGTGA+TGG 0.641573 3_4:-79024933 None:intergenic
TAGGACTGTTGCAACAAAGA+CGG 0.642862 3_4:-79024142 None:intergenic
TTGGTGAGGTTAGTGAGCGG+AGG 0.642894 3_4:-79021382 None:intergenic
GTCGGGTATCACAAGTGCAG+AGG 0.643154 3_4:-79025910 None:intergenic
TTTCCGTCACCATCGCCAGA+CGG 0.643830 3_4:-79025535 None:intergenic
AAGGTAGTAGGAGCAACCAA+TGG 0.644249 3_4:-79021756 None:intergenic
AAAGCGTTAGATCGACACAA+AGG 0.644624 3_4:+79024396 Msa0525490:three_prime_UTR
ACGTAAACGAGTTGCAGAGG+AGG 0.645778 3_4:+79026735 Msa0525490:three_prime_UTR
TATCTCGCCTGATTCAACGC+GGG 0.645965 3_4:-79025932 None:intergenic
CATCGAACGAGTTACACCAC+CGG 0.646119 3_4:-79026127 None:intergenic
AGCGATCCATTCTCCATCAG+GGG 0.647416 3_4:+79025381 Msa0525490:three_prime_UTR
AAACCAAGTGTCACCAGCGA+CGG 0.647626 3_4:-79026543 None:intergenic
GTAGTAGGAGCAACCAATGG+AGG 0.650466 3_4:-79021753 None:intergenic
GTGAGGTGATTAGGCAACAG+AGG 0.652977 3_4:+79026597 Msa0525490:three_prime_UTR
GTAACGTAAACGAGTTGCAG+AGG 0.653307 3_4:+79026732 Msa0525490:three_prime_UTR
TTGAGGAAACTGATTCAAAG+TGG 0.654694 3_4:-79025286 None:intergenic
ATATTTGGGTGACCAAGCAG+GGG 0.655465 3_4:+79025069 Msa0525490:three_prime_UTR
TTGCACATTGTATCCGACCA+TGG 0.655497 3_4:+79025409 Msa0525490:three_prime_UTR
GTAGTTAGCTCTGCCAAGTG+TGG 0.656194 3_4:+79026884 Msa0525490:three_prime_UTR
TGATTCAAAGTGGTTCAGGT+GGG 0.658589 3_4:-79025276 None:intergenic
TAACAAAATTCCTCCACCTG+AGG 0.658688 3_4:-79023248 None:intergenic
TGATTGGTGAGGTTAGTGAG+CGG 0.659282 3_4:-79021385 None:intergenic
AATACAAAGGTAGAATACAA+AGG 0.659652 3_4:+79024826 Msa0525490:three_prime_UTR
TCAAGCCTGTGAATGTTGAG+AGG 0.661021 3_4:-79025045 None:intergenic
GAGCTTGAAGAAGAATTGCA+TGG 0.661998 3_4:-79021609 None:intergenic
GACTGTTGCAACAAAGACGG+TGG 0.666327 3_4:-79024139 None:intergenic
TAAGCGATTCTGTCTCCAGA+GGG 0.666512 3_4:+79025784 Msa0525490:three_prime_UTR
CGGTACAAAATAGTTGAGCA+CGG 0.669587 3_4:-79026264 None:intergenic
GTTGTTCTCTGATGTTAAAG+CGG 0.669653 3_4:-79021323 None:intergenic
TGCAGCTCAAGGAATTGATG+AGG 0.672914 3_4:+79023475 Msa0525490:CDS
TAATGGATGTGAGATTTGGA+AGG 0.673471 3_4:+79026772 Msa0525490:three_prime_UTR
ACTGCTGTGTAGATTACACC+AGG 0.674326 3_4:+79025661 Msa0525490:three_prime_UTR
GGTGAGGGTGATGAATTGGG+AGG 0.676824 3_4:+79026844 Msa0525490:three_prime_UTR
AGGTCGAACCCGGTCCCATG+CGG 0.679189 3_4:+79025681 Msa0525490:three_prime_UTR
CAAGAATTACAACTCACTGA+CGG 0.682641 3_4:-79026822 None:intergenic
TATGACCTGATCGACCAGAA+CGG 0.684219 3_4:+79025497 Msa0525490:three_prime_UTR
AGAGAGTTAGATTTGGAACG+GGG 0.688808 3_4:+79025839 Msa0525490:three_prime_UTR
GTAAGCGATTCTGTCTCCAG+AGG 0.689173 3_4:+79025783 Msa0525490:three_prime_UTR
GTTTACGTAGTGAACCGGGA+CGG 0.690796 3_4:-79025745 None:intergenic
ATGGTGAAATATTCACCGTG+AGG 0.692339 3_4:-79025144 None:intergenic
ACGGCAGTCCAGCTGACACG+TGG 0.692685 3_4:+79026477 Msa0525490:three_prime_UTR
TATGTGTGGATGAAGAGGAG+AGG 0.693236 3_4:+79027037 Msa0525490:three_prime_UTR
CGGGCTTAAGAGATTAACAG+AGG 0.696246 3_4:-79025434 None:intergenic
CTTTGCTTCAGAAAGCACTG+AGG 0.697797 3_4:-79025629 None:intergenic
TTCCGGTAGGAGATACAGCG+GGG 0.698891 3_4:+79026388 Msa0525490:three_prime_UTR
GGAGAAATACAATCAGCACA+AGG 0.701897 3_4:+79024187 Msa0525490:CDS
GGGCTTAAGAGATTAACAGA+GGG 0.706815 3_4:-79025433 None:intergenic
TTAACATCAGAGAACAACGC+CGG 0.712549 3_4:+79021328 Msa0525490:CDS
AATGTTGAGAGGCCTAAGGG+TGG 0.712549 3_4:-79025034 None:intergenic
TTTCATCGGAGAGGGAACGA+CGG 0.712613 3_4:-79026204 None:intergenic
GAGTAAGCATGACAGACTCG+GGG 0.716325 3_4:+79024619 Msa0525490:three_prime_UTR
TTATCTCGCCTGATTCAACG+CGG 0.721298 3_4:-79025933 None:intergenic
ACAGGGCTACATGCACAATG+TGG 0.743092 3_4:-79024950 None:intergenic
GTTGAGACTGTGTTTCTGTG+AGG 0.743197 3_4:+79026580 Msa0525490:three_prime_UTR
GATTACATGAACTAGCACAA+TGG 0.747721 3_4:-79024661 None:intergenic
ACATTCTCTAGCATAAACTG+AGG 0.757075 3_4:+79025868 Msa0525490:three_prime_UTR
ACACAAGACTCTTTCCATCG+GGG 0.760389 3_4:+79025230 Msa0525490:three_prime_UTR
TACAAAATAGTTGAGCACGG+TGG 0.775482 3_4:-79026261 None:intergenic
GTAAACGCGTGTAAACCCGG+TGG 0.796307 3_4:+79026111 Msa0525490:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTGTTATTTATGA+AGG - chr3_4:79021058-79021077 None:intergenic 10.0%
!!! GAATTCATTTTTATTATTTT+TGG + chr3_4:79023200-79023219 Msa0525490:intron 10.0%
!! TAATGTATAGTAAATAATTA+AGG - chr3_4:79024901-79024920 None:intergenic 10.0%
!!! TAATATTGATAATGATTACA+TGG + chr3_4:79022158-79022177 Msa0525490:CDS 15.0%
!!! TTTTTAATTGGTGATTTATA+AGG + chr3_4:79023507-79023526 Msa0525490:intron 15.0%
!! AAGACAAAAATTTGAAAAAA+AGG - chr3_4:79027148-79027167 None:intergenic 15.0%
!! TAGAAAAAAAAATACCAAAG+TGG - chr3_4:79021434-79021453 None:intergenic 20.0%
!!! AATCTTTAAAGAAGATGAAA+GGG - chr3_4:79021457-79021476 None:intergenic 20.0%
!!! ATTATAACGATTTTGGAATT+GGG + chr3_4:79021532-79021551 Msa0525490:intron 20.0%
!! TTAATAACTGTTCTGATATA+TGG + chr3_4:79022322-79022341 Msa0525490:intron 20.0%
!! ACTAGTTAGTGAAAAAAATT+GGG + chr3_4:79022428-79022447 Msa0525490:intron 20.0%
!! AATCAACTCTATATTCTAAT+TGG - chr3_4:79022933-79022952 None:intergenic 20.0%
!!! TCTTATATTGTTTTATCTCT+AGG + chr3_4:79023164-79023183 Msa0525490:intron 20.0%
!! ATTCGTTCTCTAATTATAAT+GGG - chr3_4:79024006-79024025 None:intergenic 20.0%
!!! TTGTATTGTGTAAACTTTTT+TGG - chr3_4:79024813-79024832 None:intergenic 20.0%
!! AAAAAGTTTACACAATACAA+AGG + chr3_4:79024813-79024832 Msa0525490:three_prime_UTR 20.0%
!! GTATAGTAAATAATTAAGGT+GGG - chr3_4:79024897-79024916 None:intergenic 20.0%
!! TGTATAGTAAATAATTAAGG+TGG - chr3_4:79024898-79024917 None:intergenic 20.0%
!! TCATAAGAATCTTTACATAA+TGG - chr3_4:79025482-79025501 None:intergenic 20.0%
!! AAAATTTGAAAAAAAGGACA+AGG - chr3_4:79027142-79027161 None:intergenic 20.0%
!!! AACTTCTTTTACTTTTGCTA+TGG - chr3_4:79021177-79021196 None:intergenic 25.0%
!! GAATCTTTAAAGAAGATGAA+AGG - chr3_4:79021458-79021477 None:intergenic 25.0%
! ATCACGCATAAAATTCAAAT+GGG - chr3_4:79021514-79021533 None:intergenic 25.0%
! AATCACGCATAAAATTCAAA+TGG - chr3_4:79021515-79021534 None:intergenic 25.0%
!!! GATTATAACGATTTTGGAAT+TGG + chr3_4:79021531-79021550 Msa0525490:intron 25.0%
! AAATGATGAAGTAGTAGTAA+TGG - chr3_4:79021706-79021725 None:intergenic 25.0%
! TTATCCACATATTCAATATC+AGG - chr3_4:79021888-79021907 None:intergenic 25.0%
! AATTAGAATCAGAAATGTTG+AGG - chr3_4:79021959-79021978 None:intergenic 25.0%
!!! CTAATGATTGATTTGTTTTC+AGG + chr3_4:79022081-79022100 Msa0525490:intron 25.0%
! AATATAGATCATTGTCAACA+GGG - chr3_4:79022258-79022277 None:intergenic 25.0%
! AAACTCAAAATTAATGCCTT+TGG - chr3_4:79022304-79022323 None:intergenic 25.0%
! CACTAGTTAGTGAAAAAAAT+TGG + chr3_4:79022427-79022446 Msa0525490:intron 25.0%
!!! TTATTATTGTTTTTACAGCC+AGG + chr3_4:79022615-79022634 Msa0525490:intron 25.0%
!! CTTATCTTTTCCAAATTTTC+TGG + chr3_4:79022695-79022714 Msa0525490:intron 25.0%
! TTGAATCAAAATGTAGGAAT+TGG - chr3_4:79022860-79022879 None:intergenic 25.0%
! GACTAATTGAATCAAAATGT+AGG - chr3_4:79022866-79022885 None:intergenic 25.0%
!!! TTTTGATTCAATTAGTCATG+TGG + chr3_4:79022869-79022888 Msa0525490:intron 25.0%
! TACTGTCAAATACAATGTAT+CGG - chr3_4:79023031-79023050 None:intergenic 25.0%
!!! TATTTTTGGCAGTAAATATG+AGG + chr3_4:79023214-79023233 Msa0525490:intron 25.0%
!!! TCAAGAAGCATTTAATTGTT+GGG - chr3_4:79023442-79023461 None:intergenic 25.0%
!!! AGGTATGTTCTGTTTTTAAT+TGG + chr3_4:79023495-79023514 Msa0525490:intron 25.0%
! TAGCATTCATTTGTATGTTA+TGG + chr3_4:79023725-79023744 Msa0525490:intron 25.0%
! AAGGGTCAATAATTTAGAAA+TGG - chr3_4:79023775-79023794 None:intergenic 25.0%
!!! AATTATTGACCCTTTTTTCT+TGG + chr3_4:79023781-79023800 Msa0525490:intron 25.0%
! CAAATGAAACCAAGAAAAAA+GGG - chr3_4:79023793-79023812 None:intergenic 25.0%
! GATTCGTTCTCTAATTATAA+TGG - chr3_4:79024007-79024026 None:intergenic 25.0%
!!! AAAAATTCTTGAGGTATTGA+AGG - chr3_4:79024323-79024342 None:intergenic 25.0%
!!! TATTGTGTAAACTTTTTTGG+TGG - chr3_4:79024810-79024829 None:intergenic 25.0%
! AATACAAAGGTAGAATACAA+AGG + chr3_4:79024826-79024845 Msa0525490:three_prime_UTR 25.0%
! GTTTATTGTTAATGTGGATT+TGG - chr3_4:79024852-79024871 None:intergenic 25.0%
! TTGAGAGTTTATTGTTAATG+TGG - chr3_4:79024858-79024877 None:intergenic 25.0%
! ACTCATAATTCTTATGAAGA+TGG - chr3_4:79025097-79025116 None:intergenic 25.0%
!!! ACTAATTTTGAGTATATGTG+TGG + chr3_4:79027023-79027042 Msa0525490:three_prime_UTR 25.0%
! TTAGCTACCTGAATTAATTA+GGG - chr3_4:79027184-79027203 None:intergenic 25.0%
AAGAAAGAAAGAAAAGAGAG+TGG - chr3_4:79021105-79021124 None:intergenic 30.0%
! ATGCGTGATTATAACGATTT+TGG + chr3_4:79021525-79021544 Msa0525490:intron 30.0%
!! TGGGTTGTTGTTAATTTTGT+AGG + chr3_4:79021551-79021570 Msa0525490:intron 30.0%
GATTTAACATTCGACAAAGT+AGG - chr3_4:79021657-79021676 None:intergenic 30.0%
! ACTACTACTTCATCATTTTC+TGG + chr3_4:79021708-79021727 Msa0525490:CDS 30.0%
GTAACAAAATGTAACCTGAT+GGG - chr3_4:79021983-79022002 None:intergenic 30.0%
AGTAACAAAATGTAACCTGA+TGG - chr3_4:79021984-79022003 None:intergenic 30.0%
!!! GATTACCCTTTTGATTTTAC+TGG + chr3_4:79022041-79022060 Msa0525490:intron 30.0%
ATGCACCAGTAAAATCAAAA+GGG - chr3_4:79022049-79022068 None:intergenic 30.0%
AATGCACCAGTAAAATCAAA+AGG - chr3_4:79022050-79022069 None:intergenic 30.0%
!! ATTCTTGTTGAGTTGGAAAA+GGG + chr3_4:79022123-79022142 Msa0525490:CDS 30.0%
ATATAGATCATTGTCAACAG+GGG - chr3_4:79022257-79022276 None:intergenic 30.0%
CAATATAGATCATTGTCAAC+AGG - chr3_4:79022259-79022278 None:intergenic 30.0%
! TACATTTTATCCTTTGCCAA+AGG + chr3_4:79022285-79022304 Msa0525490:intron 30.0%
AAAATTAATGCCTTTGGCAA+AGG - chr3_4:79022298-79022317 None:intergenic 30.0%
! ATTAATCACTTAAGAGTGCA+TGG + chr3_4:79022556-79022575 Msa0525490:intron 30.0%
!! AATTTGTTACATTACTGTCC+TGG - chr3_4:79022636-79022655 None:intergenic 30.0%
! TATATTGATTGATTGGCTAG+TGG + chr3_4:79022794-79022813 Msa0525490:CDS 30.0%
AATTAGTCATGTGGTCAATT+TGG + chr3_4:79022878-79022897 Msa0525490:intron 30.0%
ACTGTCAAATACAATGTATC+GGG - chr3_4:79023030-79023049 None:intergenic 30.0%
AACTGATAACACATACTTCA+AGG + chr3_4:79023274-79023293 Msa0525490:CDS 30.0%
TTAGATTTGCAAGCTTCAAA+TGG - chr3_4:79023347-79023366 None:intergenic 30.0%
TAAAGCAAATCATTTCATGC+AGG + chr3_4:79023364-79023383 Msa0525490:intron 30.0%
!! CAAGAAGCATTTAATTGTTG+GGG - chr3_4:79023441-79023460 None:intergenic 30.0%
!! CTCAAGAAGCATTTAATTGT+TGG - chr3_4:79023443-79023462 None:intergenic 30.0%
ATCTCATCAAATGTGAGAAA+TGG - chr3_4:79023706-79023725 None:intergenic 30.0%
GCAAATGAAACCAAGAAAAA+AGG - chr3_4:79023794-79023813 None:intergenic 30.0%
ATACTCCAACAGAGATAATT+CGG - chr3_4:79023866-79023885 None:intergenic 30.0%
! TGATTTGTATGCTTGTGTAA+AGG + chr3_4:79024112-79024131 Msa0525490:CDS 30.0%
ATTGCAGGCAAATTAGAATT+AGG - chr3_4:79024164-79024183 None:intergenic 30.0%
! TTCTAATTTGCCTGCAATTA+AGG + chr3_4:79024166-79024185 Msa0525490:CDS 30.0%
TTGTATTTCTCCTTAATTGC+AGG - chr3_4:79024179-79024198 None:intergenic 30.0%
GGGAAAAGATGTTTAGAAAT+TGG - chr3_4:79024548-79024567 None:intergenic 30.0%
! TCTTTTCCCAAATAATTGCT+AGG + chr3_4:79024559-79024578 Msa0525490:three_prime_UTR 30.0%
CATCTACCTAGCAATTATTT+GGG - chr3_4:79024568-79024587 None:intergenic 30.0%
ACATCTACCTAGCAATTATT+TGG - chr3_4:79024569-79024588 None:intergenic 30.0%
TAATTGCTAGGTAGATGTAA+TGG + chr3_4:79024571-79024590 Msa0525490:three_prime_UTR 30.0%
CAAACTACATTGTTAGTACA+GGG - chr3_4:79024970-79024989 None:intergenic 30.0%
ATTCACAGGCTTGATATATT+TGG + chr3_4:79025054-79025073 Msa0525490:three_prime_UTR 30.0%
TTCACAGGCTTGATATATTT+GGG + chr3_4:79025055-79025074 Msa0525490:three_prime_UTR 30.0%
TCAACTTCTTGACGAAATTT+CGG + chr3_4:79025581-79025600 Msa0525490:three_prime_UTR 30.0%
AAAAAAGGTTTCTGATGCAA+TGG - chr3_4:79025716-79025735 None:intergenic 30.0%
!!! TTGCATCAGAAACCTTTTTT+CGG + chr3_4:79025716-79025735 Msa0525490:three_prime_UTR 30.0%
ATCGCACTATTTACTTTCAT+CGG - chr3_4:79026221-79026240 None:intergenic 30.0%
! GCAGATTACATTTTATTAGC+AGG + chr3_4:79027061-79027080 Msa0525490:three_prime_UTR 30.0%
CTTAGCTACCTGAATTAATT+AGG - chr3_4:79027185-79027204 None:intergenic 30.0%
CTAATTAATTCAGGTAGCTA+AGG + chr3_4:79027183-79027202 Msa0525490:three_prime_UTR 30.0%
! AGGAATTGTGCTTTTGATGA+GGG - chr3_4:79021038-79021057 None:intergenic 35.0%
! AAGGAATTGTGCTTTTGATG+AGG - chr3_4:79021039-79021058 None:intergenic 35.0%
GTTGTTCTCTGATGTTAAAG+CGG - chr3_4:79021326-79021345 None:intergenic 35.0%
! TACTGTGAATGTTTTTCCCA+AGG + chr3_4:79021680-79021699 Msa0525490:CDS 35.0%
! CTACTTCATCATTTTCTGGA+AGG + chr3_4:79021712-79021731 Msa0525490:CDS 35.0%
AAATCCATACTACTCGAAAC+CGG - chr3_4:79021789-79021808 None:intergenic 35.0%
AGTATGGATTTATCATCTCC+TGG + chr3_4:79021798-79021817 Msa0525490:CDS 35.0%
GAGTCCTGATATTGAATATG+TGG + chr3_4:79021881-79021900 Msa0525490:CDS 35.0%
TCTGATTCTAATTACCCATC+AGG + chr3_4:79021966-79021985 Msa0525490:CDS 35.0%
TAGAGACATTCTTGTTGAGT+TGG + chr3_4:79022116-79022135 Msa0525490:CDS 35.0%
!! CATTCTTGTTGAGTTGGAAA+AGG + chr3_4:79022122-79022141 Msa0525490:CDS 35.0%
TAGATGCTTGTAGATATCAC+AGG - chr3_4:79022208-79022227 None:intergenic 35.0%
TGATTAATGAGCTTCAACGA+AGG - chr3_4:79022544-79022563 None:intergenic 35.0%
! GTCTGAGATTCCAGAAAATT+TGG - chr3_4:79022708-79022727 None:intergenic 35.0%
TGGAATCTCAGACAAAGAAA+AGG + chr3_4:79022715-79022734 Msa0525490:intron 35.0%
CTTCATGGAGAAAATTCAGA+AGG + chr3_4:79022749-79022768 Msa0525490:CDS 35.0%
! TGCGTGCTATATTGATTGAT+TGG + chr3_4:79022787-79022806 Msa0525490:CDS 35.0%
CTTGTGGTCAATTAGTTATG+TGG + chr3_4:79022828-79022847 Msa0525490:intron 35.0%
GATAATTAGCACACACAAAG+AGG - chr3_4:79022962-79022981 None:intergenic 35.0%
CTATATCTATTTCCAACTGC+AGG + chr3_4:79022981-79023000 Msa0525490:intron 35.0%
TACATCGATCGATATCTTTC+TGG + chr3_4:79023054-79023073 Msa0525490:CDS 35.0%
ACATCGATCGATATCTTTCT+GGG + chr3_4:79023055-79023074 Msa0525490:CDS 35.0%
AGGCAGCAATTACAATTACT+TGG + chr3_4:79023090-79023109 Msa0525490:CDS 35.0%
TAACACATACTTCAAGGATG+AGG + chr3_4:79023280-79023299 Msa0525490:CDS 35.0%
GAGGTTTGTGTTGAATTCTT+TGG + chr3_4:79023299-79023318 Msa0525490:intron 35.0%
GATGCAAGCTAAGAAGTAAT+TGG + chr3_4:79023613-79023632 Msa0525490:intron 35.0%
GGCACATGACTCTAATTATT+AGG + chr3_4:79023746-79023765 Msa0525490:intron 35.0%
! TGCAGGGAAAAGCATATATT+TGG - chr3_4:79023941-79023960 None:intergenic 35.0%
TTTCCTTTGCTTAACATGCT+TGG + chr3_4:79024033-79024052 Msa0525490:intron 35.0%
ACACAAGCATACAAATCAGA+AGG - chr3_4:79024110-79024129 None:intergenic 35.0%
!! ATTCTTGAGGTATTGAAGGA+GGG - chr3_4:79024319-79024338 None:intergenic 35.0%
!! AATTCTTGAGGTATTGAAGG+AGG - chr3_4:79024320-79024339 None:intergenic 35.0%
!! CAGTTCTGGAAAAATTCTTG+AGG - chr3_4:79024332-79024351 None:intergenic 35.0%
GATTACATGAACTAGCACAA+TGG - chr3_4:79024664-79024683 None:intergenic 35.0%
TAATCTTCCTAACCTTCTCA+AGG + chr3_4:79024679-79024698 Msa0525490:three_prime_UTR 35.0%
TTTCAAACCTTGAGAAGGTT+AGG - chr3_4:79024689-79024708 None:intergenic 35.0%
!! CTGTTTTTCAAACCTTGAGA+AGG - chr3_4:79024694-79024713 None:intergenic 35.0%
AGGTGGGATGTAAAAATTGT+AGG - chr3_4:79024881-79024900 None:intergenic 35.0%
CCAAACTACATTGTTAGTAC+AGG - chr3_4:79024971-79024990 None:intergenic 35.0%
CCTGTACTAACAATGTAGTT+TGG + chr3_4:79024968-79024987 Msa0525490:three_prime_UTR 35.0%
ACGGTGAATATTTCACCATA+AGG + chr3_4:79025148-79025167 Msa0525490:three_prime_UTR 35.0%
!! CCATAAGGTTGATAATGATG+CGG + chr3_4:79025163-79025182 Msa0525490:three_prime_UTR 35.0%
!! CATAAGGTTGATAATGATGC+GGG + chr3_4:79025164-79025183 Msa0525490:three_prime_UTR 35.0%
AAACACAAGACTCTTTCCAT+CGG + chr3_4:79025228-79025247 Msa0525490:three_prime_UTR 35.0%
! AAACTGATTCAAAGTGGTTC+AGG - chr3_4:79025283-79025302 None:intergenic 35.0%
! TTGAGGAAACTGATTCAAAG+TGG - chr3_4:79025289-79025308 None:intergenic 35.0%
ATTTATTTGATCCACCCGAA+TGG - chr3_4:79025319-79025338 None:intergenic 35.0%
!!! AAATGGATTGTTTTCCGTTC+TGG - chr3_4:79025514-79025533 None:intergenic 35.0%
! AAAACAATCCATTTTCCGTC+TGG + chr3_4:79025520-79025539 Msa0525490:three_prime_UTR 35.0%
TTCCAAATCTAACTCTCTTC+CGG - chr3_4:79025837-79025856 None:intergenic 35.0%
GAAGAGAGTTAGATTTGGAA+CGG + chr3_4:79025837-79025856 Msa0525490:three_prime_UTR 35.0%
! AAGAGAGTTAGATTTGGAAC+GGG + chr3_4:79025838-79025857 Msa0525490:three_prime_UTR 35.0%
ACATTCTCTAGCATAAACTG+AGG + chr3_4:79025868-79025887 Msa0525490:three_prime_UTR 35.0%
AACAGAGTTAGAAGAATCAG+TGG + chr3_4:79026152-79026171 Msa0525490:three_prime_UTR 35.0%
CTATTTACTTTCATCGGAGA+GGG - chr3_4:79026215-79026234 None:intergenic 35.0%
ACTATTTACTTTCATCGGAG+AGG - chr3_4:79026216-79026235 None:intergenic 35.0%
GTAGTATATGGTTGGAAAAC+CGG + chr3_4:79026701-79026720 Msa0525490:three_prime_UTR 35.0%
!! TGAGTAATGGATGTGAGATT+TGG + chr3_4:79026768-79026787 Msa0525490:three_prime_UTR 35.0%
! TAATGGATGTGAGATTTGGA+AGG + chr3_4:79026772-79026791 Msa0525490:three_prime_UTR 35.0%
ATGTGAGATTTGGAAGGAAT+TGG + chr3_4:79026778-79026797 Msa0525490:three_prime_UTR 35.0%
CAAGAATTACAACTCACTGA+CGG - chr3_4:79026825-79026844 None:intergenic 35.0%
TGAGTTGTAATTCTTGGTGA+GGG + chr3_4:79026829-79026848 Msa0525490:three_prime_UTR 35.0%
AAAAGGACAAGGACAATCAA+TGG - chr3_4:79027131-79027150 None:intergenic 35.0%
! AATTGTGCTTTTGATGAGGG+GGG - chr3_4:79021035-79021054 None:intergenic 40.0%
! GAATTGTGCTTTTGATGAGG+GGG - chr3_4:79021036-79021055 None:intergenic 40.0%
! GGAATTGTGCTTTTGATGAG+GGG - chr3_4:79021037-79021056 None:intergenic 40.0%
!! TCAGAGCGTTTCTTTTGCTT+TGG - chr3_4:79021152-79021171 None:intergenic 40.0%
TTCTTCAACAACGTCGTCAA+TGG + chr3_4:79021279-79021298 Msa0525490:CDS 40.0%
ATGTTAAAGCGGTAACAGGT+GGG - chr3_4:79021315-79021334 None:intergenic 40.0%
TCTGATGTTAAAGCGGTAAC+AGG - chr3_4:79021319-79021338 None:intergenic 40.0%
TTAACATCAGAGAACAACGC+CGG + chr3_4:79021328-79021347 Msa0525490:CDS 40.0%
!!! GGGAAGAATTTTGATTGGTG+AGG - chr3_4:79021399-79021418 None:intergenic 40.0%
!! GTTGCGGGAAGAATTTTGAT+TGG - chr3_4:79021404-79021423 None:intergenic 40.0%
CAAAGTGGATGAATTGTTGC+GGG - chr3_4:79021419-79021438 None:intergenic 40.0%
CCAAAGTGGATGAATTGTTG+CGG - chr3_4:79021420-79021439 None:intergenic 40.0%
GAAGAAGAATTGCATGGTGA+AGG - chr3_4:79021606-79021625 None:intergenic 40.0%
GAGCTTGAAGAAGAATTGCA+TGG - chr3_4:79021612-79021631 None:intergenic 40.0%
GGGAAAAACATTCACAGTAG+CGG - chr3_4:79021679-79021698 None:intergenic 40.0%
GAAGTAGTAGTAATGGCCTT+GGG - chr3_4:79021699-79021718 None:intergenic 40.0%
TGAAGTAGTAGTAATGGCCT+TGG - chr3_4:79021700-79021719 None:intergenic 40.0%
TCCTACTACCTTCAATGTTC+CGG + chr3_4:79021767-79021786 Msa0525490:CDS 40.0%
TGGTAAATCCGATGGAATGT+CGG + chr3_4:79021818-79021837 Msa0525490:CDS 40.0%
CATAGAAACCGACATTCCAT+CGG - chr3_4:79021829-79021848 None:intergenic 40.0%
CTCTCAATAGAATCAACAGC+TGG - chr3_4:79021921-79021940 None:intergenic 40.0%
!! CAGCTGTTGATTCTATTGAG+AGG + chr3_4:79021919-79021938 Msa0525490:CDS 40.0%
CTTGTAGATATCACAGGCAA+AGG - chr3_4:79022202-79022221 None:intergenic 40.0%
!! TTTAACCCTCCGTTTTTCGA+GGG + chr3_4:79022451-79022470 Msa0525490:intron 40.0%
AATTTCCCTCGAAAAACGGA+GGG - chr3_4:79022459-79022478 None:intergenic 40.0%
!!! TCCGTTTTTCGAGGGAAATT+GGG + chr3_4:79022459-79022478 Msa0525490:intron 40.0%
ACCCAATTTCCCTCGAAAAA+CGG - chr3_4:79022463-79022482 None:intergenic 40.0%
TCTAGCTAGGAGAGTAAACT+TGG + chr3_4:79022500-79022519 Msa0525490:intron 40.0%
TTCTCCATGAAGTCTGTTGA+AGG - chr3_4:79022741-79022760 None:intergenic 40.0%
ATCAATATAGCACGCATGCT+GGG - chr3_4:79022783-79022802 None:intergenic 40.0%
AATCAATATAGCACGCATGC+TGG - chr3_4:79022784-79022803 None:intergenic 40.0%
! ATTGATTGATTGGCTAGTGG+AGG + chr3_4:79022797-79022816 Msa0525490:CDS 40.0%
AGTGGAGGTAATGTTTCTTG+TGG + chr3_4:79022812-79022831 Msa0525490:intron 40.0%
TATCTATTTCCAACTGCAGG+TGG + chr3_4:79022984-79023003 Msa0525490:intron 40.0%
TGTAATTGCTGCCTGTTCAT+CGG - chr3_4:79023084-79023103 None:intergenic 40.0%
TCTATGATGATTGCCTCGTA+AGG + chr3_4:79023120-79023139 Msa0525490:intron 40.0%
AAGTTGTATGCTTCCTTACG+AGG - chr3_4:79023136-79023155 None:intergenic 40.0%
TAACAAAATTCCTCCACCTG+AGG - chr3_4:79023251-79023270 None:intergenic 40.0%
! TTTCATGCAGGTTTTGCAGA+TGG + chr3_4:79023376-79023395 Msa0525490:intron 40.0%
TGCTCGTGTTTGAACATCTA+TGG - chr3_4:79023547-79023566 None:intergenic 40.0%
CTTGCATCATGTGTTCTTAC+AGG - chr3_4:79023601-79023620 None:intergenic 40.0%
TGGTTTCATTTGCATTGCTC+AGG + chr3_4:79023801-79023820 Msa0525490:intron 40.0%
AGCACTCTAGTTGTAGTGAA+GGG - chr3_4:79023828-79023847 None:intergenic 40.0%
AAGCACTCTAGTTGTAGTGA+AGG - chr3_4:79023829-79023848 None:intergenic 40.0%
TATCGCCGAATTATCTCTGT+TGG + chr3_4:79023858-79023877 Msa0525490:CDS 40.0%
GAAGAAGCTGCTATAAGTGA+TGG - chr3_4:79023907-79023926 None:intergenic 40.0%
! AGCAGCTTCTTCAATTTTCC+TGG + chr3_4:79023915-79023934 Msa0525490:CDS 40.0%
! GGAAAAGCATATATTTGGCC+AGG - chr3_4:79023936-79023955 None:intergenic 40.0%
! TTTTCCCTGCAATGAAACCA+TGG + chr3_4:79023950-79023969 Msa0525490:CDS 40.0%
TTTCCCTGCAATGAAACCAT+GGG + chr3_4:79023951-79023970 Msa0525490:CDS 40.0%
ATACCCATGGTTTCATTGCA+GGG - chr3_4:79023957-79023976 None:intergenic 40.0%
CAACCAAGCATGTTAAGCAA+AGG - chr3_4:79024039-79024058 None:intergenic 40.0%
TGAGTGTAATGCTGCAATGT+CGG - chr3_4:79024080-79024099 None:intergenic 40.0%
AAGCATACAAATCAGAAGGC+TGG - chr3_4:79024106-79024125 None:intergenic 40.0%
TAGGACTGTTGCAACAAAGA+CGG - chr3_4:79024145-79024164 None:intergenic 40.0%
GGAGAAATACAATCAGCACA+AGG + chr3_4:79024187-79024206 Msa0525490:CDS 40.0%
TTGAATGTCCAATTCCCAGT+TGG + chr3_4:79024373-79024392 Msa0525490:three_prime_UTR 40.0%
! AAAGCGTTAGATCGACACAA+AGG + chr3_4:79024396-79024415 Msa0525490:three_prime_UTR 40.0%
AAGCGTTAGATCGACACAAA+GGG + chr3_4:79024397-79024416 Msa0525490:three_prime_UTR 40.0%
!!! TCTTGAAGCGTCGATTTTGT+GGG - chr3_4:79024454-79024473 None:intergenic 40.0%
!!! TTCTTGAAGCGTCGATTTTG+TGG - chr3_4:79024455-79024474 None:intergenic 40.0%
ATGTGGTCTGTAAATGGTGA+TGG - chr3_4:79024936-79024955 None:intergenic 40.0%
TGCACAATGTGGTCTGTAAA+TGG - chr3_4:79024942-79024961 None:intergenic 40.0%
ATATATTTGGGTGACCAAGC+AGG + chr3_4:79025067-79025086 Msa0525490:three_prime_UTR 40.0%
TATATTTGGGTGACCAAGCA+GGG + chr3_4:79025068-79025087 Msa0525490:three_prime_UTR 40.0%
TGAAATATTCACCGTGAGGT+TGG - chr3_4:79025143-79025162 None:intergenic 40.0%
ATGGTGAAATATTCACCGTG+AGG - chr3_4:79025147-79025166 None:intergenic 40.0%
CCGCATCATTATCAACCTTA+TGG - chr3_4:79025166-79025185 None:intergenic 40.0%
!! TAATGATGCGGGTTAGAGAT+AGG + chr3_4:79025175-79025194 Msa0525490:three_prime_UTR 40.0%
GTGTTTACGTCAGATTATGC+AGG - chr3_4:79025214-79025233 None:intergenic 40.0%
AACACAAGACTCTTTCCATC+GGG + chr3_4:79025229-79025248 Msa0525490:three_prime_UTR 40.0%
TTTCCATCGGGGCTAAAATA+TGG + chr3_4:79025241-79025260 Msa0525490:three_prime_UTR 40.0%
TGATTCAAAGTGGTTCAGGT+GGG - chr3_4:79025279-79025298 None:intergenic 40.0%
TTGAATCAGTTTCCTCAACC+CGG + chr3_4:79025291-79025310 Msa0525490:three_prime_UTR 40.0%
GGGCTTAAGAGATTAACAGA+GGG - chr3_4:79025436-79025455 None:intergenic 40.0%
!! TACATAATGGATGCCGTTCA+CGG - chr3_4:79025469-79025488 None:intergenic 40.0%
GAAATTTCGGTCAACATCGA+TGG + chr3_4:79025594-79025613 Msa0525490:three_prime_UTR 40.0%
TGAAAAAACCGGAAACGAAC+CGG + chr3_4:79025807-79025826 Msa0525490:three_prime_UTR 40.0%
AACCGGAAGAGAGTTAGATT+TGG + chr3_4:79025832-79025851 Msa0525490:three_prime_UTR 40.0%
! AGAGAGTTAGATTTGGAACG+GGG + chr3_4:79025839-79025858 Msa0525490:three_prime_UTR 40.0%
GTTGAATCAGGCGAGATAAA+CGG + chr3_4:79025937-79025956 Msa0525490:three_prime_UTR 40.0%
TTGAATCAGGCGAGATAAAC+GGG + chr3_4:79025938-79025957 Msa0525490:three_prime_UTR 40.0%
CCTGGTTAGCAATGAATTCA+AGG - chr3_4:79026004-79026023 None:intergenic 40.0%
CCTTGAATTCATTGCTAACC+AGG + chr3_4:79026001-79026020 Msa0525490:three_prime_UTR 40.0%
!! GCGATGAATTTGTTGTTTCC+AGG + chr3_4:79026075-79026094 Msa0525490:three_prime_UTR 40.0%
TACAAAATAGTTGAGCACGG+TGG - chr3_4:79026264-79026283 None:intergenic 40.0%
CGGTACAAAATAGTTGAGCA+CGG - chr3_4:79026267-79026286 None:intergenic 40.0%
! CGTGCTCAACTATTTTGTAC+CGG + chr3_4:79026265-79026284 Msa0525490:three_prime_UTR 40.0%
TATTCCACCCATCTCAAATC+GGG - chr3_4:79026456-79026475 None:intergenic 40.0%
CTATTCCACCCATCTCAAAT+CGG - chr3_4:79026457-79026476 None:intergenic 40.0%
! TTTGAGATGGGTGGAATAGA+CGG + chr3_4:79026458-79026477 Msa0525490:three_prime_UTR 40.0%
! TGTGTTTCTGTGAGGTGATT+AGG + chr3_4:79026588-79026607 Msa0525490:three_prime_UTR 40.0%
!!! CTCAAGTGCTGATCTTCTTT+TGG + chr3_4:79026656-79026675 Msa0525490:three_prime_UTR 40.0%
!!! AAGTGCTGATCTTCTTTTGG+TGG + chr3_4:79026659-79026678 Msa0525490:three_prime_UTR 40.0%
!! TTTGGTGGTGGTTGTGTAAA+CGG + chr3_4:79026674-79026693 Msa0525490:three_prime_UTR 40.0%
GTTTACGTTACTGAGAGAAC+CGG - chr3_4:79026723-79026742 None:intergenic 40.0%
GAATTGGCCGTTGAAATTGA+CGG + chr3_4:79026794-79026813 Msa0525490:three_prime_UTR 40.0%
CGTCAGTGAGTTGTAATTCT+TGG + chr3_4:79026823-79026842 Msa0525490:three_prime_UTR 40.0%
GTGAGTTGTAATTCTTGGTG+AGG + chr3_4:79026828-79026847 Msa0525490:three_prime_UTR 40.0%
GAGTATATGTGTGGATGAAG+AGG + chr3_4:79027032-79027051 Msa0525490:three_prime_UTR 40.0%
CGATAAGATAAAGTGAGACG+TGG + chr3_4:79027098-79027117 Msa0525490:three_prime_UTR 40.0%
TCACACGCCCTAATTAATTC+AGG + chr3_4:79027174-79027193 Msa0525490:three_prime_UTR 40.0%
GATGTTAAAGCGGTAACAGG+TGG - chr3_4:79021316-79021335 None:intergenic 45.0%
TGATTGGTGAGGTTAGTGAG+CGG - chr3_4:79021388-79021407 None:intergenic 45.0%
CCGCAACAATTCATCCACTT+TGG + chr3_4:79021417-79021436 Msa0525490:CDS 45.0%
AAGGTAGTAGGAGCAACCAA+TGG - chr3_4:79021759-79021778 None:intergenic 45.0%
ACCGGAACATTGAAGGTAGT+AGG - chr3_4:79021771-79021790 None:intergenic 45.0%
ACTCGAAACCGGAACATTGA+AGG - chr3_4:79021778-79021797 None:intergenic 45.0%
! TGTTCCGGTTTCGAGTAGTA+TGG + chr3_4:79021782-79021801 Msa0525490:CDS 45.0%
TCATCTCCTGGTAAATCCGA+TGG + chr3_4:79021810-79021829 Msa0525490:CDS 45.0%
GACATTCCATCGGATTTACC+AGG - chr3_4:79021819-79021838 None:intergenic 45.0%
!! CGATGGAATGTCGGTTTCTA+TGG + chr3_4:79021827-79021846 Msa0525490:CDS 45.0%
!! GTTTAACCCTCCGTTTTTCG+AGG + chr3_4:79022450-79022469 Msa0525490:intron 45.0%
CAATTTCCCTCGAAAAACGG+AGG - chr3_4:79022460-79022479 None:intergenic 45.0%
!!! CTCCGTTTTTCGAGGGAAAT+TGG + chr3_4:79022458-79022477 Msa0525490:intron 45.0%
GAAGTCTGATTGCTCTAGCT+AGG + chr3_4:79022487-79022506 Msa0525490:intron 45.0%
CAACGAAGGTCAGATCGATT+CGG - chr3_4:79022530-79022549 None:intergenic 45.0%
AAGGCCTTCAACAGACTTCA+TGG + chr3_4:79022734-79022753 Msa0525490:CDS 45.0%
! TTTCTGGGAATCCGATGAAC+AGG + chr3_4:79023070-79023089 Msa0525490:CDS 45.0%
AGATTTGTACGTGCAGCTCA+AGG + chr3_4:79023464-79023483 Msa0525490:CDS 45.0%
TGCAGCTCAAGGAATTGATG+AGG + chr3_4:79023475-79023494 Msa0525490:CDS 45.0%
CATACCCATGGTTTCATTGC+AGG - chr3_4:79023958-79023977 None:intergenic 45.0%
ATCAACTCTCTGCTCAGTTC+TGG - chr3_4:79024346-79024365 None:intergenic 45.0%
AACGCTTTCCAACTGGGAAT+TGG - chr3_4:79024384-79024403 None:intergenic 45.0%
CGATCTAACGCTTTCCAACT+GGG - chr3_4:79024390-79024409 None:intergenic 45.0%
TCGATCTAACGCTTTCCAAC+TGG - chr3_4:79024391-79024410 None:intergenic 45.0%
TGCTTCTTCTGCACCATTAG+TGG + chr3_4:79024496-79024515 Msa0525490:three_prime_UTR 45.0%
TCTTCTGCACCATTAGTGGA+TGG + chr3_4:79024500-79024519 Msa0525490:three_prime_UTR 45.0%
GTGAGTAAGCATGACAGACT+CGG + chr3_4:79024617-79024636 Msa0525490:three_prime_UTR 45.0%
TGAGTAAGCATGACAGACTC+GGG + chr3_4:79024618-79024637 Msa0525490:three_prime_UTR 45.0%
TTGGCATGTTGTTGAGCCAA+TGG + chr3_4:79024987-79025006 Msa0525490:three_prime_UTR 45.0%
GAACAATAAGGTCCACCCTT+AGG + chr3_4:79025022-79025041 Msa0525490:three_prime_UTR 45.0%
GTGAATGTTGAGAGGCCTAA+GGG - chr3_4:79025040-79025059 None:intergenic 45.0%
TGTGAATGTTGAGAGGCCTA+AGG - chr3_4:79025041-79025060 None:intergenic 45.0%
TTAGGCCTCTCAACATTCAC+AGG + chr3_4:79025040-79025059 Msa0525490:three_prime_UTR 45.0%
TCAAGCCTGTGAATGTTGAG+AGG - chr3_4:79025048-79025067 None:intergenic 45.0%
ATATTTGGGTGACCAAGCAG+GGG + chr3_4:79025069-79025088 Msa0525490:three_prime_UTR 45.0%
ATATTCACCGTGAGGTTGGA+TGG - chr3_4:79025139-79025158 None:intergenic 45.0%
ACACAAGACTCTTTCCATCG+GGG + chr3_4:79025230-79025249 Msa0525490:three_prime_UTR 45.0%
!!! CATCCATATTTTAGCCCCGA+TGG - chr3_4:79025247-79025266 None:intergenic 45.0%
CTGATTCAAAGTGGTTCAGG+TGG - chr3_4:79025280-79025299 None:intergenic 45.0%
ATCTCAAAGCTTCCACTTCC+CGG + chr3_4:79025337-79025356 Msa0525490:three_prime_UTR 45.0%
AAAGCGATCCATTCTCCATC+AGG + chr3_4:79025379-79025398 Msa0525490:three_prime_UTR 45.0%
AAGCGATCCATTCTCCATCA+GGG + chr3_4:79025380-79025399 Msa0525490:three_prime_UTR 45.0%
TTGCACATTGTATCCGACCA+TGG + chr3_4:79025409-79025428 Msa0525490:three_prime_UTR 45.0%
ATTAACAGAGGGTCCATGGT+CGG - chr3_4:79025425-79025444 None:intergenic 45.0%
AGAGATTAACAGAGGGTCCA+TGG - chr3_4:79025429-79025448 None:intergenic 45.0%
CGGGCTTAAGAGATTAACAG+AGG - chr3_4:79025437-79025456 None:intergenic 45.0%
TATGACCTGATCGACCAGAA+CGG + chr3_4:79025497-79025516 Msa0525490:three_prime_UTR 45.0%
TTTCGTCAAGAAGTTGACCC+TGG - chr3_4:79025578-79025597 None:intergenic 45.0%
!! CTTTGCTTCAGAAAGCACTG+AGG - chr3_4:79025632-79025651 None:intergenic 45.0%
!! CTCAGTGCTTTCTGAAGCAA+AGG + chr3_4:79025630-79025649 Msa0525490:three_prime_UTR 45.0%
GGTGTAATCTACACAGCAGT+TGG - chr3_4:79025661-79025680 None:intergenic 45.0%
ACTGCTGTGTAGATTACACC+AGG + chr3_4:79025661-79025680 Msa0525490:three_prime_UTR 45.0%
AATGGCTTTCTCAACCGCAT+GGG - chr3_4:79025698-79025717 None:intergenic 45.0%
TGGTGTTTACGTAGTGAACC+GGG - chr3_4:79025752-79025771 None:intergenic 45.0%
CTGGTGTTTACGTAGTGAAC+CGG - chr3_4:79025753-79025772 None:intergenic 45.0%
ATCGCTTACGTTGAAATGCC+TGG - chr3_4:79025772-79025791 None:intergenic 45.0%
TAAGCGATTCTGTCTCCAGA+GGG + chr3_4:79025784-79025803 Msa0525490:three_prime_UTR 45.0%
TCTCCAGAGGGTGAAAAAAC+CGG + chr3_4:79025796-79025815 Msa0525490:three_prime_UTR 45.0%
!!! TTTCCGGTTTTTTCACCCTC+TGG - chr3_4:79025802-79025821 None:intergenic 45.0%
CTCTAGCATAAACTGAGGAC+TGG + chr3_4:79025873-79025892 Msa0525490:three_prime_UTR 45.0%
TTATCTCGCCTGATTCAACG+CGG - chr3_4:79025936-79025955 None:intergenic 45.0%
TGGGAGAGACAAAACGAGTT+AGG + chr3_4:79025977-79025996 Msa0525490:three_prime_UTR 45.0%
TCACATCGAATTGTTCGACC+TGG - chr3_4:79026022-79026041 None:intergenic 45.0%
GGTCGAACAATTCGATGTGA+CGG + chr3_4:79026022-79026041 Msa0525490:three_prime_UTR 45.0%
TTGTTTCCAGGTGAAGTTGC+CGG + chr3_4:79026087-79026106 Msa0525490:three_prime_UTR 45.0%
! TACGTTTTCCTCACTCACGA+CGG - chr3_4:79026297-79026316 None:intergenic 45.0%
! TATGGTGGTAAAGGTTGGTC+CGG - chr3_4:79026348-79026367 None:intergenic 45.0%
CTTCCTATGGTGGTAAAGGT+TGG - chr3_4:79026353-79026372 None:intergenic 45.0%
CTGTATCTCCTACCGGAAAA+TGG - chr3_4:79026386-79026405 None:intergenic 45.0%
! TTTTCCGGTAGGAGATACAG+CGG + chr3_4:79026386-79026405 Msa0525490:three_prime_UTR 45.0%
! GGTGTTACCCGATTTGAGAT+GGG + chr3_4:79026446-79026465 Msa0525490:three_prime_UTR 45.0%
GATTAAATACTCACCGTCGC+TGG + chr3_4:79026530-79026549 Msa0525490:three_prime_UTR 45.0%
! GTTGAGACTGTGTTTCTGTG+AGG + chr3_4:79026580-79026599 Msa0525490:three_prime_UTR 45.0%
! TGCTGATCTTCTTTTGGTGG+TGG + chr3_4:79026662-79026681 Msa0525490:three_prime_UTR 45.0%
GTAAACGGCGTCGTAGTATA+TGG + chr3_4:79026689-79026708 Msa0525490:three_prime_UTR 45.0%
GTAACGTAAACGAGTTGCAG+AGG + chr3_4:79026732-79026751 Msa0525490:three_prime_UTR 45.0%
AGGTGGATCTTGGTGAGTAA+TGG + chr3_4:79026755-79026774 Msa0525490:three_prime_UTR 45.0%
GGACACTCCGTCAATTTCAA+CGG - chr3_4:79026804-79026823 None:intergenic 45.0%
TCTTGGTGAGGGTGATGAAT+TGG + chr3_4:79026840-79026859 Msa0525490:three_prime_UTR 45.0%
CTTGGTGAGGGTGATGAATT+GGG + chr3_4:79026841-79026860 Msa0525490:three_prime_UTR 45.0%
AGCATCATCTTCACCACACT+TGG - chr3_4:79026900-79026919 None:intergenic 45.0%
TCTTCAACTGCCCTTAGCAA+GGG + chr3_4:79026939-79026958 Msa0525490:three_prime_UTR 45.0%
TATGTGTGGATGAAGAGGAG+AGG + chr3_4:79027037-79027056 Msa0525490:three_prime_UTR 45.0%
GACAAGGACAATCAATGGCT+TGG - chr3_4:79027126-79027145 None:intergenic 45.0%
TTTGATGAGGGGGGAAGTGA+AGG - chr3_4:79021026-79021045 None:intergenic 50.0%
! AGAGGCGGCTAAGACTTTTC+CGG - chr3_4:79021350-79021369 None:intergenic 50.0%
AGTTGTTCCTCCTCCTCCAT+TGG + chr3_4:79021740-79021759 Msa0525490:CDS 50.0%
GTAGTAGGAGCAACCAATGG+AGG - chr3_4:79021756-79021775 None:intergenic 50.0%
GCAAAGGTAGCACAGAGTTG+AGG - chr3_4:79022186-79022205 None:intergenic 50.0%
CAAGCATCTACGTGCATCTG+AGG + chr3_4:79022218-79022237 Msa0525490:CDS 50.0%
TGAGGAGATTTGTGCACCTC+AGG + chr3_4:79023232-79023251 Msa0525490:CDS 50.0%
CGTCATTAGCAGCATACCCA+TGG - chr3_4:79023970-79023989 None:intergenic 50.0%
GACTGTTGCAACAAAGACGG+TGG - chr3_4:79024142-79024161 None:intergenic 50.0%
TGAAGGAGGGCAGTACTTCT+TGG - chr3_4:79024306-79024325 None:intergenic 50.0%
!!! TGAAGCGTCGATTTTGTGGG+CGG - chr3_4:79024451-79024470 None:intergenic 50.0%
TCTAGCCAGCCATCCACTAA+TGG - chr3_4:79024512-79024531 None:intergenic 50.0%
GAGTAAGCATGACAGACTCG+GGG + chr3_4:79024619-79024638 Msa0525490:three_prime_UTR 50.0%
ACAGGGCTACATGCACAATG+TGG - chr3_4:79024953-79024972 None:intergenic 50.0%
AATGTTGAGAGGCCTAAGGG+TGG - chr3_4:79025037-79025056 None:intergenic 50.0%
ATGAAGATGGAACCCCTGCT+TGG - chr3_4:79025084-79025103 None:intergenic 50.0%
ACCTGAACCATCCAACCTCA+CGG + chr3_4:79025129-79025148 Msa0525490:three_prime_UTR 50.0%
TTCAAAGTGGTTCAGGTGGG+AGG - chr3_4:79025276-79025295 None:intergenic 50.0%
TTCCTCAACCCGGTTCCATT+CGG + chr3_4:79025301-79025320 Msa0525490:three_prime_UTR 50.0%
TTGATCCACCCGAATGGAAC+CGG - chr3_4:79025313-79025332 None:intergenic 50.0%
TCTCAAAGCTTCCACTTCCC+GGG + chr3_4:79025338-79025357 Msa0525490:three_prime_UTR 50.0%
AGCGATCCATTCTCCATCAG+GGG + chr3_4:79025381-79025400 Msa0525490:three_prime_UTR 50.0%
GGTCGGATACAATGTGCAAC+TGG - chr3_4:79025408-79025427 None:intergenic 50.0%
CCGTTCACGGAGAGAAAAAC+GGG - chr3_4:79025456-79025475 None:intergenic 50.0%
!! CCCGTTTTTCTCTCCGTGAA+CGG + chr3_4:79025453-79025472 Msa0525490:three_prime_UTR 50.0%
GCCGTTCACGGAGAGAAAAA+CGG - chr3_4:79025457-79025476 None:intergenic 50.0%
! GTTTTCCGTTCTGGTCGATC+AGG - chr3_4:79025505-79025524 None:intergenic 50.0%
! ATCCATTTTCCGTCTGGCGA+TGG + chr3_4:79025526-79025545 Msa0525490:three_prime_UTR 50.0%
! AGGCATTGTTCTTTCCGTCC+AGG + chr3_4:79025557-79025576 Msa0525490:three_prime_UTR 50.0%
GGCATTGTTCTTTCCGTCCA+GGG + chr3_4:79025558-79025577 Msa0525490:three_prime_UTR 50.0%
GTCAAGAAGTTGACCCTGGA+CGG - chr3_4:79025574-79025593 None:intergenic 50.0%
AGATTACACCAGGTCGAACC+CGG + chr3_4:79025671-79025690 Msa0525490:three_prime_UTR 50.0%
CAATGGCTTTCTCAACCGCA+TGG - chr3_4:79025699-79025718 None:intergenic 50.0%
GGACGGTTCGAACCGAAAAA+AGG - chr3_4:79025731-79025750 None:intergenic 50.0%
!! TTTTTCGGTTCGAACCGTCC+CGG + chr3_4:79025731-79025750 Msa0525490:three_prime_UTR 50.0%
GTTTACGTAGTGAACCGGGA+CGG - chr3_4:79025748-79025767 None:intergenic 50.0%
CGGTTCACTACGTAAACACC+AGG + chr3_4:79025751-79025770 Msa0525490:three_prime_UTR 50.0%
GTAAGCGATTCTGTCTCCAG+AGG + chr3_4:79025783-79025802 Msa0525490:three_prime_UTR 50.0%
CTAACTCTCTTCCGGTTCAC+CGG - chr3_4:79025829-79025848 None:intergenic 50.0%
TATCTCGCCTGATTCAACGC+GGG - chr3_4:79025935-79025954 None:intergenic 50.0%
!! GCGAGATAAACGGGTTGAGA+TGG + chr3_4:79025947-79025966 Msa0525490:three_prime_UTR 50.0%
GGGTTGAGATGGTGAGCATT+GGG + chr3_4:79025958-79025977 Msa0525490:three_prime_UTR 50.0%
TTTACACCGGCAACTTCACC+TGG - chr3_4:79026096-79026115 None:intergenic 50.0%
GGGTTTACACGCGTTTACAC+CGG - chr3_4:79026109-79026128 None:intergenic 50.0%
GGTGTAAACGCGTGTAAACC+CGG + chr3_4:79026108-79026127 Msa0525490:three_prime_UTR 50.0%
ATCGAACGAGTTACACCACC+GGG - chr3_4:79026129-79026148 None:intergenic 50.0%
CATCGAACGAGTTACACCAC+CGG - chr3_4:79026130-79026149 None:intergenic 50.0%
TTTCATCGGAGAGGGAACGA+CGG - chr3_4:79026207-79026226 None:intergenic 50.0%
AAATAGTTGAGCACGGTGGC+TGG - chr3_4:79026260-79026279 None:intergenic 50.0%
AGTGAGATCCTCTACTTCGC+CGG + chr3_4:79026326-79026345 Msa0525490:three_prime_UTR 50.0%
GGACCAACCTTTACCACCAT+AGG + chr3_4:79026347-79026366 Msa0525490:three_prime_UTR 50.0%
GTCGCTTCCTATGGTGGTAA+AGG - chr3_4:79026357-79026376 None:intergenic 50.0%
! AGCGACTGCAGTCCATTTTC+CGG + chr3_4:79026371-79026390 Msa0525490:three_prime_UTR 50.0%
! ACTGCAGTCCATTTTCCGGT+AGG + chr3_4:79026375-79026394 Msa0525490:three_prime_UTR 50.0%
TTTCCGGTAGGAGATACAGC+GGG + chr3_4:79026387-79026406 Msa0525490:three_prime_UTR 50.0%
! GGGTGTTACCCGATTTGAGA+TGG + chr3_4:79026445-79026464 Msa0525490:three_prime_UTR 50.0%
! GTTACCCGATTTGAGATGGG+TGG + chr3_4:79026449-79026468 Msa0525490:three_prime_UTR 50.0%
AATCTACGTGTCAACGCACG+AGG - chr3_4:79026514-79026533 None:intergenic 50.0%
AAACCAAGTGTCACCAGCGA+CGG - chr3_4:79026546-79026565 None:intergenic 50.0%
GTGAGGTGATTAGGCAACAG+AGG + chr3_4:79026597-79026616 Msa0525490:three_prime_UTR 50.0%
ACGGCGTCGTAGTATATGGT+TGG + chr3_4:79026693-79026712 Msa0525490:three_prime_UTR 50.0%
ACGTAAACGAGTTGCAGAGG+AGG + chr3_4:79026735-79026754 Msa0525490:three_prime_UTR 50.0%
TAAACGAGTTGCAGAGGAGG+TGG + chr3_4:79026738-79026757 Msa0525490:three_prime_UTR 50.0%
GTGAGGGTGATGAATTGGGA+GGG + chr3_4:79026845-79026864 Msa0525490:three_prime_UTR 50.0%
!! GTAGTTAGCTCTGCCAAGTG+TGG + chr3_4:79026884-79026903 Msa0525490:three_prime_UTR 50.0%
GAAGATGATGCTATCGCTGC+TGG + chr3_4:79026908-79026927 Msa0525490:three_prime_UTR 50.0%
CTTGCTAAGGGCAGTTGAAG+AGG - chr3_4:79026940-79026959 None:intergenic 50.0%
CTCTTCAACTGCCCTTAGCA+AGG + chr3_4:79026938-79026957 Msa0525490:three_prime_UTR 50.0%
TTGGTGAGGTTAGTGAGCGG+AGG - chr3_4:79021385-79021404 None:intergenic 55.0%
GTAGGAGCAACCAATGGAGG+AGG - chr3_4:79021753-79021772 None:intergenic 55.0%
ACTCTTCAGCCACCTGCAGT+TGG - chr3_4:79022996-79023015 None:intergenic 55.0%
GGAGATTTGTGCACCTCAGG+TGG + chr3_4:79023235-79023254 Msa0525490:CDS 55.0%
GATTTGTGCACCTCAGGTGG+AGG + chr3_4:79023238-79023257 Msa0525490:CDS 55.0%
! CTGCACCATTAGTGGATGGC+TGG + chr3_4:79024504-79024523 Msa0525490:three_prime_UTR 55.0%
ACCGTGAGGTTGGATGGTTC+AGG - chr3_4:79025133-79025152 None:intergenic 55.0%
TCCTCAACCCGGTTCCATTC+GGG + chr3_4:79025302-79025321 Msa0525490:three_prime_UTR 55.0%
TGATCCACCCGAATGGAACC+GGG - chr3_4:79025312-79025331 None:intergenic 55.0%
ACTTCCCGGGTCATGACGAT+CGG + chr3_4:79025351-79025370 Msa0525490:three_prime_UTR 55.0%
TGCATCCGATCGTCATGACC+CGG - chr3_4:79025359-79025378 None:intergenic 55.0%
ACTGGTCCCCTGATGGAGAA+TGG - chr3_4:79025390-79025409 None:intergenic 55.0%
ATGTGCAACTGGTCCCCTGA+TGG - chr3_4:79025397-79025416 None:intergenic 55.0%
CACCATCGCCAGACGGAAAA+TGG - chr3_4:79025531-79025550 None:intergenic 55.0%
TTTCCGTCTGGCGATGGTGA+CGG + chr3_4:79025532-79025551 Msa0525490:three_prime_UTR 55.0%
TTTCCGTCACCATCGCCAGA+CGG - chr3_4:79025538-79025557 None:intergenic 55.0%
TTTCTCAACCGCATGGGACC+GGG - chr3_4:79025692-79025711 None:intergenic 55.0%
CTTTCTCAACCGCATGGGAC+CGG - chr3_4:79025693-79025712 None:intergenic 55.0%
GTCGGGTATCACAAGTGCAG+AGG - chr3_4:79025913-79025932 None:intergenic 55.0%
! CGGGTTGAGATGGTGAGCAT+TGG + chr3_4:79025957-79025976 Msa0525490:three_prime_UTR 55.0%
! ATGTGACGGAAGCTAGAGCC+AGG + chr3_4:79026036-79026055 Msa0525490:three_prime_UTR 55.0%
GTAAACGCGTGTAAACCCGG+TGG + chr3_4:79026111-79026130 Msa0525490:three_prime_UTR 55.0%
TCACTCACGACGGAACTCAC+CGG - chr3_4:79026287-79026306 None:intergenic 55.0%
ACTGCAGTCGCTTCCTATGG+TGG - chr3_4:79026363-79026382 None:intergenic 55.0%
TGGACTGCAGTCGCTTCCTA+TGG - chr3_4:79026366-79026385 None:intergenic 55.0%
TTCCGGTAGGAGATACAGCG+GGG + chr3_4:79026388-79026407 Msa0525490:three_prime_UTR 55.0%
CTGAAATCAGCGACGCCGTA+GGG + chr3_4:79026411-79026430 Msa0525490:three_prime_UTR 55.0%
ACCCGAAGACTCACTCCCTA+CGG - chr3_4:79026429-79026448 None:intergenic 55.0%
GTTGCAGAGGAGGTGGATCT+TGG + chr3_4:79026745-79026764 Msa0525490:three_prime_UTR 55.0%
GGTGAGGGTGATGAATTGGG+AGG + chr3_4:79026844-79026863 Msa0525490:three_prime_UTR 55.0%
! GTTGCTGTTGCTGTTGCTGC+TGG - chr3_4:79026970-79026989 None:intergenic 55.0%
AGGTCGCTTCTTGGCAGAGG+CGG - chr3_4:79021365-79021384 None:intergenic 60.0%
AGTGAGCGGAGGTCGCTTCT+TGG - chr3_4:79021374-79021393 None:intergenic 60.0%
GGAGCAACCAATGGAGGAGG+AGG - chr3_4:79021750-79021769 None:intergenic 60.0%
ACCCGAATGGAACCGGGTTG+AGG - chr3_4:79025306-79025325 None:intergenic 60.0%
TCAACCCGGTTCCATTCGGG+TGG + chr3_4:79025305-79025324 Msa0525490:three_prime_UTR 60.0%
GATCGTCATGACCCGGGAAG+TGG - chr3_4:79025352-79025371 None:intergenic 60.0%
GCATCCGATCGTCATGACCC+GGG - chr3_4:79025358-79025377 None:intergenic 60.0%
!! GTCTGGCGATGGTGACGGAA+AGG + chr3_4:79025537-79025556 Msa0525490:three_prime_UTR 60.0%
!! CCGGTTCACCGGTTCGTTTC+CGG - chr3_4:79025818-79025837 None:intergenic 60.0%
CCGGAAACGAACCGGTGAAC+CGG + chr3_4:79025815-79025834 Msa0525490:three_prime_UTR 60.0%
TACCCGACCCGCGTTGAATC+AGG + chr3_4:79025925-79025944 Msa0525490:three_prime_UTR 60.0%
TCGCCTGATTCAACGCGGGT+CGG - chr3_4:79025931-79025950 None:intergenic 60.0%
GCCAGGTCTTCTCGTTGCGA+CGG + chr3_4:79026053-79026072 Msa0525490:three_prime_UTR 60.0%
ATCGGAGAGGGAACGACGGT+TGG - chr3_4:79026203-79026222 None:intergenic 60.0%
GTGCGATCGTCCACCCAACT+TGG + chr3_4:79026234-79026253 Msa0525490:three_prime_UTR 60.0%
GGTGAGTTCCGTCGTGAGTG+AGG + chr3_4:79026286-79026305 Msa0525490:three_prime_UTR 60.0%
! AGGTTGGTCCGGCGAAGTAG+AGG - chr3_4:79026337-79026356 None:intergenic 60.0%
AGCCCCGCTGTATCTCCTAC+CGG - chr3_4:79026393-79026412 None:intergenic 60.0%
GCTGAAATCAGCGACGCCGT+AGG + chr3_4:79026410-79026429 Msa0525490:three_prime_UTR 60.0%
CGCCGTAGGGAGTGAGTCTT+CGG + chr3_4:79026424-79026443 Msa0525490:three_prime_UTR 60.0%
GCCGTAGGGAGTGAGTCTTC+GGG + chr3_4:79026425-79026444 Msa0525490:three_prime_UTR 60.0%
CCAGCTGACACGTGGTACAC+CGG + chr3_4:79026485-79026504 Msa0525490:three_prime_UTR 60.0%
CAGCTGACACGTGGTACACC+GGG + chr3_4:79026486-79026505 Msa0525490:three_prime_UTR 60.0%
GTGTCAACGCACGAGGATCC+CGG - chr3_4:79026507-79026526 None:intergenic 60.0%
TCACCGTCGCTGGTGACACT+TGG + chr3_4:79026540-79026559 Msa0525490:three_prime_UTR 60.0%
GCTGGCGTTGCCCTTGCTAA+GGG - chr3_4:79026952-79026971 None:intergenic 60.0%
TGCTGGCGTTGCCCTTGCTA+AGG - chr3_4:79026953-79026972 None:intergenic 60.0%
CGGAGGTCGCTTCTTGGCAG+AGG - chr3_4:79021368-79021387 None:intergenic 65.0%
AGGTCGAACCCGGTCCCATG+CGG + chr3_4:79025681-79025700 Msa0525490:three_prime_UTR 65.0%
CGCCTGATTCAACGCGGGTC+GGG - chr3_4:79025930-79025949 None:intergenic 65.0%
GCCGTCGCAACGAGAAGACC+TGG - chr3_4:79026057-79026076 None:intergenic 65.0%
! GCACGGTGGCTGGCCAAGTT+GGG - chr3_4:79026250-79026269 None:intergenic 65.0%
! AGCACGGTGGCTGGCCAAGT+TGG - chr3_4:79026251-79026270 None:intergenic 65.0%
ACGGCAGTCCAGCTGACACG+TGG + chr3_4:79026477-79026496 Msa0525490:three_prime_UTR 65.0%
CCGGTGTACCACGTGTCAGC+TGG - chr3_4:79026488-79026507 None:intergenic 65.0%
GCATGGGACCGGGTTCGACC+TGG - chr3_4:79025682-79025701 None:intergenic 70.0%
! CGGTGGCTGGCCAAGTTGGG+TGG - chr3_4:79026247-79026266 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 79021017 79027211 79021017 ID=Msa0525490;Name=Msa0525490
chr3_4 mRNA 79021017 79027211 79021017 ID=Msa0525490-mRNA-1;Parent=Msa0525490;Name=Msa0525490-mRNA-1;_AED=0.18;_eAED=0.18;_QI=227|1|1|1|1|1|10|2859|502
chr3_4 exon 79021017 79021438 79021017 ID=Msa0525490-mRNA-1:exon:23612;Parent=Msa0525490-mRNA-1
chr3_4 exon 79021573 79021987 79021573 ID=Msa0525490-mRNA-1:exon:23613;Parent=Msa0525490-mRNA-1
chr3_4 exon 79022103 79022239 79022103 ID=Msa0525490-mRNA-1:exon:23614;Parent=Msa0525490-mRNA-1
chr3_4 exon 79022726 79022818 79022726 ID=Msa0525490-mRNA-1:exon:23615;Parent=Msa0525490-mRNA-1
chr3_4 exon 79023003 79023136 79023003 ID=Msa0525490-mRNA-1:exon:23616;Parent=Msa0525490-mRNA-1
chr3_4 exon 79023226 79023301 79023226 ID=Msa0525490-mRNA-1:exon:23617;Parent=Msa0525490-mRNA-1
chr3_4 exon 79023386 79023496 79023386 ID=Msa0525490-mRNA-1:exon:23618;Parent=Msa0525490-mRNA-1
chr3_4 exon 79023823 79023972 79023823 ID=Msa0525490-mRNA-1:exon:23619;Parent=Msa0525490-mRNA-1
chr3_4 exon 79024074 79024208 79024074 ID=Msa0525490-mRNA-1:exon:23620;Parent=Msa0525490-mRNA-1
chr3_4 exon 79024290 79027211 79024290 ID=Msa0525490-mRNA-1:exon:23621;Parent=Msa0525490-mRNA-1
chr3_4 five_prime_UTR 79021017 79021243 79021017 ID=Msa0525490-mRNA-1:five_prime_utr;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79021244 79021438 79021244 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79021573 79021987 79021573 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79022103 79022239 79022103 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79022726 79022818 79022726 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79023003 79023136 79023003 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79023226 79023301 79023226 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79023386 79023496 79023386 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79023823 79023972 79023823 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79024074 79024208 79024074 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 CDS 79024290 79024352 79024290 ID=Msa0525490-mRNA-1:cds;Parent=Msa0525490-mRNA-1
chr3_4 three_prime_UTR 79024353 79027211 79024353 ID=Msa0525490-mRNA-1:three_prime_utr;Parent=Msa0525490-mRNA-1
Gene Sequence

>Msa0525490

ATGTCAAATCATAATAATCGTCGTTCATCGTTTTCTTCTTCAACAACGTCGTCAATGGCAAAACGACACCCACCTGTTACCGCTTTAACATCAGAGAACAACGCCGGAAAAGTCTTAGCCGCCTCTGCCAAGAAGCGACCTCCGCTCACTAACCTCACCAATCAAAATTCTTCCCGCAACAATTCATCCACTTTGGTAACTAAAGTTGCAAAGACAAAGAAAGAACCTTCACCATGCAATTCTTCTTCAAGCTCTGTGATTTCTGTTAACAAAAAACCTACTTTGTCGAATGTTAAATCCGCTACTGTGAATGTTTTTCCCAAGGCCATTACTACTACTTCATCATTTTCTGGAAGGAATGAAGTTGTTCCTCCTCCTCCATTGGTTGCTCCTACTACCTTCAATGTTCCGGTTTCGAGTAGTATGGATTTATCATCTCCTGGTAAATCCGATGGAATGTCGGTTTCTATGGACGAGACAATGTCGTCGTGTGATTCTTTCAAGAGTCCTGATATTGAATATGTGGATAACAGTGATGTTCCAGCTGTTGATTCTATTGAGAGGAAGACTTTTTGTAGCCTCAACATTTCTGATTCTAATTACCCATCAGGTAACATTTGTAGTAGAGACATTCTTGTTGAGTTGGAAAAGGGAGAGAAAATTGTTAATATTGATAATGATTACATGGATCCTCAACTCTGTGCTACCTTTGCCTGTGATATCTACAAGCATCTACGTGCATCTGAGACAAAGAAAAGGCCTTCAACAGACTTCATGGAGAAAATTCAGAAGGACATTAATCCCAGCATGCGTGCTATATTGATTGATTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCCGATACATTGTATTTGACAGTAAACTACATCGATCGATATCTTTCTGGGAATCCGATGAACAGGCAGCAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACATACTTCAAGGATGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTCTGAAATTTGAAATGACTGCCCCAACAATTAAATGCTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAATTGATGAGGTCCCTTCACTACAACTAGAGTGCTTGACAAATTTTATCGCCGAATTATCTCTGTTGGAGTATAGTATGCTTTGTTATGCTCCATCACTTATAGCAGCTTCTTCAATTTTCCTGGCCAAATATATGCTTTTCCCTGCAATGAAACCATGGAATCCGACATTGCAGCATTACACTCAATACCAGCCTTCTGATTTGTATGCTTGTGTAAAGGATCTCCACCGTCTTTGTTGCAACAGTCCTAATTCTAATTTGCCTGCAATTAAGGAGAAATACAATCAGCACAAGTATAAATATGTTGCCAAGAAGTACTGCCCTCCTTCAATACCTCAAGAATTTTTCCAGAACTGA
Protein sequence

>Msa0525490

MSNHNNRRSSFSSSTTSSMAKRHPPVTALTSENNAGKVLAASAKKRPPLTNLTNQNSSRNNSSTLVTKVAKTKKEPSPCNSSSSSVISVNKKPTLSNVKSATVNVFPKAITTTSSFSGRNEVVPPPPLVAPTTFNVPVSSSMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLYACVKDLHRLCCNSPNSNLPAIKEKYNQHKYKYVAKKYCPPSIPQEFFQN*