AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0470480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470480 MtrunA17_Chr3g0125051 98.024 506 5 2 1 502 1 505 0.0 1009
Msa0470480 MtrunA17_Chr3g0125041 52.245 490 213 8 30 502 25 510 7.93e-161 466
Msa0470480 MtrunA17_Chr3g0138431 55.000 280 124 1 222 501 198 475 4.97e-106 325
Msa0470480 MtrunA17_Chr1g0152871 53.597 278 124 3 228 501 82 358 1.91e-104 317
Msa0470480 MtrunA17_Chr2g0332171 51.171 299 139 3 204 499 191 485 5.33e-99 306
Msa0470480 MtrunA17_Chr1g0148681 51.852 270 130 0 218 487 137 406 6.71e-98 301
Msa0470480 MtrunA17_Chr2g0332181 51.211 289 140 1 212 500 142 429 3.75e-97 300
Msa0470480 MtrunA17_Chr3g0134401 45.620 274 149 0 228 501 65 338 1.01e-81 257
Msa0470480 MtrunA17_Chr3g0134421 44.484 281 152 2 222 500 71 349 6.23e-79 250
Msa0470480 MtrunA17_Chr3g0134441 50.575 261 127 1 242 500 69 329 6.56e-78 247
Msa0470480 MtrunA17_Chr3g0134411 45.318 267 144 1 237 501 91 357 1.97e-75 242
Msa0470480 MtrunA17_Chr3g0134431 43.852 244 114 3 241 482 13 235 1.63e-61 202
Msa0470480 MtrunA17_Chr5g0441371 43.295 261 137 7 221 478 148 400 5.07e-61 206
Msa0470480 MtrunA17_Chr7g0255771 39.362 282 160 8 217 494 178 452 5.10e-58 199
Msa0470480 MtrunA17_Chr5g0406741 38.194 288 160 8 213 494 145 420 1.08e-57 197
Msa0470480 MtrunA17_Chr8g0370671 36.140 285 170 6 213 494 149 424 3.62e-54 188
Msa0470480 MtrunA17_Chr8g0357001 36.842 228 131 5 241 463 490 709 1.00e-43 164
Msa0470480 MtrunA17_Chr3g0102861 29.392 296 181 9 212 501 3 276 4.69e-30 118
Msa0470480 MtrunA17_Chr3g0102621 30.894 246 154 6 240 479 31 266 1.42e-29 117
Msa0470480 MtrunA17_Chr3g0103471 30.769 260 161 7 240 490 25 274 1.39e-28 114
Msa0470480 MtrunA17_Chr3g0102851 32.883 222 133 6 240 455 35 246 1.23e-27 112
Msa0470480 MtrunA17_Chr3g0102631 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0470480 MtrunA17_Chr3g0102651 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0470480 MtrunA17_Chr3g0102661 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0470480 MtrunA17_Chr3g0102671 33.182 220 130 7 288 501 1 209 7.97e-24 99.4
Msa0470480 MtrunA17_Chr5g0418901 41.772 79 46 0 292 370 7 85 2.45e-18 80.1
Msa0470480 MtrunA17_Chr1g0161581 33.898 177 96 6 255 430 362 518 3.37e-17 84.3
Msa0470480 MtrunA17_Chr6g0462911 30.000 230 136 7 266 487 70 282 4.00e-17 82.4
Msa0470480 MtrunA17_Chr6g0462981 30.870 230 136 9 266 487 70 284 5.69e-15 75.9
Msa0470480 MtrunA17_Chr5g0398791 28.571 147 104 1 263 409 27 172 6.68e-15 72.8
Msa0470480 MtrunA17_Chr8g0364521 34.815 135 83 3 249 378 71 205 7.74e-13 69.7
Msa0470480 MtrunA17_Chr5g0412471 29.293 198 128 6 222 408 41 237 3.92e-12 67.8
Msa0470480 MtrunA17_Chr4g0041721 28.194 227 143 12 249 463 69 287 3.73e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0470480 AT1G44110.1 60.040 503 145 7 6 502 7 459 0.0 566
Msa0470480 AT1G77390.1 67.260 281 92 0 220 500 161 441 1.29e-144 422
Msa0470480 AT5G25380.3 54.286 280 128 0 220 499 156 435 1.89e-107 327
Msa0470480 AT5G25380.1 54.286 280 128 0 220 499 156 435 1.89e-107 327
Msa0470480 AT5G25380.4 54.286 280 128 0 220 499 162 441 3.83e-107 327
Msa0470480 AT5G11300.1 53.571 280 130 0 220 499 155 434 2.49e-105 322
Msa0470480 AT5G25380.2 55.894 263 116 0 220 482 156 418 7.25e-105 320
Msa0470480 AT1G80370.1 54.448 281 127 1 220 500 180 459 2.47e-103 317
Msa0470480 AT1G15570.1 55.970 268 118 0 220 487 171 438 4.87e-103 316
Msa0470480 AT1G47230.1 48.318 327 160 2 178 502 43 362 1.96e-102 312
Msa0470480 AT1G47230.2 48.171 328 160 3 178 502 43 363 1.33e-100 307
Msa0470480 AT1G47210.2 49.291 282 141 1 223 502 88 369 4.89e-99 303
Msa0470480 AT5G43080.1 50.000 280 140 0 223 502 73 352 1.84e-98 301
Msa0470480 AT5G43080.2 48.929 280 138 1 223 502 73 347 1.55e-95 293
Msa0470480 AT1G47220.1 48.936 282 142 1 223 502 42 323 1.05e-90 280
Msa0470480 AT5G11300.2 56.422 218 95 0 220 437 155 372 1.10e-85 270
Msa0470480 AT5G06150.1 39.483 271 151 6 220 487 164 424 1.48e-53 187
Msa0470480 AT4G37490.1 36.332 289 167 8 213 494 140 418 4.24e-53 185
Msa0470480 AT3G11520.1 40.075 267 149 7 224 487 143 401 1.76e-52 183
Msa0470480 AT1G76310.1 31.368 424 248 16 83 488 24 422 5.75e-52 182
Msa0470480 AT1G20610.1 35.738 305 177 5 197 488 123 421 1.16e-51 181
Msa0470480 AT2G26760.1 39.326 267 149 8 218 479 108 366 3.69e-51 179
Msa0470480 AT2G17620.1 37.847 288 167 5 202 488 139 415 3.73e-49 175
Msa0470480 AT3G11520.2 42.241 232 123 7 224 452 143 366 1.19e-48 172
Msa0470480 AT4G35620.1 37.269 271 162 4 221 490 155 418 8.96e-48 171
Msa0470480 AT1G16330.1 33.019 318 194 7 162 478 330 629 4.17e-46 171
Msa0470480 AT1G76310.3 29.425 452 248 17 83 488 24 450 4.94e-46 167
Msa0470480 AT1G76310.2 31.959 388 221 16 83 452 24 386 9.98e-46 164
Msa0470480 AT4G35620.2 38.627 233 135 4 221 452 155 380 4.68e-40 149
Msa0470480 AT5G06150.2 43.529 170 93 3 220 388 164 331 7.30e-38 142
Msa0470480 AT1G47210.1 56.190 105 44 1 223 325 88 192 3.53e-36 133
Msa0470480 AT1G76310.4 41.011 178 100 4 208 383 149 323 4.05e-34 132
Msa0470480 AT1G20590.1 39.130 161 92 2 299 459 66 220 1.46e-30 120
Msa0470480 AT1G34460.9 33.908 174 92 4 220 392 240 391 2.41e-19 91.3
Msa0470480 AT1G34460.5 33.908 174 92 4 220 392 254 405 2.53e-19 91.3
Msa0470480 AT1G34460.6 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0470480 AT1G34460.3 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0470480 AT1G34460.8 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0470480 AT1G34460.1 33.908 174 92 4 220 392 254 405 2.59e-19 91.3
Msa0470480 AT1G34460.2 33.908 174 92 4 220 392 251 402 2.71e-19 90.9
Msa0470480 AT1G34460.4 33.908 174 92 4 220 392 251 402 2.71e-19 90.9
Msa0470480 AT1G34460.7 33.908 174 92 4 220 392 254 405 2.80e-19 90.9
Msa0470480 AT1G14750.1 30.151 199 128 5 268 462 384 575 5.41e-16 81.3
Msa0470480 AT1G14750.2 30.151 199 128 5 268 462 216 407 1.50e-15 79.0
Msa0470480 AT1G14750.3 29.897 194 125 5 268 457 384 570 2.45e-15 79.3
Msa0470480 AT1G14750.4 30.151 199 127 6 268 462 216 406 2.49e-14 75.5

Find 358 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCACAGGCTTGATATATT+TGG 0.102269 3_3:+72563207 Msa0470480:three_prime_UTR
ACATCTACCTAGCAATTATT+TGG 0.119593 3_3:-72562719 None:intergenic
TAGCTACCTGAATTAGTATT+AGG 0.151275 3_3:-72565326 None:intergenic
CCGGTTCACCGGTTCGTTTC+CGG 0.177860 3_3:-72563968 None:intergenic
TTCTAATTTGCCTGCAATTA+AGG 0.195048 3_3:+72562320 Msa0470480:CDS
CTCAAGTGCTGATCTTCTTT+TGG 0.208253 3_3:+72564809 Msa0470480:three_prime_UTR
CACCATCGCCAGACGGAAAA+TGG 0.208864 3_3:-72563681 None:intergenic
ATTGCAGGCAAATTAGAATT+AGG 0.217866 3_3:-72562315 None:intergenic
GGGAAAAGATGTTTAGAAAT+TGG 0.230231 3_3:-72562698 None:intergenic
TACATCGATCGATATCTTTC+TGG 0.240590 3_3:+72561208 Msa0470480:CDS
CTGTATCTCCTACCGGAAAA+TGG 0.260326 3_3:-72564536 None:intergenic
TGCAGGGAAAAGCATATATT+TGG 0.260467 3_3:-72562092 None:intergenic
CGATGGAATGTCGGTTTCTA+TGG 0.268944 3_3:+72559981 Msa0470480:CDS
TTTCCATCGGGGCTAAAATA+TGG 0.281247 3_3:+72563394 Msa0470480:three_prime_UTR
ATCTCAAAGCTTCCACTTCC+CGG 0.305361 3_3:+72563490 Msa0470480:three_prime_UTR
CTCAAGAAGCATTTAATTGT+TGG 0.310601 3_3:-72561594 None:intergenic
TCTTGGTGAGGGTGATGAAT+TGG 0.314863 3_3:+72564993 Msa0470480:three_prime_UTR
AACGCTTTCCAACTGGGAAT+TGG 0.316927 3_3:-72562534 None:intergenic
TTCACAGGCTTGATATATTT+GGG 0.319302 3_3:+72563208 Msa0470480:three_prime_UTR
TCAACTTCTTGACGAAATTT+CGG 0.322692 3_3:+72563734 Msa0470480:three_prime_UTR
TGCTTCTTCTGCACCATTAG+TGG 0.328106 3_3:+72562649 Msa0470480:three_prime_UTR
GTTTATTGTTAATGTGGATT+TGG 0.328157 3_3:-72563002 None:intergenic
TTGTATTTCTCCTTAATTGC+AGG 0.329888 3_3:-72562330 None:intergenic
TGAAGGAGGGCAGTACTTCT+TGG 0.332711 3_3:-72562456 None:intergenic
CGCCGTAGGGAGTGAGTCTT+CGG 0.333993 3_3:+72564577 Msa0470480:three_prime_UTR
TGCTGGCGTTGCCCTTGCTA+AGG 0.338081 3_3:-72565103 None:intergenic
TCGATCTAACGCTTTCCAAC+TGG 0.347874 3_3:-72562541 None:intergenic
TTCCTCAACCCGGTTCCATT+CGG 0.347978 3_3:+72563454 Msa0470480:three_prime_UTR
CATCTACCTAGCAATTATTT+GGG 0.348054 3_3:-72562718 None:intergenic
GCGATGAATTTGTTGTTTCC+AGG 0.349537 3_3:+72564228 Msa0470480:three_prime_UTR
AGCTACCTGAATTAGTATTA+GGG 0.349917 3_3:-72565325 None:intergenic
GTAAACGGCGTCGTAGTATA+TGG 0.353843 3_3:+72564842 Msa0470480:three_prime_UTR
TCCCACTACCTTCAATGTTC+CGG 0.356703 3_3:+72559921 Msa0470480:CDS
TGTTCCGGTTTCGAGTAGTA+TGG 0.365772 3_3:+72559936 Msa0470480:CDS
CCGCATCATTATCAACCTTA+TGG 0.372423 3_3:-72563316 None:intergenic
TTCCTAATCTGACTCTCTTC+CGG 0.372456 3_3:-72563987 None:intergenic
CATACCCATGGTTTCATTGC+AGG 0.373400 3_3:-72562109 None:intergenic
TTGATCCACCCGAATGGAAC+CGG 0.378646 3_3:-72563463 None:intergenic
CTTGGTGAGGGTGATGAATT+GGG 0.379668 3_3:+72564994 Msa0470480:three_prime_UTR
TCCTCAACCCGGTTCCATTC+GGG 0.380283 3_3:+72563455 Msa0470480:three_prime_UTR
TGAGTAATGGATGTGAGATT+TGG 0.383463 3_3:+72564921 Msa0470480:three_prime_UTR
CTTTCTCAACCGCATGGGAC+CGG 0.387357 3_3:-72563843 None:intergenic
TAATGTATAGTAAATAATTA+AGG 0.387366 3_3:-72563051 None:intergenic
TTATCCACATATTCAATATC+AGG 0.391534 3_3:-72560039 None:intergenic
AAGGCCTTCAACAGACTTCA+TGG 0.391707 3_3:+72560888 Msa0470480:CDS
ATCAACTCTCTGCTCAGTTC+TGG 0.392573 3_3:-72562496 None:intergenic
TTGTTTCCAGGTGAAGTTGC+CGG 0.392945 3_3:+72564240 Msa0470480:three_prime_UTR
TACCCGACCCGCGTTGAATC+AGG 0.394302 3_3:+72564078 Msa0470480:three_prime_UTR
TGCACAATGTGGTCTGTAAA+TGG 0.394631 3_3:-72563092 None:intergenic
TTTCAAACCTTGAGAAGGTT+AGG 0.398216 3_3:-72562839 None:intergenic
AAACTGATTCAAAGTGGTTC+AGG 0.400842 3_3:-72563433 None:intergenic
AGCACGGTGGCTGGCCAAGT+TGG 0.401342 3_3:-72564401 None:intergenic
CCGGAAACGAACCGGTGAAC+CGG 0.402597 3_3:+72563968 Msa0470480:three_prime_UTR
TTCTCCATGAAGTCTGTTGA+AGG 0.403745 3_3:-72560892 None:intergenic
CATTCTTGTTGAGTTGGAAA+AGG 0.405665 3_3:+72560276 Msa0470480:CDS
CGTCAGTGAGTTGTAATTCT+TGG 0.407418 3_3:+72564976 Msa0470480:three_prime_UTR
TCTGATGTTAAAGCGGTAAC+AGG 0.410705 3_3:-72559469 None:intergenic
TCATAAGAATCTTTACATAA+TGG 0.414825 3_3:-72563632 None:intergenic
TCTGATTCTAATTACCCATC+AGG 0.416400 3_3:+72560120 Msa0470480:CDS
AGTGAGCGGAGGTCGCTTCT+TGG 0.416428 3_3:-72559524 None:intergenic
TTGAATCAGGCGAGATAAAC+GGG 0.418237 3_3:+72564091 Msa0470480:three_prime_UTR
AGGCAGCAATTACAATTACT+TGG 0.421832 3_3:+72561244 Msa0470480:CDS
ATGCATAGCGCTGTTGCTGC+TGG 0.423254 3_3:-72565120 None:intergenic
GTTGAATCAGGCGAGATAAA+CGG 0.424517 3_3:+72564090 Msa0470480:three_prime_UTR
AACTGATAACACATACTTCA+AGG 0.426864 3_3:+72561428 Msa0470480:CDS
TTTGGTGGTGGTTGTGTAAA+CGG 0.426909 3_3:+72564827 Msa0470480:three_prime_UTR
CCTGTACTAACAATGTAGTT+TGG 0.430014 3_3:+72563121 Msa0470480:three_prime_UTR
CTATTCCACCCATCTCAAAT+CGG 0.431303 3_3:-72564607 None:intergenic
AGTTGTTCCTCCTCCTCCAT+TGG 0.434223 3_3:+72559894 Msa0470480:CDS
ACTCATAATTCTTATGAAGA+TGG 0.434923 3_3:-72563247 None:intergenic
CTGGTGTTTACGTAGTGAAC+CGG 0.435407 3_3:-72563903 None:intergenic
CAAAGTGGATGAATTGTTGC+GGG 0.435643 3_3:-72559569 None:intergenic
ATACTCCAACAGAGATAATT+CGG 0.437270 3_3:-72562017 None:intergenic
CAATCCTCAAATGAACAATA+AGG 0.437311 3_3:+72563163 Msa0470480:three_prime_UTR
TTTACACCGGCAACTTCACC+TGG 0.437505 3_3:-72564246 None:intergenic
TTCTTCAACAACGTCGTCAA+TGG 0.439569 3_3:+72559432 Msa0470480:CDS
AAAGCGATCCATTCTCCATC+AGG 0.440483 3_3:+72563532 Msa0470480:three_prime_UTR
GCACGGTGGCTGGCCAAGTT+GGG 0.445351 3_3:-72564400 None:intergenic
GCTGGCGTTGCCCTTGCTAA+GGG 0.445478 3_3:-72565102 None:intergenic
GTAGTATATGGTTGGAAAAC+CGG 0.446501 3_3:+72564854 Msa0470480:three_prime_UTR
ACCGTGAGGTTGGATGGTTC+AGG 0.446696 3_3:-72563283 None:intergenic
GAAGATGATGCTATCGCTGC+TGG 0.447584 3_3:+72565061 Msa0470480:three_prime_UTR
GATCGTCATGACCCGGGAAG+TGG 0.448872 3_3:-72563502 None:intergenic
AGGCATTGTTCTTTCCGTCC+AGG 0.448948 3_3:+72563710 Msa0470480:three_prime_UTR
TAGAGACATTCTTGTTGAGT+TGG 0.451678 3_3:+72560270 Msa0470480:CDS
ACACGCCCTAATACTAATTC+AGG 0.453502 3_3:+72565320 Msa0470480:three_prime_UTR
CTCAGTGCTTTCTGAAGCAA+AGG 0.453965 3_3:+72563783 Msa0470480:three_prime_UTR
TCTAGCCAGCCATCCACTAA+TGG 0.455588 3_3:-72562662 None:intergenic
TCTCCAGAGGGTGAGAAAAC+CGG 0.455763 3_3:+72563949 Msa0470480:three_prime_UTR
GGGTGTTACCCGATTTGAGA+TGG 0.457240 3_3:+72564598 Msa0470480:three_prime_UTR
TGTGTTTCTGTGAGGTGATT+AGG 0.457467 3_3:+72564741 Msa0470480:three_prime_UTR
AACACAAGACTCTTTCCATC+GGG 0.458022 3_3:+72563382 Msa0470480:three_prime_UTR
CCGCAACAATTCATCCACTT+TGG 0.458460 3_3:+72559570 Msa0470480:CDS
ACCCGAATGGAACCGGGTTG+AGG 0.461448 3_3:-72563456 None:intergenic
ATATATTTGGGTGACCAAGC+AGG 0.462087 3_3:+72563220 Msa0470480:three_prime_UTR
TAATGATGCGGGTTAGAGAT+AGG 0.463618 3_3:+72563328 Msa0470480:three_prime_UTR
ACGGTGAATATTTCACCATA+AGG 0.464654 3_3:+72563301 Msa0470480:three_prime_UTR
TATCGCCGAATTATCTCTGT+TGG 0.464887 3_3:+72562012 Msa0470480:CDS
TGAGGAGATTTGTGCACCTC+AGG 0.464961 3_3:+72561386 Msa0470480:CDS
TACATAATGGATGCCGTTCA+CGG 0.466213 3_3:-72563619 None:intergenic
AAGAGAGTCAGATTAGGAAC+GGG 0.466921 3_3:+72563991 Msa0470480:three_prime_UTR
TGGACCTTATTGTTCATTTG+AGG 0.466996 3_3:-72563167 None:intergenic
AATCAATATAGCACGCATGC+TGG 0.468536 3_3:-72560935 None:intergenic
TTTCTGGGAATCCGATGAAC+AGG 0.469283 3_3:+72561224 Msa0470480:CDS
CCTGGTTAGCAATGAATTCA+AGG 0.469660 3_3:-72564154 None:intergenic
CTGCACCATTAGTGGATGGC+TGG 0.470191 3_3:+72562657 Msa0470480:three_prime_UTR
TTGAGAGTTTATTGTTAATG+TGG 0.470225 3_3:-72563008 None:intergenic
GTTGCAGAGGAGGTGGATCT+TGG 0.470863 3_3:+72564898 Msa0470480:three_prime_UTR
TGAAGTAGTAGTAATGGCCT+TGG 0.476179 3_3:-72559851 None:intergenic
TGCGTGCTATATTGATTGAT+TGG 0.477631 3_3:+72560941 Msa0470480:CDS
ACATCGATCGATATCTTTCT+GGG 0.477841 3_3:+72561209 Msa0470480:CDS
CCGGTGTACCACGTGTCAGC+TGG 0.479911 3_3:-72564638 None:intergenic
ATTCTTGTTGAGTTGGAAAA+GGG 0.479932 3_3:+72560277 Msa0470480:CDS
AAATAGTTGAGCACGGTGGC+TGG 0.481128 3_3:-72564410 None:intergenic
GATTTAACATTCGACAAAGT+AGG 0.483352 3_3:-72559808 None:intergenic
TAATATTGATAATGATTACA+TGG 0.483673 3_3:+72560312 Msa0470480:CDS
TTTCTCAACCGCATGGGACC+GGG 0.485033 3_3:-72563842 None:intergenic
TACTGTCAAATACAATGTAT+CGG 0.485089 3_3:-72561182 None:intergenic
ATCGGAGAGGGAACGACGGT+TGG 0.487237 3_3:-72564353 None:intergenic
ATCGCACTATTTACTTTCAT+CGG 0.488789 3_3:-72564371 None:intergenic
ATGTGAGATTTGGAAGGAAT+TGG 0.490581 3_3:+72564931 Msa0470480:three_prime_UTR
CCAAACTACATTGTTAGTAC+AGG 0.491243 3_3:-72563121 None:intergenic
GGGTTGAGATGGTGAGCATT+GGG 0.494084 3_3:+72564111 Msa0470480:three_prime_UTR
CGCCTGATTCAACGCGGGTC+GGG 0.494143 3_3:-72564080 None:intergenic
AAATCCATACTACTCGAAAC+CGG 0.496469 3_3:-72559940 None:intergenic
GGTCGGATACAATGTGCAAC+TGG 0.496813 3_3:-72563558 None:intergenic
AGCATCATCTTCACCACACT+TGG 0.498572 3_3:-72565050 None:intergenic
GGCATTGTTCTTTCCGTCCA+GGG 0.501696 3_3:+72563711 Msa0470480:three_prime_UTR
CGATCTAACGCTTTCCAACT+GGG 0.502736 3_3:-72562540 None:intergenic
CGGGTTGAGATGGTGAGCAT+TGG 0.503026 3_3:+72564110 Msa0470480:three_prime_UTR
ACTCGAAACCGGAACATTGA+AGG 0.503350 3_3:-72559929 None:intergenic
TGTATAGTAAATAATTAAGG+TGG 0.503749 3_3:-72563048 None:intergenic
TGGAATCTCAGACAAAGAAA+AGG 0.505760 3_3:+72560869 Msa0470480:intron
GTGCGATCGTCCACCCAACT+TGG 0.507384 3_3:+72564387 Msa0470480:three_prime_UTR
GAGTCCTGATATTGAATATG+TGG 0.508164 3_3:+72560035 Msa0470480:CDS
CACTTCAACTGCCCTTAGCA+AGG 0.509340 3_3:+72565091 Msa0470480:three_prime_UTR
AACCGGAACATTGAAGGTAG+TGG 0.509374 3_3:-72559923 None:intergenic
CTGACTCTCTTCCGGTTCAC+CGG 0.509636 3_3:-72563979 None:intergenic
CTGAAATCAGCGACGCCGTA+GGG 0.511315 3_3:+72564564 Msa0470480:three_prime_UTR
TGATTTGTATGCTTGTGTAA+AGG 0.511367 3_3:+72562266 Msa0470480:CDS
GGTGTTACCCGATTTGAGAT+GGG 0.512021 3_3:+72564599 Msa0470480:three_prime_UTR
AAAAGGACAAGGACAATCAA+TGG 0.512759 3_3:-72565272 None:intergenic
AATACTAATTCAGGTAGCTA+AGG 0.513911 3_3:+72565329 Msa0470480:three_prime_UTR
GTGTTTACGTCAGATTATGC+AGG 0.515147 3_3:-72563364 None:intergenic
CCTTGAATTCATTGCTAACC+AGG 0.515252 3_3:+72564154 Msa0470480:three_prime_UTR
GACAAGGACAATCAATGGCT+TGG 0.515924 3_3:-72565267 None:intergenic
GTTCATTTGAGGATTGCCAT+TGG 0.516301 3_3:-72563156 None:intergenic
GAACAATAAGGTCCACCCTT+AGG 0.516534 3_3:+72563175 Msa0470480:three_prime_UTR
GTTTACGTTACTGAGAGAAC+CGG 0.516706 3_3:-72564873 None:intergenic
AGGTGGATCTTGGTGAGTAA+TGG 0.516994 3_3:+72564908 Msa0470480:three_prime_UTR
GATTAAATACTCACCGTCGC+TGG 0.518095 3_3:+72564683 Msa0470480:three_prime_UTR
ATCGCTTACGTTGAAATGCC+TGG 0.518227 3_3:-72563922 None:intergenic
ATCAATATAGCACGCATGCT+GGG 0.519454 3_3:-72560934 None:intergenic
TATTCCACCCATCTCAAATC+GGG 0.520249 3_3:-72564606 None:intergenic
TATGGTGGTAAAGGTTGGTC+CGG 0.521256 3_3:-72564498 None:intergenic
TCACCGTCGCTGGTGACACT+TGG 0.521972 3_3:+72564693 Msa0470480:three_prime_UTR
TGGACTGCAGTCGCTTCCTA+TGG 0.522242 3_3:-72564516 None:intergenic
CGGAGGTCGCTTCTTGGCAG+AGG 0.523214 3_3:-72559518 None:intergenic
GCCGTAGGGAGTGAGTCTTC+GGG 0.524195 3_3:+72564578 Msa0470480:three_prime_UTR
TTTCCGTCTGGCGATGGTGA+CGG 0.524911 3_3:+72563685 Msa0470480:three_prime_UTR
TGTAATTGCTGCCTGTTCAT+CGG 0.526154 3_3:-72561235 None:intergenic
GAAGTAGTAGTAATGGCCTT+GGG 0.526382 3_3:-72559850 None:intergenic
ACTGGTCCCCTGATGGAGAA+TGG 0.526653 3_3:-72563540 None:intergenic
GTCGCTTCCTATGGTGGTAA+AGG 0.528712 3_3:-72564507 None:intergenic
TGAGTAAGCATGACAGACTC+GGG 0.529317 3_3:+72562771 Msa0470480:three_prime_UTR
TTAGGCCTCTCAACATTCAC+AGG 0.529361 3_3:+72563193 Msa0470480:three_prime_UTR
CTCTCAATAGAATCAACAGC+TGG 0.529999 3_3:-72560072 None:intergenic
TGCATCCGATCGTCATGACC+CGG 0.530784 3_3:-72563509 None:intergenic
TGAGAAAACCGGAAACGAAC+CGG 0.531378 3_3:+72563960 Msa0470480:three_prime_UTR
CTATTTACTTTCATCGGAGA+GGG 0.531904 3_3:-72564365 None:intergenic
GCGAGATAAACGGGTTGAGA+TGG 0.532136 3_3:+72564100 Msa0470480:three_prime_UTR
TGAAATATTCACCGTGAGGT+TGG 0.532205 3_3:-72563293 None:intergenic
GAAGAAGCTGCTATAAGTGA+TGG 0.532483 3_3:-72562058 None:intergenic
ATATTCACCGTGAGGTTGGA+TGG 0.533164 3_3:-72563289 None:intergenic
CTCTAGCATAAACTGAGGAC+TGG 0.534919 3_3:+72564026 Msa0470480:three_prime_UTR
ACTGTCAAATACAATGTATC+GGG 0.535115 3_3:-72561181 None:intergenic
TAATTGCTAGGTAGATGTAA+TGG 0.535808 3_3:+72562724 Msa0470480:three_prime_UTR
CTTCCTATGGTGGTAAAGGT+TGG 0.535859 3_3:-72564503 None:intergenic
TAAACGAGTTGCAGAGGAGG+TGG 0.535942 3_3:+72564891 Msa0470480:three_prime_UTR
TATATTTGGGTGACCAAGCA+GGG 0.537415 3_3:+72563221 Msa0470480:three_prime_UTR
CATAAGGTTGATAATGATGC+GGG 0.540407 3_3:+72563317 Msa0470480:three_prime_UTR
TAATCTTCCTAACCTTCTCA+AGG 0.541304 3_3:+72562832 Msa0470480:three_prime_UTR
CTTGCTAAGGGCAGTTGAAG+TGG 0.541586 3_3:-72565090 None:intergenic
ATGAAGATGGAACCCCTGCT+TGG 0.542282 3_3:-72563234 None:intergenic
TCGCCTGATTCAACGCGGGT+CGG 0.542292 3_3:-72564081 None:intergenic
TTTCCGGTAGGAGATACAGC+GGG 0.542707 3_3:+72564540 Msa0470480:three_prime_UTR
GGAAAAGCATATATTTGGCC+AGG 0.545625 3_3:-72562087 None:intergenic
GTGTCAACGCACGAGGATCC+CGG 0.545801 3_3:-72564657 None:intergenic
AGCCCCGCTGTATCTCCTAC+CGG 0.545958 3_3:-72564543 None:intergenic
GTGAGTAAGCATGACAGACT+CGG 0.546127 3_3:+72562770 Msa0470480:three_prime_UTR
GTGGGAGCAACCAATGGAGG+AGG 0.546493 3_3:-72559904 None:intergenic
AACAGAGTTAGAAGAATCAG+TGG 0.546517 3_3:+72564305 Msa0470480:three_prime_UTR
TCTTCTGCACCATTAGTGGA+TGG 0.546635 3_3:+72562653 Msa0470480:three_prime_UTR
TCATCTCCTGGTAAATCCGA+TGG 0.546673 3_3:+72559964 Msa0470480:CDS
TTGAATGTCCAATTCCCAGT+TGG 0.547557 3_3:+72562526 Msa0470480:three_prime_UTR
ATACCCATGGTTTCATTGCA+GGG 0.547788 3_3:-72562108 None:intergenic
TCTCAAAGCTTCCACTTCCC+GGG 0.551863 3_3:+72563491 Msa0470480:three_prime_UTR
TGAAAAGAAAGAAAAGAGAG+TGG 0.552363 3_3:-72559259 None:intergenic
GAAGAAGAATTGCATGGTGA+AGG 0.552536 3_3:-72559757 None:intergenic
GGTGTAATCTACACAGCAGT+TGG 0.553324 3_3:-72563811 None:intergenic
GAAGAGAGTCAGATTAGGAA+CGG 0.554045 3_3:+72563990 Msa0470480:three_prime_UTR
GGTGTAAACGCGTGTAAACC+CGG 0.554717 3_3:+72564261 Msa0470480:three_prime_UTR
GAAATTTCGGTCAACATCGA+TGG 0.555911 3_3:+72563747 Msa0470480:three_prime_UTR
CAGCTGACACGTGGTACACC+GGG 0.557055 3_3:+72564639 Msa0470480:three_prime_UTR
TTGAATCAGTTTCCTCAACC+CGG 0.557376 3_3:+72563444 Msa0470480:three_prime_UTR
CGGTGGCTGGCCAAGTTGGG+TGG 0.557379 3_3:-72564397 None:intergenic
GCATCCGATCGTCATGACCC+GGG 0.558569 3_3:-72563508 None:intergenic
CTTGTAGATATCACAGGCAA+AGG 0.560239 3_3:-72560353 None:intergenic
GGTGAGTTCCGTCGTGAGTG+AGG 0.560303 3_3:+72564439 Msa0470480:three_prime_UTR
AGTATGGATTTATCATCTCC+TGG 0.561386 3_3:+72559952 Msa0470480:CDS
GCATGGGACCGGGTTCGACC+TGG 0.562398 3_3:-72563832 None:intergenic
GTCAAGAAGTTGACCCTGGA+CGG 0.562749 3_3:-72563724 None:intergenic
TGATCCACCCGAATGGAACC+GGG 0.564000 3_3:-72563462 None:intergenic
AGAGATTAACAGAGGGTCCA+TGG 0.564220 3_3:-72563579 None:intergenic
AAATGATGAAGTAGTAGTAA+TGG 0.564314 3_3:-72559857 None:intergenic
TCAACCCGGTTCCATTCGGG+TGG 0.565272 3_3:+72563458 Msa0470480:three_prime_UTR
AATTCTTGAGGTATTGAAGG+AGG 0.566013 3_3:-72562470 None:intergenic
GTGAGTTGTAATTCTTGGTG+AGG 0.567118 3_3:+72564981 Msa0470480:three_prime_UTR
GGAGCAACCAATGGAGGAGG+AGG 0.567480 3_3:-72559901 None:intergenic
ACGGCGTCGTAGTATATGGT+TGG 0.567842 3_3:+72564846 Msa0470480:three_prime_UTR
AACCGGAAGAGAGTCAGATT+AGG 0.568038 3_3:+72563985 Msa0470480:three_prime_UTR
TTTGAGATGGGTGGAATAGA+CGG 0.568439 3_3:+72564611 Msa0470480:three_prime_UTR
TTTCGTCAAGAAGTTGACCC+TGG 0.568457 3_3:-72563728 None:intergenic
ACTTCAACTGCCCTTAGCAA+GGG 0.569324 3_3:+72565092 Msa0470480:three_prime_UTR
CCAGCTGACACGTGGTACAC+CGG 0.569828 3_3:+72564638 Msa0470480:three_prime_UTR
CTGATTCAAAGTGGTTCAGG+TGG 0.570012 3_3:-72563430 None:intergenic
ATTCTTGAGGTATTGAAGGA+GGG 0.570841 3_3:-72562469 None:intergenic
ATGTGACGGAAGCTAGAGCC+AGG 0.571700 3_3:+72564189 Msa0470480:three_prime_UTR
CAATGGCTTTCTCAACCGCA+TGG 0.572392 3_3:-72563849 None:intergenic
TATAGTATGTGTGGATGGAG+AGG 0.572816 3_3:+72565176 Msa0470480:three_prime_UTR
AAGCGTTAGATCGACACAAA+GGG 0.573590 3_3:+72562550 Msa0470480:three_prime_UTR
GTCTGGCGATGGTGACGGAA+AGG 0.573602 3_3:+72563690 Msa0470480:three_prime_UTR
GATTTGTGCACCTCAGGTGG+AGG 0.573990 3_3:+72561392 Msa0470480:CDS
AGATTTGTACGTGCAGCTCA+AGG 0.575208 3_3:+72561618 Msa0470480:CDS
CATAGAAACCGACATTCCAT+CGG 0.576594 3_3:-72559980 None:intergenic
GTATAGTAAATAATTAAGGT+GGG 0.577465 3_3:-72563047 None:intergenic
TTTCCCTGCAATGAAACCAT+GGG 0.578311 3_3:+72562105 Msa0470480:CDS
TTGGCATGTTGTTGAGCCAA+TGG 0.579141 3_3:+72563140 Msa0470480:three_prime_UTR
GATGTTAAAGCGGTAACAGG+TGG 0.582716 3_3:-72559466 None:intergenic
ACCGGAACATTGAAGGTAGT+GGG 0.583219 3_3:-72559922 None:intergenic
ATTTATTTGATCCACCCGAA+TGG 0.583814 3_3:-72563469 None:intergenic
GCCGTCGCAACGAGAAGACC+TGG 0.584072 3_3:-72564207 None:intergenic
CGGTTCACTACGTAAACACC+AGG 0.585044 3_3:+72563904 Msa0470480:three_prime_UTR
ATGTGCAACTGGTCCCCTGA+TGG 0.587384 3_3:-72563547 None:intergenic
AAGCACTCTAGTTGTAGTGA+AGG 0.587457 3_3:-72561980 None:intergenic
AAGGTAGTGGGAGCAACCAA+TGG 0.589135 3_3:-72559910 None:intergenic
AGATTACACCAGGTCGAACC+CGG 0.589385 3_3:+72563824 Msa0470480:three_prime_UTR
ATGTTAAAGCGGTAACAGGT+GGG 0.589966 3_3:-72559465 None:intergenic
AGGTTGGTCCGGCGAAGTAG+AGG 0.590368 3_3:-72564487 None:intergenic
AAGCATACAAATCAGAAGGC+TGG 0.591281 3_3:-72562257 None:intergenic
GGGTTTACACGCGTTTACAC+CGG 0.591493 3_3:-72564259 None:intergenic
GTAACAAAATGTAACCTGAT+GGG 0.593425 3_3:-72560134 None:intergenic
AAACACAAGACTCTTTCCAT+CGG 0.593429 3_3:+72563381 Msa0470480:three_prime_UTR
CCAAAGTGGATGAATTGTTG+CGG 0.593438 3_3:-72559570 None:intergenic
TGGTAAATCCGATGGAATGT+CGG 0.594531 3_3:+72559972 Msa0470480:CDS
TTCAAAGTGGTTCAGGTGGG+AGG 0.597857 3_3:-72563426 None:intergenic
GTTACCCGATTTGAGATGGG+TGG 0.599375 3_3:+72564602 Msa0470480:three_prime_UTR
AGTGAGATCCTCTACTTCGC+CGG 0.599693 3_3:+72564479 Msa0470480:three_prime_UTR
CAAGCATCTACGTGCATCTG+AGG 0.600841 3_3:+72560372 Msa0470480:CDS
CCATAAGGTTGATAATGATG+CGG 0.601624 3_3:+72563316 Msa0470480:three_prime_UTR
TGGTGTTTACGTAGTGAACC+GGG 0.601869 3_3:-72563902 None:intergenic
GCTGAAATCAGCGACGCCGT+AGG 0.602043 3_3:+72564563 Msa0470480:three_prime_UTR
GAATTGGCCGTTGAAATTGA+CGG 0.602106 3_3:+72564947 Msa0470480:three_prime_UTR
TAACACATACTTCAAGGATG+AGG 0.602249 3_3:+72561434 Msa0470480:CDS
ATTGATTGATTGGCTAGTGG+AGG 0.603421 3_3:+72560951 Msa0470480:CDS
GACATTCCATCGGATTTACC+AGG 0.603450 3_3:-72559970 None:intergenic
GCCAGGTCTTCTCGTTGCGA+CGG 0.603694 3_3:+72564206 Msa0470480:three_prime_UTR
CAAACTACATTGTTAGTACA+GGG 0.603915 3_3:-72563120 None:intergenic
GGAGATTTGTGCACCTCAGG+TGG 0.604989 3_3:+72561389 Msa0470480:CDS
GGACCAACCTTTACCACCAT+AGG 0.605783 3_3:+72564500 Msa0470480:three_prime_UTR
CAGCTGTTGATTCTATTGAG+AGG 0.606902 3_3:+72560073 Msa0470480:CDS
ACTGCAGTCGCTTCCTATGG+TGG 0.607219 3_3:-72564513 None:intergenic
AAGCGATCCATTCTCCATCA+GGG 0.608545 3_3:+72563533 Msa0470480:three_prime_UTR
TTGAGTATAGTATGTGTGGA+TGG 0.610244 3_3:+72565171 Msa0470480:three_prime_UTR
TGTGAATGTTGAGAGGCCTA+AGG 0.611126 3_3:-72563191 None:intergenic
ACTTCCCGGGTCATGACGAT+CGG 0.612635 3_3:+72563504 Msa0470480:three_prime_UTR
GCAAAGGTAGCACAGAGTTG+AGG 0.614108 3_3:-72560337 None:intergenic
TCACATCGAATTGTTCGACC+TGG 0.614521 3_3:-72564172 None:intergenic
ATCGAACGAGTTACACCACC+GGG 0.614798 3_3:-72564279 None:intergenic
ACACAAGCATACAAATCAGA+AGG 0.618369 3_3:-72562261 None:intergenic
ACCTGAACCATCCAACCTCA+CGG 0.618847 3_3:+72563282 Msa0470480:three_prime_UTR
CTTCATGGAGAAAATTCAGA+AGG 0.619401 3_3:+72560903 Msa0470480:CDS
TCACTCACGACGGAACTCAC+CGG 0.621307 3_3:-72564437 None:intergenic
TAGATGCTTGTAGATATCAC+AGG 0.621919 3_3:-72560359 None:intergenic
AATCTACGTGTCAACGCACG+AGG 0.623806 3_3:-72564664 None:intergenic
GTGAGGGTGATGAATTGGGA+GGG 0.624915 3_3:+72564998 Msa0470480:three_prime_UTR
AATGGCTTTCTCAACCGCAT+GGG 0.628096 3_3:-72563848 None:intergenic
AATTAGAATCAGAAATGTTG+AGG 0.628229 3_3:-72560110 None:intergenic
ACTATTTACTTTCATCGGAG+AGG 0.631119 3_3:-72564366 None:intergenic
ACCCGAAGACTCACTCCCTA+CGG 0.633343 3_3:-72564579 None:intergenic
GTGAATGTTGAGAGGCCTAA+GGG 0.633649 3_3:-72563190 None:intergenic
GGACACTCCGTCAATTTCAA+CGG 0.634749 3_3:-72564954 None:intergenic
GGTCGAACAATTCGATGTGA+CGG 0.634875 3_3:+72564175 Msa0470480:three_prime_UTR
TATATTGATTGATTGGCTAG+TGG 0.635001 3_3:+72560948 Msa0470480:CDS
ATTAACAGAGGGTCCATGGT+CGG 0.636917 3_3:-72563575 None:intergenic
TGAGTTGTAATTCTTGGTGA+GGG 0.638117 3_3:+72564982 Msa0470480:three_prime_UTR
TGAGTGTAATGCTGCAATGT+CGG 0.639670 3_3:-72562231 None:intergenic
AGGTCGCTTCTTGGCAGAGG+CGG 0.640133 3_3:-72559515 None:intergenic
AGCACTCTAGTTGTAGTGAA+GGG 0.640504 3_3:-72561979 None:intergenic
ATGTGGTCTGTAAATGGTGA+TGG 0.641573 3_3:-72563086 None:intergenic
TAGGACTGTTGCAACAAAGA+CGG 0.642862 3_3:-72562296 None:intergenic
TTGGTGAGGTTAGTGAGCGG+AGG 0.642894 3_3:-72559535 None:intergenic
GTCGGGTATCACAAGTGCAG+AGG 0.643154 3_3:-72564063 None:intergenic
TTTCCGTCACCATCGCCAGA+CGG 0.643830 3_3:-72563688 None:intergenic
AAAGCGTTAGATCGACACAA+AGG 0.644624 3_3:+72562549 Msa0470480:three_prime_UTR
ACGTAAACGAGTTGCAGAGG+AGG 0.645778 3_3:+72564888 Msa0470480:three_prime_UTR
TATCTCGCCTGATTCAACGC+GGG 0.645965 3_3:-72564085 None:intergenic
CATCGAACGAGTTACACCAC+CGG 0.646119 3_3:-72564280 None:intergenic
AGCGATCCATTCTCCATCAG+GGG 0.647416 3_3:+72563534 Msa0470480:three_prime_UTR
AAACCAAGTGTCACCAGCGA+CGG 0.647626 3_3:-72564696 None:intergenic
GTGAGGTGATTAGGCAACAG+AGG 0.652977 3_3:+72564750 Msa0470480:three_prime_UTR
GTAACGTAAACGAGTTGCAG+AGG 0.653307 3_3:+72564885 Msa0470480:three_prime_UTR
TTGAGGAAACTGATTCAAAG+TGG 0.654694 3_3:-72563439 None:intergenic
ATATTTGGGTGACCAAGCAG+GGG 0.655465 3_3:+72563222 Msa0470480:three_prime_UTR
TTGCACATTGTATCCGACCA+TGG 0.655497 3_3:+72563562 Msa0470480:three_prime_UTR
GTAGTTAGCTCTGCCAAGTG+TGG 0.656194 3_3:+72565037 Msa0470480:three_prime_UTR
TGATTCAAAGTGGTTCAGGT+GGG 0.658589 3_3:-72563429 None:intergenic
TAACAAAATTCCTCCACCTG+AGG 0.658688 3_3:-72561402 None:intergenic
TGATTGGTGAGGTTAGTGAG+CGG 0.659282 3_3:-72559538 None:intergenic
AATACAAAGGTAGAATACAA+AGG 0.659652 3_3:+72562979 Msa0470480:three_prime_UTR
TCAAGCCTGTGAATGTTGAG+AGG 0.661021 3_3:-72563198 None:intergenic
GAGCTTGAAGAAGAATTGCA+TGG 0.661998 3_3:-72559763 None:intergenic
GACTGTTGCAACAAAGACGG+TGG 0.666327 3_3:-72562293 None:intergenic
TAAGCGATTCTGTCTCCAGA+GGG 0.666512 3_3:+72563937 Msa0470480:three_prime_UTR
CGGTACAAAATAGTTGAGCA+CGG 0.669587 3_3:-72564417 None:intergenic
GTTGTTCTCTGATGTTAAAG+CGG 0.669653 3_3:-72559476 None:intergenic
TGCAGCTCAAGGAATTGATG+AGG 0.672914 3_3:+72561629 Msa0470480:CDS
TAATGGATGTGAGATTTGGA+AGG 0.673471 3_3:+72564925 Msa0470480:three_prime_UTR
ACTGCTGTGTAGATTACACC+AGG 0.674326 3_3:+72563814 Msa0470480:three_prime_UTR
GGTGAGGGTGATGAATTGGG+AGG 0.676824 3_3:+72564997 Msa0470480:three_prime_UTR
AGGTCGAACCCGGTCCCATG+CGG 0.679189 3_3:+72563834 Msa0470480:three_prime_UTR
TGATAAGATAAAGTGAGACG+TGG 0.680026 3_3:+72565242 Msa0470480:three_prime_UTR
CAAGAATTACAACTCACTGA+CGG 0.682641 3_3:-72564975 None:intergenic
TATGACCTGATCGACCAGAA+CGG 0.684219 3_3:+72563650 Msa0470480:three_prime_UTR
GTAGTGGGAGCAACCAATGG+AGG 0.684730 3_3:-72559907 None:intergenic
GTAAGCGATTCTGTCTCCAG+AGG 0.689173 3_3:+72563936 Msa0470480:three_prime_UTR
GTTTACGTAGTGAACCGGGA+CGG 0.690796 3_3:-72563898 None:intergenic
ATGGTGAAATATTCACCGTG+AGG 0.692339 3_3:-72563297 None:intergenic
ACGGCAGTCCAGCTGACACG+TGG 0.692685 3_3:+72564630 Msa0470480:three_prime_UTR
CGGGCTTAAGAGATTAACAG+AGG 0.696246 3_3:-72563587 None:intergenic
CTTTGCTTCAGAAAGCACTG+AGG 0.697797 3_3:-72563782 None:intergenic
TTCCGGTAGGAGATACAGCG+GGG 0.698891 3_3:+72564541 Msa0470480:three_prime_UTR
GGAGAAATACAATCAGCACA+AGG 0.701897 3_3:+72562341 Msa0470480:CDS
AGAGAGTCAGATTAGGAACG+GGG 0.703572 3_3:+72563992 Msa0470480:three_prime_UTR
GGGCTTAAGAGATTAACAGA+GGG 0.706815 3_3:-72563586 None:intergenic
TTAACATCAGAGAACAACGC+CGG 0.712549 3_3:+72559481 Msa0470480:CDS
AATGTTGAGAGGCCTAAGGG+TGG 0.712549 3_3:-72563187 None:intergenic
TTTCATCGGAGAGGGAACGA+CGG 0.712613 3_3:-72564357 None:intergenic
GAGTAAGCATGACAGACTCG+GGG 0.716325 3_3:+72562772 Msa0470480:three_prime_UTR
TTATCTCGCCTGATTCAACG+CGG 0.721298 3_3:-72564086 None:intergenic
TATGTGTGGATGGAGAGGAG+AGG 0.726717 3_3:+72565181 Msa0470480:three_prime_UTR
ACAGGGCTACATGCACAATG+TGG 0.743092 3_3:-72563103 None:intergenic
GTTGAGACTGTGTTTCTGTG+AGG 0.743197 3_3:+72564733 Msa0470480:three_prime_UTR
GATTACATGAACTAGCACAA+TGG 0.747721 3_3:-72562814 None:intergenic
ACATTCTCTAGCATAAACTG+AGG 0.757075 3_3:+72564021 Msa0470480:three_prime_UTR
ACACAAGACTCTTTCCATCG+GGG 0.760389 3_3:+72563383 Msa0470480:three_prime_UTR
TACAAAATAGTTGAGCACGG+TGG 0.775482 3_3:-72564414 None:intergenic
GTAAACGCGTGTAAACCCGG+TGG 0.796307 3_3:+72564264 Msa0470480:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTGTTATTTATGA+AGG - chr3_3:72559215-72559234 None:intergenic 10.0%
!!! GAATTCATTTTTATTATTTT+TGG + chr3_3:72561354-72561373 Msa0470480:intron 10.0%
!! TAATGTATAGTAAATAATTA+AGG - chr3_3:72563054-72563073 None:intergenic 10.0%
!!! TAATATTGATAATGATTACA+TGG + chr3_3:72560312-72560331 Msa0470480:CDS 15.0%
!!! TTTTTAATTGGTGATTTATA+AGG + chr3_3:72561661-72561680 Msa0470480:intron 15.0%
!!! AATCTTTAAAGAAGATGAAA+GGG - chr3_3:72559611-72559630 None:intergenic 20.0%
!!! ATTATAACGATTTTGGAATT+GGG + chr3_3:72559686-72559705 Msa0470480:intron 20.0%
!! TTAATAACTGTTCTGATATA+TGG + chr3_3:72560478-72560497 Msa0470480:intron 20.0%
!! ACTAGTTAGTGAAAAAAATT+GGG + chr3_3:72560582-72560601 Msa0470480:intron 20.0%
!! TTTAATCAAAATGTAGGAAT+TGG - chr3_3:72561014-72561033 None:intergenic 20.0%
!! GACTAATTTAATCAAAATGT+AGG - chr3_3:72561020-72561039 None:intergenic 20.0%
!!! TTTTGATTAAATTAGTCATG+TGG + chr3_3:72561023-72561042 Msa0470480:intron 20.0%
!! AATCAACTCTATATTCTAAT+TGG - chr3_3:72561087-72561106 None:intergenic 20.0%
!!! TCTTATATTGTTTTATCTCT+AGG + chr3_3:72561318-72561337 Msa0470480:intron 20.0%
!! ATTCGTTCTCTAATTATAAT+GGG - chr3_3:72562160-72562179 None:intergenic 20.0%
!!! TTGTATTGTGTAAACTTTTT+TGG - chr3_3:72562966-72562985 None:intergenic 20.0%
!! AAAAAGTTTACACAATACAA+AGG + chr3_3:72562966-72562985 Msa0470480:three_prime_UTR 20.0%
!! GTATAGTAAATAATTAAGGT+GGG - chr3_3:72563050-72563069 None:intergenic 20.0%
!! TGTATAGTAAATAATTAAGG+TGG - chr3_3:72563051-72563070 None:intergenic 20.0%
!! TCATAAGAATCTTTACATAA+TGG - chr3_3:72563635-72563654 None:intergenic 20.0%
!! AAGACAAAAATCTCAAAAAA+AGG - chr3_3:72565292-72565311 None:intergenic 20.0%
!!! AACTTCTTTTACTTTTGCTA+TGG - chr3_3:72559326-72559345 None:intergenic 25.0%
!! GAATCTTTAAAGAAGATGAA+AGG - chr3_3:72559612-72559631 None:intergenic 25.0%
! ATCACGCATAAAATTCAAAT+GGG - chr3_3:72559668-72559687 None:intergenic 25.0%
! AATCACGCATAAAATTCAAA+TGG - chr3_3:72559669-72559688 None:intergenic 25.0%
!!! GATTATAACGATTTTGGAAT+TGG + chr3_3:72559685-72559704 Msa0470480:intron 25.0%
! AAATGATGAAGTAGTAGTAA+TGG - chr3_3:72559860-72559879 None:intergenic 25.0%
! TTATCCACATATTCAATATC+AGG - chr3_3:72560042-72560061 None:intergenic 25.0%
! AATTAGAATCAGAAATGTTG+AGG - chr3_3:72560113-72560132 None:intergenic 25.0%
!!! CTAATGATTGATTTGTTTTC+AGG + chr3_3:72560235-72560254 Msa0470480:intron 25.0%
! AATATAGATCATTGTCAACA+GGG - chr3_3:72560412-72560431 None:intergenic 25.0%
! CACTAGTTAGTGAAAAAAAT+TGG + chr3_3:72560581-72560600 Msa0470480:intron 25.0%
!!! TTATTATTGTTTTTACAGCC+AGG + chr3_3:72560769-72560788 Msa0470480:intron 25.0%
!! CTTATCTTTTCCAAATTTTC+TGG + chr3_3:72560849-72560868 Msa0470480:intron 25.0%
! TACTGTCAAATACAATGTAT+CGG - chr3_3:72561185-72561204 None:intergenic 25.0%
!!! TATTTTTGGCAGTAAATATG+AGG + chr3_3:72561368-72561387 Msa0470480:intron 25.0%
!!! AGGTATGTTCTGTTTTTAAT+TGG + chr3_3:72561649-72561668 Msa0470480:intron 25.0%
! TAGCATTCATTTGTATGTTA+TGG + chr3_3:72561879-72561898 Msa0470480:intron 25.0%
! AAGGGTCAATAATTTAGAAA+TGG - chr3_3:72561929-72561948 None:intergenic 25.0%
!!! AATTATTGACCCTTTTTTCT+TGG + chr3_3:72561935-72561954 Msa0470480:intron 25.0%
! CAAATGAAACCAAGAAAAAA+GGG - chr3_3:72561947-72561966 None:intergenic 25.0%
! GATTCGTTCTCTAATTATAA+TGG - chr3_3:72562161-72562180 None:intergenic 25.0%
!!! AAAAATTCTTGAGGTATTGA+AGG - chr3_3:72562476-72562495 None:intergenic 25.0%
!!! TATTGTGTAAACTTTTTTGG+TGG - chr3_3:72562963-72562982 None:intergenic 25.0%
! AATACAAAGGTAGAATACAA+AGG + chr3_3:72562979-72562998 Msa0470480:three_prime_UTR 25.0%
! GTTTATTGTTAATGTGGATT+TGG - chr3_3:72563005-72563024 None:intergenic 25.0%
! TTGAGAGTTTATTGTTAATG+TGG - chr3_3:72563011-72563030 None:intergenic 25.0%
! ACTCATAATTCTTATGAAGA+TGG - chr3_3:72563250-72563269 None:intergenic 25.0%
!!! AATTTTGAGTATAGTATGTG+TGG + chr3_3:72565167-72565186 Msa0470480:three_prime_UTR 25.0%
!! GCAGATTACATTTTATTAGT+AGG + chr3_3:72565205-72565224 Msa0470480:three_prime_UTR 25.0%
! AAAATCTCAAAAAAAGGACA+AGG - chr3_3:72565286-72565305 None:intergenic 25.0%
TGAAAAGAAAGAAAAGAGAG+TGG - chr3_3:72559262-72559281 None:intergenic 30.0%
GGGAAAAAAAAATACCAAAG+TGG - chr3_3:72559587-72559606 None:intergenic 30.0%
TTTAAAGAAGATGAAAGGGT+GGG - chr3_3:72559607-72559626 None:intergenic 30.0%
! ATGCGTGATTATAACGATTT+TGG + chr3_3:72559679-72559698 Msa0470480:intron 30.0%
!! TGGGTTGTTGTTAATTTTGT+AGG + chr3_3:72559705-72559724 Msa0470480:intron 30.0%
GATTTAACATTCGACAAAGT+AGG - chr3_3:72559811-72559830 None:intergenic 30.0%
! ACTACTACTTCATCATTTTC+TGG + chr3_3:72559862-72559881 Msa0470480:CDS 30.0%
GTAACAAAATGTAACCTGAT+GGG - chr3_3:72560137-72560156 None:intergenic 30.0%
AGTAACAAAATGTAACCTGA+TGG - chr3_3:72560138-72560157 None:intergenic 30.0%
!!! GATTACCCTTTTGATTTTAC+TGG + chr3_3:72560195-72560214 Msa0470480:intron 30.0%
ATGCACCAGTAAAATCAAAA+GGG - chr3_3:72560203-72560222 None:intergenic 30.0%
AATGCACCAGTAAAATCAAA+AGG - chr3_3:72560204-72560223 None:intergenic 30.0%
!! ATTCTTGTTGAGTTGGAAAA+GGG + chr3_3:72560277-72560296 Msa0470480:CDS 30.0%
ATATAGATCATTGTCAACAG+GGG - chr3_3:72560411-72560430 None:intergenic 30.0%
CAATATAGATCATTGTCAAC+AGG - chr3_3:72560413-72560432 None:intergenic 30.0%
!!! CATTTTTTATCCTTTGCCAA+AGG + chr3_3:72560441-72560460 Msa0470480:intron 30.0%
AAACTCAAAATCAATGCCTT+TGG - chr3_3:72560460-72560479 None:intergenic 30.0%
! ATTAATCACTTAAGAGTGCA+TGG + chr3_3:72560710-72560729 Msa0470480:intron 30.0%
!! AATTTGTTACATTACTGTCC+TGG - chr3_3:72560790-72560809 None:intergenic 30.0%
! TATATTGATTGATTGGCTAG+TGG + chr3_3:72560948-72560967 Msa0470480:CDS 30.0%
AATTAGTCATGTGGTCAATT+TGG + chr3_3:72561032-72561051 Msa0470480:intron 30.0%
ACTGTCAAATACAATGTATC+GGG - chr3_3:72561184-72561203 None:intergenic 30.0%
AACTGATAACACATACTTCA+AGG + chr3_3:72561428-72561447 Msa0470480:CDS 30.0%
TTAGATTTGCAAGCTTCAAA+TGG - chr3_3:72561501-72561520 None:intergenic 30.0%
TAAAGCAAATCATTTCATGC+AGG + chr3_3:72561518-72561537 Msa0470480:intron 30.0%
!! CTCAAGAAGCATTTAATTGT+TGG - chr3_3:72561597-72561616 None:intergenic 30.0%
GATGTAAGCTAAGAAGTAAT+TGG + chr3_3:72561767-72561786 Msa0470480:intron 30.0%
ATCTCATCAAATGTGAGAAA+TGG - chr3_3:72561860-72561879 None:intergenic 30.0%
GCAAATGAAACCAAGAAAAA+AGG - chr3_3:72561948-72561967 None:intergenic 30.0%
ATACTCCAACAGAGATAATT+CGG - chr3_3:72562020-72562039 None:intergenic 30.0%
! TGATTTGTATGCTTGTGTAA+AGG + chr3_3:72562266-72562285 Msa0470480:CDS 30.0%
ATTGCAGGCAAATTAGAATT+AGG - chr3_3:72562318-72562337 None:intergenic 30.0%
! TTCTAATTTGCCTGCAATTA+AGG + chr3_3:72562320-72562339 Msa0470480:CDS 30.0%
TTGTATTTCTCCTTAATTGC+AGG - chr3_3:72562333-72562352 None:intergenic 30.0%
GGGAAAAGATGTTTAGAAAT+TGG - chr3_3:72562701-72562720 None:intergenic 30.0%
! TCTTTTCCCAAATAATTGCT+AGG + chr3_3:72562712-72562731 Msa0470480:three_prime_UTR 30.0%
CATCTACCTAGCAATTATTT+GGG - chr3_3:72562721-72562740 None:intergenic 30.0%
ACATCTACCTAGCAATTATT+TGG - chr3_3:72562722-72562741 None:intergenic 30.0%
TAATTGCTAGGTAGATGTAA+TGG + chr3_3:72562724-72562743 Msa0470480:three_prime_UTR 30.0%
CAAACTACATTGTTAGTACA+GGG - chr3_3:72563123-72563142 None:intergenic 30.0%
ATTCACAGGCTTGATATATT+TGG + chr3_3:72563207-72563226 Msa0470480:three_prime_UTR 30.0%
TTCACAGGCTTGATATATTT+GGG + chr3_3:72563208-72563227 Msa0470480:three_prime_UTR 30.0%
TCAACTTCTTGACGAAATTT+CGG + chr3_3:72563734-72563753 Msa0470480:three_prime_UTR 30.0%
AAAAAAGGTTTCTGATGCAA+TGG - chr3_3:72563869-72563888 None:intergenic 30.0%
!!! TTGCATCAGAAACCTTTTTT+CGG + chr3_3:72563869-72563888 Msa0470480:three_prime_UTR 30.0%
ATCGCACTATTTACTTTCAT+CGG - chr3_3:72564374-72564393 None:intergenic 30.0%
AGCTACCTGAATTAGTATTA+GGG - chr3_3:72565328-72565347 None:intergenic 30.0%
TAGCTACCTGAATTAGTATT+AGG - chr3_3:72565329-72565348 None:intergenic 30.0%
AATACTAATTCAGGTAGCTA+AGG + chr3_3:72565329-72565348 Msa0470480:three_prime_UTR 30.0%
! AGGAATTGTGCTTTTGATGA+GGG - chr3_3:72559195-72559214 None:intergenic 35.0%
! AAGGAATTGTGCTTTTGATG+AGG - chr3_3:72559196-72559215 None:intergenic 35.0%
GTTGTTCTCTGATGTTAAAG+CGG - chr3_3:72559479-72559498 None:intergenic 35.0%
! CTTTAAAGAAGATGAAAGGG+TGG - chr3_3:72559608-72559627 None:intergenic 35.0%
! TACTGTGAATGTTTTTCCCA+AGG + chr3_3:72559834-72559853 Msa0470480:CDS 35.0%
! CTACTTCATCATTTTCTGGA+AGG + chr3_3:72559866-72559885 Msa0470480:CDS 35.0%
AAATCCATACTACTCGAAAC+CGG - chr3_3:72559943-72559962 None:intergenic 35.0%
AGTATGGATTTATCATCTCC+TGG + chr3_3:72559952-72559971 Msa0470480:CDS 35.0%
GAGTCCTGATATTGAATATG+TGG + chr3_3:72560035-72560054 Msa0470480:CDS 35.0%
TCTGATTCTAATTACCCATC+AGG + chr3_3:72560120-72560139 Msa0470480:CDS 35.0%
TAGAGACATTCTTGTTGAGT+TGG + chr3_3:72560270-72560289 Msa0470480:CDS 35.0%
!! CATTCTTGTTGAGTTGGAAA+AGG + chr3_3:72560276-72560295 Msa0470480:CDS 35.0%
TAGATGCTTGTAGATATCAC+AGG - chr3_3:72560362-72560381 None:intergenic 35.0%
AAAATCAATGCCTTTGGCAA+AGG - chr3_3:72560454-72560473 None:intergenic 35.0%
TGATTAATGAGCTTCAACGA+AGG - chr3_3:72560698-72560717 None:intergenic 35.0%
! GTCTGAGATTCCAGAAAATT+TGG - chr3_3:72560862-72560881 None:intergenic 35.0%
TGGAATCTCAGACAAAGAAA+AGG + chr3_3:72560869-72560888 Msa0470480:intron 35.0%
CTTCATGGAGAAAATTCAGA+AGG + chr3_3:72560903-72560922 Msa0470480:CDS 35.0%
! TGCGTGCTATATTGATTGAT+TGG + chr3_3:72560941-72560960 Msa0470480:CDS 35.0%
CTTGTGGTCAATTAGTTATG+TGG + chr3_3:72560982-72561001 Msa0470480:intron 35.0%
GATAATTAGCACACACAAAG+AGG - chr3_3:72561116-72561135 None:intergenic 35.0%
CTATATCTATTTCCAACTGC+AGG + chr3_3:72561135-72561154 Msa0470480:intron 35.0%
TACATCGATCGATATCTTTC+TGG + chr3_3:72561208-72561227 Msa0470480:CDS 35.0%
ACATCGATCGATATCTTTCT+GGG + chr3_3:72561209-72561228 Msa0470480:CDS 35.0%
AGGCAGCAATTACAATTACT+TGG + chr3_3:72561244-72561263 Msa0470480:CDS 35.0%
TAACACATACTTCAAGGATG+AGG + chr3_3:72561434-72561453 Msa0470480:CDS 35.0%
GAGGTTTGTGTTGAATTCTT+TGG + chr3_3:72561453-72561472 Msa0470480:intron 35.0%
CTTACATCATGTGTTCTTAC+AGG - chr3_3:72561755-72561774 None:intergenic 35.0%
GGCACATGACTCTAATTATT+AGG + chr3_3:72561900-72561919 Msa0470480:intron 35.0%
! TGCAGGGAAAAGCATATATT+TGG - chr3_3:72562095-72562114 None:intergenic 35.0%
TTTCCTTTGCTTAACATGCT+TGG + chr3_3:72562187-72562206 Msa0470480:intron 35.0%
ACACAAGCATACAAATCAGA+AGG - chr3_3:72562264-72562283 None:intergenic 35.0%
!! ATTCTTGAGGTATTGAAGGA+GGG - chr3_3:72562472-72562491 None:intergenic 35.0%
!! AATTCTTGAGGTATTGAAGG+AGG - chr3_3:72562473-72562492 None:intergenic 35.0%
!! CAGTTCTGGAAAAATTCTTG+AGG - chr3_3:72562485-72562504 None:intergenic 35.0%
GATTACATGAACTAGCACAA+TGG - chr3_3:72562817-72562836 None:intergenic 35.0%
TAATCTTCCTAACCTTCTCA+AGG + chr3_3:72562832-72562851 Msa0470480:three_prime_UTR 35.0%
TTTCAAACCTTGAGAAGGTT+AGG - chr3_3:72562842-72562861 None:intergenic 35.0%
!! CTGTTTTTCAAACCTTGAGA+AGG - chr3_3:72562847-72562866 None:intergenic 35.0%
AGGTGGGATGTAAAAATTGT+AGG - chr3_3:72563034-72563053 None:intergenic 35.0%
CCAAACTACATTGTTAGTAC+AGG - chr3_3:72563124-72563143 None:intergenic 35.0%
CCTGTACTAACAATGTAGTT+TGG + chr3_3:72563121-72563140 Msa0470480:three_prime_UTR 35.0%
ACGGTGAATATTTCACCATA+AGG + chr3_3:72563301-72563320 Msa0470480:three_prime_UTR 35.0%
!! CCATAAGGTTGATAATGATG+CGG + chr3_3:72563316-72563335 Msa0470480:three_prime_UTR 35.0%
!! CATAAGGTTGATAATGATGC+GGG + chr3_3:72563317-72563336 Msa0470480:three_prime_UTR 35.0%
AAACACAAGACTCTTTCCAT+CGG + chr3_3:72563381-72563400 Msa0470480:three_prime_UTR 35.0%
! AAACTGATTCAAAGTGGTTC+AGG - chr3_3:72563436-72563455 None:intergenic 35.0%
! TTGAGGAAACTGATTCAAAG+TGG - chr3_3:72563442-72563461 None:intergenic 35.0%
ATTTATTTGATCCACCCGAA+TGG - chr3_3:72563472-72563491 None:intergenic 35.0%
!!! AAATGGATTGTTTTCCGTTC+TGG - chr3_3:72563667-72563686 None:intergenic 35.0%
! AAAACAATCCATTTTCCGTC+TGG + chr3_3:72563673-72563692 Msa0470480:three_prime_UTR 35.0%
ACATTCTCTAGCATAAACTG+AGG + chr3_3:72564021-72564040 Msa0470480:three_prime_UTR 35.0%
AACAGAGTTAGAAGAATCAG+TGG + chr3_3:72564305-72564324 Msa0470480:three_prime_UTR 35.0%
CTATTTACTTTCATCGGAGA+GGG - chr3_3:72564368-72564387 None:intergenic 35.0%
ACTATTTACTTTCATCGGAG+AGG - chr3_3:72564369-72564388 None:intergenic 35.0%
GTAGTATATGGTTGGAAAAC+CGG + chr3_3:72564854-72564873 Msa0470480:three_prime_UTR 35.0%
!! TGAGTAATGGATGTGAGATT+TGG + chr3_3:72564921-72564940 Msa0470480:three_prime_UTR 35.0%
! TAATGGATGTGAGATTTGGA+AGG + chr3_3:72564925-72564944 Msa0470480:three_prime_UTR 35.0%
ATGTGAGATTTGGAAGGAAT+TGG + chr3_3:72564931-72564950 Msa0470480:three_prime_UTR 35.0%
CAAGAATTACAACTCACTGA+CGG - chr3_3:72564978-72564997 None:intergenic 35.0%
TGAGTTGTAATTCTTGGTGA+GGG + chr3_3:72564982-72565001 Msa0470480:three_prime_UTR 35.0%
TTGAGTATAGTATGTGTGGA+TGG + chr3_3:72565171-72565190 Msa0470480:three_prime_UTR 35.0%
TGATAAGATAAAGTGAGACG+TGG + chr3_3:72565242-72565261 Msa0470480:three_prime_UTR 35.0%
AAAAGGACAAGGACAATCAA+TGG - chr3_3:72565275-72565294 None:intergenic 35.0%
! AATTGTGCTTTTGATGAGGG+GGG - chr3_3:72559192-72559211 None:intergenic 40.0%
! GAATTGTGCTTTTGATGAGG+GGG - chr3_3:72559193-72559212 None:intergenic 40.0%
! GGAATTGTGCTTTTGATGAG+GGG - chr3_3:72559194-72559213 None:intergenic 40.0%
!! TCAGAGCGTTTCTTTTGCTT+TGG - chr3_3:72559301-72559320 None:intergenic 40.0%
TTCTTCAACAACGTCGTCAA+TGG + chr3_3:72559432-72559451 Msa0470480:CDS 40.0%
ATGTTAAAGCGGTAACAGGT+GGG - chr3_3:72559468-72559487 None:intergenic 40.0%
TCTGATGTTAAAGCGGTAAC+AGG - chr3_3:72559472-72559491 None:intergenic 40.0%
TTAACATCAGAGAACAACGC+CGG + chr3_3:72559481-72559500 Msa0470480:CDS 40.0%
!!! GGGAAGAATTTTGATTGGTG+AGG - chr3_3:72559552-72559571 None:intergenic 40.0%
!! GTTGCGGGAAGAATTTTGAT+TGG - chr3_3:72559557-72559576 None:intergenic 40.0%
CAAAGTGGATGAATTGTTGC+GGG - chr3_3:72559572-72559591 None:intergenic 40.0%
CCAAAGTGGATGAATTGTTG+CGG - chr3_3:72559573-72559592 None:intergenic 40.0%
GAAGAAGAATTGCATGGTGA+AGG - chr3_3:72559760-72559779 None:intergenic 40.0%
GAGCTTGAAGAAGAATTGCA+TGG - chr3_3:72559766-72559785 None:intergenic 40.0%
GGGAAAAACATTCACAGTAG+CGG - chr3_3:72559833-72559852 None:intergenic 40.0%
GAAGTAGTAGTAATGGCCTT+GGG - chr3_3:72559853-72559872 None:intergenic 40.0%
TGAAGTAGTAGTAATGGCCT+TGG - chr3_3:72559854-72559873 None:intergenic 40.0%
TGGTAAATCCGATGGAATGT+CGG + chr3_3:72559972-72559991 Msa0470480:CDS 40.0%
CATAGAAACCGACATTCCAT+CGG - chr3_3:72559983-72560002 None:intergenic 40.0%
CTCTCAATAGAATCAACAGC+TGG - chr3_3:72560075-72560094 None:intergenic 40.0%
!! CAGCTGTTGATTCTATTGAG+AGG + chr3_3:72560073-72560092 Msa0470480:CDS 40.0%
CTTGTAGATATCACAGGCAA+AGG - chr3_3:72560356-72560375 None:intergenic 40.0%
!! TTTAACCCTCCGTTTTTCGA+GGG + chr3_3:72560605-72560624 Msa0470480:intron 40.0%
AATTTCCCTCGAAAAACGGA+GGG - chr3_3:72560613-72560632 None:intergenic 40.0%
!!! TCCGTTTTTCGAGGGAAATT+GGG + chr3_3:72560613-72560632 Msa0470480:intron 40.0%
ACCCAATTTCCCTCGAAAAA+CGG - chr3_3:72560617-72560636 None:intergenic 40.0%
TCTAGCTAGGAGAGTAAACT+TGG + chr3_3:72560654-72560673 Msa0470480:intron 40.0%
CAACGAAGGTCAAATCGATT+CGG - chr3_3:72560684-72560703 None:intergenic 40.0%
TTCTCCATGAAGTCTGTTGA+AGG - chr3_3:72560895-72560914 None:intergenic 40.0%
ATCAATATAGCACGCATGCT+GGG - chr3_3:72560937-72560956 None:intergenic 40.0%
AATCAATATAGCACGCATGC+TGG - chr3_3:72560938-72560957 None:intergenic 40.0%
! ATTGATTGATTGGCTAGTGG+AGG + chr3_3:72560951-72560970 Msa0470480:CDS 40.0%
AGTGGAGGTAATGTTTCTTG+TGG + chr3_3:72560966-72560985 Msa0470480:intron 40.0%
TATCTATTTCCAACTGCAGG+TGG + chr3_3:72561138-72561157 Msa0470480:intron 40.0%
TGTAATTGCTGCCTGTTCAT+CGG - chr3_3:72561238-72561257 None:intergenic 40.0%
TCTATGATGATTGCCTCGTA+AGG + chr3_3:72561274-72561293 Msa0470480:intron 40.0%
AAGTTGTATGCTTCCTTACG+AGG - chr3_3:72561290-72561309 None:intergenic 40.0%
TAACAAAATTCCTCCACCTG+AGG - chr3_3:72561405-72561424 None:intergenic 40.0%
! TTTCATGCAGGTTTTGCAGA+TGG + chr3_3:72561530-72561549 Msa0470480:intron 40.0%
TGCTCGTGTTTGAACATCTA+TGG - chr3_3:72561701-72561720 None:intergenic 40.0%
TGGTTTCATTTGCATTGCTC+AGG + chr3_3:72561955-72561974 Msa0470480:intron 40.0%
AGCACTCTAGTTGTAGTGAA+GGG - chr3_3:72561982-72562001 None:intergenic 40.0%
AAGCACTCTAGTTGTAGTGA+AGG - chr3_3:72561983-72562002 None:intergenic 40.0%
TATCGCCGAATTATCTCTGT+TGG + chr3_3:72562012-72562031 Msa0470480:CDS 40.0%
GAAGAAGCTGCTATAAGTGA+TGG - chr3_3:72562061-72562080 None:intergenic 40.0%
! AGCAGCTTCTTCAATTTTCC+TGG + chr3_3:72562069-72562088 Msa0470480:CDS 40.0%
! GGAAAAGCATATATTTGGCC+AGG - chr3_3:72562090-72562109 None:intergenic 40.0%
! TTTTCCCTGCAATGAAACCA+TGG + chr3_3:72562104-72562123 Msa0470480:CDS 40.0%
TTTCCCTGCAATGAAACCAT+GGG + chr3_3:72562105-72562124 Msa0470480:CDS 40.0%
ATACCCATGGTTTCATTGCA+GGG - chr3_3:72562111-72562130 None:intergenic 40.0%
CAACCAAGCATGTTAAGCAA+AGG - chr3_3:72562193-72562212 None:intergenic 40.0%
TGAGTGTAATGCTGCAATGT+CGG - chr3_3:72562234-72562253 None:intergenic 40.0%
AAGCATACAAATCAGAAGGC+TGG - chr3_3:72562260-72562279 None:intergenic 40.0%
TAGGACTGTTGCAACAAAGA+CGG - chr3_3:72562299-72562318 None:intergenic 40.0%
GGAGAAATACAATCAGCACA+AGG + chr3_3:72562341-72562360 Msa0470480:CDS 40.0%
TTGAATGTCCAATTCCCAGT+TGG + chr3_3:72562526-72562545 Msa0470480:three_prime_UTR 40.0%
! AAAGCGTTAGATCGACACAA+AGG + chr3_3:72562549-72562568 Msa0470480:three_prime_UTR 40.0%
AAGCGTTAGATCGACACAAA+GGG + chr3_3:72562550-72562569 Msa0470480:three_prime_UTR 40.0%
!!! TCTTGAAGCGTCGATTTTGT+GGG - chr3_3:72562607-72562626 None:intergenic 40.0%
!!! TTCTTGAAGCGTCGATTTTG+TGG - chr3_3:72562608-72562627 None:intergenic 40.0%
ATGTGGTCTGTAAATGGTGA+TGG - chr3_3:72563089-72563108 None:intergenic 40.0%
TGCACAATGTGGTCTGTAAA+TGG - chr3_3:72563095-72563114 None:intergenic 40.0%
ATATATTTGGGTGACCAAGC+AGG + chr3_3:72563220-72563239 Msa0470480:three_prime_UTR 40.0%
TATATTTGGGTGACCAAGCA+GGG + chr3_3:72563221-72563240 Msa0470480:three_prime_UTR 40.0%
TGAAATATTCACCGTGAGGT+TGG - chr3_3:72563296-72563315 None:intergenic 40.0%
ATGGTGAAATATTCACCGTG+AGG - chr3_3:72563300-72563319 None:intergenic 40.0%
CCGCATCATTATCAACCTTA+TGG - chr3_3:72563319-72563338 None:intergenic 40.0%
!! TAATGATGCGGGTTAGAGAT+AGG + chr3_3:72563328-72563347 Msa0470480:three_prime_UTR 40.0%
GTGTTTACGTCAGATTATGC+AGG - chr3_3:72563367-72563386 None:intergenic 40.0%
AACACAAGACTCTTTCCATC+GGG + chr3_3:72563382-72563401 Msa0470480:three_prime_UTR 40.0%
TTTCCATCGGGGCTAAAATA+TGG + chr3_3:72563394-72563413 Msa0470480:three_prime_UTR 40.0%
TGATTCAAAGTGGTTCAGGT+GGG - chr3_3:72563432-72563451 None:intergenic 40.0%
TTGAATCAGTTTCCTCAACC+CGG + chr3_3:72563444-72563463 Msa0470480:three_prime_UTR 40.0%
GGGCTTAAGAGATTAACAGA+GGG - chr3_3:72563589-72563608 None:intergenic 40.0%
!! TACATAATGGATGCCGTTCA+CGG - chr3_3:72563622-72563641 None:intergenic 40.0%
GAAATTTCGGTCAACATCGA+TGG + chr3_3:72563747-72563766 Msa0470480:three_prime_UTR 40.0%
TTCCTAATCTGACTCTCTTC+CGG - chr3_3:72563990-72564009 None:intergenic 40.0%
GAAGAGAGTCAGATTAGGAA+CGG + chr3_3:72563990-72564009 Msa0470480:three_prime_UTR 40.0%
AAGAGAGTCAGATTAGGAAC+GGG + chr3_3:72563991-72564010 Msa0470480:three_prime_UTR 40.0%
GTTGAATCAGGCGAGATAAA+CGG + chr3_3:72564090-72564109 Msa0470480:three_prime_UTR 40.0%
TTGAATCAGGCGAGATAAAC+GGG + chr3_3:72564091-72564110 Msa0470480:three_prime_UTR 40.0%
CCTGGTTAGCAATGAATTCA+AGG - chr3_3:72564157-72564176 None:intergenic 40.0%
CCTTGAATTCATTGCTAACC+AGG + chr3_3:72564154-72564173 Msa0470480:three_prime_UTR 40.0%
!! GCGATGAATTTGTTGTTTCC+AGG + chr3_3:72564228-72564247 Msa0470480:three_prime_UTR 40.0%
TACAAAATAGTTGAGCACGG+TGG - chr3_3:72564417-72564436 None:intergenic 40.0%
CGGTACAAAATAGTTGAGCA+CGG - chr3_3:72564420-72564439 None:intergenic 40.0%
! CGTGCTCAACTATTTTGTAC+CGG + chr3_3:72564418-72564437 Msa0470480:three_prime_UTR 40.0%
TATTCCACCCATCTCAAATC+GGG - chr3_3:72564609-72564628 None:intergenic 40.0%
CTATTCCACCCATCTCAAAT+CGG - chr3_3:72564610-72564629 None:intergenic 40.0%
! TTTGAGATGGGTGGAATAGA+CGG + chr3_3:72564611-72564630 Msa0470480:three_prime_UTR 40.0%
! TGTGTTTCTGTGAGGTGATT+AGG + chr3_3:72564741-72564760 Msa0470480:three_prime_UTR 40.0%
!!! CTCAAGTGCTGATCTTCTTT+TGG + chr3_3:72564809-72564828 Msa0470480:three_prime_UTR 40.0%
!!! AAGTGCTGATCTTCTTTTGG+TGG + chr3_3:72564812-72564831 Msa0470480:three_prime_UTR 40.0%
!! TTTGGTGGTGGTTGTGTAAA+CGG + chr3_3:72564827-72564846 Msa0470480:three_prime_UTR 40.0%
GTTTACGTTACTGAGAGAAC+CGG - chr3_3:72564876-72564895 None:intergenic 40.0%
GAATTGGCCGTTGAAATTGA+CGG + chr3_3:72564947-72564966 Msa0470480:three_prime_UTR 40.0%
CGTCAGTGAGTTGTAATTCT+TGG + chr3_3:72564976-72564995 Msa0470480:three_prime_UTR 40.0%
GTGAGTTGTAATTCTTGGTG+AGG + chr3_3:72564981-72565000 Msa0470480:three_prime_UTR 40.0%
TATAGTATGTGTGGATGGAG+AGG + chr3_3:72565176-72565195 Msa0470480:three_prime_UTR 40.0%
ACACGCCCTAATACTAATTC+AGG + chr3_3:72565320-72565339 Msa0470480:three_prime_UTR 40.0%
! ATTGTGCTTTTGATGAGGGG+GGG - chr3_3:72559191-72559210 None:intergenic 45.0%
GATGTTAAAGCGGTAACAGG+TGG - chr3_3:72559469-72559488 None:intergenic 45.0%
TGATTGGTGAGGTTAGTGAG+CGG - chr3_3:72559541-72559560 None:intergenic 45.0%
CCGCAACAATTCATCCACTT+TGG + chr3_3:72559570-72559589 Msa0470480:CDS 45.0%
TCCCACTACCTTCAATGTTC+CGG + chr3_3:72559921-72559940 Msa0470480:CDS 45.0%
ACCGGAACATTGAAGGTAGT+GGG - chr3_3:72559925-72559944 None:intergenic 45.0%
AACCGGAACATTGAAGGTAG+TGG - chr3_3:72559926-72559945 None:intergenic 45.0%
ACTCGAAACCGGAACATTGA+AGG - chr3_3:72559932-72559951 None:intergenic 45.0%
! TGTTCCGGTTTCGAGTAGTA+TGG + chr3_3:72559936-72559955 Msa0470480:CDS 45.0%
TCATCTCCTGGTAAATCCGA+TGG + chr3_3:72559964-72559983 Msa0470480:CDS 45.0%
GACATTCCATCGGATTTACC+AGG - chr3_3:72559973-72559992 None:intergenic 45.0%
!! CGATGGAATGTCGGTTTCTA+TGG + chr3_3:72559981-72560000 Msa0470480:CDS 45.0%
!! GTTTAACCCTCCGTTTTTCG+AGG + chr3_3:72560604-72560623 Msa0470480:intron 45.0%
CAATTTCCCTCGAAAAACGG+AGG - chr3_3:72560614-72560633 None:intergenic 45.0%
!!! CTCCGTTTTTCGAGGGAAAT+TGG + chr3_3:72560612-72560631 Msa0470480:intron 45.0%
GAAGTCTGATTGCTCTAGCT+AGG + chr3_3:72560641-72560660 Msa0470480:intron 45.0%
AAGGCCTTCAACAGACTTCA+TGG + chr3_3:72560888-72560907 Msa0470480:CDS 45.0%
! TTTCTGGGAATCCGATGAAC+AGG + chr3_3:72561224-72561243 Msa0470480:CDS 45.0%
AGATTTGTACGTGCAGCTCA+AGG + chr3_3:72561618-72561637 Msa0470480:CDS 45.0%
TGCAGCTCAAGGAATTGATG+AGG + chr3_3:72561629-72561648 Msa0470480:CDS 45.0%
CATACCCATGGTTTCATTGC+AGG - chr3_3:72562112-72562131 None:intergenic 45.0%
ATCAACTCTCTGCTCAGTTC+TGG - chr3_3:72562499-72562518 None:intergenic 45.0%
AACGCTTTCCAACTGGGAAT+TGG - chr3_3:72562537-72562556 None:intergenic 45.0%
CGATCTAACGCTTTCCAACT+GGG - chr3_3:72562543-72562562 None:intergenic 45.0%
TCGATCTAACGCTTTCCAAC+TGG - chr3_3:72562544-72562563 None:intergenic 45.0%
TGCTTCTTCTGCACCATTAG+TGG + chr3_3:72562649-72562668 Msa0470480:three_prime_UTR 45.0%
TCTTCTGCACCATTAGTGGA+TGG + chr3_3:72562653-72562672 Msa0470480:three_prime_UTR 45.0%
GTGAGTAAGCATGACAGACT+CGG + chr3_3:72562770-72562789 Msa0470480:three_prime_UTR 45.0%
TGAGTAAGCATGACAGACTC+GGG + chr3_3:72562771-72562790 Msa0470480:three_prime_UTR 45.0%
TTGGCATGTTGTTGAGCCAA+TGG + chr3_3:72563140-72563159 Msa0470480:three_prime_UTR 45.0%
GAACAATAAGGTCCACCCTT+AGG + chr3_3:72563175-72563194 Msa0470480:three_prime_UTR 45.0%
GTGAATGTTGAGAGGCCTAA+GGG - chr3_3:72563193-72563212 None:intergenic 45.0%
TGTGAATGTTGAGAGGCCTA+AGG - chr3_3:72563194-72563213 None:intergenic 45.0%
TTAGGCCTCTCAACATTCAC+AGG + chr3_3:72563193-72563212 Msa0470480:three_prime_UTR 45.0%
TCAAGCCTGTGAATGTTGAG+AGG - chr3_3:72563201-72563220 None:intergenic 45.0%
ATATTTGGGTGACCAAGCAG+GGG + chr3_3:72563222-72563241 Msa0470480:three_prime_UTR 45.0%
ATATTCACCGTGAGGTTGGA+TGG - chr3_3:72563292-72563311 None:intergenic 45.0%
ACACAAGACTCTTTCCATCG+GGG + chr3_3:72563383-72563402 Msa0470480:three_prime_UTR 45.0%
!!! CATCCATATTTTAGCCCCGA+TGG - chr3_3:72563400-72563419 None:intergenic 45.0%
CTGATTCAAAGTGGTTCAGG+TGG - chr3_3:72563433-72563452 None:intergenic 45.0%
ATCTCAAAGCTTCCACTTCC+CGG + chr3_3:72563490-72563509 Msa0470480:three_prime_UTR 45.0%
AAAGCGATCCATTCTCCATC+AGG + chr3_3:72563532-72563551 Msa0470480:three_prime_UTR 45.0%
AAGCGATCCATTCTCCATCA+GGG + chr3_3:72563533-72563552 Msa0470480:three_prime_UTR 45.0%
TTGCACATTGTATCCGACCA+TGG + chr3_3:72563562-72563581 Msa0470480:three_prime_UTR 45.0%
ATTAACAGAGGGTCCATGGT+CGG - chr3_3:72563578-72563597 None:intergenic 45.0%
AGAGATTAACAGAGGGTCCA+TGG - chr3_3:72563582-72563601 None:intergenic 45.0%
CGGGCTTAAGAGATTAACAG+AGG - chr3_3:72563590-72563609 None:intergenic 45.0%
TATGACCTGATCGACCAGAA+CGG + chr3_3:72563650-72563669 Msa0470480:three_prime_UTR 45.0%
TTTCGTCAAGAAGTTGACCC+TGG - chr3_3:72563731-72563750 None:intergenic 45.0%
!! CTTTGCTTCAGAAAGCACTG+AGG - chr3_3:72563785-72563804 None:intergenic 45.0%
!! CTCAGTGCTTTCTGAAGCAA+AGG + chr3_3:72563783-72563802 Msa0470480:three_prime_UTR 45.0%
GGTGTAATCTACACAGCAGT+TGG - chr3_3:72563814-72563833 None:intergenic 45.0%
ACTGCTGTGTAGATTACACC+AGG + chr3_3:72563814-72563833 Msa0470480:three_prime_UTR 45.0%
AATGGCTTTCTCAACCGCAT+GGG - chr3_3:72563851-72563870 None:intergenic 45.0%
TGGTGTTTACGTAGTGAACC+GGG - chr3_3:72563905-72563924 None:intergenic 45.0%
CTGGTGTTTACGTAGTGAAC+CGG - chr3_3:72563906-72563925 None:intergenic 45.0%
ATCGCTTACGTTGAAATGCC+TGG - chr3_3:72563925-72563944 None:intergenic 45.0%
TAAGCGATTCTGTCTCCAGA+GGG + chr3_3:72563937-72563956 Msa0470480:three_prime_UTR 45.0%
TGAGAAAACCGGAAACGAAC+CGG + chr3_3:72563960-72563979 Msa0470480:three_prime_UTR 45.0%
AACCGGAAGAGAGTCAGATT+AGG + chr3_3:72563985-72564004 Msa0470480:three_prime_UTR 45.0%
AGAGAGTCAGATTAGGAACG+GGG + chr3_3:72563992-72564011 Msa0470480:three_prime_UTR 45.0%
CTCTAGCATAAACTGAGGAC+TGG + chr3_3:72564026-72564045 Msa0470480:three_prime_UTR 45.0%
TTATCTCGCCTGATTCAACG+CGG - chr3_3:72564089-72564108 None:intergenic 45.0%
TCACATCGAATTGTTCGACC+TGG - chr3_3:72564175-72564194 None:intergenic 45.0%
GGTCGAACAATTCGATGTGA+CGG + chr3_3:72564175-72564194 Msa0470480:three_prime_UTR 45.0%
TTGTTTCCAGGTGAAGTTGC+CGG + chr3_3:72564240-72564259 Msa0470480:three_prime_UTR 45.0%
! TACGTTTTCCTCACTCACGA+CGG - chr3_3:72564450-72564469 None:intergenic 45.0%
! TATGGTGGTAAAGGTTGGTC+CGG - chr3_3:72564501-72564520 None:intergenic 45.0%
CTTCCTATGGTGGTAAAGGT+TGG - chr3_3:72564506-72564525 None:intergenic 45.0%
CTGTATCTCCTACCGGAAAA+TGG - chr3_3:72564539-72564558 None:intergenic 45.0%
! TTTTCCGGTAGGAGATACAG+CGG + chr3_3:72564539-72564558 Msa0470480:three_prime_UTR 45.0%
! GGTGTTACCCGATTTGAGAT+GGG + chr3_3:72564599-72564618 Msa0470480:three_prime_UTR 45.0%
GATTAAATACTCACCGTCGC+TGG + chr3_3:72564683-72564702 Msa0470480:three_prime_UTR 45.0%
! GTTGAGACTGTGTTTCTGTG+AGG + chr3_3:72564733-72564752 Msa0470480:three_prime_UTR 45.0%
! TGCTGATCTTCTTTTGGTGG+TGG + chr3_3:72564815-72564834 Msa0470480:three_prime_UTR 45.0%
GTAAACGGCGTCGTAGTATA+TGG + chr3_3:72564842-72564861 Msa0470480:three_prime_UTR 45.0%
GTAACGTAAACGAGTTGCAG+AGG + chr3_3:72564885-72564904 Msa0470480:three_prime_UTR 45.0%
AGGTGGATCTTGGTGAGTAA+TGG + chr3_3:72564908-72564927 Msa0470480:three_prime_UTR 45.0%
GGACACTCCGTCAATTTCAA+CGG - chr3_3:72564957-72564976 None:intergenic 45.0%
TCTTGGTGAGGGTGATGAAT+TGG + chr3_3:72564993-72565012 Msa0470480:three_prime_UTR 45.0%
CTTGGTGAGGGTGATGAATT+GGG + chr3_3:72564994-72565013 Msa0470480:three_prime_UTR 45.0%
AGCATCATCTTCACCACACT+TGG - chr3_3:72565053-72565072 None:intergenic 45.0%
ACTTCAACTGCCCTTAGCAA+GGG + chr3_3:72565092-72565111 Msa0470480:three_prime_UTR 45.0%
GACAAGGACAATCAATGGCT+TGG - chr3_3:72565270-72565289 None:intergenic 45.0%
! AGAGGCGGCTAAGACTTTTC+CGG - chr3_3:72559503-72559522 None:intergenic 50.0%
AGTTGTTCCTCCTCCTCCAT+TGG + chr3_3:72559894-72559913 Msa0470480:CDS 50.0%
!! AAGGTAGTGGGAGCAACCAA+TGG - chr3_3:72559913-72559932 None:intergenic 50.0%
GCAAAGGTAGCACAGAGTTG+AGG - chr3_3:72560340-72560359 None:intergenic 50.0%
CAAGCATCTACGTGCATCTG+AGG + chr3_3:72560372-72560391 Msa0470480:CDS 50.0%
TGAGGAGATTTGTGCACCTC+AGG + chr3_3:72561386-72561405 Msa0470480:CDS 50.0%
CGTCATTAGCAGCATACCCA+TGG - chr3_3:72562124-72562143 None:intergenic 50.0%
GACTGTTGCAACAAAGACGG+TGG - chr3_3:72562296-72562315 None:intergenic 50.0%
TGAAGGAGGGCAGTACTTCT+TGG - chr3_3:72562459-72562478 None:intergenic 50.0%
!!! TGAAGCGTCGATTTTGTGGG+CGG - chr3_3:72562604-72562623 None:intergenic 50.0%
TCTAGCCAGCCATCCACTAA+TGG - chr3_3:72562665-72562684 None:intergenic 50.0%
GAGTAAGCATGACAGACTCG+GGG + chr3_3:72562772-72562791 Msa0470480:three_prime_UTR 50.0%
ACAGGGCTACATGCACAATG+TGG - chr3_3:72563106-72563125 None:intergenic 50.0%
AATGTTGAGAGGCCTAAGGG+TGG - chr3_3:72563190-72563209 None:intergenic 50.0%
ATGAAGATGGAACCCCTGCT+TGG - chr3_3:72563237-72563256 None:intergenic 50.0%
ACCTGAACCATCCAACCTCA+CGG + chr3_3:72563282-72563301 Msa0470480:three_prime_UTR 50.0%
TTCAAAGTGGTTCAGGTGGG+AGG - chr3_3:72563429-72563448 None:intergenic 50.0%
TTCCTCAACCCGGTTCCATT+CGG + chr3_3:72563454-72563473 Msa0470480:three_prime_UTR 50.0%
TTGATCCACCCGAATGGAAC+CGG - chr3_3:72563466-72563485 None:intergenic 50.0%
TCTCAAAGCTTCCACTTCCC+GGG + chr3_3:72563491-72563510 Msa0470480:three_prime_UTR 50.0%
AGCGATCCATTCTCCATCAG+GGG + chr3_3:72563534-72563553 Msa0470480:three_prime_UTR 50.0%
GGTCGGATACAATGTGCAAC+TGG - chr3_3:72563561-72563580 None:intergenic 50.0%
CCGTTCACGGAGAGAAAAAC+GGG - chr3_3:72563609-72563628 None:intergenic 50.0%
!! CCCGTTTTTCTCTCCGTGAA+CGG + chr3_3:72563606-72563625 Msa0470480:three_prime_UTR 50.0%
GCCGTTCACGGAGAGAAAAA+CGG - chr3_3:72563610-72563629 None:intergenic 50.0%
! GTTTTCCGTTCTGGTCGATC+AGG - chr3_3:72563658-72563677 None:intergenic 50.0%
! ATCCATTTTCCGTCTGGCGA+TGG + chr3_3:72563679-72563698 Msa0470480:three_prime_UTR 50.0%
! AGGCATTGTTCTTTCCGTCC+AGG + chr3_3:72563710-72563729 Msa0470480:three_prime_UTR 50.0%
GGCATTGTTCTTTCCGTCCA+GGG + chr3_3:72563711-72563730 Msa0470480:three_prime_UTR 50.0%
GTCAAGAAGTTGACCCTGGA+CGG - chr3_3:72563727-72563746 None:intergenic 50.0%
AGATTACACCAGGTCGAACC+CGG + chr3_3:72563824-72563843 Msa0470480:three_prime_UTR 50.0%
CAATGGCTTTCTCAACCGCA+TGG - chr3_3:72563852-72563871 None:intergenic 50.0%
GGACGGTTCGAACCGAAAAA+AGG - chr3_3:72563884-72563903 None:intergenic 50.0%
!! TTTTTCGGTTCGAACCGTCC+CGG + chr3_3:72563884-72563903 Msa0470480:three_prime_UTR 50.0%
GTTTACGTAGTGAACCGGGA+CGG - chr3_3:72563901-72563920 None:intergenic 50.0%
CGGTTCACTACGTAAACACC+AGG + chr3_3:72563904-72563923 Msa0470480:three_prime_UTR 50.0%
GTAAGCGATTCTGTCTCCAG+AGG + chr3_3:72563936-72563955 Msa0470480:three_prime_UTR 50.0%
TCTCCAGAGGGTGAGAAAAC+CGG + chr3_3:72563949-72563968 Msa0470480:three_prime_UTR 50.0%
! TTTCCGGTTTTCTCACCCTC+TGG - chr3_3:72563955-72563974 None:intergenic 50.0%
TATCTCGCCTGATTCAACGC+GGG - chr3_3:72564088-72564107 None:intergenic 50.0%
!! GCGAGATAAACGGGTTGAGA+TGG + chr3_3:72564100-72564119 Msa0470480:three_prime_UTR 50.0%
GGGTTGAGATGGTGAGCATT+GGG + chr3_3:72564111-72564130 Msa0470480:three_prime_UTR 50.0%
TTTACACCGGCAACTTCACC+TGG - chr3_3:72564249-72564268 None:intergenic 50.0%
GGGTTTACACGCGTTTACAC+CGG - chr3_3:72564262-72564281 None:intergenic 50.0%
GGTGTAAACGCGTGTAAACC+CGG + chr3_3:72564261-72564280 Msa0470480:three_prime_UTR 50.0%
ATCGAACGAGTTACACCACC+GGG - chr3_3:72564282-72564301 None:intergenic 50.0%
CATCGAACGAGTTACACCAC+CGG - chr3_3:72564283-72564302 None:intergenic 50.0%
TTTCATCGGAGAGGGAACGA+CGG - chr3_3:72564360-72564379 None:intergenic 50.0%
AAATAGTTGAGCACGGTGGC+TGG - chr3_3:72564413-72564432 None:intergenic 50.0%
AGTGAGATCCTCTACTTCGC+CGG + chr3_3:72564479-72564498 Msa0470480:three_prime_UTR 50.0%
GGACCAACCTTTACCACCAT+AGG + chr3_3:72564500-72564519 Msa0470480:three_prime_UTR 50.0%
GTCGCTTCCTATGGTGGTAA+AGG - chr3_3:72564510-72564529 None:intergenic 50.0%
! AGCGACTGCAGTCCATTTTC+CGG + chr3_3:72564524-72564543 Msa0470480:three_prime_UTR 50.0%
! ACTGCAGTCCATTTTCCGGT+AGG + chr3_3:72564528-72564547 Msa0470480:three_prime_UTR 50.0%
TTTCCGGTAGGAGATACAGC+GGG + chr3_3:72564540-72564559 Msa0470480:three_prime_UTR 50.0%
! GGGTGTTACCCGATTTGAGA+TGG + chr3_3:72564598-72564617 Msa0470480:three_prime_UTR 50.0%
! GTTACCCGATTTGAGATGGG+TGG + chr3_3:72564602-72564621 Msa0470480:three_prime_UTR 50.0%
AATCTACGTGTCAACGCACG+AGG - chr3_3:72564667-72564686 None:intergenic 50.0%
AAACCAAGTGTCACCAGCGA+CGG - chr3_3:72564699-72564718 None:intergenic 50.0%
GTGAGGTGATTAGGCAACAG+AGG + chr3_3:72564750-72564769 Msa0470480:three_prime_UTR 50.0%
ACGGCGTCGTAGTATATGGT+TGG + chr3_3:72564846-72564865 Msa0470480:three_prime_UTR 50.0%
ACGTAAACGAGTTGCAGAGG+AGG + chr3_3:72564888-72564907 Msa0470480:three_prime_UTR 50.0%
TAAACGAGTTGCAGAGGAGG+TGG + chr3_3:72564891-72564910 Msa0470480:three_prime_UTR 50.0%
GTGAGGGTGATGAATTGGGA+GGG + chr3_3:72564998-72565017 Msa0470480:three_prime_UTR 50.0%
!! GTAGTTAGCTCTGCCAAGTG+TGG + chr3_3:72565037-72565056 Msa0470480:three_prime_UTR 50.0%
GAAGATGATGCTATCGCTGC+TGG + chr3_3:72565061-72565080 Msa0470480:three_prime_UTR 50.0%
CTTGCTAAGGGCAGTTGAAG+TGG - chr3_3:72565093-72565112 None:intergenic 50.0%
CACTTCAACTGCCCTTAGCA+AGG + chr3_3:72565091-72565110 Msa0470480:three_prime_UTR 50.0%
TATGTGTGGATGGAGAGGAG+AGG + chr3_3:72565181-72565200 Msa0470480:three_prime_UTR 50.0%
TTGATGAGGGGGGGAAGTGA+AGG - chr3_3:72559182-72559201 None:intergenic 55.0%
TTGGTGAGGTTAGTGAGCGG+AGG - chr3_3:72559538-72559557 None:intergenic 55.0%
! GTAGTGGGAGCAACCAATGG+AGG - chr3_3:72559910-72559929 None:intergenic 55.0%
ACTCTTCAGCCACCTGCAGT+TGG - chr3_3:72561150-72561169 None:intergenic 55.0%
GGAGATTTGTGCACCTCAGG+TGG + chr3_3:72561389-72561408 Msa0470480:CDS 55.0%
GATTTGTGCACCTCAGGTGG+AGG + chr3_3:72561392-72561411 Msa0470480:CDS 55.0%
! CTGCACCATTAGTGGATGGC+TGG + chr3_3:72562657-72562676 Msa0470480:three_prime_UTR 55.0%
ACCGTGAGGTTGGATGGTTC+AGG - chr3_3:72563286-72563305 None:intergenic 55.0%
TCCTCAACCCGGTTCCATTC+GGG + chr3_3:72563455-72563474 Msa0470480:three_prime_UTR 55.0%
TGATCCACCCGAATGGAACC+GGG - chr3_3:72563465-72563484 None:intergenic 55.0%
ACTTCCCGGGTCATGACGAT+CGG + chr3_3:72563504-72563523 Msa0470480:three_prime_UTR 55.0%
TGCATCCGATCGTCATGACC+CGG - chr3_3:72563512-72563531 None:intergenic 55.0%
ACTGGTCCCCTGATGGAGAA+TGG - chr3_3:72563543-72563562 None:intergenic 55.0%
ATGTGCAACTGGTCCCCTGA+TGG - chr3_3:72563550-72563569 None:intergenic 55.0%
CACCATCGCCAGACGGAAAA+TGG - chr3_3:72563684-72563703 None:intergenic 55.0%
TTTCCGTCTGGCGATGGTGA+CGG + chr3_3:72563685-72563704 Msa0470480:three_prime_UTR 55.0%
TTTCCGTCACCATCGCCAGA+CGG - chr3_3:72563691-72563710 None:intergenic 55.0%
TTTCTCAACCGCATGGGACC+GGG - chr3_3:72563845-72563864 None:intergenic 55.0%
CTTTCTCAACCGCATGGGAC+CGG - chr3_3:72563846-72563865 None:intergenic 55.0%
CTGACTCTCTTCCGGTTCAC+CGG - chr3_3:72563982-72564001 None:intergenic 55.0%
GTCGGGTATCACAAGTGCAG+AGG - chr3_3:72564066-72564085 None:intergenic 55.0%
! CGGGTTGAGATGGTGAGCAT+TGG + chr3_3:72564110-72564129 Msa0470480:three_prime_UTR 55.0%
! ATGTGACGGAAGCTAGAGCC+AGG + chr3_3:72564189-72564208 Msa0470480:three_prime_UTR 55.0%
GTAAACGCGTGTAAACCCGG+TGG + chr3_3:72564264-72564283 Msa0470480:three_prime_UTR 55.0%
TCACTCACGACGGAACTCAC+CGG - chr3_3:72564440-72564459 None:intergenic 55.0%
ACTGCAGTCGCTTCCTATGG+TGG - chr3_3:72564516-72564535 None:intergenic 55.0%
TGGACTGCAGTCGCTTCCTA+TGG - chr3_3:72564519-72564538 None:intergenic 55.0%
TTCCGGTAGGAGATACAGCG+GGG + chr3_3:72564541-72564560 Msa0470480:three_prime_UTR 55.0%
CTGAAATCAGCGACGCCGTA+GGG + chr3_3:72564564-72564583 Msa0470480:three_prime_UTR 55.0%
ACCCGAAGACTCACTCCCTA+CGG - chr3_3:72564582-72564601 None:intergenic 55.0%
GTTGCAGAGGAGGTGGATCT+TGG + chr3_3:72564898-72564917 Msa0470480:three_prime_UTR 55.0%
GGTGAGGGTGATGAATTGGG+AGG + chr3_3:72564997-72565016 Msa0470480:three_prime_UTR 55.0%
ATGCATAGCGCTGTTGCTGC+TGG - chr3_3:72565123-72565142 None:intergenic 55.0%
AGGTCGCTTCTTGGCAGAGG+CGG - chr3_3:72559518-72559537 None:intergenic 60.0%
AGTGAGCGGAGGTCGCTTCT+TGG - chr3_3:72559527-72559546 None:intergenic 60.0%
GGAGCAACCAATGGAGGAGG+AGG - chr3_3:72559904-72559923 None:intergenic 60.0%
GTGGGAGCAACCAATGGAGG+AGG - chr3_3:72559907-72559926 None:intergenic 60.0%
ACCCGAATGGAACCGGGTTG+AGG - chr3_3:72563459-72563478 None:intergenic 60.0%
TCAACCCGGTTCCATTCGGG+TGG + chr3_3:72563458-72563477 Msa0470480:three_prime_UTR 60.0%
GATCGTCATGACCCGGGAAG+TGG - chr3_3:72563505-72563524 None:intergenic 60.0%
GCATCCGATCGTCATGACCC+GGG - chr3_3:72563511-72563530 None:intergenic 60.0%
!! GTCTGGCGATGGTGACGGAA+AGG + chr3_3:72563690-72563709 Msa0470480:three_prime_UTR 60.0%
!! CCGGTTCACCGGTTCGTTTC+CGG - chr3_3:72563971-72563990 None:intergenic 60.0%
CCGGAAACGAACCGGTGAAC+CGG + chr3_3:72563968-72563987 Msa0470480:three_prime_UTR 60.0%
TACCCGACCCGCGTTGAATC+AGG + chr3_3:72564078-72564097 Msa0470480:three_prime_UTR 60.0%
TCGCCTGATTCAACGCGGGT+CGG - chr3_3:72564084-72564103 None:intergenic 60.0%
GCCAGGTCTTCTCGTTGCGA+CGG + chr3_3:72564206-72564225 Msa0470480:three_prime_UTR 60.0%
ATCGGAGAGGGAACGACGGT+TGG - chr3_3:72564356-72564375 None:intergenic 60.0%
GTGCGATCGTCCACCCAACT+TGG + chr3_3:72564387-72564406 Msa0470480:three_prime_UTR 60.0%
GGTGAGTTCCGTCGTGAGTG+AGG + chr3_3:72564439-72564458 Msa0470480:three_prime_UTR 60.0%
! AGGTTGGTCCGGCGAAGTAG+AGG - chr3_3:72564490-72564509 None:intergenic 60.0%
AGCCCCGCTGTATCTCCTAC+CGG - chr3_3:72564546-72564565 None:intergenic 60.0%
GCTGAAATCAGCGACGCCGT+AGG + chr3_3:72564563-72564582 Msa0470480:three_prime_UTR 60.0%
CGCCGTAGGGAGTGAGTCTT+CGG + chr3_3:72564577-72564596 Msa0470480:three_prime_UTR 60.0%
GCCGTAGGGAGTGAGTCTTC+GGG + chr3_3:72564578-72564597 Msa0470480:three_prime_UTR 60.0%
CCAGCTGACACGTGGTACAC+CGG + chr3_3:72564638-72564657 Msa0470480:three_prime_UTR 60.0%
CAGCTGACACGTGGTACACC+GGG + chr3_3:72564639-72564658 Msa0470480:three_prime_UTR 60.0%
GTGTCAACGCACGAGGATCC+CGG - chr3_3:72564660-72564679 None:intergenic 60.0%
TCACCGTCGCTGGTGACACT+TGG + chr3_3:72564693-72564712 Msa0470480:three_prime_UTR 60.0%
GCTGGCGTTGCCCTTGCTAA+GGG - chr3_3:72565105-72565124 None:intergenic 60.0%
TGCTGGCGTTGCCCTTGCTA+AGG - chr3_3:72565106-72565125 None:intergenic 60.0%
CGGAGGTCGCTTCTTGGCAG+AGG - chr3_3:72559521-72559540 None:intergenic 65.0%
AGGTCGAACCCGGTCCCATG+CGG + chr3_3:72563834-72563853 Msa0470480:three_prime_UTR 65.0%
CGCCTGATTCAACGCGGGTC+GGG - chr3_3:72564083-72564102 None:intergenic 65.0%
GCCGTCGCAACGAGAAGACC+TGG - chr3_3:72564210-72564229 None:intergenic 65.0%
! GCACGGTGGCTGGCCAAGTT+GGG - chr3_3:72564403-72564422 None:intergenic 65.0%
! AGCACGGTGGCTGGCCAAGT+TGG - chr3_3:72564404-72564423 None:intergenic 65.0%
ACGGCAGTCCAGCTGACACG+TGG + chr3_3:72564630-72564649 Msa0470480:three_prime_UTR 65.0%
CCGGTGTACCACGTGTCAGC+TGG - chr3_3:72564641-72564660 None:intergenic 65.0%
GCATGGGACCGGGTTCGACC+TGG - chr3_3:72563835-72563854 None:intergenic 70.0%
! CGGTGGCTGGCCAAGTTGGG+TGG - chr3_3:72564400-72564419 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 72559173 72565357 72559173 ID=Msa0470480;Name=Msa0470480
chr3_3 mRNA 72559173 72565357 72559173 ID=Msa0470480-mRNA-1;Parent=Msa0470480;Name=Msa0470480-mRNA-1;_AED=0.07;_eAED=0.07;_QI=224|1|1|1|1|1|10|2852|502
chr3_3 exon 72559173 72559591 72559173 ID=Msa0470480-mRNA-1:exon:18121;Parent=Msa0470480-mRNA-1
chr3_3 exon 72559727 72560141 72559727 ID=Msa0470480-mRNA-1:exon:18122;Parent=Msa0470480-mRNA-1
chr3_3 exon 72560257 72560393 72560257 ID=Msa0470480-mRNA-1:exon:18123;Parent=Msa0470480-mRNA-1
chr3_3 exon 72560880 72560972 72560880 ID=Msa0470480-mRNA-1:exon:18124;Parent=Msa0470480-mRNA-1
chr3_3 exon 72561157 72561290 72561157 ID=Msa0470480-mRNA-1:exon:18125;Parent=Msa0470480-mRNA-1
chr3_3 exon 72561380 72561455 72561380 ID=Msa0470480-mRNA-1:exon:18126;Parent=Msa0470480-mRNA-1
chr3_3 exon 72561540 72561650 72561540 ID=Msa0470480-mRNA-1:exon:18127;Parent=Msa0470480-mRNA-1
chr3_3 exon 72561977 72562126 72561977 ID=Msa0470480-mRNA-1:exon:18128;Parent=Msa0470480-mRNA-1
chr3_3 exon 72562228 72562362 72562228 ID=Msa0470480-mRNA-1:exon:18129;Parent=Msa0470480-mRNA-1
chr3_3 exon 72562443 72565357 72562443 ID=Msa0470480-mRNA-1:exon:18130;Parent=Msa0470480-mRNA-1
chr3_3 five_prime_UTR 72559173 72559396 72559173 ID=Msa0470480-mRNA-1:five_prime_utr;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72559397 72559591 72559397 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72559727 72560141 72559727 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72560257 72560393 72560257 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72560880 72560972 72560880 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72561157 72561290 72561157 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72561380 72561455 72561380 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72561540 72561650 72561540 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72561977 72562126 72561977 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72562228 72562362 72562228 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 CDS 72562443 72562505 72562443 ID=Msa0470480-mRNA-1:cds;Parent=Msa0470480-mRNA-1
chr3_3 three_prime_UTR 72562506 72565357 72562506 ID=Msa0470480-mRNA-1:three_prime_utr;Parent=Msa0470480-mRNA-1
Gene Sequence

>Msa0470480

ATGTCAAATCATAATAATCGTCGTTCATCGTTTTCTTCTTCAACAACGTCGTCAATGGCAAAACGACACCCACCTGTTACCGCTTTAACATCAGAGAACAACGCCGGAAAAGTCTTAGCCGCCTCTGCCAAGAAGCGACCTCCGCTCACTAACCTCACCAATCAAAATTCTTCCCGCAACAATTCATCCACTTTGGTAACTAAAGTTGCAAAGACAAAGAAAGAACCTTCACCATGCAATTCTTCTTCAAGCTCTGTGATTTCTGTTAACAAAAAACCTACTTTGTCGAATGTTAAATCCGCTACTGTGAATGTTTTTCCCAAGGCCATTACTACTACTTCATCATTTTCTGGAAGGAATGAAGTTGTTCCTCCTCCTCCATTGGTTGCTCCCACTACCTTCAATGTTCCGGTTTCGAGTAGTATGGATTTATCATCTCCTGGTAAATCCGATGGAATGTCGGTTTCTATGGACGAGACAATGTCGTCGTGTGATTCTTTCAAGAGTCCTGATATTGAATATGTGGATAACAGTGATGTTCCAGCTGTTGATTCTATTGAGAGGAAGACTTTTTGTAGCCTCAACATTTCTGATTCTAATTACCCATCAGGTAACATTTGTAGTAGAGACATTCTTGTTGAGTTGGAAAAGGGAGAGAAAATTGTTAATATTGATAATGATTACATGGATCCTCAACTCTGTGCTACCTTTGCCTGTGATATCTACAAGCATCTACGTGCATCTGAGACAAAGAAAAGGCCTTCAACAGACTTCATGGAGAAAATTCAGAAGGACATTAATCCCAGCATGCGTGCTATATTGATTGATTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCCGATACATTGTATTTGACAGTAAACTACATCGATCGATATCTTTCTGGGAATCCGATGAACAGGCAGCAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACATACTTCAAGGATGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTCTGAAATTTGAAATGACTGCACCAACAATTAAATGCTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAATTGATGAGGTCCCTTCACTACAACTAGAGTGCTTGACAAATTTTATCGCCGAATTATCTCTGTTGGAGTATAGTATGCTTTGTTATGCTCCATCACTTATAGCAGCTTCTTCAATTTTCCTGGCCAAATATATGCTTTTCCCTGCAATGAAACCATGGAATCCGACATTGCAGCATTACACTCAATACCAGCCTTCTGATTTGTATGCTTGTGTAAAGGATCTCCACCGTCTTTGTTGCAACAGTCCTAATTCTAATTTGCCTGCAATTAAGGAGAAATACAATCAGCACAAGTATAAATATGTTGCCAAGAAGTACTGCCCTCCTTCAATACCTCAAGAATTTTTCCAGAACTGA
Protein sequence

>Msa0470480

MSNHNNRRSSFSSSTTSSMAKRHPPVTALTSENNAGKVLAASAKKRPPLTNLTNQNSSRNNSSTLVTKVAKTKKEPSPCNSSSSSVISVNKKPTLSNVKSATVNVFPKAITTTSSFSGRNEVVPPPPLVAPTTFNVPVSSSMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLYACVKDLHRLCCNSPNSNLPAIKEKYNQHKYKYVAKKYCPPSIPQEFFQN*