Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526450 | XP_013447079.1 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526450 | B7FIY1 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0526450 | Msa0576990 | 0.876271 | 1.594474e-68 | -8.615850e-47 |
| Msa0526450 | Msa1085960 | 0.905065 | 6.362628e-80 | -8.615850e-47 |
| Msa0526450 | Msa1363220 | 0.870165 | 1.792888e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526450 | MtrunA17_Chr8g0387261 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526450 | AT4G23470.1 | 72.308 | 260 | 51 | 5 | 4 | 263 | 3 | 241 | 2.77e-134 | 379 |
| Msa0526450 | AT1G63830.1 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0526450 | AT1G63830.2 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0526450 | AT1G63830.3 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0526450 | AT4G23470.3 | 77.273 | 220 | 43 | 2 | 4 | 223 | 3 | 215 | 2.97e-127 | 361 |
| Msa0526450 | AT5G41390.1 | 77.778 | 216 | 47 | 1 | 3 | 218 | 4 | 218 | 1.81e-124 | 355 |
| Msa0526450 | AT1G63830.5 | 79.897 | 194 | 27 | 4 | 48 | 241 | 1 | 182 | 1.12e-104 | 301 |
| Msa0526450 | AT1G63830.4 | 81.875 | 160 | 29 | 0 | 2 | 161 | 3 | 162 | 1.61e-97 | 283 |
| Msa0526450 | AT4G23470.2 | 71.845 | 206 | 37 | 5 | 58 | 263 | 1 | 185 | 2.77e-97 | 283 |
| Msa0526450 | AT5G41390.2 | 80.124 | 161 | 31 | 1 | 58 | 218 | 1 | 160 | 1.18e-91 | 270 |
| Msa0526450 | AT4G23470.4 | 78.313 | 166 | 29 | 2 | 58 | 223 | 1 | 159 | 1.90e-90 | 265 |
Find 131 sgRNAs with CRISPR-Local
Find 504 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTATTGCACATATTTCT+TGG | 0.218807 | 3_4:-80305322 | None:intergenic |
| AGACACCTATTGATTGTTTC+AGG | 0.231749 | 3_4:+80305000 | Msa0526450:three_prime_UTR |
| GAATAAGGCAAAGTCTTTAT+TGG | 0.236884 | 3_4:-80298892 | None:intergenic |
| AGCGCGTGGGTGGGGTGGGG+TGG | 0.240516 | 3_4:-80298951 | None:intergenic |
| GCGATTTAATGTGTGATATT+AGG | 0.248116 | 3_4:+80305279 | Msa0526450:three_prime_UTR |
| TTTGACTTCAATTTATATAT+TGG | 0.254913 | 3_4:+80305188 | Msa0526450:three_prime_UTR |
| GACAAGCGTGACGGGAAGTT+TGG | 0.287119 | 3_4:+80304699 | Msa0526450:CDS |
| TGTGGGAAGTGAGGAAATTT+CGG | 0.298616 | 3_4:+80304415 | Msa0526450:CDS |
| CCAGCATATGGGCAGAATTA+TGG | 0.301754 | 3_4:+80304810 | Msa0526450:CDS |
| CCCTGAGCTGGTGGTTGGGC+AGG | 0.324739 | 3_4:-80304840 | None:intergenic |
| TGCAACTCCGGCAGAATTAC+CGG | 0.334750 | 3_4:+80299218 | Msa0526450:CDS |
| AGGCTCACAGCCGCCAAGTT+TGG | 0.341230 | 3_4:+80305299 | Msa0526450:three_prime_UTR |
| ACCTTGACATATCATCATAA+AGG | 0.341368 | 3_4:-80300666 | None:intergenic |
| TTCTCAAATACTATCTTGTT+TGG | 0.350032 | 3_4:+80304442 | Msa0526450:CDS |
| GGCAGAATTACCGGAATCTA+TGG | 0.355115 | 3_4:+80299227 | Msa0526450:CDS |
| ACCTGCCCAACCACCAGCTC+AGG | 0.357224 | 3_4:+80304839 | Msa0526450:CDS |
| TTGTTTGGTTATGTGCAATA+TGG | 0.357347 | 3_4:+80305224 | Msa0526450:three_prime_UTR |
| GAAAGCGCGTGGGTGGGGTG+GGG | 0.372529 | 3_4:-80298954 | None:intergenic |
| AGAAAGCGCGTGGGTGGGGT+GGG | 0.375901 | 3_4:-80298955 | None:intergenic |
| GGTGTTTATATAATCTTGTT+TGG | 0.382421 | 3_4:+80305209 | Msa0526450:three_prime_UTR |
| TCTCTCAGATCTATCCATCT+AGG | 0.387277 | 3_4:+80299114 | Msa0526450:intron |
| GAAAATCAAATCAAATGAAA+TGG | 0.391155 | 3_4:-80298922 | None:intergenic |
| GGAGAAGTAGCAACCCTAGA+TGG | 0.396885 | 3_4:-80299128 | None:intergenic |
| TCAGTCAGAAATCCAAACTT+AGG | 0.399397 | 3_4:-80305129 | None:intergenic |
| GACTCAGCACAAGGTTGAAA+TGG | 0.402052 | 3_4:+80304677 | Msa0526450:intron |
| GCGCGTGGGTGGGGTGGGGT+GGG | 0.403093 | 3_4:-80298950 | None:intergenic |
| ACATATTTCTTGGCCAAACT+TGG | 0.405256 | 3_4:-80305312 | None:intergenic |
| AACCAGTTCCTCCTTCTGTT+GGG | 0.408203 | 3_4:+80304775 | Msa0526450:CDS |
| CAACCAGTTCCTCCTTCTGT+TGG | 0.416484 | 3_4:+80304774 | Msa0526450:CDS |
| ACAAGCGTGACGGGAAGTTT+GGG | 0.424681 | 3_4:+80304700 | Msa0526450:CDS |
| TGAGCTGGTGGTTGGGCAGG+TGG | 0.425407 | 3_4:-80304837 | None:intergenic |
| TCAGTACAGAGGCAAAATTC+AGG | 0.426098 | 3_4:-80300825 | None:intergenic |
| TATGCACCACAACCAGCATA+TGG | 0.434907 | 3_4:+80304798 | Msa0526450:CDS |
| CCTTGACATATCATCATAAA+GGG | 0.442804 | 3_4:-80300665 | None:intergenic |
| AGAGAGAAAGCGCGTGGGTG+GGG | 0.445983 | 3_4:-80298959 | None:intergenic |
| ATAGCCCTGAGCTGGTGGTT+GGG | 0.448583 | 3_4:-80304844 | None:intergenic |
| GATAGCCCTGAGCTGGTGGT+TGG | 0.453696 | 3_4:-80304845 | None:intergenic |
| ATGCGGGACATTTGCTGTAC+AGG | 0.454843 | 3_4:-80304747 | None:intergenic |
| TTCCTCACTTCCCACAATCA+TGG | 0.455138 | 3_4:-80304408 | None:intergenic |
| ATATGCATGCAACTTGGTTA+AGG | 0.460046 | 3_4:-80304373 | None:intergenic |
| CGGTTCCTGAAACAATCAAT+AGG | 0.461457 | 3_4:-80305005 | None:intergenic |
| CAGTCAGAAATCCAAACTTA+GGG | 0.462224 | 3_4:-80305128 | None:intergenic |
| ACTCCCACTTGGTAAACGTT+GGG | 0.463735 | 3_4:+80298742 | None:intergenic |
| GAGAAAGCGCGTGGGTGGGG+TGG | 0.471365 | 3_4:-80298956 | None:intergenic |
| CTCTCAGATCTATCCATCTA+GGG | 0.472925 | 3_4:+80299115 | Msa0526450:intron |
| TGAAGTCAAAAGTATAAGAA+TGG | 0.473824 | 3_4:-80305175 | None:intergenic |
| TTCTCCACACCTACCACTGC+AGG | 0.479185 | 3_4:-80300793 | None:intergenic |
| GTCGTTTGTAAGAGTGAGTC+AGG | 0.481556 | 3_4:+80298808 | Msa0526450:five_prime_UTR |
| TACCCAACAGAAGGAGGAAC+TGG | 0.482353 | 3_4:-80304777 | None:intergenic |
| GGCACTGCCATCACTGGTTG+CGG | 0.482881 | 3_4:-80304723 | None:intergenic |
| CTCTATTGTTGCCATGATTG+TGG | 0.490690 | 3_4:+80304397 | Msa0526450:CDS |
| GATCAGTGTGCCATAGATTC+CGG | 0.496322 | 3_4:-80299237 | None:intergenic |
| TCCAGATACACATGCTGTGC+TGG | 0.497369 | 3_4:+80300762 | Msa0526450:intron |
| TCTTACAAACGACGCATCGT+AGG | 0.503435 | 3_4:-80298798 | None:intergenic |
| TTGAAATGGACAAGCGTGAC+GGG | 0.503821 | 3_4:+80304691 | Msa0526450:CDS |
| TATTTCTTGGCCAAACTTGG+CGG | 0.506673 | 3_4:-80305309 | None:intergenic |
| TGTTGTGGAGGATAAGCAGC+AGG | 0.509075 | 3_4:-80304885 | None:intergenic |
| CCTTGTGGAGGATAAGCAGC+AGG | 0.512049 | 3_4:-80304918 | None:intergenic |
| TAGGGTTGCTACTTCTCCTC+CGG | 0.515434 | 3_4:+80299133 | Msa0526450:five_prime_UTR |
| TTCTGCCCATATGCTGGTTG+TGG | 0.520583 | 3_4:-80304804 | None:intergenic |
| TCTATTGTTGCCATGATTGT+GGG | 0.521129 | 3_4:+80304398 | Msa0526450:CDS |
| CCATAATTCTGCCCATATGC+TGG | 0.523656 | 3_4:-80304810 | None:intergenic |
| AAGGCAAAGTCTTTATTGGC+CGG | 0.525948 | 3_4:-80298888 | None:intergenic |
| AGAGAGAGAAAGCGCGTGGG+TGG | 0.527835 | 3_4:-80298961 | None:intergenic |
| GCTCAGGGCTATCCCGCTAC+TGG | 0.528162 | 3_4:+80304855 | Msa0526450:CDS |
| TGATCTCATGAGAACTATCC+AGG | 0.529386 | 3_4:+80299255 | Msa0526450:CDS |
| GTAGCGGGATAGCCCTGAGC+TGG | 0.535476 | 3_4:-80304852 | None:intergenic |
| ACAGGAGGCACTGCCATCAC+TGG | 0.536277 | 3_4:-80304729 | None:intergenic |
| TACTCCCACTTGGTAAACGT+TGG | 0.539005 | 3_4:+80298741 | None:intergenic |
| AGGAACTGGTTGATCAATGC+GGG | 0.542027 | 3_4:-80304763 | None:intergenic |
| AATATCACACATTAAATCGC+GGG | 0.542534 | 3_4:-80305276 | None:intergenic |
| GTTTGGGCCGCAACCAGTGA+TGG | 0.543967 | 3_4:+80304716 | Msa0526450:CDS |
| TCTCTGCTTTGGAAATTCAG+TGG | 0.544883 | 3_4:+80304020 | Msa0526450:CDS |
| TAGGGTGTGTGCGTGCATGC+AGG | 0.544903 | 3_4:+80304571 | Msa0526450:intron |
| CAGATTGCTGCTTATCCTTG+TGG | 0.547142 | 3_4:+80299396 | Msa0526450:intron |
| TTCTTCTTCTTCTTTGCCGG+AGG | 0.548168 | 3_4:-80299149 | None:intergenic |
| AAATTTAGAGCAGTTTGTGT+TGG | 0.555860 | 3_4:+80304974 | Msa0526450:three_prime_UTR |
| GTTACATGCCCTGCAGTGGT+AGG | 0.556389 | 3_4:+80300784 | Msa0526450:CDS |
| TAGAGAATATGCATGCAACT+TGG | 0.557546 | 3_4:-80304379 | None:intergenic |
| ATCTTGAGAAAATGCAACTC+CGG | 0.559310 | 3_4:+80299206 | Msa0526450:CDS |
| CTTACAAACGACGCATCGTA+GGG | 0.561411 | 3_4:-80298797 | None:intergenic |
| GAGAGAGAAAGCGCGTGGGT+GGG | 0.567611 | 3_4:-80298960 | None:intergenic |
| TATGAACTATTGTAACTGCC+AGG | 0.573029 | 3_4:+80298841 | Msa0526450:five_prime_UTR |
| ATAGATTCCGGTAATTCTGC+CGG | 0.573475 | 3_4:-80299225 | None:intergenic |
| CCTGCCCAACCACCAGCTCA+GGG | 0.573738 | 3_4:+80304840 | Msa0526450:CDS |
| AGAGTGAGTCAGGTCAGCTA+TGG | 0.577970 | 3_4:+80298818 | Msa0526450:five_prime_UTR |
| ATCACCTAGAATAACCAGAA+GGG | 0.579600 | 3_4:-80304947 | None:intergenic |
| ATGCACCACAACCAGCATAT+GGG | 0.582709 | 3_4:+80304799 | Msa0526450:CDS |
| GCGGGATAGCCCTGAGCTGG+TGG | 0.587686 | 3_4:-80304849 | None:intergenic |
| GTTGTGGAGGATAAGCAGCA+GGG | 0.593369 | 3_4:-80304884 | None:intergenic |
| GCTTACATGGAGTATCGACC+TGG | 0.596144 | 3_4:-80299273 | None:intergenic |
| CTTGTGGAGGATAAGCAGCA+GGG | 0.596976 | 3_4:-80304917 | None:intergenic |
| ATTGCTGCTTATCCTTGTGG+TGG | 0.597371 | 3_4:+80299399 | Msa0526450:CDS |
| AGAAAGAGAGAGAAAGCGCG+TGG | 0.604158 | 3_4:-80298965 | None:intergenic |
| AAAACTAAACTACTCCCACT+TGG | 0.606103 | 3_4:+80298731 | None:intergenic |
| CCCTTTATGATGATATGTCA+AGG | 0.608347 | 3_4:+80300665 | Msa0526450:CDS |
| CGAAGCAAGTATGATACACA+TGG | 0.611216 | 3_4:-80300634 | None:intergenic |
| TCACCTAGAATAACCAGAAG+GGG | 0.621429 | 3_4:-80304946 | None:intergenic |
| TTATTTGCAGACTCAGCACA+AGG | 0.625897 | 3_4:+80304668 | Msa0526450:intron |
| GCTGGTTACATGCCCTGCAG+TGG | 0.628209 | 3_4:+80300780 | Msa0526450:CDS |
| CCTGCTGCTTATCCTCCACA+AGG | 0.630522 | 3_4:+80304918 | Msa0526450:CDS |
| AATCCCAACGTTTACCAAGT+GGG | 0.633212 | 3_4:-80298745 | None:intergenic |
| TAATATCACACATTAAATCG+CGG | 0.638090 | 3_4:-80305277 | None:intergenic |
| ATGCCCTGCAGTGGTAGGTG+TGG | 0.638395 | 3_4:+80300789 | Msa0526450:CDS |
| CGGTGTAGAGTAGAAGACAC+TGG | 0.638805 | 3_4:-80298989 | None:intergenic |
| GAAAGAGAGAGAAAGCGCGT+GGG | 0.640039 | 3_4:-80298964 | None:intergenic |
| GTCAGAAATCCAAACTTAGG+GGG | 0.640246 | 3_4:-80305126 | None:intergenic |
| TGTGGTGCATACCCAACAGA+AGG | 0.640639 | 3_4:-80304786 | None:intergenic |
| TATCACCTAGAATAACCAGA+AGG | 0.641227 | 3_4:-80304948 | None:intergenic |
| GGGAAGTGAGGAAATTTCGG+AGG | 0.641644 | 3_4:+80304418 | Msa0526450:CDS |
| TTGCAACAGAAAGCGAGTTG+AGG | 0.642740 | 3_4:-80304043 | None:intergenic |
| CGGGACATTTGCTGTACAGG+AGG | 0.642937 | 3_4:-80304744 | None:intergenic |
| TCTCCACACCTACCACTGCA+GGG | 0.646565 | 3_4:-80300792 | None:intergenic |
| TGCCATGATTGTGGGAAGTG+AGG | 0.647664 | 3_4:+80304406 | Msa0526450:CDS |
| GCTGCTTATCCTCCACAACA+AGG | 0.651296 | 3_4:+80304888 | Msa0526450:CDS |
| AGTCTTACGAGCAGTAAACA+AGG | 0.652877 | 3_4:-80304469 | None:intergenic |
| GGTGCATACCCAACAGAAGG+AGG | 0.662450 | 3_4:-80304783 | None:intergenic |
| TTGTGGAGGATAAGCAGCAG+GGG | 0.664484 | 3_4:-80304916 | None:intergenic |
| GTTGAAATGGACAAGCGTGA+CGG | 0.665093 | 3_4:+80304690 | Msa0526450:CDS |
| TTGTGGAGGATAAGCAGCAG+GGG | 0.675822 | 3_4:-80304883 | None:intergenic |
| TAATCCCAACGTTTACCAAG+TGG | 0.676713 | 3_4:-80298746 | None:intergenic |
| CACCTAGAATAACCAGAAGG+GGG | 0.685790 | 3_4:-80304945 | None:intergenic |
| GTTTATATACCTCAGTACAG+AGG | 0.692939 | 3_4:-80300836 | None:intergenic |
| AGTCAGAAATCCAAACTTAG+GGG | 0.693770 | 3_4:-80305127 | None:intergenic |
| TACGAAATTGAAGAAAACAA+CGG | 0.696555 | 3_4:-80305025 | None:intergenic |
| TGTGGAGGATAAGCAGCAGG+GGG | 0.703339 | 3_4:-80304882 | None:intergenic |
| TGTGGAGGATAAGCAGCAGG+GGG | 0.704394 | 3_4:-80304915 | None:intergenic |
| ATCAAGCAGTCATATGTGTG+TGG | 0.708124 | 3_4:+80305061 | Msa0526450:three_prime_UTR |
| GTGGAGGATAAGCAGCAGGG+GGG | 0.717882 | 3_4:-80304881 | None:intergenic |
| ATGGATGACATACCACCACA+AGG | 0.728919 | 3_4:-80299411 | None:intergenic |
| GAGGAACTGGTTGATCAATG+CGG | 0.734048 | 3_4:-80304764 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATTAATGATAGAAA+TGG | - | chr3_4:80299342-80299361 | None:intergenic | 10.0% |
| !!! | ATCAATAAAAAAAAGTATTT+TGG | - | chr3_4:80304305-80304324 | None:intergenic | 10.0% |
| !!! | CAATAAAAATTGAAAGTATT+TGG | - | chr3_4:80301805-80301824 | None:intergenic | 15.0% |
| !!! | CAAATACTTTCAATTTTTAT+TGG | + | chr3_4:80301803-80301822 | Msa0526450:intron | 15.0% |
| !! | TATATATATTGAAGAGAAAA+GGG | - | chr3_4:80302055-80302074 | None:intergenic | 15.0% |
| !! | ACTATAAGGAAATTTAAAAA+CGG | - | chr3_4:80302997-80303016 | None:intergenic | 15.0% |
| !! | CCTAAAATGAAAAAAAAAAA+AGG | - | chr3_4:80303467-80303486 | None:intergenic | 15.0% |
| !!! | CCTTTTTTTTTTTTCATTTT+AGG | + | chr3_4:80303464-80303483 | Msa0526450:intron | 15.0% |
| !! | TATTTGAATATAGTTGTAAA+AGG | + | chr3_4:80303559-80303578 | Msa0526450:intron | 15.0% |
| !!! | ATATGCAATTTTTTTGTTTA+GGG | + | chr3_4:80304216-80304235 | Msa0526450:intron | 15.0% |
| !!! | ATATGCAATTTTTTTGTTTA+GGG | + | chr3_4:80304216-80304235 | Msa0526450:intron | 15.0% |
| !!! | TTTGACTTCAATTTATATAT+TGG | + | chr3_4:80305188-80305207 | Msa0526450:three_prime_UTR | 15.0% |
| !!! | TGAAATGGAATTTTTGAATA+AGG | - | chr3_4:80298910-80298929 | None:intergenic | 20.0% |
| !! | GAAAATCAAATCAAATGAAA+TGG | - | chr3_4:80298925-80298944 | None:intergenic | 20.0% |
| !! | GAAAATGAAAATAACGAAAT+AGG | - | chr3_4:80299066-80299085 | None:intergenic | 20.0% |
| !! | TGAAAAACACAATAAAATGT+TGG | + | chr3_4:80299835-80299854 | Msa0526450:intron | 20.0% |
| !! | GTAACAATCAATATAAATAC+AGG | - | chr3_4:80300026-80300045 | None:intergenic | 20.0% |
| !!! | TTATTCTTTTGTAAGAAAAG+AGG | + | chr3_4:80300121-80300140 | Msa0526450:intron | 20.0% |
| !!! | TATTCTTTTGTAAGAAAAGA+GGG | + | chr3_4:80300122-80300141 | Msa0526450:intron | 20.0% |
| !! | CTATTAGGAAAATAAGTAAT+AGG | - | chr3_4:80300581-80300600 | None:intergenic | 20.0% |
| !! | CAGAACATTAAATTACTATT+AGG | - | chr3_4:80300596-80300615 | None:intergenic | 20.0% |
| !! | AAAGTCATATAATATGACTA+GGG | + | chr3_4:80301009-80301028 | Msa0526450:intron | 20.0% |
| !! | AGAAAGAAAATACATGTATA+GGG | + | chr3_4:80301045-80301064 | Msa0526450:intron | 20.0% |
| !!! | CTGTTTTTATTGTTGTATTT+GGG | + | chr3_4:80301121-80301140 | Msa0526450:intron | 20.0% |
| !!! | GATCTATACTTTTATTACTA+TGG | + | chr3_4:80301261-80301280 | Msa0526450:intron | 20.0% |
| !! | ATATATATTGAAGAGAAAAG+GGG | - | chr3_4:80302054-80302073 | None:intergenic | 20.0% |
| !! | CTATATATATTGAAGAGAAA+AGG | - | chr3_4:80302056-80302075 | None:intergenic | 20.0% |
| !!! | AGTATATCCTTTGAAATTAT+AGG | + | chr3_4:80302964-80302983 | Msa0526450:intron | 20.0% |
| !!! | GTATATCCTTTGAAATTATA+GGG | + | chr3_4:80302965-80302984 | Msa0526450:intron | 20.0% |
| !! | AAAAGATGTACAATTAGAAA+TGG | - | chr3_4:80303024-80303043 | None:intergenic | 20.0% |
| !!! | TTTAAAACTTCTATCGTATT+AGG | + | chr3_4:80303100-80303119 | Msa0526450:intron | 20.0% |
| !! | ACCAAGATTTAATATTTGAA+AGG | + | chr3_4:80303157-80303176 | Msa0526450:intron | 20.0% |
| !! | TCCTTTCAAATATTAAATCT+TGG | - | chr3_4:80303161-80303180 | None:intergenic | 20.0% |
| !!! | ATTTAGTTCATTATCAACAA+TGG | - | chr3_4:80303332-80303351 | None:intergenic | 20.0% |
| !! | ATTTATTTCATGATCAAATG+AGG | + | chr3_4:80303353-80303372 | Msa0526450:intron | 20.0% |
| !! | TAAATACTATAGTTGAACAA+CGG | - | chr3_4:80303443-80303462 | None:intergenic | 20.0% |
| !!! | CTATAAGTGAAACAATTTTT+TGG | + | chr3_4:80303591-80303610 | Msa0526450:intron | 20.0% |
| !! | TATGAATGAAATAAAGAGAT+GGG | - | chr3_4:80304137-80304156 | None:intergenic | 20.0% |
| !!! | CATATGCAATTTTTTTGTTT+AGG | + | chr3_4:80304215-80304234 | Msa0526450:intron | 20.0% |
| !!! | CATATGCAATTTTTTTGTTT+AGG | + | chr3_4:80304215-80304234 | Msa0526450:intron | 20.0% |
| !!! | TTATGTTTCTTTTGTTTGTA+GGG | + | chr3_4:80304553-80304572 | Msa0526450:intron | 20.0% |
| ! | TTGAATAACTGTTTGCTTAA+TGG | + | chr3_4:80299586-80299605 | Msa0526450:intron | 25.0% |
| !! | TGATTGTTACTTGATTTAGT+CGG | + | chr3_4:80300036-80300055 | Msa0526450:intron | 25.0% |
| ! | ATACATATCACACAAACAAA+CGG | - | chr3_4:80300729-80300748 | None:intergenic | 25.0% |
| ! | CATGCATGTAAAAAAAAAGA+AGG | - | chr3_4:80300875-80300894 | None:intergenic | 25.0% |
| ! | ATTTAAGCTCATGCATAAAA+TGG | + | chr3_4:80300973-80300992 | Msa0526450:intron | 25.0% |
| ! | TTTAAGCTCATGCATAAAAT+GGG | + | chr3_4:80300974-80300993 | Msa0526450:intron | 25.0% |
| ! | CAAAGTCATATAATATGACT+AGG | + | chr3_4:80301008-80301027 | Msa0526450:intron | 25.0% |
| ! | GAGAAAGAAAATACATGTAT+AGG | + | chr3_4:80301044-80301063 | Msa0526450:intron | 25.0% |
| !!! | GCTGTTTTTATTGTTGTATT+TGG | + | chr3_4:80301120-80301139 | Msa0526450:intron | 25.0% |
| !! | TTCTTCTACATAGTTTTTGT+TGG | + | chr3_4:80301222-80301241 | Msa0526450:intron | 25.0% |
| !! | TAAAAGTATAGATCAGATGA+GGG | - | chr3_4:80301255-80301274 | None:intergenic | 25.0% |
| !! | ATAAAAGTATAGATCAGATG+AGG | - | chr3_4:80301256-80301275 | None:intergenic | 25.0% |
| ! | GTGTGTACTATGTAATAAAA+CGG | - | chr3_4:80301551-80301570 | None:intergenic | 25.0% |
| ! | TATATATTGAAGAGAAAAGG+GGG | - | chr3_4:80302053-80302072 | None:intergenic | 25.0% |
| ! | AATTGTCAATATTCTGTGAT+TGG | + | chr3_4:80302080-80302099 | Msa0526450:intron | 25.0% |
| !!! | CATATAAACACTGATTTCAA+TGG | - | chr3_4:80302322-80302341 | None:intergenic | 25.0% |
| ! | CATTGAAATCAGTGTTTATA+TGG | + | chr3_4:80302320-80302339 | Msa0526450:intron | 25.0% |
| !! | TGTGTTTATATGGTAGATTT+TGG | + | chr3_4:80302420-80302439 | Msa0526450:intron | 25.0% |
| ! | ATTGCAATTTATCGTGAAAT+TGG | + | chr3_4:80302466-80302485 | Msa0526450:intron | 25.0% |
| !! | TTTTCACTTCTCTCTTAATT+CGG | - | chr3_4:80302650-80302669 | None:intergenic | 25.0% |
| ! | TGATTAACTAATTTCCTGTT+TGG | + | chr3_4:80302876-80302895 | Msa0526450:intron | 25.0% |
| ! | GATTAACTAATTTCCTGTTT+GGG | + | chr3_4:80302877-80302896 | Msa0526450:intron | 25.0% |
| ! | AATTTCAAAGGATATACTAC+AGG | - | chr3_4:80302962-80302981 | None:intergenic | 25.0% |
| ! | ATTGTTCCCTATAATTTCAA+AGG | - | chr3_4:80302974-80302993 | None:intergenic | 25.0% |
| !!! | TCTTGGTCAAGTTTTATATT+GGG | - | chr3_4:80303144-80303163 | None:intergenic | 25.0% |
| !!! | ATCTTGGTCAAGTTTTATAT+TGG | - | chr3_4:80303145-80303164 | None:intergenic | 25.0% |
| ! | AAATACTATAGTTGAACAAC+GGG | - | chr3_4:80303442-80303461 | None:intergenic | 25.0% |
| ! | GTATGAATGAAATAAAGAGA+TGG | - | chr3_4:80304138-80304157 | None:intergenic | 25.0% |
| ! | TTCTCAAATACTATCTTGTT+TGG | + | chr3_4:80304442-80304461 | Msa0526450:CDS | 25.0% |
| !!! | CTTATGTTTCTTTTGTTTGT+AGG | + | chr3_4:80304552-80304571 | Msa0526450:intron | 25.0% |
| !!! | GTAAGTATGTTACTTTTTAC+CGG | + | chr3_4:80304593-80304612 | Msa0526450:intron | 25.0% |
| ! | TACGAAATTGAAGAAAACAA+CGG | - | chr3_4:80305028-80305047 | None:intergenic | 25.0% |
| !! | TGAAGTCAAAAGTATAAGAA+TGG | - | chr3_4:80305178-80305197 | None:intergenic | 25.0% |
| ! | GGTGTTTATATAATCTTGTT+TGG | + | chr3_4:80305209-80305228 | Msa0526450:three_prime_UTR | 25.0% |
| ! | TAATATCACACATTAAATCG+CGG | - | chr3_4:80305280-80305299 | None:intergenic | 25.0% |
| AAGTGAAAAAGTCGAAAAAC+CGG | + | chr3_4:80298869-80298888 | Msa0526450:five_prime_UTR | 30.0% | |
| GAATAAGGCAAAGTCTTTAT+TGG | - | chr3_4:80298895-80298914 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAGAAA+TGG | + | chr3_4:80299171-80299190 | Msa0526450:exon | 30.0% | |
| TAAAAAGAGTGATGAAAGTG+TGG | - | chr3_4:80299306-80299325 | None:intergenic | 30.0% | |
| ! | TGCTGTTAAATTGTCGTTTA+TGG | + | chr3_4:80299510-80299529 | Msa0526450:intron | 30.0% |
| ! | CGTTTATGGATTTTAGATCT+TGG | + | chr3_4:80299524-80299543 | Msa0526450:intron | 30.0% |
| ATAATCACACATGTCAGTAT+TGG | - | chr3_4:80299710-80299729 | None:intergenic | 30.0% | |
| !! | CAATGACTGAATTACTTTTG+TGG | + | chr3_4:80299948-80299967 | Msa0526450:intron | 30.0% |
| AATTATTCAGCTTGATCAAC+TGG | - | chr3_4:80300102-80300121 | None:intergenic | 30.0% | |
| TGAATGAGCATCTAAATTCA+AGG | - | chr3_4:80300284-80300303 | None:intergenic | 30.0% | |
| TACAAAGAGATACTTGGAAA+TGG | - | chr3_4:80300354-80300373 | None:intergenic | 30.0% | |
| ACAAAGTACAAAGAGATACT+TGG | - | chr3_4:80300360-80300379 | None:intergenic | 30.0% | |
| TAATCACCAAGTAATGAATC+AGG | - | chr3_4:80300464-80300483 | None:intergenic | 30.0% | |
| ! | CAGTTGATTGCAATTTTACT+TGG | + | chr3_4:80300509-80300528 | Msa0526450:intron | 30.0% |
| !!! | CAATTTTACTTGGCCTTAAT+AGG | + | chr3_4:80300519-80300538 | Msa0526450:intron | 30.0% |
| AACATTTATGCCTCCTATTA+AGG | - | chr3_4:80300535-80300554 | None:intergenic | 30.0% | |
| CCTTGACATATCATCATAAA+GGG | - | chr3_4:80300668-80300687 | None:intergenic | 30.0% | |
| ACCTTGACATATCATCATAA+AGG | - | chr3_4:80300669-80300688 | None:intergenic | 30.0% | |
| CTTAAATCATGCAATGTCTA+AGG | - | chr3_4:80300960-80300979 | None:intergenic | 30.0% | |
| TTAAGCTCATGCATAAAATG+GGG | + | chr3_4:80300975-80300994 | Msa0526450:intron | 30.0% | |
| !! | GTACAATATTAAGCTTGTTG+CGG | + | chr3_4:80301098-80301117 | Msa0526450:intron | 30.0% |
| CTATGTAGAAGAAACTATCA+AGG | - | chr3_4:80301215-80301234 | None:intergenic | 30.0% | |
| AAGTTGTATGAAATGTTGGA+TGG | - | chr3_4:80301479-80301498 | None:intergenic | 30.0% | |
| AACATTTCATACAACTTCAC+CGG | + | chr3_4:80301482-80301501 | Msa0526450:intron | 30.0% | |
| ! | ATGACATTTTCCTATTAGCT+AGG | + | chr3_4:80301519-80301538 | Msa0526450:intron | 30.0% |
| ! | TGACATTTTCCTATTAGCTA+GGG | + | chr3_4:80301520-80301539 | Msa0526450:intron | 30.0% |
| TATACTGAAGCAAATTATGC+AGG | - | chr3_4:80301660-80301679 | None:intergenic | 30.0% | |
| AGATCACTCTTATTCATAAG+AGG | - | chr3_4:80301703-80301722 | None:intergenic | 30.0% | |
| !! | ATTGAAAGTATTTGGCATTG+TGG | - | chr3_4:80301797-80301816 | None:intergenic | 30.0% |
| !! | GCAACACTGACTTATAAAAA+GGG | - | chr3_4:80302006-80302025 | None:intergenic | 30.0% |
| !!! | CATGTTCAGTTTTAGATACT+TGG | + | chr3_4:80302264-80302283 | Msa0526450:intron | 30.0% |
| !!! | AGTTTTAGATACTTGGACAA+TGG | + | chr3_4:80302271-80302290 | Msa0526450:intron | 30.0% |
| TCAATGGACATTTATGAGTA+TGG | - | chr3_4:80302306-80302325 | None:intergenic | 30.0% | |
| TTTCACTTCTCTCTTAATTC+GGG | - | chr3_4:80302649-80302668 | None:intergenic | 30.0% | |
| TTATAAAGAGGAAGTGAAGA+GGG | - | chr3_4:80302770-80302789 | None:intergenic | 30.0% | |
| CTTCCTCTTTATAACAGAAT+TGG | + | chr3_4:80302776-80302795 | Msa0526450:intron | 30.0% | |
| TGACCAATTCTGTTATAAAG+AGG | - | chr3_4:80302782-80302801 | None:intergenic | 30.0% | |
| TAACATTGTTCACCACATAA+TGG | + | chr3_4:80302842-80302861 | Msa0526450:intron | 30.0% | |
| CAGTTAGAAACATAACTGTT+AGG | - | chr3_4:80302923-80302942 | None:intergenic | 30.0% | |
| ! | ACAGTTATGTTTCTAACTGT+AGG | + | chr3_4:80302924-80302943 | Msa0526450:intron | 30.0% |
| TCTAACTGTAGGATGATTAA+AGG | + | chr3_4:80302935-80302954 | Msa0526450:intron | 30.0% | |
| ! | TTAGAAATGGTGGAACTATA+AGG | - | chr3_4:80303011-80303030 | None:intergenic | 30.0% |
| AGATGTACAATTAGAAATGG+TGG | - | chr3_4:80303021-80303040 | None:intergenic | 30.0% | |
| ! | CATCTTTTATAGTGCTCTAA+CGG | + | chr3_4:80303036-80303055 | Msa0526450:intron | 30.0% |
| !! | CTTGGTCAAGTTTTATATTG+GGG | - | chr3_4:80303143-80303162 | None:intergenic | 30.0% |
| AATATTTGAAAGGAAACCTG+TGG | + | chr3_4:80303167-80303186 | Msa0526450:intron | 30.0% | |
| ! | AAAATCCAGTTTAAAACCAC+AGG | - | chr3_4:80303186-80303205 | None:intergenic | 30.0% |
| ! | GAAATACAGTTTGTTCAAGA+TGG | + | chr3_4:80303259-80303278 | Msa0526450:intron | 30.0% |
| ATCAACAATGGCATAAAAAC+CGG | - | chr3_4:80303320-80303339 | None:intergenic | 30.0% | |
| AGGATTGAAAATACACTTTC+AGG | + | chr3_4:80303380-80303399 | Msa0526450:intron | 30.0% | |
| ATTGAAAATACACTTTCAGG+TGG | + | chr3_4:80303383-80303402 | Msa0526450:intron | 30.0% | |
| TAAGAGAAAGTAGAAAAGTG+TGG | + | chr3_4:80303696-80303715 | Msa0526450:intron | 30.0% | |
| ! | TAGAAAAGTGTGGAGAAATT+TGG | + | chr3_4:80303706-80303725 | Msa0526450:intron | 30.0% |
| CATTAACTAAAGATCAGACA+GGG | + | chr3_4:80303903-80303922 | Msa0526450:intron | 30.0% | |
| !! | TGAAACAAACACTAGCTTTA+AGG | - | chr3_4:80303932-80303951 | None:intergenic | 30.0% |
| ! | TGTTTCACTTGAATTTTCTG+TGG | + | chr3_4:80303945-80303964 | Msa0526450:intron | 30.0% |
| !! | CTATTATGCATTGTTGTTTC+AGG | + | chr3_4:80303993-80304012 | Msa0526450:intron | 30.0% |
| ! | AAATTTAGAGCAGTTTGTGT+TGG | + | chr3_4:80304974-80304993 | Msa0526450:three_prime_UTR | 30.0% |
| TTGTTTGGTTATGTGCAATA+TGG | + | chr3_4:80305224-80305243 | Msa0526450:three_prime_UTR | 30.0% | |
| AATATCACACATTAAATCGC+GGG | - | chr3_4:80305279-80305298 | None:intergenic | 30.0% | |
| GCGATTTAATGTGTGATATT+AGG | + | chr3_4:80305279-80305298 | Msa0526450:three_prime_UTR | 30.0% | |
| TATGAACTATTGTAACTGCC+AGG | + | chr3_4:80298841-80298860 | Msa0526450:five_prime_UTR | 35.0% | |
| !!! | GGTTTTTCGACTTTTTCACT+TGG | - | chr3_4:80298870-80298889 | None:intergenic | 35.0% |
| ACCAAGGAATGAAGGAATTA+CGG | - | chr3_4:80299012-80299031 | None:intergenic | 35.0% | |
| TAATTCCTTCATTCCTTGGT+TGG | + | chr3_4:80299012-80299031 | Msa0526450:intron | 35.0% | |
| TCTTTCAATCAATCCAACCA+AGG | - | chr3_4:80299028-80299047 | None:intergenic | 35.0% | |
| TTCTTCTTCTTCTTCTTTGC+CGG | - | chr3_4:80299155-80299174 | None:intergenic | 35.0% | |
| ATCTTGAGAAAATGCAACTC+CGG | + | chr3_4:80299206-80299225 | Msa0526450:CDS | 35.0% | |
| GAGATCTGAAAAGAGAGTTA+TGG | - | chr3_4:80299433-80299452 | None:intergenic | 35.0% | |
| !! | TGCATCGTTTTAAGTAGATG+AGG | + | chr3_4:80299801-80299820 | Msa0526450:intron | 35.0% |
| TTTGTAAGAAAAGAGGGTAG+TGG | + | chr3_4:80300128-80300147 | Msa0526450:intron | 35.0% | |
| TTGTAAGAAAAGAGGGTAGT+GGG | + | chr3_4:80300129-80300148 | Msa0526450:intron | 35.0% | |
| CCAAAATGATAGATCACAAG+CGG | - | chr3_4:80300423-80300442 | None:intergenic | 35.0% | |
| CAATGACCTGATTCATTACT+TGG | + | chr3_4:80300455-80300474 | Msa0526450:intron | 35.0% | |
| !!! | TTTTACTTGGCCTTAATAGG+AGG | + | chr3_4:80300522-80300541 | Msa0526450:intron | 35.0% |
| CCCTTTATGATGATATGTCA+AGG | + | chr3_4:80300665-80300684 | Msa0526450:CDS | 35.0% | |
| ! | ACAAACGGTGCAATTCATTT+TGG | - | chr3_4:80300714-80300733 | None:intergenic | 35.0% |
| GTTTATATACCTCAGTACAG+AGG | - | chr3_4:80300839-80300858 | None:intergenic | 35.0% | |
| ! | GTTTTCTTCAAGAGTAGGTT+GGG | + | chr3_4:80300917-80300936 | Msa0526450:intron | 35.0% |
| ! | TTTTCTTCAAGAGTAGGTTG+GGG | + | chr3_4:80300918-80300937 | Msa0526450:intron | 35.0% |
| TATAATATGACTAGGGCAAG+AGG | + | chr3_4:80301016-80301035 | Msa0526450:intron | 35.0% | |
| AAGAAACTATCAAGGCTTAG+AGG | - | chr3_4:80301207-80301226 | None:intergenic | 35.0% | |
| ! | TCAATCATCTTTTCTACCGT+AGG | + | chr3_4:80301331-80301350 | Msa0526450:intron | 35.0% |
| ! | CAATCATCTTTTCTACCGTA+GGG | + | chr3_4:80301332-80301351 | Msa0526450:intron | 35.0% |
| ! | AATCATCTTTTCTACCGTAG+GGG | + | chr3_4:80301333-80301352 | Msa0526450:intron | 35.0% |
| !! | TAGAATTTTGATAGCCCCTA+CGG | - | chr3_4:80301350-80301369 | None:intergenic | 35.0% |
| GTACTAGATGAGTTAGACTT+GGG | - | chr3_4:80301390-80301409 | None:intergenic | 35.0% | |
| AGAATGTTGCTCTTGATGTA+TGG | - | chr3_4:80301415-80301434 | None:intergenic | 35.0% | |
| GGTGAAGTTGTATGAAATGT+TGG | - | chr3_4:80301483-80301502 | None:intergenic | 35.0% | |
| CTTCAGTATAAACCTCTAGT+CGG | + | chr3_4:80301670-80301689 | Msa0526450:intron | 35.0% | |
| TTGTGGCAAAGATTAACACT+GGG | - | chr3_4:80301780-80301799 | None:intergenic | 35.0% | |
| ATTGTGGCAAAGATTAACAC+TGG | - | chr3_4:80301781-80301800 | None:intergenic | 35.0% | |
| TGCCATATGATTGAGTGTAT+CGG | + | chr3_4:80301826-80301845 | Msa0526450:intron | 35.0% | |
| AGTAAATAAACGCCCTTGAA+AGG | - | chr3_4:80301919-80301938 | None:intergenic | 35.0% | |
| !!! | TCAGACAGTTGAAGGTTTTT+TGG | + | chr3_4:80301961-80301980 | Msa0526450:intron | 35.0% |
| !!! | CAGACAGTTGAAGGTTTTTT+GGG | + | chr3_4:80301962-80301981 | Msa0526450:intron | 35.0% |
| !!! | AGACAGTTGAAGGTTTTTTG+GGG | + | chr3_4:80301963-80301982 | Msa0526450:intron | 35.0% |
| !!! | AAGGTTTTTTGGGGATAGAT+TGG | + | chr3_4:80301972-80301991 | Msa0526450:intron | 35.0% |
| !!! | AGGTTTTTTGGGGATAGATT+GGG | + | chr3_4:80301973-80301992 | Msa0526450:intron | 35.0% |
| !! | GGCAACACTGACTTATAAAA+AGG | - | chr3_4:80302007-80302026 | None:intergenic | 35.0% |
| AACAACAGAGACTCAAATTG+CGG | - | chr3_4:80302182-80302201 | None:intergenic | 35.0% | |
| ACCATATAAACACACCATTG+CGG | - | chr3_4:80302414-80302433 | None:intergenic | 35.0% | |
| TCAGATAGAACCTTAGAGAT+GGG | - | chr3_4:80302725-80302744 | None:intergenic | 35.0% | |
| TTCAGATAGAACCTTAGAGA+TGG | - | chr3_4:80302726-80302745 | None:intergenic | 35.0% | |
| GTTATAAAGAGGAAGTGAAG+AGG | - | chr3_4:80302771-80302790 | None:intergenic | 35.0% | |
| TGGTGAACAATGTTATGAGA+AGG | - | chr3_4:80302837-80302856 | None:intergenic | 35.0% | |
| AAACATAACTGTTAGGTGAC+TGG | - | chr3_4:80302916-80302935 | None:intergenic | 35.0% | |
| !! | AAACTGGATTTTGAGAAAGC+TGG | + | chr3_4:80303194-80303213 | Msa0526450:intron | 35.0% |
| ! | GCAATTGGTTAACAAGGTTT+TGG | + | chr3_4:80303233-80303252 | Msa0526450:intron | 35.0% |
| ! | AGTTTGTTCAAGATGGAGAA+TGG | + | chr3_4:80303266-80303285 | Msa0526450:intron | 35.0% |
| TCATGATCAAATGAGGACAT+AGG | + | chr3_4:80303360-80303379 | Msa0526450:intron | 35.0% | |
| ! | TTGTTTCACTTATAGCTCTG+AGG | - | chr3_4:80303586-80303605 | None:intergenic | 35.0% |
| !!! | ACAATTTTTTGGACCTCGTT+TGG | + | chr3_4:80303602-80303621 | Msa0526450:intron | 35.0% |
| !!! | CAATTTTTTGGACCTCGTTT+GGG | + | chr3_4:80303603-80303622 | Msa0526450:intron | 35.0% |
| !!! | AATTTTTTGGACCTCGTTTG+GGG | + | chr3_4:80303604-80303623 | Msa0526450:intron | 35.0% |
| ! | AAAAGTGTGGAGAAATTTGG+AGG | + | chr3_4:80303709-80303728 | Msa0526450:intron | 35.0% |
| AAAGTGTGGAGAAATTTGGA+GGG | + | chr3_4:80303710-80303729 | Msa0526450:intron | 35.0% | |
| ! | GATTCACTATCCTTTAAGGA+GGG | - | chr3_4:80303790-80303809 | None:intergenic | 35.0% |
| TGCAGAAAATCTACAAACAG+GGG | - | chr3_4:80303817-80303836 | None:intergenic | 35.0% | |
| GTGCAGAAAATCTACAAACA+GGG | - | chr3_4:80303818-80303837 | None:intergenic | 35.0% | |
| AGTGCAGAAAATCTACAAAC+AGG | - | chr3_4:80303819-80303838 | None:intergenic | 35.0% | |
| CCTGTCTGATCTTTAGTTAA+TGG | - | chr3_4:80303905-80303924 | None:intergenic | 35.0% | |
| CCATTAACTAAAGATCAGAC+AGG | + | chr3_4:80303902-80303921 | Msa0526450:intron | 35.0% | |
| !!! | TTTCAGGTTTTTCTCTGCTT+TGG | + | chr3_4:80304009-80304028 | Msa0526450:intron | 35.0% |
| TGAAATAAAGAGATGGGAGT+GGG | - | chr3_4:80304131-80304150 | None:intergenic | 35.0% | |
| ATGAAATAAAGAGATGGGAG+TGG | - | chr3_4:80304132-80304151 | None:intergenic | 35.0% | |
| ATATGCATGCAACTTGGTTA+AGG | - | chr3_4:80304254-80304273 | None:intergenic | 35.0% | |
| GTATGAATATGCATGCAACT+TGG | - | chr3_4:80304260-80304279 | None:intergenic | 35.0% | |
| ATATGCATGCAACTTGGTTA+AGG | - | chr3_4:80304254-80304273 | None:intergenic | 35.0% | |
| TAGAGAATATGCATGCAACT+TGG | - | chr3_4:80304382-80304401 | None:intergenic | 35.0% | |
| TCTATTGTTGCCATGATTGT+GGG | + | chr3_4:80304398-80304417 | Msa0526450:CDS | 35.0% | |
| ATTGTGCACGTTATAGTGAA+CGG | + | chr3_4:80304517-80304536 | Msa0526450:intron | 35.0% | |
| !!! | TGTTACTTTTTACCGGCAAT+TGG | + | chr3_4:80304600-80304619 | Msa0526450:intron | 35.0% |
| CATATTGATGAACCAATTGC+CGG | - | chr3_4:80304615-80304634 | None:intergenic | 35.0% | |
| ATCACCTAGAATAACCAGAA+GGG | - | chr3_4:80304950-80304969 | None:intergenic | 35.0% | |
| TATCACCTAGAATAACCAGA+AGG | - | chr3_4:80304951-80304970 | None:intergenic | 35.0% | |
| ! | AGACACCTATTGATTGTTTC+AGG | + | chr3_4:80305000-80305019 | Msa0526450:three_prime_UTR | 35.0% |
| AGTCAGAAATCCAAACTTAG+GGG | - | chr3_4:80305130-80305149 | None:intergenic | 35.0% | |
| CAGTCAGAAATCCAAACTTA+GGG | - | chr3_4:80305131-80305150 | None:intergenic | 35.0% | |
| TCAGTCAGAAATCCAAACTT+AGG | - | chr3_4:80305132-80305151 | None:intergenic | 35.0% | |
| ACATATTTCTTGGCCAAACT+TGG | - | chr3_4:80305315-80305334 | None:intergenic | 35.0% | |
| TAATCCCAACGTTTACCAAG+TGG | - | chr3_4:80298749-80298768 | None:intergenic | 40.0% | |
| AAGGCAAAGTCTTTATTGGC+CGG | - | chr3_4:80298891-80298910 | None:intergenic | 40.0% | |
| ACCGTAATTCCTTCATTCCT+TGG | + | chr3_4:80299008-80299027 | Msa0526450:intron | 40.0% | |
| TCAATCCAACCAAGGAATGA+AGG | - | chr3_4:80299020-80299039 | None:intergenic | 40.0% | |
| TCTCTCAGATCTATCCATCT+AGG | + | chr3_4:80299114-80299133 | Msa0526450:intron | 40.0% | |
| CTCTCAGATCTATCCATCTA+GGG | + | chr3_4:80299115-80299134 | Msa0526450:intron | 40.0% | |
| ATAGATTCCGGTAATTCTGC+CGG | - | chr3_4:80299228-80299247 | None:intergenic | 40.0% | |
| TGATCTCATGAGAACTATCC+AGG | + | chr3_4:80299255-80299274 | Msa0526450:CDS | 40.0% | |
| ! | AAGAGTGATGAAAGTGTGGT+TGG | - | chr3_4:80299302-80299321 | None:intergenic | 40.0% |
| CATCTAAAGATTGCTCGATG+TGG | - | chr3_4:80300002-80300021 | None:intergenic | 40.0% | |
| CACATCGAGCAATCTTTAGA+TGG | + | chr3_4:80300000-80300019 | Msa0526450:intron | 40.0% | |
| ! | CCGCTTGTGATCTATCATTT+TGG | + | chr3_4:80300420-80300439 | Msa0526450:intron | 40.0% |
| TCAGGTCATTGAACTGACAA+GGG | - | chr3_4:80300446-80300465 | None:intergenic | 40.0% | |
| ATCAGGTCATTGAACTGACA+AGG | - | chr3_4:80300447-80300466 | None:intergenic | 40.0% | |
| ! | GCAATCAACTGAAAGTGCAT+TGG | - | chr3_4:80300500-80300519 | None:intergenic | 40.0% |
| CGAAGCAAGTATGATACACA+TGG | - | chr3_4:80300637-80300656 | None:intergenic | 40.0% | |
| TCAGTACAGAGGCAAAATTC+AGG | - | chr3_4:80300828-80300847 | None:intergenic | 40.0% | |
| ! | TGAATTTTGCCTCTGTACTG+AGG | + | chr3_4:80300827-80300846 | Msa0526450:CDS | 40.0% |
| ATATCTGCAAATGCTGCCAT+GGG | + | chr3_4:80300895-80300914 | Msa0526450:intron | 40.0% | |
| CTACTCTTGAAGAAAACCCA+TGG | - | chr3_4:80300914-80300933 | None:intergenic | 40.0% | |
| ! | CATGGGTTTTCTTCAAGAGT+AGG | + | chr3_4:80300912-80300931 | Msa0526450:intron | 40.0% |
| ! | GGTTTTCTTCAAGAGTAGGT+TGG | + | chr3_4:80300916-80300935 | Msa0526450:intron | 40.0% |
| AGTATAGATCAGATGAGGGT+AGG | - | chr3_4:80301251-80301270 | None:intergenic | 40.0% | |
| !! | GACGTTTTGAGCATGTATTG+AGG | - | chr3_4:80301300-80301319 | None:intergenic | 40.0% |
| CGTACTAGATGAGTTAGACT+TGG | - | chr3_4:80301391-80301410 | None:intergenic | 40.0% | |
| TGGATGGCAAAATGTCAACA+CGG | - | chr3_4:80301463-80301482 | None:intergenic | 40.0% | |
| ! | CATTTTCCTATTAGCTAGGG+CGG | + | chr3_4:80301523-80301542 | Msa0526450:intron | 40.0% |
| TGTACACCATAGGATTCAAG+CGG | - | chr3_4:80301615-80301634 | None:intergenic | 40.0% | |
| ! | CAGGTATTGTGAGTGATAGA+GGG | - | chr3_4:80301641-80301660 | None:intergenic | 40.0% |
| TAAGAGTGATCTTCATGTCG+TGG | + | chr3_4:80301711-80301730 | Msa0526450:intron | 40.0% | |
| GACCGATACACTCAATCATA+TGG | - | chr3_4:80301831-80301850 | None:intergenic | 40.0% | |
| !! | TAGATGAGAGGTGGATTGTA+CGG | - | chr3_4:80301880-80301899 | None:intergenic | 40.0% |
| CTTTCCTCGTTTCCTTTCAA+GGG | + | chr3_4:80301904-80301923 | Msa0526450:intron | 40.0% | |
| ! | CTCATTTATAGCCTTACCTC+TGG | + | chr3_4:80301937-80301956 | Msa0526450:intron | 40.0% |
| ATAAGTCAGTGTTGCCTAAC+TGG | + | chr3_4:80302011-80302030 | Msa0526450:intron | 40.0% | |
| GGTGAAAAATAAGGCCAGTT+AGG | - | chr3_4:80302028-80302047 | None:intergenic | 40.0% | |
| TATTGAAGAGAAAAGGGGGA+GGG | - | chr3_4:80302049-80302068 | None:intergenic | 40.0% | |
| ATATTGAAGAGAAAAGGGGG+AGG | - | chr3_4:80302050-80302069 | None:intergenic | 40.0% | |
| ACAACAGAGACTCAAATTGC+GGG | - | chr3_4:80302181-80302200 | None:intergenic | 40.0% | |
| ACAATGTTGTGGAGACAAAG+CGG | - | chr3_4:80302219-80302238 | None:intergenic | 40.0% | |
| CATACACTGGTACAATGTTG+TGG | - | chr3_4:80302230-80302249 | None:intergenic | 40.0% | |
| CACAACATTGTACCAGTGTA+TGG | + | chr3_4:80302228-80302247 | Msa0526450:intron | 40.0% | |
| CATCAACAAGAACCATACAC+TGG | - | chr3_4:80302243-80302262 | None:intergenic | 40.0% | |
| !!! | AGATTTTTAGCAACCGCCAT+AGG | + | chr3_4:80302344-80302363 | Msa0526450:intron | 40.0% |
| ATCCCTTTGCAAATAGCCTA+TGG | - | chr3_4:80302363-80302382 | None:intergenic | 40.0% | |
| ! | CTGCAAAGAACTTTTGCCTT+TGG | + | chr3_4:80302500-80302519 | Msa0526450:intron | 40.0% |
| GAGAGTAATACCAGAGATAG+AGG | - | chr3_4:80302589-80302608 | None:intergenic | 40.0% | |
| TTACTCTCTCCCTTCAAAAC+CGG | + | chr3_4:80302601-80302620 | Msa0526450:intron | 40.0% | |
| TGTTCACCACATAATGGTCT+TGG | + | chr3_4:80302848-80302867 | Msa0526450:intron | 40.0% | |
| GTTCACCACATAATGGTCTT+GGG | + | chr3_4:80302849-80302868 | Msa0526450:intron | 40.0% | |
| TATAGTGCTCTAACGGTAAG+TGG | + | chr3_4:80303043-80303062 | Msa0526450:intron | 40.0% | |
| TAACGGTAAGTGGCCTAATT+AGG | + | chr3_4:80303053-80303072 | Msa0526450:intron | 40.0% | |
| GTGGCCTAATTAGGAATGTT+TGG | + | chr3_4:80303062-80303081 | Msa0526450:intron | 40.0% | |
| GCGTCCAAACATTCCTAATT+AGG | - | chr3_4:80303069-80303088 | None:intergenic | 40.0% | |
| ATTAGGAATGTTTGGACGCT+AGG | + | chr3_4:80303070-80303089 | Msa0526450:intron | 40.0% | |
| TTAGGAATGTTTGGACGCTA+GGG | + | chr3_4:80303071-80303090 | Msa0526450:intron | 40.0% | |
| !!! | GGAAACCTGTGGTTTTAAAC+TGG | + | chr3_4:80303178-80303197 | Msa0526450:intron | 40.0% |
| GGATCATTTCTGTTGGCAAT+TGG | + | chr3_4:80303218-80303237 | Msa0526450:intron | 40.0% | |
| CTGTTGGCAATTGGTTAACA+AGG | + | chr3_4:80303227-80303246 | Msa0526450:intron | 40.0% | |
| ! | ACCATGGAGTTTCTTTTCAC+CGG | + | chr3_4:80303298-80303317 | Msa0526450:intron | 40.0% |
| ! | GAAAATACACTTTCAGGTGG+TGG | + | chr3_4:80303386-80303405 | Msa0526450:intron | 40.0% |
| ! | TCGTTTGGGGTTTGTTTGTA+GGG | + | chr3_4:80303617-80303636 | Msa0526450:intron | 40.0% |
| GATTAGGATTCCGTAACTGT+GGG | + | chr3_4:80303639-80303658 | Msa0526450:intron | 40.0% | |
| AACATAGAGACCCACAGTTA+CGG | - | chr3_4:80303652-80303671 | None:intergenic | 40.0% | |
| TAACTGTGGGTCTCTATGTT+TGG | + | chr3_4:80303652-80303671 | Msa0526450:intron | 40.0% | |
| AACTGTGGGTCTCTATGTTT+GGG | + | chr3_4:80303653-80303672 | Msa0526450:intron | 40.0% | |
| ! | TCTATGTTTGGGGTGACTTT+AGG | + | chr3_4:80303664-80303683 | Msa0526450:intron | 40.0% |
| GATGAGAGAGATAGAGAGAA+AGG | + | chr3_4:80303753-80303772 | Msa0526450:intron | 40.0% | |
| AGAGAGATAGAGAGAAAGGT+AGG | + | chr3_4:80303757-80303776 | Msa0526450:intron | 40.0% | |
| ! | ACTATCCTTTAAGGAGGGAA+TGG | - | chr3_4:80303785-80303804 | None:intergenic | 40.0% |
| ! | GGATTCACTATCCTTTAAGG+AGG | - | chr3_4:80303791-80303810 | None:intergenic | 40.0% |
| CTGGGATTCACTATCCTTTA+AGG | - | chr3_4:80303794-80303813 | None:intergenic | 40.0% | |
| AAAATCTACAAACAGGGGCT+GGG | - | chr3_4:80303812-80303831 | None:intergenic | 40.0% | |
| !! | TCTCTGCTTTGGAAATTCAG+TGG | + | chr3_4:80304020-80304039 | Msa0526450:CDS | 40.0% |
| CTCTATTGTTGCCATGATTG+TGG | + | chr3_4:80304397-80304416 | Msa0526450:CDS | 40.0% | |
| TGTGGGAAGTGAGGAAATTT+CGG | + | chr3_4:80304415-80304434 | Msa0526450:CDS | 40.0% | |
| AGTCTTACGAGCAGTAAACA+AGG | - | chr3_4:80304472-80304491 | None:intergenic | 40.0% | |
| TTATTTGCAGACTCAGCACA+AGG | + | chr3_4:80304668-80304687 | Msa0526450:intron | 40.0% | |
| TCACCTAGAATAACCAGAAG+GGG | - | chr3_4:80304949-80304968 | None:intergenic | 40.0% | |
| CGGTTCCTGAAACAATCAAT+AGG | - | chr3_4:80305008-80305027 | None:intergenic | 40.0% | |
| ATCAAGCAGTCATATGTGTG+TGG | + | chr3_4:80305061-80305080 | Msa0526450:three_prime_UTR | 40.0% | |
| ! | TTGCATTTTCCCCCTAAGTT+TGG | + | chr3_4:80305117-80305136 | Msa0526450:three_prime_UTR | 40.0% |
| GTCAGAAATCCAAACTTAGG+GGG | - | chr3_4:80305129-80305148 | None:intergenic | 40.0% | |
| ! | GGGTTTTGCAATACTTGGAA+CGG | - | chr3_4:80305259-80305278 | None:intergenic | 40.0% |
| TATTTCTTGGCCAAACTTGG+CGG | - | chr3_4:80305312-80305331 | None:intergenic | 40.0% | |
| CTTACAAACGACGCATCGTA+GGG | - | chr3_4:80298800-80298819 | None:intergenic | 45.0% | |
| TCTTACAAACGACGCATCGT+AGG | - | chr3_4:80298801-80298820 | None:intergenic | 45.0% | |
| GTCGTTTGTAAGAGTGAGTC+AGG | + | chr3_4:80298808-80298827 | Msa0526450:five_prime_UTR | 45.0% | |
| !!! | GACTTTTTCACTTGGCTTCC+TGG | - | chr3_4:80298862-80298881 | None:intergenic | 45.0% |
| TTCTTCTTCTTCTTTGCCGG+AGG | - | chr3_4:80299152-80299171 | None:intergenic | 45.0% | |
| GGCAGAATTACCGGAATCTA+TGG | + | chr3_4:80299227-80299246 | Msa0526450:CDS | 45.0% | |
| GATCAGTGTGCCATAGATTC+CGG | - | chr3_4:80299240-80299259 | None:intergenic | 45.0% | |
| !! | GTGTGGTTGGTTTGCTTACA+TGG | - | chr3_4:80299289-80299308 | None:intergenic | 45.0% |
| ! | CAGATTGCTGCTTATCCTTG+TGG | + | chr3_4:80299396-80299415 | Msa0526450:intron | 45.0% |
| ! | ATTGCTGCTTATCCTTGTGG+TGG | + | chr3_4:80299399-80299418 | Msa0526450:CDS | 45.0% |
| ATGGATGACATACCACCACA+AGG | - | chr3_4:80299414-80299433 | None:intergenic | 45.0% | |
| ACACCTTTGATCAGAGGAGT+TGG | - | chr3_4:80299669-80299688 | None:intergenic | 45.0% | |
| ! | ACTCCTCTGATCAAAGGTGT+CGG | + | chr3_4:80299669-80299688 | Msa0526450:intron | 45.0% |
| TGATCGTAATGTGCTTCCCT+TGG | + | chr3_4:80300197-80300216 | Msa0526450:intron | 45.0% | |
| ! | TGATAAGCTCAAGGTGCCAA+GGG | - | chr3_4:80300216-80300235 | None:intergenic | 45.0% |
| TGAGAAGGCTGATAAGCTCA+AGG | - | chr3_4:80300225-80300244 | None:intergenic | 45.0% | |
| TGACTATCGCATGACTGAGA+AGG | - | chr3_4:80300240-80300259 | None:intergenic | 45.0% | |
| TTCTCAGTCATGCGATAGTC+AGG | + | chr3_4:80300239-80300258 | Msa0526450:intron | 45.0% | |
| TCTCAGTCATGCGATAGTCA+GGG | + | chr3_4:80300240-80300259 | Msa0526450:intron | 45.0% | |
| GATAGTACACTGCGTCTGTT+TGG | + | chr3_4:80300314-80300333 | Msa0526450:intron | 45.0% | |
| CGGAGACAGGTTATACAAGT+TGG | - | chr3_4:80300403-80300422 | None:intergenic | 45.0% | |
| GATATCTGCAAATGCTGCCA+TGG | + | chr3_4:80300894-80300913 | Msa0526450:intron | 45.0% | |
| AAGGCTTAGAGGTCAGTGTT+TGG | - | chr3_4:80301196-80301215 | None:intergenic | 45.0% | |
| GGATGGCAAAATGTCAACAC+GGG | - | chr3_4:80301462-80301481 | None:intergenic | 45.0% | |
| GTCATCGTAGACTGTAAGAC+CGG | - | chr3_4:80301504-80301523 | None:intergenic | 45.0% | |
| TACACCATAGGATTCAAGCG+GGG | - | chr3_4:80301613-80301632 | None:intergenic | 45.0% | |
| GTACACCATAGGATTCAAGC+GGG | - | chr3_4:80301614-80301633 | None:intergenic | 45.0% | |
| TAGAGGGAGATGTACACCAT+AGG | - | chr3_4:80301625-80301644 | None:intergenic | 45.0% | |
| ! | GCAGGTATTGTGAGTGATAG+AGG | - | chr3_4:80301642-80301661 | None:intergenic | 45.0% |
| ! | ATCTTCATGTCGTGGCTTTG+AGG | + | chr3_4:80301719-80301738 | Msa0526450:intron | 45.0% |
| TTAACACTGGGAGTTCACGA+GGG | - | chr3_4:80301768-80301787 | None:intergenic | 45.0% | |
| ATTAACACTGGGAGTTCACG+AGG | - | chr3_4:80301769-80301788 | None:intergenic | 45.0% | |
| GAAAGGAGATAGATGAGAGG+TGG | - | chr3_4:80301889-80301908 | None:intergenic | 45.0% | |
| GAGGAAAGGAGATAGATGAG+AGG | - | chr3_4:80301892-80301911 | None:intergenic | 45.0% | |
| CCTTGAAAGGAAACGAGGAA+AGG | - | chr3_4:80301906-80301925 | None:intergenic | 45.0% | |
| CCTTTCCTCGTTTCCTTTCA+AGG | + | chr3_4:80301903-80301922 | Msa0526450:intron | 45.0% | |
| AACTGTCTGAACCAGAGGTA+AGG | - | chr3_4:80301951-80301970 | None:intergenic | 45.0% | |
| AAGGGGGAGGGTGAAAAATA+AGG | - | chr3_4:80302037-80302056 | None:intergenic | 45.0% | |
| ! | TTCTGTGATTGGTGACCCAA+TGG | + | chr3_4:80302091-80302110 | Msa0526450:intron | 45.0% |
| ! | TCTGTGATTGGTGACCCAAT+GGG | + | chr3_4:80302092-80302111 | Msa0526450:intron | 45.0% |
| GACCAATTGCTAGTCCCATT+GGG | - | chr3_4:80302109-80302128 | None:intergenic | 45.0% | |
| AGACCAATTGCTAGTCCCAT+TGG | - | chr3_4:80302110-80302129 | None:intergenic | 45.0% | |
| ! | ACTAGCAATTGGTCTGTTCC+TGG | + | chr3_4:80302115-80302134 | Msa0526450:intron | 45.0% |
| CACCAGCATCAGAATGTGAT+GGG | + | chr3_4:80302140-80302159 | Msa0526450:intron | 45.0% | |
| ATCCCATCACATTCTGATGC+TGG | - | chr3_4:80302145-80302164 | None:intergenic | 45.0% | |
| ! | ATCAGAATGTGATGGGATCG+CGG | + | chr3_4:80302147-80302166 | Msa0526450:intron | 45.0% |
| TGTGGAGACAAAGCGGAAAT+TGG | - | chr3_4:80302212-80302231 | None:intergenic | 45.0% | |
| CCTTTGCAAATAGCCTATGG+CGG | - | chr3_4:80302360-80302379 | None:intergenic | 45.0% | |
| CGCCATAGGCTATTTGCAAA+GGG | + | chr3_4:80302358-80302377 | Msa0526450:intron | 45.0% | |
| ATGGTACCACAACTCAATGG+CGG | - | chr3_4:80302388-80302407 | None:intergenic | 45.0% | |
| CCTATGGTACCACAACTCAA+TGG | - | chr3_4:80302391-80302410 | None:intergenic | 45.0% | |
| ! | CCATTGAGTTGTGGTACCAT+AGG | + | chr3_4:80302388-80302407 | Msa0526450:intron | 45.0% |
| GCCGCAATGGTGTGTTTATA+TGG | + | chr3_4:80302410-80302429 | Msa0526450:intron | 45.0% | |
| ACCAGAGATAGAGGACATGT+GGG | - | chr3_4:80302580-80302599 | None:intergenic | 45.0% | |
| TACCAGAGATAGAGGACATG+TGG | - | chr3_4:80302581-80302600 | None:intergenic | 45.0% | |
| TGTCAATTCATCCAACCAGC+CGG | - | chr3_4:80302623-80302642 | None:intergenic | 45.0% | |
| GATAGAACCTTAGAGATGGG+AGG | - | chr3_4:80302722-80302741 | None:intergenic | 45.0% | |
| AAAGAGGAAGTGAAGAGGGA+GGG | - | chr3_4:80302766-80302785 | None:intergenic | 45.0% | |
| TAAAGAGGAAGTGAAGAGGG+AGG | - | chr3_4:80302767-80302786 | None:intergenic | 45.0% | |
| TGAGAAGGTGACATAGCAGA+GGG | - | chr3_4:80302822-80302841 | None:intergenic | 45.0% | |
| ATGAGAAGGTGACATAGCAG+AGG | - | chr3_4:80302823-80302842 | None:intergenic | 45.0% | |
| AGGTGACTGGATGAGAATGT+GGG | - | chr3_4:80302903-80302922 | None:intergenic | 45.0% | |
| TAGGTGACTGGATGAGAATG+TGG | - | chr3_4:80302904-80302923 | None:intergenic | 45.0% | |
| !! | CTGGATTTTGAGAAAGCTGG+AGG | + | chr3_4:80303197-80303216 | Msa0526450:intron | 45.0% |
| AGCTGGAGGATCATTTCTGT+TGG | + | chr3_4:80303211-80303230 | Msa0526450:intron | 45.0% | |
| AGAATGGAGAATCTGCACCA+TGG | + | chr3_4:80303282-80303301 | Msa0526450:intron | 45.0% | |
| ACCGGTGAAAAGAAACTCCA+TGG | - | chr3_4:80303302-80303321 | None:intergenic | 45.0% | |
| CTACAAACAAACCCCAAACG+AGG | - | chr3_4:80303618-80303637 | None:intergenic | 45.0% | |
| ! | CTCGTTTGGGGTTTGTTTGT+AGG | + | chr3_4:80303616-80303635 | Msa0526450:intron | 45.0% |
| ! | GGGGTTTGTTTGTAGGGATT+AGG | + | chr3_4:80303623-80303642 | Msa0526450:intron | 45.0% |
| GGATTAGGATTCCGTAACTG+TGG | + | chr3_4:80303638-80303657 | Msa0526450:intron | 45.0% | |
| ACTGTGGGTCTCTATGTTTG+GGG | + | chr3_4:80303654-80303673 | Msa0526450:intron | 45.0% | |
| AGGTACCATTCCCTCCTTAA+AGG | + | chr3_4:80303777-80303796 | Msa0526450:intron | 45.0% | |
| GAAAATCTACAAACAGGGGC+TGG | - | chr3_4:80303813-80303832 | None:intergenic | 45.0% | |
| TTGCAACAGAAAGCGAGTTG+AGG | - | chr3_4:80304046-80304065 | None:intergenic | 45.0% | |
| TAAAGAGATGGGAGTGGGAA+GGG | - | chr3_4:80304126-80304145 | None:intergenic | 45.0% | |
| ATAAAGAGATGGGAGTGGGA+AGG | - | chr3_4:80304127-80304146 | None:intergenic | 45.0% | |
| TTCCTCACTTCCCACAATCA+TGG | - | chr3_4:80304411-80304430 | None:intergenic | 45.0% | |
| GACTCAGCACAAGGTTGAAA+TGG | + | chr3_4:80304677-80304696 | Msa0526450:intron | 45.0% | |
| GTTGAAATGGACAAGCGTGA+CGG | + | chr3_4:80304690-80304709 | Msa0526450:CDS | 45.0% | |
| TTGAAATGGACAAGCGTGAC+GGG | + | chr3_4:80304691-80304710 | Msa0526450:CDS | 45.0% | |
| AGGAACTGGTTGATCAATGC+GGG | - | chr3_4:80304766-80304785 | None:intergenic | 45.0% | |
| GAGGAACTGGTTGATCAATG+CGG | - | chr3_4:80304767-80304786 | None:intergenic | 45.0% | |
| AACCAGTTCCTCCTTCTGTT+GGG | + | chr3_4:80304775-80304794 | Msa0526450:CDS | 45.0% | |
| TATGCACCACAACCAGCATA+TGG | + | chr3_4:80304798-80304817 | Msa0526450:CDS | 45.0% | |
| ATGCACCACAACCAGCATAT+GGG | + | chr3_4:80304799-80304818 | Msa0526450:CDS | 45.0% | |
| CCATAATTCTGCCCATATGC+TGG | - | chr3_4:80304813-80304832 | None:intergenic | 45.0% | |
| CCAGCATATGGGCAGAATTA+TGG | + | chr3_4:80304810-80304829 | Msa0526450:CDS | 45.0% | |
| ! | ATCCCCCTTCTGGTTATTCT+AGG | + | chr3_4:80304943-80304962 | Msa0526450:CDS | 45.0% |
| CACCTAGAATAACCAGAAGG+GGG | - | chr3_4:80304948-80304967 | None:intergenic | 45.0% | |
| ! | ATCGCGGGTTTTGCAATACT+TGG | - | chr3_4:80305264-80305283 | None:intergenic | 45.0% |
| AGAGTGAGTCAGGTCAGCTA+TGG | + | chr3_4:80298818-80298837 | Msa0526450:five_prime_UTR | 50.0% | |
| ! | GAAAGAGAGAGAAAGCGCGT+GGG | - | chr3_4:80298967-80298986 | None:intergenic | 50.0% |
| ! | AGAAAGAGAGAGAAAGCGCG+TGG | - | chr3_4:80298968-80298987 | None:intergenic | 50.0% |
| CGGTGTAGAGTAGAAGACAC+TGG | - | chr3_4:80298992-80299011 | None:intergenic | 50.0% | |
| GGAGAAGTAGCAACCCTAGA+TGG | - | chr3_4:80299131-80299150 | None:intergenic | 50.0% | |
| ! | TAGGGTTGCTACTTCTCCTC+CGG | + | chr3_4:80299133-80299152 | Msa0526450:five_prime_UTR | 50.0% |
| TGCAACTCCGGCAGAATTAC+CGG | + | chr3_4:80299218-80299237 | Msa0526450:CDS | 50.0% | |
| !! | GCTTACATGGAGTATCGACC+TGG | - | chr3_4:80299276-80299295 | None:intergenic | 50.0% |
| GCACCAACTCCTCTGATCAA+AGG | + | chr3_4:80299663-80299682 | Msa0526450:intron | 50.0% | |
| ACACCGACACCTTTGATCAG+AGG | - | chr3_4:80299675-80299694 | None:intergenic | 50.0% | |
| ! | CTGATAAGCTCAAGGTGCCA+AGG | - | chr3_4:80300217-80300236 | None:intergenic | 50.0% |
| GATAGATCACAAGCGGAGAC+AGG | - | chr3_4:80300416-80300435 | None:intergenic | 50.0% | |
| TCCAGATACACATGCTGTGC+TGG | + | chr3_4:80300762-80300781 | Msa0526450:intron | 50.0% | |
| ACCAGCACAGCATGTGTATC+TGG | - | chr3_4:80300766-80300785 | None:intergenic | 50.0% | |
| TTCAAGCGGGGTGGATGATA+TGG | - | chr3_4:80301601-80301620 | None:intergenic | 50.0% | |
| AGAGGTGAAAGTCCGACTAG+AGG | - | chr3_4:80301685-80301704 | None:intergenic | 50.0% | |
| AACGCCCTTGAAAGGAAACG+AGG | - | chr3_4:80301911-80301930 | None:intergenic | 50.0% | |
| CCTTCAACTGTCTGAACCAG+AGG | - | chr3_4:80301956-80301975 | None:intergenic | 50.0% | |
| ! | CCTCTGGTTCAGACAGTTGA+AGG | + | chr3_4:80301953-80301972 | Msa0526450:intron | 50.0% |
| ! | GACCCAATGGGACTAGCAAT+TGG | + | chr3_4:80302104-80302123 | Msa0526450:intron | 50.0% |
| GCACCAGCATCAGAATGTGA+TGG | + | chr3_4:80302139-80302158 | Msa0526450:intron | 50.0% | |
| CCGCCATAGGCTATTTGCAA+AGG | + | chr3_4:80302357-80302376 | Msa0526450:intron | 50.0% | |
| AAACACACCATTGCGGCCTA+TGG | - | chr3_4:80302407-80302426 | None:intergenic | 50.0% | |
| TCAAGGGAACTGACCCTCTT+GGG | - | chr3_4:80302533-80302552 | None:intergenic | 50.0% | |
| TTCAAGGGAACTGACCCTCT+TGG | - | chr3_4:80302534-80302553 | None:intergenic | 50.0% | |
| !!! | TCCAACCAGCCGGTTTTGAA+GGG | - | chr3_4:80302613-80302632 | None:intergenic | 50.0% |
| !! | ATCCAACCAGCCGGTTTTGA+AGG | - | chr3_4:80302614-80302633 | None:intergenic | 50.0% |
| TATCCCTCCTCCCATCTCTA+AGG | + | chr3_4:80302712-80302731 | Msa0526450:intron | 50.0% | |
| GAACCTTAGAGATGGGAGGA+GGG | - | chr3_4:80302718-80302737 | None:intergenic | 50.0% | |
| AGAACCTTAGAGATGGGAGG+AGG | - | chr3_4:80302719-80302738 | None:intergenic | 50.0% | |
| AAGAGGAAGTGAAGAGGGAG+GGG | - | chr3_4:80302765-80302784 | None:intergenic | 50.0% | |
| AGCTGCCCAAGACCATTATG+TGG | - | chr3_4:80302857-80302876 | None:intergenic | 50.0% | |
| ATGAGAATGTGGGCCCAAAC+AGG | - | chr3_4:80302893-80302912 | None:intergenic | 50.0% | |
| TGCCATGATTGTGGGAAGTG+AGG | + | chr3_4:80304406-80304425 | Msa0526450:CDS | 50.0% | |
| GGGAAGTGAGGAAATTTCGG+AGG | + | chr3_4:80304418-80304437 | Msa0526450:CDS | 50.0% | |
| ! | ACAAGCGTGACGGGAAGTTT+GGG | + | chr3_4:80304700-80304719 | Msa0526450:CDS | 50.0% |
| !! | ATGCGGGACATTTGCTGTAC+AGG | - | chr3_4:80304750-80304769 | None:intergenic | 50.0% |
| CAACCAGTTCCTCCTTCTGT+TGG | + | chr3_4:80304774-80304793 | Msa0526450:CDS | 50.0% | |
| TACCCAACAGAAGGAGGAAC+TGG | - | chr3_4:80304780-80304799 | None:intergenic | 50.0% | |
| TGTGGTGCATACCCAACAGA+AGG | - | chr3_4:80304789-80304808 | None:intergenic | 50.0% | |
| ! | TTCTGCCCATATGCTGGTTG+TGG | - | chr3_4:80304807-80304826 | None:intergenic | 50.0% |
| TTGTGGAGGATAAGCAGCAG+GGG | - | chr3_4:80304886-80304905 | None:intergenic | 50.0% | |
| GTTGTGGAGGATAAGCAGCA+GGG | - | chr3_4:80304887-80304906 | None:intergenic | 50.0% | |
| TGTTGTGGAGGATAAGCAGC+AGG | - | chr3_4:80304888-80304907 | None:intergenic | 50.0% | |
| GCTGCTTATCCTCCACAACA+AGG | + | chr3_4:80304888-80304907 | Msa0526450:CDS | 50.0% | |
| TTGTGGAGGATAAGCAGCAG+GGG | - | chr3_4:80304886-80304905 | None:intergenic | 50.0% | |
| CTTGTGGAGGATAAGCAGCA+GGG | - | chr3_4:80304920-80304939 | None:intergenic | 50.0% | |
| GTTACATGCCCTGCAGTGGT+AGG | + | chr3_4:80300784-80300803 | Msa0526450:CDS | 55.0% | |
| TCTCCACACCTACCACTGCA+GGG | - | chr3_4:80300795-80300814 | None:intergenic | 55.0% | |
| TTCTCCACACCTACCACTGC+AGG | - | chr3_4:80300796-80300815 | None:intergenic | 55.0% | |
| ACGGTACCGCCCTAGCTAAT+AGG | - | chr3_4:80301532-80301551 | None:intergenic | 55.0% | |
| AAGCGGGGTGGATGATATGG+AGG | - | chr3_4:80301598-80301617 | None:intergenic | 55.0% | |
| TCCACCCCGCTTGAATCCTA+TGG | + | chr3_4:80301606-80301625 | Msa0526450:intron | 55.0% | |
| ACCATAGGATTCAAGCGGGG+TGG | - | chr3_4:80301610-80301629 | None:intergenic | 55.0% | |
| CATTCTGATGCTGGTGCACC+AGG | - | chr3_4:80302136-80302155 | None:intergenic | 55.0% | |
| ! | GGATGTCCGCCATTGAGTTG+TGG | + | chr3_4:80302379-80302398 | Msa0526450:intron | 55.0% |
| TGTGGTACCATAGGCCGCAA+TGG | + | chr3_4:80302397-80302416 | Msa0526450:intron | 55.0% | |
| CTTTGGCAATCCGCCCAAGA+GGG | + | chr3_4:80302517-80302536 | Msa0526450:intron | 55.0% | |
| GGGTCAGTTCCCTTGAAGTC+AGG | + | chr3_4:80302537-80302556 | Msa0526450:intron | 55.0% | |
| TCCCTTGAAGTCAGGCAGCT+CGG | + | chr3_4:80302545-80302564 | Msa0526450:intron | 55.0% | |
| AGAGGACATGTGGGCCAAGA+AGG | - | chr3_4:80302571-80302590 | None:intergenic | 55.0% | |
| GCCCACATGTCCTCTATCTC+TGG | + | chr3_4:80302576-80302595 | Msa0526450:intron | 55.0% | |
| TCTCTCCCTTCAAAACCGGC+TGG | + | chr3_4:80302605-80302624 | Msa0526450:intron | 55.0% | |
| TCCCTTCAAAACCGGCTGGT+TGG | + | chr3_4:80302609-80302628 | Msa0526450:intron | 55.0% | |
| AGAGGAAGTGAAGAGGGAGG+GGG | - | chr3_4:80302764-80302783 | None:intergenic | 55.0% | |
| AGGTGACATAGCAGAGGGTG+AGG | - | chr3_4:80302817-80302836 | None:intergenic | 55.0% | |
| ! | GACAAGCGTGACGGGAAGTT+TGG | + | chr3_4:80304699-80304718 | Msa0526450:CDS | 55.0% |
| !! | CGGGACATTTGCTGTACAGG+AGG | - | chr3_4:80304747-80304766 | None:intergenic | 55.0% |
| GGTGCATACCCAACAGAAGG+AGG | - | chr3_4:80304786-80304805 | None:intergenic | 55.0% | |
| ATAGCCCTGAGCTGGTGGTT+GGG | - | chr3_4:80304847-80304866 | None:intergenic | 55.0% | |
| TGTGGAGGATAAGCAGCAGG+GGG | - | chr3_4:80304885-80304904 | None:intergenic | 55.0% | |
| ! | GGGGGATATCCTTGTTGTGG+AGG | - | chr3_4:80304900-80304919 | None:intergenic | 55.0% |
| GCAGGGGGATATCCTTGTTG+TGG | - | chr3_4:80304903-80304922 | None:intergenic | 55.0% | |
| TGTGGAGGATAAGCAGCAGG+GGG | - | chr3_4:80304885-80304904 | None:intergenic | 55.0% | |
| CCTTGTGGAGGATAAGCAGC+AGG | - | chr3_4:80304921-80304940 | None:intergenic | 55.0% | |
| ! | CCTGCTGCTTATCCTCCACA+AGG | + | chr3_4:80304885-80304904 | Msa0526450:CDS | 55.0% |
| GAAGGGGGATATCCTTGTGG+AGG | - | chr3_4:80304933-80304952 | None:intergenic | 55.0% | |
| CCAGAAGGGGGATATCCTTG+TGG | - | chr3_4:80304936-80304955 | None:intergenic | 55.0% | |
| CCACAAGGATATCCCCCTTC+TGG | + | chr3_4:80304933-80304952 | Msa0526450:CDS | 55.0% | |
| ! | AGAGAGAAAGCGCGTGGGTG+GGG | - | chr3_4:80298962-80298981 | None:intergenic | 60.0% |
| ! | GAGAGAGAAAGCGCGTGGGT+GGG | - | chr3_4:80298963-80298982 | None:intergenic | 60.0% |
| ! | AGAGAGAGAAAGCGCGTGGG+TGG | - | chr3_4:80298964-80298983 | None:intergenic | 60.0% |
| GCTGGTTACATGCCCTGCAG+TGG | + | chr3_4:80300780-80300799 | Msa0526450:CDS | 60.0% | |
| ATGCCCTGCAGTGGTAGGTG+TGG | + | chr3_4:80300789-80300808 | Msa0526450:CDS | 60.0% | |
| !! | CCTCTTGGGCGGATTGCCAA+AGG | - | chr3_4:80302519-80302538 | None:intergenic | 60.0% |
| CCTTTGGCAATCCGCCCAAG+AGG | + | chr3_4:80302516-80302535 | Msa0526450:intron | 60.0% | |
| AGGGAACTGACCCTCTTGGG+CGG | - | chr3_4:80302530-80302549 | None:intergenic | 60.0% | |
| GCCGAGCTGCCTGACTTCAA+GGG | - | chr3_4:80302549-80302568 | None:intergenic | 60.0% | |
| TAGGGTGTGTGCGTGCATGC+AGG | + | chr3_4:80304571-80304590 | Msa0526450:intron | 60.0% | |
| GTTTGGGCCGCAACCAGTGA+TGG | + | chr3_4:80304716-80304735 | Msa0526450:CDS | 60.0% | |
| ! | GGCACTGCCATCACTGGTTG+CGG | - | chr3_4:80304726-80304745 | None:intergenic | 60.0% |
| !! | ACAGGAGGCACTGCCATCAC+TGG | - | chr3_4:80304732-80304751 | None:intergenic | 60.0% |
| GATAGCCCTGAGCTGGTGGT+TGG | - | chr3_4:80304848-80304867 | None:intergenic | 60.0% | |
| AGCAGGGGGGTAACCAGTAG+CGG | - | chr3_4:80304871-80304890 | None:intergenic | 60.0% | |
| GTGGAGGATAAGCAGCAGGG+GGG | - | chr3_4:80304884-80304903 | None:intergenic | 60.0% | |
| AGGCTCACAGCCGCCAAGTT+TGG | + | chr3_4:80305299-80305318 | Msa0526450:three_prime_UTR | 60.0% | |
| ! | AGAAAGCGCGTGGGTGGGGT+GGG | - | chr3_4:80298958-80298977 | None:intergenic | 65.0% |
| GGCCGAGCTGCCTGACTTCA+AGG | - | chr3_4:80302550-80302569 | None:intergenic | 65.0% | |
| GTCAGGCAGCTCGGCCTTCT+TGG | + | chr3_4:80302554-80302573 | Msa0526450:intron | 65.0% | |
| TGAGCTGGTGGTTGGGCAGG+TGG | - | chr3_4:80304840-80304859 | None:intergenic | 65.0% | |
| ACCTGCCCAACCACCAGCTC+AGG | + | chr3_4:80304839-80304858 | Msa0526450:CDS | 65.0% | |
| CCTGCCCAACCACCAGCTCA+GGG | + | chr3_4:80304840-80304859 | Msa0526450:CDS | 65.0% | |
| ! | GTAGCGGGATAGCCCTGAGC+TGG | - | chr3_4:80304855-80304874 | None:intergenic | 65.0% |
| GCTCAGGGCTATCCCGCTAC+TGG | + | chr3_4:80304855-80304874 | Msa0526450:CDS | 65.0% | |
| GCAGGGGGGTAACCAGTAGC+GGG | - | chr3_4:80304870-80304889 | None:intergenic | 65.0% | |
| ! | GAAAGCGCGTGGGTGGGGTG+GGG | - | chr3_4:80298957-80298976 | None:intergenic | 70.0% |
| ! | GAGAAAGCGCGTGGGTGGGG+TGG | - | chr3_4:80298959-80298978 | None:intergenic | 70.0% |
| CCCTGAGCTGGTGGTTGGGC+AGG | - | chr3_4:80304843-80304862 | None:intergenic | 70.0% | |
| GCGGGATAGCCCTGAGCTGG+TGG | - | chr3_4:80304852-80304871 | None:intergenic | 70.0% | |
| ! | GCGCGTGGGTGGGGTGGGGT+GGG | - | chr3_4:80298953-80298972 | None:intergenic | 80.0% |
| ! | AGCGCGTGGGTGGGGTGGGG+TGG | - | chr3_4:80298954-80298973 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80298746 | 80305337 | 80298746 | ID=Msa0526450;Name=Msa0526450 |
| chr3_4 | mRNA | 80298746 | 80305337 | 80298746 | ID=Msa0526450-mRNA-1;Parent=Msa0526450;Name=Msa0526450-mRNA-1;_AED=0.07;_eAED=0.07;_QI=333|1|1|1|0.87|0.77|9|369|263 |
| chr3_4 | exon | 80298746 | 80299010 | 80298746 | ID=Msa0526450-mRNA-1:exon:24130;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80299122 | 80299289 | 80299122 | ID=Msa0526450-mRNA-1:exon:24131;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80299399 | 80299420 | 80299399 | ID=Msa0526450-mRNA-1:exon:24132;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80300630 | 80300686 | 80300630 | ID=Msa0526450-mRNA-1:exon:24133;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80300767 | 80300848 | 80300767 | ID=Msa0526450-mRNA-1:exon:24134;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80304015 | 80304110 | 80304015 | ID=Msa0526450-mRNA-1:exon:24135;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80304359 | 80304483 | 80304359 | ID=Msa0526450-mRNA-1:exon:24136;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80304574 | 80304592 | 80304574 | ID=Msa0526450-mRNA-1:exon:24137;Parent=Msa0526450-mRNA-1 |
| chr3_4 | exon | 80304678 | 80305337 | 80304678 | ID=Msa0526450-mRNA-1:exon:24138;Parent=Msa0526450-mRNA-1 |
| chr3_4 | five_prime_UTR | 80298746 | 80299010 | 80298746 | ID=Msa0526450-mRNA-1:five_prime_utr;Parent=Msa0526450-mRNA-1 |
| chr3_4 | five_prime_UTR | 80299122 | 80299189 | 80299122 | ID=Msa0526450-mRNA-1:five_prime_utr;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80299190 | 80299289 | 80299190 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80299399 | 80299420 | 80299399 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80300630 | 80300686 | 80300630 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80300767 | 80300848 | 80300767 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80304015 | 80304110 | 80304015 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80304359 | 80304483 | 80304359 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80304574 | 80304592 | 80304574 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | CDS | 80304678 | 80304968 | 80304678 | ID=Msa0526450-mRNA-1:cds;Parent=Msa0526450-mRNA-1 |
| chr3_4 | three_prime_UTR | 80304969 | 80305337 | 80304969 | ID=Msa0526450-mRNA-1:three_prime_utr;Parent=Msa0526450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
