AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085960 MtrunA17_Chr8g0387261 98.479 263 4 0 1 263 1 263 0.0 531
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085960 AT4G23470.1 72.308 260 51 5 4 263 3 241 2.77e-134 379
Msa1085960 AT1G63830.1 77.500 240 42 4 2 241 3 230 3.24e-132 373
Msa1085960 AT1G63830.2 77.500 240 42 4 2 241 3 230 3.24e-132 373
Msa1085960 AT1G63830.3 77.500 240 42 4 2 241 3 230 3.24e-132 373
Msa1085960 AT4G23470.3 77.273 220 43 2 4 223 3 215 2.97e-127 361
Msa1085960 AT5G41390.1 77.778 216 47 1 3 218 4 218 1.81e-124 355
Msa1085960 AT1G63830.5 79.897 194 27 4 48 241 1 182 1.12e-104 301
Msa1085960 AT1G63830.4 81.875 160 29 0 2 161 3 162 1.61e-97 283
Msa1085960 AT4G23470.2 71.845 206 37 5 58 263 1 185 2.77e-97 283
Msa1085960 AT5G41390.2 80.124 161 31 1 58 218 1 160 1.18e-91 270
Msa1085960 AT4G23470.4 78.313 166 29 2 58 223 1 159 1.90e-90 265

Find 131 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCAAAGTCTTTATATTAT+TGG 0.180155 7_2:-86970125 None:intergenic
CTATTATTGCACATATTTCT+TGG 0.218807 7_2:-86976538 None:intergenic
AGACACCTATTGATTGTTTC+AGG 0.231749 7_2:+86976215 Msa1085960:three_prime_UTR
AGCGCGTGGGTGGGGTGGGG+TGG 0.240516 7_2:-86970189 None:intergenic
GCGATTTAATGTGTGATATT+AGG 0.248116 7_2:+86976495 Msa1085960:three_prime_UTR
TTTGACTTCAATTTATATAT+TGG 0.254913 7_2:+86976404 Msa1085960:three_prime_UTR
GACAAGCGTGACGGGAAGTT+TGG 0.287119 7_2:+86975914 Msa1085960:CDS
TGTGGGAAGTGAGGAAATTT+CGG 0.298616 7_2:+86975630 Msa1085960:CDS
CCAGCATATGGGCAGAATTA+TGG 0.301754 7_2:+86976025 Msa1085960:CDS
CCCTGAGCTGGTGGTTGGGC+AGG 0.324739 7_2:-86976055 None:intergenic
TGCAACTCCGGCAGAATTAC+CGG 0.334750 7_2:+86970441 Msa1085960:CDS
AGGCTCACAGCCGCCAAGTT+TGG 0.341230 7_2:+86976515 Msa1085960:three_prime_UTR
ACCTTGACATATCATCATAA+AGG 0.341368 7_2:-86971893 None:intergenic
TTCTCAAATACTATCTTGTT+TGG 0.350032 7_2:+86975657 Msa1085960:CDS
GGCAGAATTACCGGAATCTA+TGG 0.355115 7_2:+86970450 Msa1085960:CDS
ACCTGCCCAACCACCAGCTC+AGG 0.357224 7_2:+86976054 Msa1085960:CDS
TTGTTTGGTTATGTGCAATA+TGG 0.357347 7_2:+86976440 Msa1085960:three_prime_UTR
GAAAGCGCGTGGGTGGGGTG+GGG 0.372529 7_2:-86970192 None:intergenic
AGAAAGCGCGTGGGTGGGGT+GGG 0.375901 7_2:-86970193 None:intergenic
GGTGTTTATATAATCTTGTT+TGG 0.382421 7_2:+86976425 Msa1085960:three_prime_UTR
TCTCTCAGATCTATCCATCT+AGG 0.387277 7_2:+86970349 Msa1085960:intron
GAAAATCAAATCAAATGAAA+TGG 0.391155 7_2:-86970160 None:intergenic
TCAGTCAGAAATCCAAACTT+AGG 0.399397 7_2:-86976345 None:intergenic
GACTCAGCACAAGGTTGAAA+TGG 0.402052 7_2:+86975892 Msa1085960:intron
GCGCGTGGGTGGGGTGGGGT+GGG 0.403093 7_2:-86970188 None:intergenic
ACATATTTCTTGGCCAAACT+TGG 0.405256 7_2:-86976528 None:intergenic
AACCAGTTCCTCCTTCTGTT+GGG 0.408203 7_2:+86975990 Msa1085960:CDS
CAACCAGTTCCTCCTTCTGT+TGG 0.416484 7_2:+86975989 Msa1085960:CDS
ACAAGCGTGACGGGAAGTTT+GGG 0.424681 7_2:+86975915 Msa1085960:CDS
TGAGCTGGTGGTTGGGCAGG+TGG 0.425407 7_2:-86976052 None:intergenic
TCAGTACAGAGGCAAAATTC+AGG 0.426098 7_2:-86972052 None:intergenic
TATGCACCACAACCAGCATA+TGG 0.434907 7_2:+86976013 Msa1085960:CDS
GGAGAAGTAGTAACCCTAGA+TGG 0.437950 7_2:-86970363 None:intergenic
CCTTGACATATCATCATAAA+GGG 0.442804 7_2:-86971892 None:intergenic
AGAGAGAAAGCGCGTGGGTG+GGG 0.445983 7_2:-86970197 None:intergenic
ATAGCCCTGAGCTGGTGGTT+GGG 0.448583 7_2:-86976059 None:intergenic
GATAGCCCTGAGCTGGTGGT+TGG 0.453696 7_2:-86976060 None:intergenic
ATGCGGGACATTTGCTGTAC+AGG 0.454843 7_2:-86975962 None:intergenic
TTCCTCACTTCCCACAATCA+TGG 0.455138 7_2:-86975623 None:intergenic
ATATGCATGCAACTTGGTTA+AGG 0.460046 7_2:-86975588 None:intergenic
CGGTTCCTGAAACAATCAAT+AGG 0.461457 7_2:-86976220 None:intergenic
CAGTCAGAAATCCAAACTTA+GGG 0.462224 7_2:-86976344 None:intergenic
ACTCCCACTTGGTAAACGTT+GGG 0.463735 7_2:+86969975 None:intergenic
GAGAAAGCGCGTGGGTGGGG+TGG 0.471365 7_2:-86970194 None:intergenic
TGAAGTCAAAAGTATAAGAA+TGG 0.473824 7_2:-86976391 None:intergenic
TTCTCCACACCTACCACTGC+AGG 0.479185 7_2:-86972020 None:intergenic
GTCGTTTGTAAGAGTGAGTC+AGG 0.481556 7_2:+86970041 Msa1085960:five_prime_UTR
TACCCAACAGAAGGAGGAAC+TGG 0.482353 7_2:-86975992 None:intergenic
GGCACTGCCATCACTGGTTG+CGG 0.482881 7_2:-86975938 None:intergenic
CTCTATTGTTGCCATGATTG+TGG 0.490690 7_2:+86975612 Msa1085960:CDS
GATCAGTGTGCCATAGATTC+CGG 0.496322 7_2:-86970460 None:intergenic
TCCAGATACACATGCTGTGC+TGG 0.497369 7_2:+86971989 Msa1085960:intron
TCTTACAAACGACGCATCGT+AGG 0.503435 7_2:-86970031 None:intergenic
TTGAAATGGACAAGCGTGAC+GGG 0.503821 7_2:+86975906 Msa1085960:CDS
TATTTCTTGGCCAAACTTGG+CGG 0.506673 7_2:-86976525 None:intergenic
TGTTGTGGAGGATAAGCAGC+AGG 0.509075 7_2:-86976100 None:intergenic
CCTTGTGGAGGATAAGCAGC+AGG 0.512049 7_2:-86976133 None:intergenic
CTCTCAGATCTATCCATCTA+GGG 0.514583 7_2:+86970350 Msa1085960:intron
TTCTGCCCATATGCTGGTTG+TGG 0.520583 7_2:-86976019 None:intergenic
TCTATTGTTGCCATGATTGT+GGG 0.521129 7_2:+86975613 Msa1085960:CDS
CCATAATTCTGCCCATATGC+TGG 0.523656 7_2:-86976025 None:intergenic
TAGGGTTACTACTTCTCCTC+CGG 0.526134 7_2:+86970368 Msa1085960:five_prime_UTR
AGAGAGAGAAAGCGCGTGGG+TGG 0.527835 7_2:-86970199 None:intergenic
GCTCAGGGCTATCCCGCTAC+TGG 0.528162 7_2:+86976070 Msa1085960:CDS
TGATCTCATGAGAACTATCC+AGG 0.529386 7_2:+86970478 Msa1085960:CDS
GTAGCGGGATAGCCCTGAGC+TGG 0.535476 7_2:-86976067 None:intergenic
ACAGGAGGCACTGCCATCAC+TGG 0.536277 7_2:-86975944 None:intergenic
TACTCCCACTTGGTAAACGT+TGG 0.539005 7_2:+86969974 None:intergenic
AGGAACTGGTTGATCAATGC+GGG 0.542027 7_2:-86975978 None:intergenic
AATATCACACATTAAATCGC+GGG 0.542534 7_2:-86976492 None:intergenic
AAAGTCTTTATATTATTGGC+CGG 0.542798 7_2:-86970121 None:intergenic
GTTTGGGCCGCAACCAGTGA+TGG 0.543967 7_2:+86975931 Msa1085960:CDS
TCTCTGCTTTGGAAATTCAG+TGG 0.544883 7_2:+86975235 Msa1085960:CDS
TAGGGTGTGTGCGTGCATGC+AGG 0.544903 7_2:+86975786 Msa1085960:intron
CAGATTGCTGCTTATCCTTG+TGG 0.547142 7_2:+86970616 Msa1085960:intron
TTCTTCTTCTTCTTTGCCGG+AGG 0.548168 7_2:-86970384 None:intergenic
AAATTTAGAGCAGTTTGTGT+TGG 0.555860 7_2:+86976189 Msa1085960:three_prime_UTR
GTTACATGCCCTGCAGTGGT+AGG 0.556389 7_2:+86972011 Msa1085960:CDS
TAGAGAATATGCATGCAACT+TGG 0.557546 7_2:-86975594 None:intergenic
ATCTTGAGAAAATGCAACTC+CGG 0.559310 7_2:+86970429 Msa1085960:CDS
CTTACAAACGACGCATCGTA+GGG 0.561411 7_2:-86970030 None:intergenic
GAGAGAGAAAGCGCGTGGGT+GGG 0.567611 7_2:-86970198 None:intergenic
TATGAACTATTGTAACTGCC+AGG 0.573029 7_2:+86970074 Msa1085960:five_prime_UTR
ATAGATTCCGGTAATTCTGC+CGG 0.573475 7_2:-86970448 None:intergenic
CCTGCCCAACCACCAGCTCA+GGG 0.573738 7_2:+86976055 Msa1085960:CDS
AGAGTGAGTCAGGTCAGCTA+TGG 0.577970 7_2:+86970051 Msa1085960:five_prime_UTR
ATCACCTAGAATAACCAGAA+GGG 0.579600 7_2:-86976162 None:intergenic
ATGCACCACAACCAGCATAT+GGG 0.582709 7_2:+86976014 Msa1085960:CDS
GCGGGATAGCCCTGAGCTGG+TGG 0.587686 7_2:-86976064 None:intergenic
GTTGTGGAGGATAAGCAGCA+GGG 0.593369 7_2:-86976099 None:intergenic
GCTTACATGGAGTATCGACC+TGG 0.596144 7_2:-86970496 None:intergenic
CTTGTGGAGGATAAGCAGCA+GGG 0.596976 7_2:-86976132 None:intergenic
ATTGCTGCTTATCCTTGTGG+TGG 0.597371 7_2:+86970619 Msa1085960:CDS
AGAAAGAGAGAGAAAGCGCG+TGG 0.604158 7_2:-86970203 None:intergenic
AAAACTAAACTACTCCCACT+TGG 0.606103 7_2:+86969964 None:intergenic
CCCTTTATGATGATATGTCA+AGG 0.608347 7_2:+86971892 Msa1085960:CDS
CGAAGCAAGTATGATACACA+TGG 0.611216 7_2:-86971861 None:intergenic
TCACCTAGAATAACCAGAAG+GGG 0.621429 7_2:-86976161 None:intergenic
TTATTTGCAGACTCAGCACA+AGG 0.625897 7_2:+86975883 Msa1085960:intron
CGGTGTTGAGTAGAAGACAC+TGG 0.627767 7_2:-86970227 None:intergenic
GCTGGTTACATGCCCTGCAG+TGG 0.628209 7_2:+86972007 Msa1085960:CDS
CCTGCTGCTTATCCTCCACA+AGG 0.630522 7_2:+86976133 Msa1085960:CDS
AATCCCAACGTTTACCAAGT+GGG 0.633212 7_2:-86969978 None:intergenic
TAATATCACACATTAAATCG+CGG 0.638090 7_2:-86976493 None:intergenic
ATGCCCTGCAGTGGTAGGTG+TGG 0.638395 7_2:+86972016 Msa1085960:CDS
GAAAGAGAGAGAAAGCGCGT+GGG 0.640039 7_2:-86970202 None:intergenic
GTCAGAAATCCAAACTTAGG+GGG 0.640246 7_2:-86976342 None:intergenic
TGTGGTGCATACCCAACAGA+AGG 0.640639 7_2:-86976001 None:intergenic
TATCACCTAGAATAACCAGA+AGG 0.641227 7_2:-86976163 None:intergenic
GGGAAGTGAGGAAATTTCGG+AGG 0.641644 7_2:+86975633 Msa1085960:CDS
TTGCAACAGAAAGCGAGTTG+AGG 0.642740 7_2:-86975258 None:intergenic
CGGGACATTTGCTGTACAGG+AGG 0.642937 7_2:-86975959 None:intergenic
TCTCCACACCTACCACTGCA+GGG 0.646565 7_2:-86972019 None:intergenic
TGCCATGATTGTGGGAAGTG+AGG 0.647664 7_2:+86975621 Msa1085960:CDS
GCTGCTTATCCTCCACAACA+AGG 0.651296 7_2:+86976103 Msa1085960:CDS
AGTCTTACGAGCAGTAAACA+AGG 0.652877 7_2:-86975684 None:intergenic
GGTGCATACCCAACAGAAGG+AGG 0.662450 7_2:-86975998 None:intergenic
TTGTGGAGGATAAGCAGCAG+GGG 0.664484 7_2:-86976131 None:intergenic
GTTGAAATGGACAAGCGTGA+CGG 0.665093 7_2:+86975905 Msa1085960:CDS
TTGTGGAGGATAAGCAGCAG+GGG 0.675822 7_2:-86976098 None:intergenic
TAATCCCAACGTTTACCAAG+TGG 0.676713 7_2:-86969979 None:intergenic
CACCTAGAATAACCAGAAGG+GGG 0.685790 7_2:-86976160 None:intergenic
GTTTATATACCTCAGTACAG+AGG 0.692939 7_2:-86972063 None:intergenic
AGTCAGAAATCCAAACTTAG+GGG 0.693770 7_2:-86976343 None:intergenic
TACGAAATTGAAGAAAACAA+CGG 0.696555 7_2:-86976240 None:intergenic
TGTGGAGGATAAGCAGCAGG+GGG 0.703339 7_2:-86976097 None:intergenic
TGTGGAGGATAAGCAGCAGG+GGG 0.704394 7_2:-86976130 None:intergenic
ATCAAGCAGTCATATGTGTG+TGG 0.708124 7_2:+86976276 Msa1085960:three_prime_UTR
GTGGAGGATAAGCAGCAGGG+GGG 0.717882 7_2:-86976096 None:intergenic
ATGGATGACATACCACCACA+AGG 0.728919 7_2:-86970631 None:intergenic
GAGGAACTGGTTGATCAATG+CGG 0.734048 7_2:-86975979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATTAATGATAGAAA+TGG - chr7_2:86970565-86970584 None:intergenic 10.0%
!!! ATCAATAAAAAAAAGTATTT+TGG - chr7_2:86975520-86975539 None:intergenic 10.0%
!!! CAATAAAAATTGAAAGTATT+TGG - chr7_2:86973033-86973052 None:intergenic 15.0%
!!! CAAATACTTTCAATTTTTAT+TGG + chr7_2:86973031-86973050 Msa1085960:intron 15.0%
!! TATATATATTGAAGAGAAAA+GGG - chr7_2:86973278-86973297 None:intergenic 15.0%
!! ACTATAAGGAAATTTAAAAA+CGG - chr7_2:86974221-86974240 None:intergenic 15.0%
!!! AACCTTTTTTTTTTCATTTT+AGG + chr7_2:86974687-86974706 Msa1085960:intron 15.0%
!! AACCTAAAATGAAAAAAAAA+AGG - chr7_2:86974692-86974711 None:intergenic 15.0%
!! TATTTGAATATAGTTGTAAA+AGG + chr7_2:86974782-86974801 Msa1085960:intron 15.0%
!!! ATATGCAATTTTTTTGTTTA+GGG + chr7_2:86975431-86975450 Msa1085960:intron 15.0%
!!! ATATGCAATTTTTTTGTTTA+GGG + chr7_2:86975431-86975450 Msa1085960:intron 15.0%
!!! TTTGACTTCAATTTATATAT+TGG + chr7_2:86976404-86976423 Msa1085960:three_prime_UTR 15.0%
!!! TGAAATGGAATTTTTGAATA+AGG - chr7_2:86970148-86970167 None:intergenic 20.0%
!! GAAAATCAAATCAAATGAAA+TGG - chr7_2:86970163-86970182 None:intergenic 20.0%
!! GAAAATGAAAATAACGAAAT+AGG - chr7_2:86970301-86970320 None:intergenic 20.0%
!! TGAAAAACACAATAAAATGT+TGG + chr7_2:86971055-86971074 Msa1085960:intron 20.0%
!! GTAACAATCAATATAAATAC+AGG - chr7_2:86971246-86971265 None:intergenic 20.0%
!! CTATTAGGAAAATAAGTAAT+AGG - chr7_2:86971808-86971827 None:intergenic 20.0%
!! CAGAACATTAAATTACTATT+AGG - chr7_2:86971823-86971842 None:intergenic 20.0%
!! AAAGTCATATAATATGACTA+GGG + chr7_2:86972237-86972256 Msa1085960:intron 20.0%
!! AGAAAGAAAATACATGTATA+GGG + chr7_2:86972273-86972292 Msa1085960:intron 20.0%
!!! ACTGTTTTTATTGTTGTATT+TGG + chr7_2:86972348-86972367 Msa1085960:intron 20.0%
!!! CTGTTTTTATTGTTGTATTT+GGG + chr7_2:86972349-86972368 Msa1085960:intron 20.0%
!!! GATCTATACTTTTATTACTA+TGG + chr7_2:86972489-86972508 Msa1085960:intron 20.0%
!! ATATATATTGAAGAGAAAAG+GGG - chr7_2:86973277-86973296 None:intergenic 20.0%
!! CTATATATATTGAAGAGAAA+AGG - chr7_2:86973279-86973298 None:intergenic 20.0%
!!! AGTATATCCTTTGAAATTAT+AGG + chr7_2:86974188-86974207 Msa1085960:intron 20.0%
!!! GTATATCCTTTGAAATTATA+GGG + chr7_2:86974189-86974208 Msa1085960:intron 20.0%
!!! TTTAAAACTTCTATCGTATT+AGG + chr7_2:86974325-86974344 Msa1085960:intron 20.0%
!! ACCAAGATTTAATATTTGAA+AGG + chr7_2:86974382-86974401 Msa1085960:intron 20.0%
!! TCCTTTCAAATATTAAATCT+TGG - chr7_2:86974386-86974405 None:intergenic 20.0%
!!! ATTTAGTTCATTATCAACAA+TGG - chr7_2:86974557-86974576 None:intergenic 20.0%
!! ATTTATTTCATGATCAAATG+AGG + chr7_2:86974578-86974597 Msa1085960:intron 20.0%
!! TAAATACTATAGTTGAACAA+CGG - chr7_2:86974668-86974687 None:intergenic 20.0%
!!! CTATAAGTGAAACAATTTTT+TGG + chr7_2:86974814-86974833 Msa1085960:intron 20.0%
!! TATGAATGAAATAAAGAGAT+GGG - chr7_2:86975352-86975371 None:intergenic 20.0%
!!! CATATGCAATTTTTTTGTTT+AGG + chr7_2:86975430-86975449 Msa1085960:intron 20.0%
!!! CATATGCAATTTTTTTGTTT+AGG + chr7_2:86975430-86975449 Msa1085960:intron 20.0%
!!! TTATGTTTCTTTTGTTTGTA+GGG + chr7_2:86975768-86975787 Msa1085960:intron 20.0%
! AAAGTCTTTATATTATTGGC+CGG - chr7_2:86970124-86970143 None:intergenic 25.0%
! AGGCAAAGTCTTTATATTAT+TGG - chr7_2:86970128-86970147 None:intergenic 25.0%
! TTGAATAACTGTTTGCTTAA+TGG + chr7_2:86970806-86970825 Msa1085960:intron 25.0%
!! TGATTGTTACTTGATTTAGT+CGG + chr7_2:86971256-86971275 Msa1085960:intron 25.0%
! AGGCATGTAAAAAAAAAAGA+AGG - chr7_2:86972102-86972121 None:intergenic 25.0%
! ATTTAAGCTCATGCATAAAA+TGG + chr7_2:86972201-86972220 Msa1085960:intron 25.0%
! TTTAAGCTCATGCATAAAAT+GGG + chr7_2:86972202-86972221 Msa1085960:intron 25.0%
! CAAAGTCATATAATATGACT+AGG + chr7_2:86972236-86972255 Msa1085960:intron 25.0%
! GAGAAAGAAAATACATGTAT+AGG + chr7_2:86972272-86972291 Msa1085960:intron 25.0%
!! TTCTTCTACATAGTTTTTGT+TGG + chr7_2:86972450-86972469 Msa1085960:intron 25.0%
!! TAAAAGTATAGATCAGATGA+GGG - chr7_2:86972483-86972502 None:intergenic 25.0%
!! ATAAAAGTATAGATCAGATG+AGG - chr7_2:86972484-86972503 None:intergenic 25.0%
! GTGTGTACTATGTAATAAAA+CGG - chr7_2:86972779-86972798 None:intergenic 25.0%
! TATATATTGAAGAGAAAAGG+GGG - chr7_2:86973276-86973295 None:intergenic 25.0%
! AATTGTCAATATTCTGTGAT+TGG + chr7_2:86973303-86973322 Msa1085960:intron 25.0%
!!! CATATAAACACTGATTTCAA+TGG - chr7_2:86973545-86973564 None:intergenic 25.0%
! CATTGAAATCAGTGTTTATA+TGG + chr7_2:86973543-86973562 Msa1085960:intron 25.0%
!! TGTGTTTATATGGTAGATTT+TGG + chr7_2:86973643-86973662 Msa1085960:intron 25.0%
! ATTGCAATTTATCGTGAAAT+TGG + chr7_2:86973689-86973708 Msa1085960:intron 25.0%
!! TTTTCACTTCTCTCTTAATT+CGG - chr7_2:86973873-86973892 None:intergenic 25.0%
! TAACATTGTTCACTACATAA+TGG + chr7_2:86974066-86974085 Msa1085960:intron 25.0%
! TGATTAACTAATTTCCTGTT+TGG + chr7_2:86974100-86974119 Msa1085960:intron 25.0%
! GATTAACTAATTTCCTGTTT+GGG + chr7_2:86974101-86974120 Msa1085960:intron 25.0%
! AATTTCAAAGGATATACTAC+AGG - chr7_2:86974186-86974205 None:intergenic 25.0%
! ATTGTTCCCTATAATTTCAA+AGG - chr7_2:86974198-86974217 None:intergenic 25.0%
!! AAAAGAGGTACAATTAGAAA+TGG - chr7_2:86974248-86974267 None:intergenic 25.0%
!!! TCTTGGTCAAGTTTTATATT+GGG - chr7_2:86974369-86974388 None:intergenic 25.0%
!!! ATCTTGGTCAAGTTTTATAT+TGG - chr7_2:86974370-86974389 None:intergenic 25.0%
! AAATACTATAGTTGAACAAC+GGG - chr7_2:86974667-86974686 None:intergenic 25.0%
! TAAAAGAAAGTAGAAAAGTG+TGG + chr7_2:86974919-86974938 Msa1085960:intron 25.0%
!!! TAATTATGCATTGTTGTTTC+AGG + chr7_2:86975208-86975227 Msa1085960:intron 25.0%
! GTATGAATGAAATAAAGAGA+TGG - chr7_2:86975353-86975372 None:intergenic 25.0%
! TTCTCAAATACTATCTTGTT+TGG + chr7_2:86975657-86975676 Msa1085960:CDS 25.0%
!!! CTTATGTTTCTTTTGTTTGT+AGG + chr7_2:86975767-86975786 Msa1085960:intron 25.0%
!!! GTAAGTATGTTACTTTTTAC+CGG + chr7_2:86975808-86975827 Msa1085960:intron 25.0%
! TACGAAATTGAAGAAAACAA+CGG - chr7_2:86976243-86976262 None:intergenic 25.0%
!! TGAAGTCAAAAGTATAAGAA+TGG - chr7_2:86976394-86976413 None:intergenic 25.0%
! GGTGTTTATATAATCTTGTT+TGG + chr7_2:86976425-86976444 Msa1085960:three_prime_UTR 25.0%
! TAATATCACACATTAAATCG+CGG - chr7_2:86976496-86976515 None:intergenic 25.0%
AAGTGAAAAAGTCGAAAAAC+CGG + chr7_2:86970102-86970121 Msa1085960:five_prime_UTR 30.0%
TGTTCTTTCAATCAATCCAA+AGG - chr7_2:86970266-86970285 None:intergenic 30.0%
AGAAGAAGAAGAAGAAGAAA+TGG + chr7_2:86970394-86970413 Msa1085960:exon 30.0%
TAAAAAGAGTGATGAAAGTG+TGG - chr7_2:86970529-86970548 None:intergenic 30.0%
! TGCTGTTAAATTGTCGTTTA+TGG + chr7_2:86970730-86970749 Msa1085960:intron 30.0%
! CGTTTATGGATTTTAGATCT+TGG + chr7_2:86970744-86970763 Msa1085960:intron 30.0%
ATAATCACACATGTCAGTAT+TGG - chr7_2:86970930-86970949 None:intergenic 30.0%
!! CAATGACTGAATTACTTTTG+TGG + chr7_2:86971168-86971187 Msa1085960:intron 30.0%
AATTATTCAGCTTGATCAAC+TGG - chr7_2:86971322-86971341 None:intergenic 30.0%
! TTTGTAAGAAAAGAGTGTAG+TGG + chr7_2:86971348-86971367 Msa1085960:intron 30.0%
! TTGTAAGAAAAGAGTGTAGT+GGG + chr7_2:86971349-86971368 Msa1085960:intron 30.0%
TGAATGAGCATCTAAATTCA+AGG - chr7_2:86971504-86971523 None:intergenic 30.0%
TACAAAGAGATACTTGGAAA+TGG - chr7_2:86971587-86971606 None:intergenic 30.0%
ACAAAGTACAAAGAGATACT+TGG - chr7_2:86971593-86971612 None:intergenic 30.0%
AATGAATCATGAACTGACAA+GGG - chr7_2:86971679-86971698 None:intergenic 30.0%
TAATGAATCATGAACTGACA+AGG - chr7_2:86971680-86971699 None:intergenic 30.0%
TCAGTTCATGATTCATTACT+TGG + chr7_2:86971682-86971701 Msa1085960:intron 30.0%
! CAGTTGATTGCAATTTTACT+TGG + chr7_2:86971736-86971755 Msa1085960:intron 30.0%
!!! CAATTTTACTTGGCCTTAAT+AGG + chr7_2:86971746-86971765 Msa1085960:intron 30.0%
AACATTTATGCCTCCTATTA+AGG - chr7_2:86971762-86971781 None:intergenic 30.0%
CCTTGACATATCATCATAAA+GGG - chr7_2:86971895-86971914 None:intergenic 30.0%
ACCTTGACATATCATCATAA+AGG - chr7_2:86971896-86971915 None:intergenic 30.0%
! ACAAACTGTGCAATTCATTT+TGG - chr7_2:86971941-86971960 None:intergenic 30.0%
CTTAAATCATGCAATGTCTA+AGG - chr7_2:86972188-86972207 None:intergenic 30.0%
TTAAGCTCATGCATAAAATG+GGG + chr7_2:86972203-86972222 Msa1085960:intron 30.0%
CTATGTAGAAGAAACTATCA+AGG - chr7_2:86972443-86972462 None:intergenic 30.0%
AAGTTGTATGAAATGTTGGA+TGG - chr7_2:86972707-86972726 None:intergenic 30.0%
AACATTTCATACAACTTCAC+CGG + chr7_2:86972710-86972729 Msa1085960:intron 30.0%
! ATGACATTTTCCTATTAGCT+AGG + chr7_2:86972747-86972766 Msa1085960:intron 30.0%
! TGACATTTTCCTATTAGCTA+GGG + chr7_2:86972748-86972767 Msa1085960:intron 30.0%
TATACTGAAGCAAATTATGC+AGG - chr7_2:86972888-86972907 None:intergenic 30.0%
AGATCACTCTTATTCATAAG+AGG - chr7_2:86972931-86972950 None:intergenic 30.0%
!! ATTGAAAGTATTTGGCATTG+TGG - chr7_2:86973025-86973044 None:intergenic 30.0%
!! GCAACACTGACTTATAAAAA+GGG - chr7_2:86973229-86973248 None:intergenic 30.0%
!!! CATGTTCAGTTTTAGATACT+TGG + chr7_2:86973487-86973506 Msa1085960:intron 30.0%
!!! AGTTTTAGATACTTGGACAA+TGG + chr7_2:86973494-86973513 Msa1085960:intron 30.0%
TCAATGGACATTTATGAGTA+TGG - chr7_2:86973529-86973548 None:intergenic 30.0%
TTTCACTTCTCTCTTAATTC+GGG - chr7_2:86973872-86973891 None:intergenic 30.0%
TTATAAAGAGGAAGTGAAGA+GGG - chr7_2:86973994-86974013 None:intergenic 30.0%
CTTCCTCTTTATAACAGAAT+TGG + chr7_2:86974000-86974019 Msa1085960:intron 30.0%
TGACCAATTCTGTTATAAAG+AGG - chr7_2:86974006-86974025 None:intergenic 30.0%
TAGTGAACAATGTTATGAGA+AGG - chr7_2:86974061-86974080 None:intergenic 30.0%
CAGTTAGAAACATAACTGTT+AGG - chr7_2:86974147-86974166 None:intergenic 30.0%
! ACAGTTATGTTTCTAACTGT+AGG + chr7_2:86974148-86974167 Msa1085960:intron 30.0%
TCTAACTGTAGGATGATTAA+AGG + chr7_2:86974159-86974178 Msa1085960:intron 30.0%
! TTAGAAATGGTGGAACTATA+AGG - chr7_2:86974235-86974254 None:intergenic 30.0%
!! CTTGGTCAAGTTTTATATTG+GGG - chr7_2:86974368-86974387 None:intergenic 30.0%
AATATTTGAAAGGAAACCTG+TGG + chr7_2:86974392-86974411 Msa1085960:intron 30.0%
! AAAATCCAGTTTAAAACCAC+AGG - chr7_2:86974411-86974430 None:intergenic 30.0%
! GAAATACAGTTTGTTCAAGA+TGG + chr7_2:86974484-86974503 Msa1085960:intron 30.0%
ATCAACAATGGCATAAAAAC+CGG - chr7_2:86974545-86974564 None:intergenic 30.0%
AGGATTGAAAATACACTTTC+AGG + chr7_2:86974605-86974624 Msa1085960:intron 30.0%
ATTGAAAATACACTTTCAGG+TGG + chr7_2:86974608-86974627 Msa1085960:intron 30.0%
! TAGAAAAGTGTGGAGAAATT+TGG + chr7_2:86974929-86974948 Msa1085960:intron 30.0%
CATTAACTAAAGATCAGACA+GGG + chr7_2:86975121-86975140 Msa1085960:intron 30.0%
!! TGAAACAAACACTAGCTTTA+AGG - chr7_2:86975150-86975169 None:intergenic 30.0%
! TGTTTCACTTGAATTTTCTG+TGG + chr7_2:86975163-86975182 Msa1085960:intron 30.0%
! AAATTTAGAGCAGTTTGTGT+TGG + chr7_2:86976189-86976208 Msa1085960:three_prime_UTR 30.0%
TTGTTTGGTTATGTGCAATA+TGG + chr7_2:86976440-86976459 Msa1085960:three_prime_UTR 30.0%
AATATCACACATTAAATCGC+GGG - chr7_2:86976495-86976514 None:intergenic 30.0%
GCGATTTAATGTGTGATATT+AGG + chr7_2:86976495-86976514 Msa1085960:three_prime_UTR 30.0%
TATGAACTATTGTAACTGCC+AGG + chr7_2:86970074-86970093 Msa1085960:five_prime_UTR 35.0%
!!! GGTTTTTCGACTTTTTCACT+TGG - chr7_2:86970103-86970122 None:intergenic 35.0%
CCAAAGGAATGAAGGAATTA+CGG - chr7_2:86970250-86970269 None:intergenic 35.0%
CAATCAATCCAAAGGAATGA+AGG - chr7_2:86970258-86970277 None:intergenic 35.0%
TTCTTCTTCTTCTTCTTTGC+CGG - chr7_2:86970390-86970409 None:intergenic 35.0%
ATCTTGAGAAAATGCAACTC+CGG + chr7_2:86970429-86970448 Msa1085960:CDS 35.0%
GAGATCTGAAAAGAGAGTTA+TGG - chr7_2:86970653-86970672 None:intergenic 35.0%
!! TGCATCGTTTTAAGTAGATG+AGG + chr7_2:86971021-86971040 Msa1085960:intron 35.0%
CCTAAATGATAGATCACAAG+CGG - chr7_2:86971656-86971675 None:intergenic 35.0%
!!! TTTTACTTGGCCTTAATAGG+AGG + chr7_2:86971749-86971768 Msa1085960:intron 35.0%
CCCTTTATGATGATATGTCA+AGG + chr7_2:86971892-86971911 Msa1085960:CDS 35.0%
GTTTATATACCTCAGTACAG+AGG - chr7_2:86972066-86972085 None:intergenic 35.0%
! GTTTTCTTCAAGAGTAGGTT+CGG + chr7_2:86972145-86972164 Msa1085960:intron 35.0%
! TTTTCTTCAAGAGTAGGTTC+GGG + chr7_2:86972146-86972165 Msa1085960:intron 35.0%
TATAATATGACTAGGGCAAG+AGG + chr7_2:86972244-86972263 Msa1085960:intron 35.0%
AAGAAACTATCAAGGCTTAG+AGG - chr7_2:86972435-86972454 None:intergenic 35.0%
! TCAATCATCTTTTCTACCGT+AGG + chr7_2:86972559-86972578 Msa1085960:intron 35.0%
! CAATCATCTTTTCTACCGTA+GGG + chr7_2:86972560-86972579 Msa1085960:intron 35.0%
! AATCATCTTTTCTACCGTAG+GGG + chr7_2:86972561-86972580 Msa1085960:intron 35.0%
!! TAGAATTTTGATAGCCCCTA+CGG - chr7_2:86972578-86972597 None:intergenic 35.0%
GTACTAGATGAGTTAGACTT+GGG - chr7_2:86972618-86972637 None:intergenic 35.0%
AGAATGTTGCTCTTGATGTA+TGG - chr7_2:86972643-86972662 None:intergenic 35.0%
GGTGAAGTTGTATGAAATGT+TGG - chr7_2:86972711-86972730 None:intergenic 35.0%
CTTCAGTATAAACCTCTAGT+CGG + chr7_2:86972898-86972917 Msa1085960:intron 35.0%
TTGTGGCAAAGATTAACACT+GGG - chr7_2:86973008-86973027 None:intergenic 35.0%
ATTGTGGCAAAGATTAACAC+TGG - chr7_2:86973009-86973028 None:intergenic 35.0%
TGCCATATGATTGAGTGTAT+CGG + chr7_2:86973054-86973073 Msa1085960:intron 35.0%
AGTAAATAAACGCCCTTGAA+AGG - chr7_2:86973148-86973167 None:intergenic 35.0%
!!! TCAGACAGTTGAAGGTTTTT+TGG + chr7_2:86973190-86973209 Msa1085960:intron 35.0%
!!! CAGACAGTTGAAGGTTTTTT+GGG + chr7_2:86973191-86973210 Msa1085960:intron 35.0%
!!! AGACAGTTGAAGGTTTTTTG+GGG + chr7_2:86973192-86973211 Msa1085960:intron 35.0%
!! GGCAACACTGACTTATAAAA+AGG - chr7_2:86973230-86973249 None:intergenic 35.0%
AACAACAGAGACTCAAATTG+CGG - chr7_2:86973405-86973424 None:intergenic 35.0%
ACCATATAAACACACCATTG+CGG - chr7_2:86973637-86973656 None:intergenic 35.0%
TCAGATAGAACCTTAGAGAT+GGG - chr7_2:86973948-86973967 None:intergenic 35.0%
TTCAGATAGAACCTTAGAGA+TGG - chr7_2:86973949-86973968 None:intergenic 35.0%
GTTATAAAGAGGAAGTGAAG+AGG - chr7_2:86973995-86974014 None:intergenic 35.0%
TGTTCACTACATAATGGTCT+TGG + chr7_2:86974072-86974091 Msa1085960:intron 35.0%
GTTCACTACATAATGGTCTT+GGG + chr7_2:86974073-86974092 Msa1085960:intron 35.0%
AAACATAACTGTTAGGTGAC+TGG - chr7_2:86974140-86974159 None:intergenic 35.0%
! AGAGGTACAATTAGAAATGG+TGG - chr7_2:86974245-86974264 None:intergenic 35.0%
! CCTCTTTTATAGTGCTCTAA+CGG + chr7_2:86974260-86974279 Msa1085960:intron 35.0%
CGTTCCAAACATTCCTAATT+AGG - chr7_2:86974293-86974312 None:intergenic 35.0%
!! AAACTGGATTTTGAGAAAGC+TGG + chr7_2:86974419-86974438 Msa1085960:intron 35.0%
! GCAATTGGTAAACAAGGTTT+TGG + chr7_2:86974458-86974477 Msa1085960:intron 35.0%
! AGTTTGTTCAAGATGGAGAA+TGG + chr7_2:86974491-86974510 Msa1085960:intron 35.0%
TCATGATCAAATGAGGACAT+AGG + chr7_2:86974585-86974604 Msa1085960:intron 35.0%
! TTGTTTCACTTATAGCTCTG+AGG - chr7_2:86974809-86974828 None:intergenic 35.0%
!!! ACAATTTTTTGGACCTCGTT+TGG + chr7_2:86974825-86974844 Msa1085960:intron 35.0%
!!! CAATTTTTTGGACCTCGTTT+GGG + chr7_2:86974826-86974845 Msa1085960:intron 35.0%
!!! AATTTTTTGGACCTCGTTTG+GGG + chr7_2:86974827-86974846 Msa1085960:intron 35.0%
! AAAAGTGTGGAGAAATTTGG+AGG + chr7_2:86974932-86974951 Msa1085960:intron 35.0%
AAAGTGTGGAGAAATTTGGA+GGG + chr7_2:86974933-86974952 Msa1085960:intron 35.0%
AATTTGGAGGGAATGATGAA+AGG + chr7_2:86974945-86974964 Msa1085960:intron 35.0%
! GATTCACTATCCTTTAAGGA+GGG - chr7_2:86975012-86975031 None:intergenic 35.0%
TGCAGAAAATCTACAAACAG+GGG - chr7_2:86975039-86975058 None:intergenic 35.0%
GTGCAGAAAATCTACAAACA+GGG - chr7_2:86975040-86975059 None:intergenic 35.0%
AGTGCAGAAAATCTACAAAC+AGG - chr7_2:86975041-86975060 None:intergenic 35.0%
CCTGTCTGATCTTTAGTTAA+TGG - chr7_2:86975123-86975142 None:intergenic 35.0%
CCATTAACTAAAGATCAGAC+AGG + chr7_2:86975120-86975139 Msa1085960:intron 35.0%
!!! TTTCAGGTTTTTCTCTGCTT+TGG + chr7_2:86975224-86975243 Msa1085960:intron 35.0%
TGAAATAAAGAGATGGGAGT+GGG - chr7_2:86975346-86975365 None:intergenic 35.0%
ATGAAATAAAGAGATGGGAG+TGG - chr7_2:86975347-86975366 None:intergenic 35.0%
ATATGCATGCAACTTGGTTA+AGG - chr7_2:86975469-86975488 None:intergenic 35.0%
GTATGAATATGCATGCAACT+TGG - chr7_2:86975475-86975494 None:intergenic 35.0%
ATATGCATGCAACTTGGTTA+AGG - chr7_2:86975469-86975488 None:intergenic 35.0%
TAGAGAATATGCATGCAACT+TGG - chr7_2:86975597-86975616 None:intergenic 35.0%
TCTATTGTTGCCATGATTGT+GGG + chr7_2:86975613-86975632 Msa1085960:CDS 35.0%
ATTGTGCACGTTATAGTGAA+CGG + chr7_2:86975732-86975751 Msa1085960:intron 35.0%
!!! TGTTACTTTTTACCGGCAAT+TGG + chr7_2:86975815-86975834 Msa1085960:intron 35.0%
CATATTGATGAACCAATTGC+CGG - chr7_2:86975830-86975849 None:intergenic 35.0%
ATCACCTAGAATAACCAGAA+GGG - chr7_2:86976165-86976184 None:intergenic 35.0%
TATCACCTAGAATAACCAGA+AGG - chr7_2:86976166-86976185 None:intergenic 35.0%
! AGACACCTATTGATTGTTTC+AGG + chr7_2:86976215-86976234 Msa1085960:three_prime_UTR 35.0%
AGTCAGAAATCCAAACTTAG+GGG - chr7_2:86976346-86976365 None:intergenic 35.0%
CAGTCAGAAATCCAAACTTA+GGG - chr7_2:86976347-86976366 None:intergenic 35.0%
TCAGTCAGAAATCCAAACTT+AGG - chr7_2:86976348-86976367 None:intergenic 35.0%
ACATATTTCTTGGCCAAACT+TGG - chr7_2:86976531-86976550 None:intergenic 35.0%
TAATCCCAACGTTTACCAAG+TGG - chr7_2:86969982-86970001 None:intergenic 40.0%
CCGTAATTCCTTCATTCCTT+TGG + chr7_2:86970247-86970266 Msa1085960:intron 40.0%
TCTCTCAGATCTATCCATCT+AGG + chr7_2:86970349-86970368 Msa1085960:intron 40.0%
CTCTCAGATCTATCCATCTA+GGG + chr7_2:86970350-86970369 Msa1085960:intron 40.0%
ATAGATTCCGGTAATTCTGC+CGG - chr7_2:86970451-86970470 None:intergenic 40.0%
TGATCTCATGAGAACTATCC+AGG + chr7_2:86970478-86970497 Msa1085960:CDS 40.0%
! AAGAGTGATGAAAGTGTGGT+TGG - chr7_2:86970525-86970544 None:intergenic 40.0%
CATCTAAAGATTGCTCGATG+TGG - chr7_2:86971222-86971241 None:intergenic 40.0%
CACATCGAGCAATCTTTAGA+TGG + chr7_2:86971220-86971239 Msa1085960:intron 40.0%
!! GCGTCTGTTTGGTGTATATT+TGG + chr7_2:86971545-86971564 Msa1085960:intron 40.0%
CCGCTTGTGATCTATCATTT+AGG + chr7_2:86971653-86971672 Msa1085960:intron 40.0%
! GCAATCAACTGAAAGTGCAT+TGG - chr7_2:86971727-86971746 None:intergenic 40.0%
CGAAGCAAGTATGATACACA+TGG - chr7_2:86971864-86971883 None:intergenic 40.0%
TCAGTACAGAGGCAAAATTC+AGG - chr7_2:86972055-86972074 None:intergenic 40.0%
! TGAATTTTGCCTCTGTACTG+AGG + chr7_2:86972054-86972073 Msa1085960:CDS 40.0%
ATATCTGCAAATGCTGCCAT+GGG + chr7_2:86972123-86972142 Msa1085960:intron 40.0%
CTACTCTTGAAGAAAACCCA+TGG - chr7_2:86972142-86972161 None:intergenic 40.0%
! CATGGGTTTTCTTCAAGAGT+AGG + chr7_2:86972140-86972159 Msa1085960:intron 40.0%
AGTATAGATCAGATGAGGGT+AGG - chr7_2:86972479-86972498 None:intergenic 40.0%
!! GACGTTTTGAGCATGTATTG+AGG - chr7_2:86972528-86972547 None:intergenic 40.0%
CGTACTAGATGAGTTAGACT+TGG - chr7_2:86972619-86972638 None:intergenic 40.0%
TGGATGGCAAAATGTCAACA+CGG - chr7_2:86972691-86972710 None:intergenic 40.0%
! CATTTTCCTATTAGCTAGGG+TGG + chr7_2:86972751-86972770 Msa1085960:intron 40.0%
TGTACACCATAGGATTCAAG+CGG - chr7_2:86972843-86972862 None:intergenic 40.0%
! CAGGTATTGTGAGTGATAGA+GGG - chr7_2:86972869-86972888 None:intergenic 40.0%
TAAGAGTGATCTTCATGTCG+TGG + chr7_2:86972939-86972958 Msa1085960:intron 40.0%
GACCGATACACTCAATCATA+TGG - chr7_2:86973059-86973078 None:intergenic 40.0%
! AGATGAGAGGTGGATTTGTA+CGG - chr7_2:86973108-86973127 None:intergenic 40.0%
CTTTCCTCGTTTCCTTTCAA+GGG + chr7_2:86973133-86973152 Msa1085960:intron 40.0%
! CTCATTTATAGCCTTACCTC+TGG + chr7_2:86973166-86973185 Msa1085960:intron 40.0%
ATAAGTCAGTGTTGCCTAAC+TGG + chr7_2:86973234-86973253 Msa1085960:intron 40.0%
GGTGAAAAATAAGGCCAGTT+AGG - chr7_2:86973251-86973270 None:intergenic 40.0%
TATTGAAGAGAAAAGGGGGA+GGG - chr7_2:86973272-86973291 None:intergenic 40.0%
ATATTGAAGAGAAAAGGGGG+AGG - chr7_2:86973273-86973292 None:intergenic 40.0%
ACAACAGAGACTCAAATTGC+GGG - chr7_2:86973404-86973423 None:intergenic 40.0%
ACAATGTTGTGGAGACAAAG+CGG - chr7_2:86973442-86973461 None:intergenic 40.0%
CATACACTGGTACAATGTTG+TGG - chr7_2:86973453-86973472 None:intergenic 40.0%
CACAACATTGTACCAGTGTA+TGG + chr7_2:86973451-86973470 Msa1085960:intron 40.0%
CATCAACAAGAACCATACAC+TGG - chr7_2:86973466-86973485 None:intergenic 40.0%
!!! AGATTTTTAGCAACCGCCAT+AGG + chr7_2:86973567-86973586 Msa1085960:intron 40.0%
ATCCCTTTGCAAATAGCCTA+TGG - chr7_2:86973586-86973605 None:intergenic 40.0%
! CTGCAAAGAACTTTTGCCTT+TGG + chr7_2:86973723-86973742 Msa1085960:intron 40.0%
GAGAGTAATACCAGAGATAG+AGG - chr7_2:86973812-86973831 None:intergenic 40.0%
TTACTCTCTCCCTTCAAAAC+CGG + chr7_2:86973824-86973843 Msa1085960:intron 40.0%
! CCGTTAGAGCACTATAAAAG+AGG - chr7_2:86974263-86974282 None:intergenic 40.0%
TATAGTGCTCTAACGGTAAG+TGG + chr7_2:86974267-86974286 Msa1085960:intron 40.0%
TAACGGTAAGTGGCCTAATT+AGG + chr7_2:86974277-86974296 Msa1085960:intron 40.0%
GTGGCCTAATTAGGAATGTT+TGG + chr7_2:86974286-86974305 Msa1085960:intron 40.0%
! TTAGGAATGTTTGGAACGCT+AGG + chr7_2:86974295-86974314 Msa1085960:intron 40.0%
! TAGGAATGTTTGGAACGCTA+GGG + chr7_2:86974296-86974315 Msa1085960:intron 40.0%
!!! GGAAACCTGTGGTTTTAAAC+TGG + chr7_2:86974403-86974422 Msa1085960:intron 40.0%
GGATCATTTCTGTTGGCAAT+TGG + chr7_2:86974443-86974462 Msa1085960:intron 40.0%
CTGTTGGCAATTGGTAAACA+AGG + chr7_2:86974452-86974471 Msa1085960:intron 40.0%
! ACCATGGAGTTTCTTTTCAC+CGG + chr7_2:86974523-86974542 Msa1085960:intron 40.0%
! GAAAATACACTTTCAGGTGG+TGG + chr7_2:86974611-86974630 Msa1085960:intron 40.0%
! TCGTTTGGGGTTTGTTTGTA+GGG + chr7_2:86974840-86974859 Msa1085960:intron 40.0%
GATTAGGATTCCCTAACTGT+GGG + chr7_2:86974862-86974881 Msa1085960:intron 40.0%
GATGAAAGAGAGAGAGAGAA+AGG + chr7_2:86974975-86974994 Msa1085960:intron 40.0%
AAAGAGAGAGAGAGAAAGGT+AGG + chr7_2:86974979-86974998 Msa1085960:intron 40.0%
! ACTATCCTTTAAGGAGGGAA+TGG - chr7_2:86975007-86975026 None:intergenic 40.0%
! GGATTCACTATCCTTTAAGG+AGG - chr7_2:86975013-86975032 None:intergenic 40.0%
CTGGGATTCACTATCCTTTA+AGG - chr7_2:86975016-86975035 None:intergenic 40.0%
AAAATCTACAAACAGGGGCT+GGG - chr7_2:86975034-86975053 None:intergenic 40.0%
!! TCTCTGCTTTGGAAATTCAG+TGG + chr7_2:86975235-86975254 Msa1085960:CDS 40.0%
CTCTATTGTTGCCATGATTG+TGG + chr7_2:86975612-86975631 Msa1085960:CDS 40.0%
TGTGGGAAGTGAGGAAATTT+CGG + chr7_2:86975630-86975649 Msa1085960:CDS 40.0%
AGTCTTACGAGCAGTAAACA+AGG - chr7_2:86975687-86975706 None:intergenic 40.0%
TTATTTGCAGACTCAGCACA+AGG + chr7_2:86975883-86975902 Msa1085960:intron 40.0%
TCACCTAGAATAACCAGAAG+GGG - chr7_2:86976164-86976183 None:intergenic 40.0%
CGGTTCCTGAAACAATCAAT+AGG - chr7_2:86976223-86976242 None:intergenic 40.0%
ATCAAGCAGTCATATGTGTG+TGG + chr7_2:86976276-86976295 Msa1085960:three_prime_UTR 40.0%
! TGCATTTTTCCCCCTAAGTT+TGG + chr7_2:86976333-86976352 Msa1085960:three_prime_UTR 40.0%
GTCAGAAATCCAAACTTAGG+GGG - chr7_2:86976345-86976364 None:intergenic 40.0%
! GGGTTTTGCAATACTTGGAA+CGG - chr7_2:86976475-86976494 None:intergenic 40.0%
TATTTCTTGGCCAAACTTGG+CGG - chr7_2:86976528-86976547 None:intergenic 40.0%
CTTACAAACGACGCATCGTA+GGG - chr7_2:86970033-86970052 None:intergenic 45.0%
TCTTACAAACGACGCATCGT+AGG - chr7_2:86970034-86970053 None:intergenic 45.0%
GTCGTTTGTAAGAGTGAGTC+AGG + chr7_2:86970041-86970060 Msa1085960:five_prime_UTR 45.0%
!!! GACTTTTTCACTTGGCTTCC+TGG - chr7_2:86970095-86970114 None:intergenic 45.0%
GGAGAAGTAGTAACCCTAGA+TGG - chr7_2:86970366-86970385 None:intergenic 45.0%
TAGGGTTACTACTTCTCCTC+CGG + chr7_2:86970368-86970387 Msa1085960:five_prime_UTR 45.0%
TTCTTCTTCTTCTTTGCCGG+AGG - chr7_2:86970387-86970406 None:intergenic 45.0%
GGCAGAATTACCGGAATCTA+TGG + chr7_2:86970450-86970469 Msa1085960:CDS 45.0%
GATCAGTGTGCCATAGATTC+CGG - chr7_2:86970463-86970482 None:intergenic 45.0%
!! GTGTGGTTGGTTTGCTTACA+TGG - chr7_2:86970512-86970531 None:intergenic 45.0%
! CAGATTGCTGCTTATCCTTG+TGG + chr7_2:86970616-86970635 Msa1085960:intron 45.0%
! ATTGCTGCTTATCCTTGTGG+TGG + chr7_2:86970619-86970638 Msa1085960:CDS 45.0%
ATGGATGACATACCACCACA+AGG - chr7_2:86970634-86970653 None:intergenic 45.0%
ACACCTTTGATCAGAGGAGT+TGG - chr7_2:86970889-86970908 None:intergenic 45.0%
! ACTCCTCTGATCAAAGGTGT+CGG + chr7_2:86970889-86970908 Msa1085960:intron 45.0%
TGAGAAGGCTGATAAGCTCA+AGG - chr7_2:86971445-86971464 None:intergenic 45.0%
TGACTAACGCATGACTGAGA+AGG - chr7_2:86971460-86971479 None:intergenic 45.0%
TTCTCAGTCATGCGTTAGTC+AGG + chr7_2:86971459-86971478 Msa1085960:intron 45.0%
TCTCAGTCATGCGTTAGTCA+GGG + chr7_2:86971460-86971479 Msa1085960:intron 45.0%
GATAGTACACTGCGTCTGTT+TGG + chr7_2:86971534-86971553 Msa1085960:intron 45.0%
CGGAGACAGGTTATACAAGT+TGG - chr7_2:86971636-86971655 None:intergenic 45.0%
TGGCAGCATTTGCAGATATC+AGG - chr7_2:86972122-86972141 None:intergenic 45.0%
GATATCTGCAAATGCTGCCA+TGG + chr7_2:86972122-86972141 Msa1085960:intron 45.0%
AAGGCTTAGAGGTCAGTGTT+TGG - chr7_2:86972424-86972443 None:intergenic 45.0%
GGATGGCAAAATGTCAACAC+GGG - chr7_2:86972690-86972709 None:intergenic 45.0%
GTCATCGTAGACTGTAAGAC+CGG - chr7_2:86972732-86972751 None:intergenic 45.0%
TACACCATAGGATTCAAGCG+GGG - chr7_2:86972841-86972860 None:intergenic 45.0%
GTACACCATAGGATTCAAGC+GGG - chr7_2:86972842-86972861 None:intergenic 45.0%
TAGAGGGAGATGTACACCAT+AGG - chr7_2:86972853-86972872 None:intergenic 45.0%
! GCAGGTATTGTGAGTGATAG+AGG - chr7_2:86972870-86972889 None:intergenic 45.0%
! ATCTTCATGTCGTGGCTTTG+AGG + chr7_2:86972947-86972966 Msa1085960:intron 45.0%
TTAACACTGGGAGTTCACGA+GGG - chr7_2:86972996-86973015 None:intergenic 45.0%
ATTAACACTGGGAGTTCACG+AGG - chr7_2:86972997-86973016 None:intergenic 45.0%
GAAAGGAGATAGATGAGAGG+TGG - chr7_2:86973118-86973137 None:intergenic 45.0%
GAGGAAAGGAGATAGATGAG+AGG - chr7_2:86973121-86973140 None:intergenic 45.0%
CCTTGAAAGGAAACGAGGAA+AGG - chr7_2:86973135-86973154 None:intergenic 45.0%
CCTTTCCTCGTTTCCTTTCA+AGG + chr7_2:86973132-86973151 Msa1085960:intron 45.0%
AACTGTCTGAACCAGAGGTA+AGG - chr7_2:86973180-86973199 None:intergenic 45.0%
AAGGGGGAGGGTGAAAAATA+AGG - chr7_2:86973260-86973279 None:intergenic 45.0%
! TTCTGTGATTGGTGACCCAA+TGG + chr7_2:86973314-86973333 Msa1085960:intron 45.0%
! TCTGTGATTGGTGACCCAAT+GGG + chr7_2:86973315-86973334 Msa1085960:intron 45.0%
GACCAATTGCTAGTCCCATT+GGG - chr7_2:86973332-86973351 None:intergenic 45.0%
AGACCAATTGCTAGTCCCAT+TGG - chr7_2:86973333-86973352 None:intergenic 45.0%
! ACTAGCAATTGGTCTGTTCC+TGG + chr7_2:86973338-86973357 Msa1085960:intron 45.0%
CACCAGCATCAGAATGTGAT+GGG + chr7_2:86973363-86973382 Msa1085960:intron 45.0%
ATCCCATCACATTCTGATGC+TGG - chr7_2:86973368-86973387 None:intergenic 45.0%
! ATCAGAATGTGATGGGATCG+CGG + chr7_2:86973370-86973389 Msa1085960:intron 45.0%
TGTGGAGACAAAGCGGAAAT+TGG - chr7_2:86973435-86973454 None:intergenic 45.0%
CCTTTGCAAATAGCCTATGG+CGG - chr7_2:86973583-86973602 None:intergenic 45.0%
CGCCATAGGCTATTTGCAAA+GGG + chr7_2:86973581-86973600 Msa1085960:intron 45.0%
ATGGTACCACAACTCAATGG+CGG - chr7_2:86973611-86973630 None:intergenic 45.0%
CCTATGGTACCACAACTCAA+TGG - chr7_2:86973614-86973633 None:intergenic 45.0%
! CCATTGAGTTGTGGTACCAT+AGG + chr7_2:86973611-86973630 Msa1085960:intron 45.0%
GCCGCAATGGTGTGTTTATA+TGG + chr7_2:86973633-86973652 Msa1085960:intron 45.0%
ACCAGAGATAGAGGACATGT+GGG - chr7_2:86973803-86973822 None:intergenic 45.0%
TACCAGAGATAGAGGACATG+TGG - chr7_2:86973804-86973823 None:intergenic 45.0%
TGTCAATTCATCCAACCAGC+CGG - chr7_2:86973846-86973865 None:intergenic 45.0%
GATAGAACCTTAGAGATGGG+AGG - chr7_2:86973945-86973964 None:intergenic 45.0%
AAAGAGGAAGTGAAGAGGGA+GGG - chr7_2:86973990-86974009 None:intergenic 45.0%
TAAAGAGGAAGTGAAGAGGG+AGG - chr7_2:86973991-86974010 None:intergenic 45.0%
TGAGAAGGTGACATAGCAGA+GGG - chr7_2:86974046-86974065 None:intergenic 45.0%
ATGAGAAGGTGACATAGCAG+AGG - chr7_2:86974047-86974066 None:intergenic 45.0%
AGGTGACTGGATGAGAATGT+GGG - chr7_2:86974127-86974146 None:intergenic 45.0%
TAGGTGACTGGATGAGAATG+TGG - chr7_2:86974128-86974147 None:intergenic 45.0%
!! CTGGATTTTGAGAAAGCTGG+AGG + chr7_2:86974422-86974441 Msa1085960:intron 45.0%
AGCTGGAGGATCATTTCTGT+TGG + chr7_2:86974436-86974455 Msa1085960:intron 45.0%
AGAATGGAGAATCTGCACCA+TGG + chr7_2:86974507-86974526 Msa1085960:intron 45.0%
ACCGGTGAAAAGAAACTCCA+TGG - chr7_2:86974527-86974546 None:intergenic 45.0%
CTACAAACAAACCCCAAACG+AGG - chr7_2:86974841-86974860 None:intergenic 45.0%
! CTCGTTTGGGGTTTGTTTGT+AGG + chr7_2:86974839-86974858 Msa1085960:intron 45.0%
! GGGGTTTGTTTGTAGGGATT+AGG + chr7_2:86974846-86974865 Msa1085960:intron 45.0%
GGATTAGGATTCCCTAACTG+TGG + chr7_2:86974861-86974880 Msa1085960:intron 45.0%
AACGTAGAGACCCACAGTTA+GGG - chr7_2:86974875-86974894 None:intergenic 45.0%
AAACGTAGAGACCCACAGTT+AGG - chr7_2:86974876-86974895 None:intergenic 45.0%
TAACTGTGGGTCTCTACGTT+TGG + chr7_2:86974875-86974894 Msa1085960:intron 45.0%
AACTGTGGGTCTCTACGTTT+GGG + chr7_2:86974876-86974895 Msa1085960:intron 45.0%
! TCTACGTTTGGGGTGACTTT+AGG + chr7_2:86974887-86974906 Msa1085960:intron 45.0%
AGGTACCATTCCCTCCTTAA+AGG + chr7_2:86974999-86975018 Msa1085960:intron 45.0%
GAAAATCTACAAACAGGGGC+TGG - chr7_2:86975035-86975054 None:intergenic 45.0%
TTGCAACAGAAAGCGAGTTG+AGG - chr7_2:86975261-86975280 None:intergenic 45.0%
TAAAGAGATGGGAGTGGGAA+GGG - chr7_2:86975341-86975360 None:intergenic 45.0%
ATAAAGAGATGGGAGTGGGA+AGG - chr7_2:86975342-86975361 None:intergenic 45.0%
TTCCTCACTTCCCACAATCA+TGG - chr7_2:86975626-86975645 None:intergenic 45.0%
GACTCAGCACAAGGTTGAAA+TGG + chr7_2:86975892-86975911 Msa1085960:intron 45.0%
GTTGAAATGGACAAGCGTGA+CGG + chr7_2:86975905-86975924 Msa1085960:CDS 45.0%
TTGAAATGGACAAGCGTGAC+GGG + chr7_2:86975906-86975925 Msa1085960:CDS 45.0%
AGGAACTGGTTGATCAATGC+GGG - chr7_2:86975981-86976000 None:intergenic 45.0%
GAGGAACTGGTTGATCAATG+CGG - chr7_2:86975982-86976001 None:intergenic 45.0%
AACCAGTTCCTCCTTCTGTT+GGG + chr7_2:86975990-86976009 Msa1085960:CDS 45.0%
TATGCACCACAACCAGCATA+TGG + chr7_2:86976013-86976032 Msa1085960:CDS 45.0%
ATGCACCACAACCAGCATAT+GGG + chr7_2:86976014-86976033 Msa1085960:CDS 45.0%
CCATAATTCTGCCCATATGC+TGG - chr7_2:86976028-86976047 None:intergenic 45.0%
CCAGCATATGGGCAGAATTA+TGG + chr7_2:86976025-86976044 Msa1085960:CDS 45.0%
! ATCCCCCTTCTGGTTATTCT+AGG + chr7_2:86976158-86976177 Msa1085960:CDS 45.0%
CACCTAGAATAACCAGAAGG+GGG - chr7_2:86976163-86976182 None:intergenic 45.0%
! ATCGCGGGTTTTGCAATACT+TGG - chr7_2:86976480-86976499 None:intergenic 45.0%
AGAGTGAGTCAGGTCAGCTA+TGG + chr7_2:86970051-86970070 Msa1085960:five_prime_UTR 50.0%
! GAAAGAGAGAGAAAGCGCGT+GGG - chr7_2:86970205-86970224 None:intergenic 50.0%
! AGAAAGAGAGAGAAAGCGCG+TGG - chr7_2:86970206-86970225 None:intergenic 50.0%
! CGGTGTTGAGTAGAAGACAC+TGG - chr7_2:86970230-86970249 None:intergenic 50.0%
TGCAACTCCGGCAGAATTAC+CGG + chr7_2:86970441-86970460 Msa1085960:CDS 50.0%
!! GCTTACATGGAGTATCGACC+TGG - chr7_2:86970499-86970518 None:intergenic 50.0%
GCACCAACTCCTCTGATCAA+AGG + chr7_2:86970883-86970902 Msa1085960:intron 50.0%
ACACCGACACCTTTGATCAG+AGG - chr7_2:86970895-86970914 None:intergenic 50.0%
TGATCGTAATGTGCTTCCCG+TGG + chr7_2:86971417-86971436 Msa1085960:intron 50.0%
! TGATAAGCTCAAGGTGCCAC+GGG - chr7_2:86971436-86971455 None:intergenic 50.0%
! CTGATAAGCTCAAGGTGCCA+CGG - chr7_2:86971437-86971456 None:intergenic 50.0%
GATAGATCACAAGCGGAGAC+AGG - chr7_2:86971649-86971668 None:intergenic 50.0%
TCCAGATACACATGCTGTGC+TGG + chr7_2:86971989-86972008 Msa1085960:intron 50.0%
ACCAGCACAGCATGTGTATC+TGG - chr7_2:86971993-86972012 None:intergenic 50.0%
ACGGTACCACCCTAGCTAAT+AGG - chr7_2:86972760-86972779 None:intergenic 50.0%
AAGCGGGGTGGATGATATTG+AGG - chr7_2:86972826-86972845 None:intergenic 50.0%
AGAGGTGAAAGTCCGACTAG+AGG - chr7_2:86972913-86972932 None:intergenic 50.0%
AACGCCCTTGAAAGGAAACG+AGG - chr7_2:86973140-86973159 None:intergenic 50.0%
CCTTCAACTGTCTGAACCAG+AGG - chr7_2:86973185-86973204 None:intergenic 50.0%
! CCTCTGGTTCAGACAGTTGA+AGG + chr7_2:86973182-86973201 Msa1085960:intron 50.0%
! GACCCAATGGGACTAGCAAT+TGG + chr7_2:86973327-86973346 Msa1085960:intron 50.0%
GCACCAGCATCAGAATGTGA+TGG + chr7_2:86973362-86973381 Msa1085960:intron 50.0%
CCGCCATAGGCTATTTGCAA+AGG + chr7_2:86973580-86973599 Msa1085960:intron 50.0%
AAACACACCATTGCGGCCTA+TGG - chr7_2:86973630-86973649 None:intergenic 50.0%
TCAAGGGAACTGACCCTCTT+GGG - chr7_2:86973756-86973775 None:intergenic 50.0%
TTCAAGGGAACTGACCCTCT+TGG - chr7_2:86973757-86973776 None:intergenic 50.0%
!!! TCCAACCAGCCGGTTTTGAA+GGG - chr7_2:86973836-86973855 None:intergenic 50.0%
!! ATCCAACCAGCCGGTTTTGA+AGG - chr7_2:86973837-86973856 None:intergenic 50.0%
GAACCTTAGAGATGGGAGGA+GGG - chr7_2:86973941-86973960 None:intergenic 50.0%
AGAACCTTAGAGATGGGAGG+AGG - chr7_2:86973942-86973961 None:intergenic 50.0%
AAGAGGAAGTGAAGAGGGAG+GGG - chr7_2:86973989-86974008 None:intergenic 50.0%
ATGAGAATGTGGGCCCAAAC+AGG - chr7_2:86974117-86974136 None:intergenic 50.0%
ACTGTGGGTCTCTACGTTTG+GGG + chr7_2:86974877-86974896 Msa1085960:intron 50.0%
TGCCATGATTGTGGGAAGTG+AGG + chr7_2:86975621-86975640 Msa1085960:CDS 50.0%
GGGAAGTGAGGAAATTTCGG+AGG + chr7_2:86975633-86975652 Msa1085960:CDS 50.0%
! ACAAGCGTGACGGGAAGTTT+GGG + chr7_2:86975915-86975934 Msa1085960:CDS 50.0%
!! ATGCGGGACATTTGCTGTAC+AGG - chr7_2:86975965-86975984 None:intergenic 50.0%
CAACCAGTTCCTCCTTCTGT+TGG + chr7_2:86975989-86976008 Msa1085960:CDS 50.0%
TACCCAACAGAAGGAGGAAC+TGG - chr7_2:86975995-86976014 None:intergenic 50.0%
TGTGGTGCATACCCAACAGA+AGG - chr7_2:86976004-86976023 None:intergenic 50.0%
! TTCTGCCCATATGCTGGTTG+TGG - chr7_2:86976022-86976041 None:intergenic 50.0%
TTGTGGAGGATAAGCAGCAG+GGG - chr7_2:86976101-86976120 None:intergenic 50.0%
GTTGTGGAGGATAAGCAGCA+GGG - chr7_2:86976102-86976121 None:intergenic 50.0%
TGTTGTGGAGGATAAGCAGC+AGG - chr7_2:86976103-86976122 None:intergenic 50.0%
GCTGCTTATCCTCCACAACA+AGG + chr7_2:86976103-86976122 Msa1085960:CDS 50.0%
TTGTGGAGGATAAGCAGCAG+GGG - chr7_2:86976101-86976120 None:intergenic 50.0%
CTTGTGGAGGATAAGCAGCA+GGG - chr7_2:86976135-86976154 None:intergenic 50.0%
GTTACATGCCCTGCAGTGGT+AGG + chr7_2:86972011-86972030 Msa1085960:CDS 55.0%
TCTCCACACCTACCACTGCA+GGG - chr7_2:86972022-86972041 None:intergenic 55.0%
TTCTCCACACCTACCACTGC+AGG - chr7_2:86972023-86972042 None:intergenic 55.0%
TCCACCCCGCTTGAATCCTA+TGG + chr7_2:86972834-86972853 Msa1085960:intron 55.0%
ACCATAGGATTCAAGCGGGG+TGG - chr7_2:86972838-86972857 None:intergenic 55.0%
CATTCTGATGCTGGTGCACC+AGG - chr7_2:86973359-86973378 None:intergenic 55.0%
! GGATGTCCGCCATTGAGTTG+TGG + chr7_2:86973602-86973621 Msa1085960:intron 55.0%
TGTGGTACCATAGGCCGCAA+TGG + chr7_2:86973620-86973639 Msa1085960:intron 55.0%
CTTTGGCAATCCGCCCAAGA+GGG + chr7_2:86973740-86973759 Msa1085960:intron 55.0%
GGGTCAGTTCCCTTGAAGTC+AGG + chr7_2:86973760-86973779 Msa1085960:intron 55.0%
TCCCTTGAAGTCAGGCAGCT+CGG + chr7_2:86973768-86973787 Msa1085960:intron 55.0%
AGAGGACATGTGGGCCAAGA+AGG - chr7_2:86973794-86973813 None:intergenic 55.0%
GCCCACATGTCCTCTATCTC+TGG + chr7_2:86973799-86973818 Msa1085960:intron 55.0%
TCTCTCCCTTCAAAACCGGC+TGG + chr7_2:86973828-86973847 Msa1085960:intron 55.0%
TCCCTTCAAAACCGGCTGGT+TGG + chr7_2:86973832-86973851 Msa1085960:intron 55.0%
CATCCCTCCTCCCATCTCTA+AGG + chr7_2:86973935-86973954 Msa1085960:intron 55.0%
AGAGGAAGTGAAGAGGGAGG+GGG - chr7_2:86973988-86974007 None:intergenic 55.0%
AGGTGACATAGCAGAGGGTG+AGG - chr7_2:86974041-86974060 None:intergenic 55.0%
! GACAAGCGTGACGGGAAGTT+TGG + chr7_2:86975914-86975933 Msa1085960:CDS 55.0%
!! CGGGACATTTGCTGTACAGG+AGG - chr7_2:86975962-86975981 None:intergenic 55.0%
GGTGCATACCCAACAGAAGG+AGG - chr7_2:86976001-86976020 None:intergenic 55.0%
ATAGCCCTGAGCTGGTGGTT+GGG - chr7_2:86976062-86976081 None:intergenic 55.0%
TGTGGAGGATAAGCAGCAGG+GGG - chr7_2:86976100-86976119 None:intergenic 55.0%
! GGGGGATATCCTTGTTGTGG+AGG - chr7_2:86976115-86976134 None:intergenic 55.0%
GCAGGGGGATATCCTTGTTG+TGG - chr7_2:86976118-86976137 None:intergenic 55.0%
TGTGGAGGATAAGCAGCAGG+GGG - chr7_2:86976100-86976119 None:intergenic 55.0%
CCTTGTGGAGGATAAGCAGC+AGG - chr7_2:86976136-86976155 None:intergenic 55.0%
! CCTGCTGCTTATCCTCCACA+AGG + chr7_2:86976100-86976119 Msa1085960:CDS 55.0%
GAAGGGGGATATCCTTGTGG+AGG - chr7_2:86976148-86976167 None:intergenic 55.0%
CCAGAAGGGGGATATCCTTG+TGG - chr7_2:86976151-86976170 None:intergenic 55.0%
CCACAAGGATATCCCCCTTC+TGG + chr7_2:86976148-86976167 Msa1085960:CDS 55.0%
! AGAGAGAAAGCGCGTGGGTG+GGG - chr7_2:86970200-86970219 None:intergenic 60.0%
! GAGAGAGAAAGCGCGTGGGT+GGG - chr7_2:86970201-86970220 None:intergenic 60.0%
! AGAGAGAGAAAGCGCGTGGG+TGG - chr7_2:86970202-86970221 None:intergenic 60.0%
GCTGGTTACATGCCCTGCAG+TGG + chr7_2:86972007-86972026 Msa1085960:CDS 60.0%
ATGCCCTGCAGTGGTAGGTG+TGG + chr7_2:86972016-86972035 Msa1085960:CDS 60.0%
!! CCTCTTGGGCGGATTGCCAA+AGG - chr7_2:86973742-86973761 None:intergenic 60.0%
CCTTTGGCAATCCGCCCAAG+AGG + chr7_2:86973739-86973758 Msa1085960:intron 60.0%
AGGGAACTGACCCTCTTGGG+CGG - chr7_2:86973753-86973772 None:intergenic 60.0%
GCCGAGCTGCCTGACTTCAA+GGG - chr7_2:86973772-86973791 None:intergenic 60.0%
GAGGAAGTGAAGAGGGAGGG+GGG - chr7_2:86973987-86974006 None:intergenic 60.0%
TAGGGTGTGTGCGTGCATGC+AGG + chr7_2:86975786-86975805 Msa1085960:intron 60.0%
GTTTGGGCCGCAACCAGTGA+TGG + chr7_2:86975931-86975950 Msa1085960:CDS 60.0%
! GGCACTGCCATCACTGGTTG+CGG - chr7_2:86975941-86975960 None:intergenic 60.0%
!! ACAGGAGGCACTGCCATCAC+TGG - chr7_2:86975947-86975966 None:intergenic 60.0%
GATAGCCCTGAGCTGGTGGT+TGG - chr7_2:86976063-86976082 None:intergenic 60.0%
AGCAGGGGGGTAACCAGTAG+CGG - chr7_2:86976086-86976105 None:intergenic 60.0%
GTGGAGGATAAGCAGCAGGG+GGG - chr7_2:86976099-86976118 None:intergenic 60.0%
AGGCTCACAGCCGCCAAGTT+TGG + chr7_2:86976515-86976534 Msa1085960:three_prime_UTR 60.0%
! AGAAAGCGCGTGGGTGGGGT+GGG - chr7_2:86970196-86970215 None:intergenic 65.0%
GGCCGAGCTGCCTGACTTCA+AGG - chr7_2:86973773-86973792 None:intergenic 65.0%
GTCAGGCAGCTCGGCCTTCT+TGG + chr7_2:86973777-86973796 Msa1085960:intron 65.0%
TGAGCTGGTGGTTGGGCAGG+TGG - chr7_2:86976055-86976074 None:intergenic 65.0%
ACCTGCCCAACCACCAGCTC+AGG + chr7_2:86976054-86976073 Msa1085960:CDS 65.0%
CCTGCCCAACCACCAGCTCA+GGG + chr7_2:86976055-86976074 Msa1085960:CDS 65.0%
! GTAGCGGGATAGCCCTGAGC+TGG - chr7_2:86976070-86976089 None:intergenic 65.0%
GCTCAGGGCTATCCCGCTAC+TGG + chr7_2:86976070-86976089 Msa1085960:CDS 65.0%
GCAGGGGGGTAACCAGTAGC+GGG - chr7_2:86976085-86976104 None:intergenic 65.0%
! GAAAGCGCGTGGGTGGGGTG+GGG - chr7_2:86970195-86970214 None:intergenic 70.0%
! GAGAAAGCGCGTGGGTGGGG+TGG - chr7_2:86970197-86970216 None:intergenic 70.0%
CCCTGAGCTGGTGGTTGGGC+AGG - chr7_2:86976058-86976077 None:intergenic 70.0%
GCGGGATAGCCCTGAGCTGG+TGG - chr7_2:86976067-86976086 None:intergenic 70.0%
! GCGCGTGGGTGGGGTGGGGT+GGG - chr7_2:86970191-86970210 None:intergenic 80.0%
! AGCGCGTGGGTGGGGTGGGG+TGG - chr7_2:86970192-86970211 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 86969979 86976553 86969979 ID=Msa1085960;Name=Msa1085960
chr7_2 mRNA 86969979 86976553 86969979 ID=Msa1085960-mRNA-1;Parent=Msa1085960;Name=Msa1085960-mRNA-1;_AED=0.07;_eAED=0.07;_QI=326|1|1|1|0.75|0.77|9|370|263
chr7_2 exon 86969979 86970248 86969979 ID=Msa1085960-mRNA-1:exon:23616;Parent=Msa1085960-mRNA-1
chr7_2 exon 86970357 86970512 86970357 ID=Msa1085960-mRNA-1:exon:23617;Parent=Msa1085960-mRNA-1
chr7_2 exon 86970619 86970640 86970619 ID=Msa1085960-mRNA-1:exon:23618;Parent=Msa1085960-mRNA-1
chr7_2 exon 86971857 86971913 86971857 ID=Msa1085960-mRNA-1:exon:23619;Parent=Msa1085960-mRNA-1
chr7_2 exon 86971994 86972075 86971994 ID=Msa1085960-mRNA-1:exon:23620;Parent=Msa1085960-mRNA-1
chr7_2 exon 86975230 86975325 86975230 ID=Msa1085960-mRNA-1:exon:23621;Parent=Msa1085960-mRNA-1
chr7_2 exon 86975574 86975698 86975574 ID=Msa1085960-mRNA-1:exon:23622;Parent=Msa1085960-mRNA-1
chr7_2 exon 86975789 86975807 86975789 ID=Msa1085960-mRNA-1:exon:23623;Parent=Msa1085960-mRNA-1
chr7_2 exon 86975893 86976553 86975893 ID=Msa1085960-mRNA-1:exon:23624;Parent=Msa1085960-mRNA-1
chr7_2 five_prime_UTR 86969979 86970248 86969979 ID=Msa1085960-mRNA-1:five_prime_utr;Parent=Msa1085960-mRNA-1
chr7_2 five_prime_UTR 86970357 86970412 86970357 ID=Msa1085960-mRNA-1:five_prime_utr;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86970413 86970512 86970413 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86970619 86970640 86970619 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86971857 86971913 86971857 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86971994 86972075 86971994 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86975230 86975325 86975230 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86975574 86975698 86975574 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86975789 86975807 86975789 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 CDS 86975893 86976183 86975893 ID=Msa1085960-mRNA-1:cds;Parent=Msa1085960-mRNA-1
chr7_2 three_prime_UTR 86976184 86976553 86976184 ID=Msa1085960-mRNA-1:three_prime_utr;Parent=Msa1085960-mRNA-1
Gene Sequence

>Msa1085960

ATGGCGAATCAGCAGAATCTTGAGAAAATGCAACTCCGGCAGAATTACCGGAATCTATGGCACACTGATCTCATGAGAACTATCCAGGTCGATACTCCATATTGCTGCTTATCCTTGTGGTGTGCGCCATGTGTATCATACTTGCTTCGCAAACGAGCCCTTTATGATGATATGTCAAGATACACATGCTGTGCTGGTTACATGCCCTGCAGTGGTAGGTGTGGAGAAAGTAAATGTCCTGAATTTTGCCTCTGTACTGAGGTTTTTCTCTGCTTTGGAAATTCAGTGGCCTCAACTCGCTTTCTGTTGCAAGATGAATTTAACATTCAAACTACGCAGTGTGATAATTGCATTATTGGTTTCATGCTTTGCCTTAACCAAGTTGCATGCATATTCTCTATTGTTGCCATGATTGTGGGAAGTGAGGAAATTTCGGAGGCTTCTCAAATACTATCTTGTTTGGCTGACCTTGTTTACTGCTCGGTGTGTGCGTGCATGCAGACTCAGCACAAGGTTGAAATGGACAAGCGTGACGGGAAGTTTGGGCCGCAACCAGTGATGGCAGTGCCTCCTGTACAGCAAATGTCCCGCATTGATCAACCAGTTCCTCCTTCTGTTGGGTATGCACCACAACCAGCATATGGGCAGAATTATGGTTATCCACCTGCCCAACCACCAGCTCAGGGCTATCCCGCTACTGGTTACCCCCCTGCTGCTTATCCTCCACAACAAGGATATCCCCCTGCTGCTTATCCTCCACAAGGATATCCCCCTTCTGGTTATTCTAGGTGA

Protein sequence

>Msa1085960

MANQQNLEKMQLRQNYRNLWHTDLMRTIQVDTPYCCLSLWCAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMLCLNQVACIFSIVAMIVGSEEISEASQILSCLADLVYCSVCACMQTQHKVEMDKRDGKFGPQPVMAVPPVQQMSRIDQPVPPSVGYAPQPAYGQNYGYPPAQPPAQGYPATGYPPAAYPPQQGYPPAAYPPQGYPPSGYSR*