Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576990 | XP_013447079.1 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576990 | B7FIY1 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0576990 | -0.800800 | 1.216002e-48 | -8.615850e-47 |
| Msa0038350 | Msa0576990 | 0.819575 | 1.080628e-52 | -8.615850e-47 |
| Msa0039420 | Msa0576990 | 0.805010 | 1.641125e-49 | -8.615850e-47 |
| Msa0044710 | Msa0576990 | -0.802922 | 4.457145e-49 | -8.615850e-47 |
| Msa0050770 | Msa0576990 | -0.803997 | 2.668598e-49 | -8.615850e-47 |
| Msa0071910 | Msa0576990 | 0.822111 | 2.821816e-53 | -8.615850e-47 |
| Msa0094100 | Msa0576990 | -0.825451 | 4.653553e-54 | -8.615850e-47 |
| Msa0105340 | Msa0576990 | -0.807488 | 4.933242e-50 | -8.615850e-47 |
| Msa0106370 | Msa0576990 | 0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0158020 | Msa0576990 | -0.822190 | 2.704759e-53 | -8.615850e-47 |
| Msa0164360 | Msa0576990 | -0.876773 | 1.069052e-68 | -8.615850e-47 |
| Msa0170580 | Msa0576990 | -0.804323 | 2.283143e-49 | -8.615850e-47 |
| Msa0178350 | Msa0576990 | -0.818965 | 1.488049e-52 | -8.615850e-47 |
| Msa0182930 | Msa0576990 | -0.801593 | 8.369505e-49 | -8.615850e-47 |
| Msa0185480 | Msa0576990 | -0.826837 | 2.179364e-54 | -8.615850e-47 |
| Msa0185640 | Msa0576990 | 0.888267 | 6.867963e-73 | -8.615850e-47 |
| Msa0196130 | Msa0576990 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0198440 | Msa0576990 | -0.815280 | 1.002104e-51 | -8.615850e-47 |
| Msa0199730 | Msa0576990 | -0.806072 | 9.823306e-50 | -8.615850e-47 |
| Msa0200950 | Msa0576990 | 0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0203640 | Msa0576990 | -0.801123 | 1.044416e-48 | -8.615850e-47 |
| Msa0208630 | Msa0576990 | -0.800952 | 1.132201e-48 | -8.615850e-47 |
| Msa0226250 | Msa0576990 | -0.805939 | 1.047855e-49 | -8.615850e-47 |
| Msa0367140 | Msa0576990 | 0.836506 | 8.991419e-57 | -8.615850e-47 |
| Msa0371420 | Msa0576990 | 0.828628 | 8.087638e-55 | -8.615850e-47 |
| Msa0375060 | Msa0576990 | 0.800030 | 1.745021e-48 | -8.615850e-47 |
| Msa0411000 | Msa0576990 | -0.831637 | 1.490781e-55 | -8.615850e-47 |
| Msa0414070 | Msa0576990 | -0.819628 | 1.051285e-52 | -8.615850e-47 |
| Msa0418000 | Msa0576990 | -0.813234 | 2.837619e-51 | -8.615850e-47 |
| Msa0419620 | Msa0576990 | 0.848671 | 5.282162e-60 | -8.615850e-47 |
| Msa0455230 | Msa0576990 | -0.829547 | 4.843413e-55 | -8.615850e-47 |
| Msa0459730 | Msa0576990 | 0.832596 | 8.640127e-56 | -8.615850e-47 |
| Msa0465670 | Msa0576990 | 0.815799 | 7.680607e-52 | -8.615850e-47 |
| Msa0465680 | Msa0576990 | 0.865506 | 5.619489e-65 | -8.615850e-47 |
| Msa0240780 | Msa0576990 | -0.815167 | 1.061811e-51 | -8.615850e-47 |
| Msa0252180 | Msa0576990 | -0.802357 | 5.830022e-49 | -8.615850e-47 |
| Msa0258220 | Msa0576990 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0258670 | Msa0576990 | 0.843002 | 1.830804e-58 | -8.615850e-47 |
| Msa0260270 | Msa0576990 | 0.819451 | 1.153232e-52 | -8.615850e-47 |
| Msa0265820 | Msa0576990 | -0.827518 | 1.496676e-54 | -8.615850e-47 |
| Msa0265980 | Msa0576990 | 0.831812 | 1.349962e-55 | -8.615850e-47 |
| Msa0270440 | Msa0576990 | 0.832939 | 7.098100e-56 | -8.615850e-47 |
| Msa0278670 | Msa0576990 | -0.813471 | 2.517621e-51 | -8.615850e-47 |
| Msa0280660 | Msa0576990 | 0.855782 | 5.006673e-62 | -8.615850e-47 |
| Msa0282170 | Msa0576990 | -0.810723 | 1.000379e-50 | -8.615850e-47 |
| Msa0288240 | Msa0576990 | -0.807836 | 4.161044e-50 | -8.615850e-47 |
| Msa0288330 | Msa0576990 | -0.808183 | 3.509314e-50 | -8.615850e-47 |
| Msa0295640 | Msa0576990 | 0.800653 | 1.302776e-48 | -8.615850e-47 |
| Msa0309080 | Msa0576990 | 0.834689 | 2.592473e-56 | -8.615850e-47 |
| Msa0326670 | Msa0576990 | -0.837234 | 5.861832e-57 | -8.615850e-47 |
| Msa0331590 | Msa0576990 | -0.808464 | 3.057264e-50 | -8.615850e-47 |
| Msa0342340 | Msa0576990 | 0.877877 | 4.417137e-69 | -8.615850e-47 |
| Msa0363460 | Msa0576990 | -0.830901 | 2.261243e-55 | -8.615850e-47 |
| Msa0506530 | Msa0576990 | 0.861019 | 1.376469e-63 | -8.615850e-47 |
| Msa0511720 | Msa0576990 | 0.836674 | 8.149991e-57 | -8.615850e-47 |
| Msa0524050 | Msa0576990 | -0.804754 | 1.855968e-49 | -8.615850e-47 |
| Msa0524890 | Msa0576990 | 0.836488 | 9.084837e-57 | -8.615850e-47 |
| Msa0524970 | Msa0576990 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0526450 | Msa0576990 | 0.876271 | 1.594474e-68 | -8.615850e-47 |
| Msa0526640 | Msa0576990 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0527250 | Msa0576990 | -0.816465 | 5.452789e-52 | -8.615850e-47 |
| Msa0531970 | Msa0576990 | 0.848665 | 5.303434e-60 | -8.615850e-47 |
| Msa0540070 | Msa0576990 | -0.836079 | 1.154446e-56 | -8.615850e-47 |
| Msa0543900 | Msa0576990 | -0.816347 | 5.794477e-52 | -8.615850e-47 |
| Msa0557680 | Msa0576990 | -0.809144 | 2.188039e-50 | -8.615850e-47 |
| Msa0563140 | Msa0576990 | -0.819312 | 1.240969e-52 | -8.615850e-47 |
| Msa0564490 | Msa0576990 | -0.802505 | 5.433709e-49 | -8.615850e-47 |
| Msa0571250 | Msa0576990 | -0.806392 | 8.410558e-50 | -8.615850e-47 |
| Msa0576400 | Msa0576990 | 0.833214 | 6.064920e-56 | -8.615850e-47 |
| Msa0576990 | Msa0577230 | -0.809437 | 1.893469e-50 | -8.615850e-47 |
| Msa0576990 | Msa0599770 | -0.811126 | 8.183008e-51 | -8.615850e-47 |
| Msa0576990 | Msa0616560 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0576990 | Msa0617370 | -0.800407 | 1.462624e-48 | -8.615850e-47 |
| Msa0576990 | Msa0621890 | -0.836976 | 6.823457e-57 | -8.615850e-47 |
| Msa0576990 | Msa0629370 | -0.812209 | 4.757841e-51 | -8.615850e-47 |
| Msa0576990 | Msa0640380 | -0.822214 | 2.670061e-53 | -8.615850e-47 |
| Msa0576990 | Msa0647450 | 0.849431 | 3.248858e-60 | -8.615850e-47 |
| Msa0576990 | Msa0655990 | 0.822692 | 2.067199e-53 | -8.615850e-47 |
| Msa0576990 | Msa0656270 | -0.818224 | 2.191428e-52 | -8.615850e-47 |
| Msa0576990 | Msa0678820 | -0.806322 | 8.702328e-50 | -8.615850e-47 |
| Msa0576990 | Msa0684190 | 0.811247 | 7.702069e-51 | -8.615850e-47 |
| Msa0576990 | Msa0688550 | -0.813720 | 2.218831e-51 | -8.615850e-47 |
| Msa0576990 | Msa0697140 | -0.827028 | 1.961226e-54 | -8.615850e-47 |
| Msa0576990 | Msa0699920 | 0.824007 | 1.018958e-53 | -8.615850e-47 |
| Msa0576990 | Msa0700070 | -0.817179 | 3.770600e-52 | -8.615850e-47 |
| Msa0576990 | Msa0704470 | 0.839888 | 1.210339e-57 | -8.615850e-47 |
| Msa0576990 | Msa0704550 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
| Msa0576990 | Msa0714600 | -0.819942 | 8.911070e-53 | -8.615850e-47 |
| Msa0576990 | Msa0715310 | -0.806004 | 1.015107e-49 | -8.615850e-47 |
| Msa0576990 | Msa0715720 | -0.808586 | 2.879376e-50 | -8.615850e-47 |
| Msa0576990 | Msa0716230 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0576990 | Msa0719490 | 0.827752 | 1.315433e-54 | -8.615850e-47 |
| Msa0576990 | Msa0722930 | -0.876489 | 1.341011e-68 | -8.615850e-47 |
| Msa0576990 | Msa0723140 | -0.858501 | 7.887903e-63 | -8.615850e-47 |
| Msa0576990 | Msa0723210 | -0.809636 | 1.716028e-50 | -8.615850e-47 |
| Msa0576990 | Msa0724050 | -0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa0576990 | Msa0750380 | -0.821492 | 3.923004e-53 | -8.615850e-47 |
| Msa0576990 | Msa0766100 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0576990 | Msa0773610 | -0.814207 | 1.732522e-51 | -8.615850e-47 |
| Msa0576990 | Msa0810350 | 0.823037 | 1.717895e-53 | -8.615850e-47 |
| Msa0576990 | Msa0828570 | -0.808423 | 3.120369e-50 | -8.615850e-47 |
| Msa0576990 | Msa0830720 | -0.812342 | 4.449678e-51 | -8.615850e-47 |
| Msa0576990 | Msa0835920 | -0.821724 | 3.466833e-53 | -8.615850e-47 |
| Msa0576990 | Msa0837990 | -0.811329 | 7.394603e-51 | -8.615850e-47 |
| Msa0576990 | Msa0843280 | -0.821666 | 3.576925e-53 | -8.615850e-47 |
| Msa0576990 | Msa0845590 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
| Msa0576990 | Msa0847200 | -0.833547 | 5.007992e-56 | -8.615850e-47 |
| Msa0576990 | Msa0900200 | -0.814786 | 1.290488e-51 | -8.615850e-47 |
| Msa0576990 | Msa0909710 | -0.814308 | 1.646247e-51 | -8.615850e-47 |
| Msa0576990 | Msa0923260 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
| Msa0576990 | Msa0937940 | -0.801264 | 9.773647e-49 | -8.615850e-47 |
| Msa0576990 | Msa0944770 | -0.817497 | 3.198374e-52 | -8.615850e-47 |
| Msa0576990 | Msa0946120 | -0.800320 | 1.523187e-48 | -8.615850e-47 |
| Msa0576990 | Msa0951720 | -0.830661 | 2.590602e-55 | -8.615850e-47 |
| Msa0576990 | Msa0961420 | 0.869146 | 3.851842e-66 | -8.615850e-47 |
| Msa0576990 | Msa0965520 | -0.809457 | 1.874705e-50 | -8.615850e-47 |
| Msa0576990 | Msa0968320 | 0.819155 | 1.347557e-52 | -8.615850e-47 |
| Msa0576990 | Msa0980440 | -0.814378 | 1.588435e-51 | -8.615850e-47 |
| Msa0576990 | Msa0981010 | -0.816887 | 4.387140e-52 | -8.615850e-47 |
| Msa0576990 | Msa0988500 | -0.827918 | 1.199596e-54 | -8.615850e-47 |
| Msa0576990 | Msa0989490 | 0.812280 | 4.589027e-51 | -8.615850e-47 |
| Msa0576990 | Msa1000020 | -0.822977 | 1.774562e-53 | -8.615850e-47 |
| Msa0576990 | Msa1007610 | 0.811178 | 7.970503e-51 | -8.615850e-47 |
| Msa0576990 | Msa1018020 | 0.826681 | 2.373792e-54 | -8.615850e-47 |
| Msa0576990 | Msa1019840 | 0.849253 | 3.640760e-60 | -8.615850e-47 |
| Msa0576990 | Msa1036390 | -0.817170 | 3.788365e-52 | -8.615850e-47 |
| Msa0576990 | Msa1076680 | -0.803904 | 2.790315e-49 | -8.615850e-47 |
| Msa0576990 | Msa1077390 | -0.806465 | 8.117337e-50 | -8.615850e-47 |
| Msa0576990 | Msa1080790 | -0.837888 | 3.984931e-57 | -8.615850e-47 |
| Msa0576990 | Msa1085960 | 0.972206 | 2.171670e-134 | -8.615850e-47 |
| Msa0576990 | Msa1087530 | -0.811633 | 6.350505e-51 | -8.615850e-47 |
| Msa0576990 | Msa1118930 | -0.841680 | 4.102813e-58 | -8.615850e-47 |
| Msa0576990 | Msa1131940 | 0.838419 | 2.907934e-57 | -8.615850e-47 |
| Msa0576990 | Msa1141250 | 0.824910 | 6.247033e-54 | -8.615850e-47 |
| Msa0576990 | Msa1186570 | -0.807309 | 5.382588e-50 | -8.615850e-47 |
| Msa0576990 | Msa1204980 | 0.878728 | 2.220091e-69 | -8.615850e-47 |
| Msa0576990 | Msa1205010 | 0.877974 | 4.085284e-69 | -8.615850e-47 |
| Msa0576990 | Msa1207480 | 0.809585 | 1.759589e-50 | -8.615850e-47 |
| Msa0576990 | Msa1207670 | 0.840900 | 6.579147e-58 | -8.615850e-47 |
| Msa0576990 | Msa1208710 | -0.809027 | 2.317405e-50 | -8.615850e-47 |
| Msa0576990 | Msa1213440 | 0.835968 | 1.231685e-56 | -8.615850e-47 |
| Msa0576990 | Msa1217810 | -0.830920 | 2.237472e-55 | -8.615850e-47 |
| Msa0576990 | Msa1220230 | -0.804082 | 2.562122e-49 | -8.615850e-47 |
| Msa0576990 | Msa1221200 | 0.820019 | 8.557915e-53 | -8.615850e-47 |
| Msa0576990 | Msa1228210 | -0.803825 | 2.897928e-49 | -8.615850e-47 |
| Msa0576990 | Msa1252070 | -0.828162 | 1.048098e-54 | -8.615850e-47 |
| Msa0576990 | Msa1256540 | 0.882508 | 9.825016e-71 | -8.615850e-47 |
| Msa0576990 | Msa1257870 | 0.884194 | 2.360889e-71 | -8.615850e-47 |
| Msa0576990 | Msa1258950 | -0.814561 | 1.446806e-51 | -8.615850e-47 |
| Msa0576990 | Msa1260490 | 0.845428 | 4.086265e-59 | -8.615850e-47 |
| Msa0576990 | Msa1262130 | -0.804576 | 2.021683e-49 | -8.615850e-47 |
| Msa0576990 | Msa1265820 | 0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa0576990 | Msa1265960 | -0.830618 | 2.653592e-55 | -8.615850e-47 |
| Msa0576990 | Msa1279680 | 0.810525 | 1.103972e-50 | -8.615850e-47 |
| Msa0576990 | Msa1280130 | -0.812962 | 3.256286e-51 | -8.615850e-47 |
| Msa0576990 | Msa1282920 | -0.810329 | 1.216518e-50 | -8.615850e-47 |
| Msa0576990 | Msa1289830 | 0.823754 | 1.168166e-53 | -8.615850e-47 |
| Msa0576990 | Msa1292730 | -0.803971 | 2.702632e-49 | -8.615850e-47 |
| Msa0576990 | Msa1295020 | 0.806804 | 6.884058e-50 | -8.615850e-47 |
| Msa0576990 | Msa1296960 | 0.887155 | 1.828660e-72 | -8.615850e-47 |
| Msa0576990 | Msa1297090 | -0.812369 | 4.388645e-51 | -8.615850e-47 |
| Msa0576990 | Msa1316560 | 0.819646 | 1.041304e-52 | -8.615850e-47 |
| Msa0576990 | Msa1322190 | -0.827243 | 1.741771e-54 | -8.615850e-47 |
| Msa0576990 | Msa1330000 | 0.815983 | 6.988310e-52 | -8.615850e-47 |
| Msa0576990 | Msa1331690 | 0.840858 | 6.751534e-58 | -8.615850e-47 |
| Msa0576990 | Msa1332140 | 0.817123 | 3.881989e-52 | -8.615850e-47 |
| Msa0576990 | Msa1335970 | 0.824519 | 7.726591e-54 | -8.615850e-47 |
| Msa0576990 | Msa1340620 | -0.808074 | 3.702577e-50 | -8.615850e-47 |
| Msa0576990 | Msa1343820 | -0.802738 | 4.866251e-49 | -8.615850e-47 |
| Msa0576990 | Msa1347290 | -0.817575 | 3.070820e-52 | -8.615850e-47 |
| Msa0576990 | Msa1358870 | 0.805838 | 1.100051e-49 | -8.615850e-47 |
| Msa0576990 | Msa1363220 | 0.883835 | 3.203947e-71 | -8.615850e-47 |
| Msa0576990 | Msa1370910 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0576990 | Msa1371580 | -0.817278 | 3.583492e-52 | -8.615850e-47 |
| Msa0576990 | Msa1379710 | -0.812458 | 4.196645e-51 | -8.615850e-47 |
| Msa0576990 | Msa1384120 | 0.850841 | 1.307874e-60 | -8.615850e-47 |
| Msa0576990 | Msa1423450 | -0.825070 | 5.727220e-54 | -8.615850e-47 |
| Msa0576990 | Msa1431000 | -0.834776 | 2.464139e-56 | -8.615850e-47 |
| Msa0576990 | Msa1438270 | -0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa0576990 | Msa1447560 | -0.845956 | 2.938651e-59 | -8.615850e-47 |
| Msa0576990 | Msa1450020 | -0.810122 | 1.348752e-50 | -8.615850e-47 |
| Msa0576990 | Msa1451620 | 0.805108 | 1.565278e-49 | -8.615850e-47 |
| Msa0576990 | Msa1454910 | 0.804879 | 1.747717e-49 | -8.615850e-47 |
| Msa0576990 | Msa1457670 | 0.806364 | 8.528640e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576990 | MtrunA17_Chr8g0387261 | 98.479 | 263 | 4 | 0 | 1 | 263 | 1 | 263 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576990 | AT4G23470.1 | 72.308 | 260 | 51 | 5 | 4 | 263 | 3 | 241 | 2.77e-134 | 379 |
| Msa0576990 | AT1G63830.1 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0576990 | AT1G63830.2 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0576990 | AT1G63830.3 | 77.500 | 240 | 42 | 4 | 2 | 241 | 3 | 230 | 3.24e-132 | 373 |
| Msa0576990 | AT4G23470.3 | 77.273 | 220 | 43 | 2 | 4 | 223 | 3 | 215 | 2.97e-127 | 361 |
| Msa0576990 | AT5G41390.1 | 77.778 | 216 | 47 | 1 | 3 | 218 | 4 | 218 | 1.81e-124 | 355 |
| Msa0576990 | AT1G63830.5 | 79.897 | 194 | 27 | 4 | 48 | 241 | 1 | 182 | 1.12e-104 | 301 |
| Msa0576990 | AT1G63830.4 | 81.875 | 160 | 29 | 0 | 2 | 161 | 3 | 162 | 1.61e-97 | 283 |
| Msa0576990 | AT4G23470.2 | 71.845 | 206 | 37 | 5 | 58 | 263 | 1 | 185 | 2.77e-97 | 283 |
| Msa0576990 | AT5G41390.2 | 80.124 | 161 | 31 | 1 | 58 | 218 | 1 | 160 | 1.18e-91 | 270 |
| Msa0576990 | AT4G23470.4 | 78.313 | 166 | 29 | 2 | 58 | 223 | 1 | 159 | 1.90e-90 | 265 |
Find 131 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCAAAGTCTTTATATTAT+TGG | 0.180155 | 4_1:+81168117 | None:intergenic |
| CTATTATTGCACATATTTCT+TGG | 0.218807 | 4_1:+81161704 | None:intergenic |
| AGACACCTATTGATTGTTTC+AGG | 0.231749 | 4_1:-81162027 | Msa0576990:three_prime_UTR |
| AGCGCGTGGGTGGGGTGGGG+TGG | 0.240516 | 4_1:+81168053 | None:intergenic |
| GCGATTTAATGTGTGATATT+AGG | 0.248116 | 4_1:-81161747 | Msa0576990:three_prime_UTR |
| TTTGACTTCAATTTATATAT+TGG | 0.254913 | 4_1:-81161838 | Msa0576990:three_prime_UTR |
| GACAAGCGTGACGGGAAGTT+TGG | 0.287119 | 4_1:-81162328 | Msa0576990:CDS |
| TGTGGGAAGTGAGGAAATTT+CGG | 0.298616 | 4_1:-81162612 | Msa0576990:CDS |
| CCAGCATATGGGCAGAATTA+TGG | 0.301754 | 4_1:-81162217 | Msa0576990:CDS |
| CCCTGAGCTGGTGGTTGGGC+AGG | 0.324739 | 4_1:+81162187 | None:intergenic |
| TGCAACTCCGGCAGAATTAC+CGG | 0.334750 | 4_1:-81167801 | Msa0576990:CDS |
| AGGCTCACAGCCGCCAAGTT+TGG | 0.341230 | 4_1:-81161727 | Msa0576990:three_prime_UTR |
| ACCTTGACATATCATCATAA+AGG | 0.341368 | 4_1:+81166349 | None:intergenic |
| TTCTCAAATACTATCTTGTT+TGG | 0.350032 | 4_1:-81162585 | Msa0576990:CDS |
| GGCAGAATTACCGGAATCTA+TGG | 0.355115 | 4_1:-81167792 | Msa0576990:CDS |
| ACCTGCCCAACCACCAGCTC+AGG | 0.357224 | 4_1:-81162188 | Msa0576990:CDS |
| TTGTTTGGTTATGTGCAATA+TGG | 0.357347 | 4_1:-81161802 | Msa0576990:three_prime_UTR |
| GAAAGCGCGTGGGTGGGGTG+GGG | 0.372529 | 4_1:+81168050 | None:intergenic |
| AGAAAGCGCGTGGGTGGGGT+GGG | 0.375901 | 4_1:+81168049 | None:intergenic |
| GGTGTTTATATAATCTTGTT+TGG | 0.382421 | 4_1:-81161817 | Msa0576990:three_prime_UTR |
| TCTCTCAGATCTATCCATCT+AGG | 0.387277 | 4_1:-81167893 | Msa0576990:intron |
| GAAAATCAAATCAAATGAAA+TGG | 0.391155 | 4_1:+81168082 | None:intergenic |
| TCAGTCAGAAATCCAAACTT+AGG | 0.399397 | 4_1:+81161897 | None:intergenic |
| GACTCAGCACAAGGTTGAAA+TGG | 0.402052 | 4_1:-81162350 | Msa0576990:CDS |
| GCGCGTGGGTGGGGTGGGGT+GGG | 0.403093 | 4_1:+81168054 | None:intergenic |
| ACATATTTCTTGGCCAAACT+TGG | 0.405256 | 4_1:+81161714 | None:intergenic |
| AACCAGTTCCTCCTTCTGTT+GGG | 0.408203 | 4_1:-81162252 | Msa0576990:CDS |
| CAACCAGTTCCTCCTTCTGT+TGG | 0.416484 | 4_1:-81162253 | Msa0576990:CDS |
| ACAAGCGTGACGGGAAGTTT+GGG | 0.424681 | 4_1:-81162327 | Msa0576990:CDS |
| TGAGCTGGTGGTTGGGCAGG+TGG | 0.425407 | 4_1:+81162190 | None:intergenic |
| TCAGTACAGAGGCAAAATTC+AGG | 0.426098 | 4_1:+81166190 | None:intergenic |
| TATGCACCACAACCAGCATA+TGG | 0.434907 | 4_1:-81162229 | Msa0576990:CDS |
| GGAGAAGTAGTAACCCTAGA+TGG | 0.437950 | 4_1:+81167879 | None:intergenic |
| CCTTGACATATCATCATAAA+GGG | 0.442804 | 4_1:+81166350 | None:intergenic |
| AGAGAGAAAGCGCGTGGGTG+GGG | 0.445983 | 4_1:+81168045 | None:intergenic |
| ATAGCCCTGAGCTGGTGGTT+GGG | 0.448583 | 4_1:+81162183 | None:intergenic |
| GATAGCCCTGAGCTGGTGGT+TGG | 0.453696 | 4_1:+81162182 | None:intergenic |
| ATGCGGGACATTTGCTGTAC+AGG | 0.454843 | 4_1:+81162280 | None:intergenic |
| TTCCTCACTTCCCACAATCA+TGG | 0.455138 | 4_1:+81162619 | None:intergenic |
| ATATGCATGCAACTTGGTTA+AGG | 0.460046 | 4_1:+81162654 | None:intergenic |
| CGGTTCCTGAAACAATCAAT+AGG | 0.461457 | 4_1:+81162022 | None:intergenic |
| CAGTCAGAAATCCAAACTTA+GGG | 0.462224 | 4_1:+81161898 | None:intergenic |
| ACTCCCACTTGGTAAACGTT+GGG | 0.463735 | 4_1:-81168267 | None:intergenic |
| GAGAAAGCGCGTGGGTGGGG+TGG | 0.471365 | 4_1:+81168048 | None:intergenic |
| TGAAGTCAAAAGTATAAGAA+TGG | 0.473824 | 4_1:+81161851 | None:intergenic |
| TTCTCCACACCTACCACTGC+AGG | 0.479185 | 4_1:+81166222 | None:intergenic |
| TACCCAACAGAAGGAGGAAC+TGG | 0.482353 | 4_1:+81162250 | None:intergenic |
| GGCACTGCCATCACTGGTTG+CGG | 0.482881 | 4_1:+81162304 | None:intergenic |
| CTCTATTGTTGCCATGATTG+TGG | 0.490690 | 4_1:-81162630 | Msa0576990:CDS |
| GATCAGTGTGCCATAGATTC+CGG | 0.496322 | 4_1:+81167782 | None:intergenic |
| TCCAGATACACATGCTGTGC+TGG | 0.497369 | 4_1:-81166253 | Msa0576990:intron |
| TCTTACAAACGACGCATCGT+AGG | 0.503435 | 4_1:+81168211 | None:intergenic |
| TTGAAATGGACAAGCGTGAC+GGG | 0.503821 | 4_1:-81162336 | Msa0576990:CDS |
| TATTTCTTGGCCAAACTTGG+CGG | 0.506673 | 4_1:+81161717 | None:intergenic |
| TGTTGTGGAGGATAAGCAGC+AGG | 0.509075 | 4_1:+81162142 | None:intergenic |
| CCTTGTGGAGGATAAGCAGC+AGG | 0.512049 | 4_1:+81162109 | None:intergenic |
| CTCTCAGATCTATCCATCTA+GGG | 0.514583 | 4_1:-81167892 | Msa0576990:intron |
| TTCTGCCCATATGCTGGTTG+TGG | 0.520583 | 4_1:+81162223 | None:intergenic |
| TCTATTGTTGCCATGATTGT+GGG | 0.521129 | 4_1:-81162629 | Msa0576990:CDS |
| CCATAATTCTGCCCATATGC+TGG | 0.523656 | 4_1:+81162217 | None:intergenic |
| TAGGGTTACTACTTCTCCTC+CGG | 0.526134 | 4_1:-81167874 | Msa0576990:five_prime_UTR |
| AGAGAGAGAAAGCGCGTGGG+TGG | 0.527835 | 4_1:+81168043 | None:intergenic |
| GCTCAGGGCTATCCCGCTAC+TGG | 0.528162 | 4_1:-81162172 | Msa0576990:CDS |
| TGATCTCATGAGAACTATCC+AGG | 0.529386 | 4_1:-81167764 | Msa0576990:CDS |
| GTAGCGGGATAGCCCTGAGC+TGG | 0.535476 | 4_1:+81162175 | None:intergenic |
| ACAGGAGGCACTGCCATCAC+TGG | 0.536277 | 4_1:+81162298 | None:intergenic |
| TACTCCCACTTGGTAAACGT+TGG | 0.539005 | 4_1:-81168268 | None:intergenic |
| AGGAACTGGTTGATCAATGC+GGG | 0.542027 | 4_1:+81162264 | None:intergenic |
| AATATCACACATTAAATCGC+GGG | 0.542534 | 4_1:+81161750 | None:intergenic |
| AAAGTCTTTATATTATTGGC+CGG | 0.542798 | 4_1:+81168121 | None:intergenic |
| GTTTGGGCCGCAACCAGTGA+TGG | 0.543967 | 4_1:-81162311 | Msa0576990:CDS |
| TCTCTGCTTTGGAAATTCAG+TGG | 0.544883 | 4_1:-81163007 | Msa0576990:CDS |
| TAGGGTGTGTGCGTGCATGC+AGG | 0.544903 | 4_1:-81162456 | Msa0576990:intron |
| CAGATTGCTGCTTATCCTTG+TGG | 0.547142 | 4_1:-81167626 | Msa0576990:CDS |
| TTCTTCTTCTTCTTTGCCGG+AGG | 0.548168 | 4_1:+81167858 | None:intergenic |
| AAATTTAGAGCAGTTTGTGT+TGG | 0.555860 | 4_1:-81162053 | Msa0576990:three_prime_UTR |
| GTTACATGCCCTGCAGTGGT+AGG | 0.556389 | 4_1:-81166231 | Msa0576990:CDS |
| TAGAGAATATGCATGCAACT+TGG | 0.557546 | 4_1:+81162648 | None:intergenic |
| ATCTTGAGAAAATGCAACTC+CGG | 0.559310 | 4_1:-81167813 | Msa0576990:CDS |
| CTTACAAACGACGCATCGTA+GGG | 0.561411 | 4_1:+81168212 | None:intergenic |
| GAGAGAGAAAGCGCGTGGGT+GGG | 0.567611 | 4_1:+81168044 | None:intergenic |
| TATGAACTATTGTAACTGCC+AGG | 0.573029 | 4_1:-81168168 | Msa0576990:five_prime_UTR |
| ATAGATTCCGGTAATTCTGC+CGG | 0.573475 | 4_1:+81167794 | None:intergenic |
| AGAGTGAGTCCTGTCAGCTA+TGG | 0.573495 | 4_1:-81168191 | Msa0576990:five_prime_UTR |
| CCTGCCCAACCACCAGCTCA+GGG | 0.573738 | 4_1:-81162187 | Msa0576990:CDS |
| ATCACCTAGAATAACCAGAA+GGG | 0.579600 | 4_1:+81162080 | None:intergenic |
| ATGCACCACAACCAGCATAT+GGG | 0.582709 | 4_1:-81162228 | Msa0576990:CDS |
| GCGGGATAGCCCTGAGCTGG+TGG | 0.587686 | 4_1:+81162178 | None:intergenic |
| GTTGTGGAGGATAAGCAGCA+GGG | 0.593369 | 4_1:+81162143 | None:intergenic |
| GCTTACATGGAGTATCGACC+TGG | 0.596144 | 4_1:+81167746 | None:intergenic |
| CTTGTGGAGGATAAGCAGCA+GGG | 0.596976 | 4_1:+81162110 | None:intergenic |
| ATTGCTGCTTATCCTTGTGG+TGG | 0.597371 | 4_1:-81167623 | Msa0576990:intron |
| AGAAAGAGAGAGAAAGCGCG+TGG | 0.604158 | 4_1:+81168039 | None:intergenic |
| AAAACTAAACTACTCCCACT+TGG | 0.606103 | 4_1:-81168278 | None:intergenic |
| TAGTTCATACCATAGCTGAC+AGG | 0.606753 | 4_1:+81168182 | None:intergenic |
| CCCTTTATGATGATATGTCA+AGG | 0.608347 | 4_1:-81166350 | Msa0576990:intron |
| CGAAGCAAGTATGATACACA+TGG | 0.611216 | 4_1:+81166381 | None:intergenic |
| TCACCTAGAATAACCAGAAG+GGG | 0.621429 | 4_1:+81162081 | None:intergenic |
| TTATTTGCAGACTCAGCACA+AGG | 0.625897 | 4_1:-81162359 | Msa0576990:intron |
| CGGTGTTGAGTAGAAGACAC+TGG | 0.627767 | 4_1:+81168015 | None:intergenic |
| GCTGGTTACATGCCCTGCAG+TGG | 0.628209 | 4_1:-81166235 | Msa0576990:CDS |
| CCTGCTGCTTATCCTCCACA+AGG | 0.630522 | 4_1:-81162109 | Msa0576990:CDS |
| AATCCCAACGTTTACCAAGT+GGG | 0.633212 | 4_1:+81168264 | None:intergenic |
| TAATATCACACATTAAATCG+CGG | 0.638090 | 4_1:+81161749 | None:intergenic |
| ATGCCCTGCAGTGGTAGGTG+TGG | 0.638395 | 4_1:-81166226 | Msa0576990:CDS |
| GAAAGAGAGAGAAAGCGCGT+GGG | 0.640039 | 4_1:+81168040 | None:intergenic |
| GTCAGAAATCCAAACTTAGG+GGG | 0.640246 | 4_1:+81161900 | None:intergenic |
| TGTGGTGCATACCCAACAGA+AGG | 0.640639 | 4_1:+81162241 | None:intergenic |
| TATCACCTAGAATAACCAGA+AGG | 0.641227 | 4_1:+81162079 | None:intergenic |
| GGGAAGTGAGGAAATTTCGG+AGG | 0.641644 | 4_1:-81162609 | Msa0576990:CDS |
| TTGCAACAGAAAGCGAGTTG+AGG | 0.642740 | 4_1:+81162984 | None:intergenic |
| CGGGACATTTGCTGTACAGG+AGG | 0.642937 | 4_1:+81162283 | None:intergenic |
| TCTCCACACCTACCACTGCA+GGG | 0.646565 | 4_1:+81166223 | None:intergenic |
| TGCCATGATTGTGGGAAGTG+AGG | 0.647664 | 4_1:-81162621 | Msa0576990:CDS |
| GCTGCTTATCCTCCACAACA+AGG | 0.651296 | 4_1:-81162139 | Msa0576990:CDS |
| AGTCTTACGAGCAGTAAACA+AGG | 0.652877 | 4_1:+81162558 | None:intergenic |
| GGTGCATACCCAACAGAAGG+AGG | 0.662450 | 4_1:+81162244 | None:intergenic |
| TTGTGGAGGATAAGCAGCAG+GGG | 0.664484 | 4_1:+81162111 | None:intergenic |
| GTTGAAATGGACAAGCGTGA+CGG | 0.665093 | 4_1:-81162337 | Msa0576990:CDS |
| TTGTGGAGGATAAGCAGCAG+GGG | 0.675822 | 4_1:+81162144 | None:intergenic |
| TAATCCCAACGTTTACCAAG+TGG | 0.676713 | 4_1:+81168263 | None:intergenic |
| CACCTAGAATAACCAGAAGG+GGG | 0.685790 | 4_1:+81162082 | None:intergenic |
| GTTTATATACCTCAGTACAG+AGG | 0.692939 | 4_1:+81166179 | None:intergenic |
| AGTCAGAAATCCAAACTTAG+GGG | 0.693770 | 4_1:+81161899 | None:intergenic |
| TACGAAATTGAAGAAAACAA+CGG | 0.696555 | 4_1:+81162002 | None:intergenic |
| TGTGGAGGATAAGCAGCAGG+GGG | 0.703339 | 4_1:+81162145 | None:intergenic |
| TGTGGAGGATAAGCAGCAGG+GGG | 0.704394 | 4_1:+81162112 | None:intergenic |
| ATCAAGCAGTCATATGTGTG+TGG | 0.708124 | 4_1:-81161966 | Msa0576990:three_prime_UTR |
| GTGGAGGATAAGCAGCAGGG+GGG | 0.717882 | 4_1:+81162146 | None:intergenic |
| ATGGATGACATACCACCACA+AGG | 0.728919 | 4_1:+81167611 | None:intergenic |
| GAGGAACTGGTTGATCAATG+CGG | 0.734048 | 4_1:+81162263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATTAATGATAGAAA+TGG | + | chr4_1:81162297-81162316 | None:intergenic | 10.0% |
| !! | ACTATAAGAAAATTTAAAAA+CGG | + | chr4_1:81165952-81165971 | None:intergenic | 10.0% |
| !!! | CAATAAAAATTGAAAGTATT+TGG | + | chr4_1:81164764-81164783 | None:intergenic | 15.0% |
| !!! | CAAATACTTTCAATTTTTAT+TGG | - | chr4_1:81164762-81164781 | Msa0576990:intron | 15.0% |
| !! | TATATATATTGAAGAGAAAA+GGG | + | chr4_1:81165009-81165028 | None:intergenic | 15.0% |
| !!! | AACCTTTTTTTTTTCATTTT+AGG | - | chr4_1:81166418-81166437 | Msa0576990:intron | 15.0% |
| !! | AACCTAAAATGAAAAAAAAA+AGG | + | chr4_1:81166423-81166442 | None:intergenic | 15.0% |
| !! | TATTTGAATATAGTTGTAAA+AGG | - | chr4_1:81166513-81166532 | Msa0576990:intron | 15.0% |
| !!! | ATATGCAATTTTTTTGTTTA+GGG | - | chr4_1:81167163-81167182 | Msa0576990:intron | 15.0% |
| !!! | ATATGCAATTTTTTTGTTTA+GGG | - | chr4_1:81167163-81167182 | Msa0576990:intron | 15.0% |
| !!! | TTTGACTTCAATTTATATAT+TGG | - | chr4_1:81168136-81168155 | Msa0576990:five_prime_UTR | 15.0% |
| !!! | TGAAATGGAATTTTTGAATA+AGG | + | chr4_1:81161880-81161899 | None:intergenic | 20.0% |
| !! | GAAAATCAAATCAAATGAAA+TGG | + | chr4_1:81161895-81161914 | None:intergenic | 20.0% |
| !! | GAAAATGAAAATAACGAAAT+AGG | + | chr4_1:81162033-81162052 | None:intergenic | 20.0% |
| !! | TGAAAAACACAATAAAATGT+TGG | - | chr4_1:81162787-81162806 | Msa0576990:intron | 20.0% |
| !! | GTAACAATCAATATAAATAC+AGG | + | chr4_1:81162978-81162997 | None:intergenic | 20.0% |
| !! | CTATTAGGAAAATAAGTAAT+AGG | + | chr4_1:81163540-81163559 | None:intergenic | 20.0% |
| !! | CAGAACATTAAATTACTATT+AGG | + | chr4_1:81163555-81163574 | None:intergenic | 20.0% |
| !! | AAAGTCATATAATATGACTA+GGG | - | chr4_1:81163968-81163987 | Msa0576990:intron | 20.0% |
| !! | AGAAAGAAAATACATGTATA+GGG | - | chr4_1:81164004-81164023 | Msa0576990:intron | 20.0% |
| !!! | CTGTTTTTATTGTTGTATTT+GGG | - | chr4_1:81164080-81164099 | Msa0576990:intron | 20.0% |
| !!! | GATCTATACTTTTATTACTA+TGG | - | chr4_1:81164220-81164239 | Msa0576990:intron | 20.0% |
| !! | ATATATATTGAAGAGAAAAG+GGG | + | chr4_1:81165008-81165027 | None:intergenic | 20.0% |
| !! | CTATATATATTGAAGAGAAA+AGG | + | chr4_1:81165010-81165029 | None:intergenic | 20.0% |
| !!! | AGTATATCCTTTGAAATTAT+AGG | - | chr4_1:81165919-81165938 | Msa0576990:intron | 20.0% |
| !!! | GTATATCCTTTGAAATTATA+GGG | - | chr4_1:81165920-81165939 | Msa0576990:intron | 20.0% |
| !!! | TTTAAAACTTCTATCGTATT+AGG | - | chr4_1:81166056-81166075 | Msa0576990:intron | 20.0% |
| !! | ACCAAGATTTAATATTTGAA+AGG | - | chr4_1:81166113-81166132 | Msa0576990:intron | 20.0% |
| !! | TCCTTTCAAATATTAAATCT+TGG | + | chr4_1:81166117-81166136 | None:intergenic | 20.0% |
| !!! | ATTTAGTTCATTATCAACAA+TGG | + | chr4_1:81166288-81166307 | None:intergenic | 20.0% |
| !! | ATTTATTTCATGATCAAATG+AGG | - | chr4_1:81166309-81166328 | Msa0576990:intron | 20.0% |
| !! | TAAATACTATAGTTGAACAA+CGG | + | chr4_1:81166399-81166418 | None:intergenic | 20.0% |
| !!! | CTATAAGTGAAACAATTTTT+TGG | - | chr4_1:81166545-81166564 | Msa0576990:intron | 20.0% |
| !! | TATGAATGAAATAAAGAGAT+GGG | + | chr4_1:81167084-81167103 | None:intergenic | 20.0% |
| !!! | CATATGCAATTTTTTTGTTT+AGG | - | chr4_1:81167162-81167181 | Msa0576990:intron | 20.0% |
| !!! | CATATGCAATTTTTTTGTTT+AGG | - | chr4_1:81167162-81167181 | Msa0576990:intron | 20.0% |
| !!! | TTATGTTTCTTTTGTTTGTA+GGG | - | chr4_1:81167500-81167519 | Msa0576990:intron | 20.0% |
| ! | AAAGTCTTTATATTATTGGC+CGG | + | chr4_1:81161856-81161875 | None:intergenic | 25.0% |
| ! | AGGCAAAGTCTTTATATTAT+TGG | + | chr4_1:81161860-81161879 | None:intergenic | 25.0% |
| ! | TTGAATAACTGTTTGCTTAA+TGG | - | chr4_1:81162538-81162557 | Msa0576990:intron | 25.0% |
| !! | TGATTGTTACTTGATTTAGT+CGG | - | chr4_1:81162988-81163007 | Msa0576990:CDS | 25.0% |
| ! | ATACATATCACACAAACAAA+CGG | + | chr4_1:81163688-81163707 | None:intergenic | 25.0% |
| ! | CATGCATGTAAAAAAAAAGA+AGG | + | chr4_1:81163834-81163853 | None:intergenic | 25.0% |
| ! | ATTTAAGCTCATGCATAAAA+TGG | - | chr4_1:81163932-81163951 | Msa0576990:intron | 25.0% |
| ! | TTTAAGCTCATGCATAAAAT+GGG | - | chr4_1:81163933-81163952 | Msa0576990:intron | 25.0% |
| ! | CAAAGTCATATAATATGACT+AGG | - | chr4_1:81163967-81163986 | Msa0576990:intron | 25.0% |
| ! | GAGAAAGAAAATACATGTAT+AGG | - | chr4_1:81164003-81164022 | Msa0576990:intron | 25.0% |
| !!! | GCTGTTTTTATTGTTGTATT+TGG | - | chr4_1:81164079-81164098 | Msa0576990:intron | 25.0% |
| !! | TTCTTCTACATAGTTTTTGT+TGG | - | chr4_1:81164181-81164200 | Msa0576990:intron | 25.0% |
| !! | TAAAAGTATAGATCAGATGA+GGG | + | chr4_1:81164214-81164233 | None:intergenic | 25.0% |
| !! | ATAAAAGTATAGATCAGATG+AGG | + | chr4_1:81164215-81164234 | None:intergenic | 25.0% |
| ! | GTGTGTACTATGTAATAAAA+CGG | + | chr4_1:81164510-81164529 | None:intergenic | 25.0% |
| ! | TATATATTGAAGAGAAAAGG+GGG | + | chr4_1:81165007-81165026 | None:intergenic | 25.0% |
| ! | AATTGTCAATATTCTGTGAT+TGG | - | chr4_1:81165034-81165053 | Msa0576990:intron | 25.0% |
| !!! | CATATAAACACTGATTTCAA+TGG | + | chr4_1:81165276-81165295 | None:intergenic | 25.0% |
| ! | CATTGAAATCAGTGTTTATA+TGG | - | chr4_1:81165274-81165293 | Msa0576990:intron | 25.0% |
| !! | TGTGTTTATATGGTAGATTT+TGG | - | chr4_1:81165374-81165393 | Msa0576990:intron | 25.0% |
| ! | ATTGCAATTTATCGTGAAAT+TGG | - | chr4_1:81165420-81165439 | Msa0576990:intron | 25.0% |
| !! | TTTTCACTTCTCTCTTAATT+CGG | + | chr4_1:81165604-81165623 | None:intergenic | 25.0% |
| ! | TAACATTGTTCACTACATAA+TGG | - | chr4_1:81165797-81165816 | Msa0576990:intron | 25.0% |
| ! | TGATTAACTAATTTCCTGTT+TGG | - | chr4_1:81165831-81165850 | Msa0576990:intron | 25.0% |
| ! | GATTAACTAATTTCCTGTTT+GGG | - | chr4_1:81165832-81165851 | Msa0576990:intron | 25.0% |
| ! | AATTTCAAAGGATATACTAC+AGG | + | chr4_1:81165917-81165936 | None:intergenic | 25.0% |
| ! | ATTGTTCCCTATAATTTCAA+AGG | + | chr4_1:81165929-81165948 | None:intergenic | 25.0% |
| !! | AAAAGAGGTACAATTAGAAA+TGG | + | chr4_1:81165979-81165998 | None:intergenic | 25.0% |
| !!! | TCTTGGTCAAGTTTTATATT+GGG | + | chr4_1:81166100-81166119 | None:intergenic | 25.0% |
| !!! | ATCTTGGTCAAGTTTTATAT+TGG | + | chr4_1:81166101-81166120 | None:intergenic | 25.0% |
| ! | AAATACTATAGTTGAACAAC+GGG | + | chr4_1:81166398-81166417 | None:intergenic | 25.0% |
| ! | TAAAAGAAAGTAGAAAAGTG+TGG | - | chr4_1:81166650-81166669 | Msa0576990:intron | 25.0% |
| !!! | TAATTATGCATTGTTGTTTC+AGG | - | chr4_1:81166940-81166959 | Msa0576990:intron | 25.0% |
| ! | GTATGAATGAAATAAAGAGA+TGG | + | chr4_1:81167085-81167104 | None:intergenic | 25.0% |
| ! | TTCTCAAATACTATCTTGTT+TGG | - | chr4_1:81167389-81167408 | Msa0576990:intron | 25.0% |
| !!! | CTTATGTTTCTTTTGTTTGT+AGG | - | chr4_1:81167499-81167518 | Msa0576990:intron | 25.0% |
| !!! | GTAAGTATGTTACTTTTTAC+CGG | - | chr4_1:81167540-81167559 | Msa0576990:intron | 25.0% |
| ! | TACGAAATTGAAGAAAACAA+CGG | + | chr4_1:81167975-81167994 | None:intergenic | 25.0% |
| !! | TGAAGTCAAAAGTATAAGAA+TGG | + | chr4_1:81168126-81168145 | None:intergenic | 25.0% |
| ! | GGTGTTTATATAATCTTGTT+TGG | - | chr4_1:81168157-81168176 | Msa0576990:five_prime_UTR | 25.0% |
| ! | TAATATCACACATTAAATCG+CGG | + | chr4_1:81168228-81168247 | None:intergenic | 25.0% |
| AAGTGAAAAAGTCGAAAAAC+CGG | - | chr4_1:81161834-81161853 | Msa0576990:three_prime_UTR | 30.0% | |
| TGTTCTTTCAATCAATCCAA+AGG | + | chr4_1:81161998-81162017 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAGAAA+TGG | - | chr4_1:81162126-81162145 | Msa0576990:CDS | 30.0% | |
| TAAAAAGAGTGATGAAAGTG+TGG | + | chr4_1:81162261-81162280 | None:intergenic | 30.0% | |
| ! | TGCTGTTAAATTGTCGTTTA+TGG | - | chr4_1:81162462-81162481 | Msa0576990:intron | 30.0% |
| ! | CGTTTATGGATTTTAGATCT+TGG | - | chr4_1:81162476-81162495 | Msa0576990:intron | 30.0% |
| ATAATCACACATGTCAGTAT+TGG | + | chr4_1:81162662-81162681 | None:intergenic | 30.0% | |
| !! | CAATGACTGAATTACTTTTG+TGG | - | chr4_1:81162900-81162919 | Msa0576990:intron | 30.0% |
| AATTATTCAGCTTGATCAAC+TGG | + | chr4_1:81163054-81163073 | None:intergenic | 30.0% | |
| ! | TTTGTAAGAAAAGAGTGTAG+TGG | - | chr4_1:81163080-81163099 | Msa0576990:intron | 30.0% |
| ! | TTGTAAGAAAAGAGTGTAGT+GGG | - | chr4_1:81163081-81163100 | Msa0576990:intron | 30.0% |
| TGAATGAGCATCTAAATTCA+AGG | + | chr4_1:81163236-81163255 | None:intergenic | 30.0% | |
| TACAAAGAGATACTTGGAAA+TGG | + | chr4_1:81163319-81163338 | None:intergenic | 30.0% | |
| ACAAAGTACAAAGAGATACT+TGG | + | chr4_1:81163325-81163344 | None:intergenic | 30.0% | |
| AATGAATCATGAACTGACAA+GGG | + | chr4_1:81163411-81163430 | None:intergenic | 30.0% | |
| TAATGAATCATGAACTGACA+AGG | + | chr4_1:81163412-81163431 | None:intergenic | 30.0% | |
| TCAGTTCATGATTCATTACT+TGG | - | chr4_1:81163414-81163433 | Msa0576990:intron | 30.0% | |
| ! | CAGTTGATTGCAATTTTACT+TGG | - | chr4_1:81163468-81163487 | Msa0576990:intron | 30.0% |
| !!! | CAATTTTACTTGGCCTTAAT+AGG | - | chr4_1:81163478-81163497 | Msa0576990:intron | 30.0% |
| TACATTTATGCCTCCTATTA+AGG | + | chr4_1:81163494-81163513 | None:intergenic | 30.0% | |
| CCTTGACATATCATCATAAA+GGG | + | chr4_1:81163627-81163646 | None:intergenic | 30.0% | |
| ACCTTGACATATCATCATAA+AGG | + | chr4_1:81163628-81163647 | None:intergenic | 30.0% | |
| CTTAAATCATGCAATGTCTA+AGG | + | chr4_1:81163919-81163938 | None:intergenic | 30.0% | |
| TTAAGCTCATGCATAAAATG+GGG | - | chr4_1:81163934-81163953 | Msa0576990:intron | 30.0% | |
| !! | GTACAATATTAAGCTTGTTG+CGG | - | chr4_1:81164057-81164076 | Msa0576990:intron | 30.0% |
| CTATGTAGAAGAAACTATCA+AGG | + | chr4_1:81164174-81164193 | None:intergenic | 30.0% | |
| AAGTTGTATGAAATGTTGGA+TGG | + | chr4_1:81164438-81164457 | None:intergenic | 30.0% | |
| AACATTTCATACAACTTCAC+CGG | - | chr4_1:81164441-81164460 | Msa0576990:intron | 30.0% | |
| ! | ATGACATTTTCCTATTAGCT+AGG | - | chr4_1:81164478-81164497 | Msa0576990:intron | 30.0% |
| ! | TGACATTTTCCTATTAGCTA+GGG | - | chr4_1:81164479-81164498 | Msa0576990:intron | 30.0% |
| TATACTGAAGCAAATTATGC+AGG | + | chr4_1:81164619-81164638 | None:intergenic | 30.0% | |
| AGATCACTCTTATTCATAAG+AGG | + | chr4_1:81164662-81164681 | None:intergenic | 30.0% | |
| !! | ATTGAAAGTATTTGGCATTG+TGG | + | chr4_1:81164756-81164775 | None:intergenic | 30.0% |
| !! | GCAACACTGACTTATAAAAA+GGG | + | chr4_1:81164960-81164979 | None:intergenic | 30.0% |
| !!! | CATGTTCAGTTTTAGATACT+TGG | - | chr4_1:81165218-81165237 | Msa0576990:intron | 30.0% |
| !!! | AGTTTTAGATACTTGGACAA+TGG | - | chr4_1:81165225-81165244 | Msa0576990:intron | 30.0% |
| TCAATGGACATTTATGAGTA+TGG | + | chr4_1:81165260-81165279 | None:intergenic | 30.0% | |
| TTTCACTTCTCTCTTAATTC+GGG | + | chr4_1:81165603-81165622 | None:intergenic | 30.0% | |
| TTATAAAGAGGAAGTGAAGA+GGG | + | chr4_1:81165725-81165744 | None:intergenic | 30.0% | |
| CTTCCTCTTTATAACAGAAT+TGG | - | chr4_1:81165731-81165750 | Msa0576990:intron | 30.0% | |
| TGACCAATTCTGTTATAAAG+AGG | + | chr4_1:81165737-81165756 | None:intergenic | 30.0% | |
| TAGTGAACAATGTTATGAGA+AGG | + | chr4_1:81165792-81165811 | None:intergenic | 30.0% | |
| CAGTTAGAAACATAACTGTT+AGG | + | chr4_1:81165878-81165897 | None:intergenic | 30.0% | |
| ! | ACAGTTATGTTTCTAACTGT+AGG | - | chr4_1:81165879-81165898 | Msa0576990:intron | 30.0% |
| TCTAACTGTAGGATGATTAA+AGG | - | chr4_1:81165890-81165909 | Msa0576990:intron | 30.0% | |
| !! | CTTGGTCAAGTTTTATATTG+GGG | + | chr4_1:81166099-81166118 | None:intergenic | 30.0% |
| AATATTTGAAAGGAAACCTG+TGG | - | chr4_1:81166123-81166142 | Msa0576990:intron | 30.0% | |
| ! | AAAATCCAGTTTAAAACCAC+AGG | + | chr4_1:81166142-81166161 | None:intergenic | 30.0% |
| ! | GAAATACAGTTTGTTCAAGA+TGG | - | chr4_1:81166215-81166234 | Msa0576990:CDS | 30.0% |
| ATCAACAATGGCATAAAAAC+CGG | + | chr4_1:81166276-81166295 | None:intergenic | 30.0% | |
| AGGATTGAAAATACACTTTC+AGG | - | chr4_1:81166336-81166355 | Msa0576990:intron | 30.0% | |
| ATTGAAAATACACTTTCAGG+TGG | - | chr4_1:81166339-81166358 | Msa0576990:intron | 30.0% | |
| ! | TAGAAAAGTGTGGAGAAATT+TGG | - | chr4_1:81166660-81166679 | Msa0576990:intron | 30.0% |
| CATTAACTAAAGATCAGACA+GGG | - | chr4_1:81166853-81166872 | Msa0576990:intron | 30.0% | |
| !! | TGAAACAAACACTAGCTTTA+AGG | + | chr4_1:81166882-81166901 | None:intergenic | 30.0% |
| ! | TGTTTCACTTGAATTTTCTG+TGG | - | chr4_1:81166895-81166914 | Msa0576990:intron | 30.0% |
| ! | AAATTTAGAGCAGTTTGTGT+TGG | - | chr4_1:81167921-81167940 | Msa0576990:intron | 30.0% |
| TTGTTTGGTTATGTGCAATA+TGG | - | chr4_1:81168172-81168191 | Msa0576990:five_prime_UTR | 30.0% | |
| AATATCACACATTAAATCGC+GGG | + | chr4_1:81168227-81168246 | None:intergenic | 30.0% | |
| GCGATTTAATGTGTGATATT+AGG | - | chr4_1:81168227-81168246 | Msa0576990:five_prime_UTR | 30.0% | |
| TATGAACTATTGTAACTGCC+AGG | - | chr4_1:81161806-81161825 | Msa0576990:three_prime_UTR | 35.0% | |
| !!! | GGTTTTTCGACTTTTTCACT+TGG | + | chr4_1:81161835-81161854 | None:intergenic | 35.0% |
| CCAAAGGAATGAAGGAATTA+CGG | + | chr4_1:81161982-81162001 | None:intergenic | 35.0% | |
| CAATCAATCCAAAGGAATGA+AGG | + | chr4_1:81161990-81162009 | None:intergenic | 35.0% | |
| TTCTTCTTCTTCTTCTTTGC+CGG | + | chr4_1:81162122-81162141 | None:intergenic | 35.0% | |
| ATCTTGAGAAAATGCAACTC+CGG | - | chr4_1:81162161-81162180 | Msa0576990:CDS | 35.0% | |
| GAGATCTGAAAAGAGAGTTA+TGG | + | chr4_1:81162385-81162404 | None:intergenic | 35.0% | |
| !! | TGCATCGTTTTAAGTAGATG+AGG | - | chr4_1:81162753-81162772 | Msa0576990:intron | 35.0% |
| CCTAAATGATAGATCACAAG+CGG | + | chr4_1:81163388-81163407 | None:intergenic | 35.0% | |
| !!! | TTTTACTTGGCCTTAATAGG+AGG | - | chr4_1:81163481-81163500 | Msa0576990:intron | 35.0% |
| CCCTTTATGATGATATGTCA+AGG | - | chr4_1:81163624-81163643 | Msa0576990:intron | 35.0% | |
| ! | ACAAACGGTGCAATTCATTT+TGG | + | chr4_1:81163673-81163692 | None:intergenic | 35.0% |
| GTTTATATACCTCAGTACAG+AGG | + | chr4_1:81163798-81163817 | None:intergenic | 35.0% | |
| ! | GTTTTCTTCAAGAGTAGGTT+GGG | - | chr4_1:81163876-81163895 | Msa0576990:intron | 35.0% |
| ! | TTTTCTTCAAGAGTAGGTTG+GGG | - | chr4_1:81163877-81163896 | Msa0576990:intron | 35.0% |
| TATAATATGACTAGGGCAAG+AGG | - | chr4_1:81163975-81163994 | Msa0576990:intron | 35.0% | |
| AAGAAACTATCAAGGCTTAG+AGG | + | chr4_1:81164166-81164185 | None:intergenic | 35.0% | |
| ! | TCAATCATCTTTTCTACCGT+AGG | - | chr4_1:81164290-81164309 | Msa0576990:intron | 35.0% |
| ! | CAATCATCTTTTCTACCGTA+GGG | - | chr4_1:81164291-81164310 | Msa0576990:intron | 35.0% |
| ! | AATCATCTTTTCTACCGTAG+GGG | - | chr4_1:81164292-81164311 | Msa0576990:intron | 35.0% |
| !! | TAGAATTTTGATAGCCCCTA+CGG | + | chr4_1:81164309-81164328 | None:intergenic | 35.0% |
| GTACTAGATGAGTTAGACTT+GGG | + | chr4_1:81164349-81164368 | None:intergenic | 35.0% | |
| AGAATGTTGCTCTTGATGTA+TGG | + | chr4_1:81164374-81164393 | None:intergenic | 35.0% | |
| GGTGAAGTTGTATGAAATGT+TGG | + | chr4_1:81164442-81164461 | None:intergenic | 35.0% | |
| CTTCAGTATAAACCTCTAGT+CGG | - | chr4_1:81164629-81164648 | Msa0576990:intron | 35.0% | |
| TTGTGGCAAAGATTAACACT+GGG | + | chr4_1:81164739-81164758 | None:intergenic | 35.0% | |
| ATTGTGGCAAAGATTAACAC+TGG | + | chr4_1:81164740-81164759 | None:intergenic | 35.0% | |
| TGCCATATGATTGAGTGTAT+CGG | - | chr4_1:81164785-81164804 | Msa0576990:intron | 35.0% | |
| AGTAAATAAACGCCCTTGAA+AGG | + | chr4_1:81164879-81164898 | None:intergenic | 35.0% | |
| !!! | TCAGACAGTTGAAGGTTTTT+TGG | - | chr4_1:81164921-81164940 | Msa0576990:intron | 35.0% |
| !!! | CAGACAGTTGAAGGTTTTTT+GGG | - | chr4_1:81164922-81164941 | Msa0576990:intron | 35.0% |
| !!! | AGACAGTTGAAGGTTTTTTG+GGG | - | chr4_1:81164923-81164942 | Msa0576990:intron | 35.0% |
| !! | GGCAACACTGACTTATAAAA+AGG | + | chr4_1:81164961-81164980 | None:intergenic | 35.0% |
| AACAACAGAGACTCAAATTG+CGG | + | chr4_1:81165136-81165155 | None:intergenic | 35.0% | |
| ACCATATAAACACACCATTG+CGG | + | chr4_1:81165368-81165387 | None:intergenic | 35.0% | |
| TCAGATAGAACCTTAGAGAT+GGG | + | chr4_1:81165679-81165698 | None:intergenic | 35.0% | |
| TTCAGATAGAACCTTAGAGA+TGG | + | chr4_1:81165680-81165699 | None:intergenic | 35.0% | |
| GTTATAAAGAGGAAGTGAAG+AGG | + | chr4_1:81165726-81165745 | None:intergenic | 35.0% | |
| TGTTCACTACATAATGGTCT+TGG | - | chr4_1:81165803-81165822 | Msa0576990:intron | 35.0% | |
| GTTCACTACATAATGGTCTT+GGG | - | chr4_1:81165804-81165823 | Msa0576990:intron | 35.0% | |
| ! | AGAGGTACAATTAGAAATGG+TGG | + | chr4_1:81165976-81165995 | None:intergenic | 35.0% |
| ! | CCTCTTTTATAGTGCTCTAA+CGG | - | chr4_1:81165991-81166010 | Msa0576990:intron | 35.0% |
| CGTTCCAAACATTCCTAATT+AGG | + | chr4_1:81166024-81166043 | None:intergenic | 35.0% | |
| !! | AAACTGGATTTTGAGAAAGC+TGG | - | chr4_1:81166150-81166169 | Msa0576990:intron | 35.0% |
| ! | GCAATTGGTAAACAAGGTTT+TGG | - | chr4_1:81166189-81166208 | Msa0576990:CDS | 35.0% |
| ! | AGTTTGTTCAAGATGGAGAA+TGG | - | chr4_1:81166222-81166241 | Msa0576990:CDS | 35.0% |
| TCATGATCAAATGAGGACAT+AGG | - | chr4_1:81166316-81166335 | Msa0576990:intron | 35.0% | |
| ! | TTGTTTCACTTATAGCTCTG+AGG | + | chr4_1:81166540-81166559 | None:intergenic | 35.0% |
| !!! | ACAATTTTTTGGACCTCGTT+TGG | - | chr4_1:81166556-81166575 | Msa0576990:intron | 35.0% |
| !!! | CAATTTTTTGGACCTCGTTT+GGG | - | chr4_1:81166557-81166576 | Msa0576990:intron | 35.0% |
| !!! | AATTTTTTGGACCTCGTTTG+GGG | - | chr4_1:81166558-81166577 | Msa0576990:intron | 35.0% |
| ! | AAAAGTGTGGAGAAATTTGG+AGG | - | chr4_1:81166663-81166682 | Msa0576990:intron | 35.0% |
| AAAGTGTGGAGAAATTTGGA+GGG | - | chr4_1:81166664-81166683 | Msa0576990:intron | 35.0% | |
| AATTTGGAGGGAATGATGAA+AGG | - | chr4_1:81166676-81166695 | Msa0576990:intron | 35.0% | |
| ATTTGGAGGGAATGATGAAA+GGG | - | chr4_1:81166677-81166696 | Msa0576990:intron | 35.0% | |
| ! | GATTCACTATCCTTTAAGGA+GGG | + | chr4_1:81166744-81166763 | None:intergenic | 35.0% |
| TGCAGAAAATCTACAAACAG+GGG | + | chr4_1:81166771-81166790 | None:intergenic | 35.0% | |
| GTGCAGAAAATCTACAAACA+GGG | + | chr4_1:81166772-81166791 | None:intergenic | 35.0% | |
| AGTGCAGAAAATCTACAAAC+AGG | + | chr4_1:81166773-81166792 | None:intergenic | 35.0% | |
| CCTGTCTGATCTTTAGTTAA+TGG | + | chr4_1:81166855-81166874 | None:intergenic | 35.0% | |
| CCATTAACTAAAGATCAGAC+AGG | - | chr4_1:81166852-81166871 | Msa0576990:intron | 35.0% | |
| !!! | TTTCAGGTTTTTCTCTGCTT+TGG | - | chr4_1:81166956-81166975 | Msa0576990:intron | 35.0% |
| TGAAATAAAGAGATGGGAGT+GGG | + | chr4_1:81167078-81167097 | None:intergenic | 35.0% | |
| ATGAAATAAAGAGATGGGAG+TGG | + | chr4_1:81167079-81167098 | None:intergenic | 35.0% | |
| ATATGCATGCAACTTGGTTA+AGG | + | chr4_1:81167201-81167220 | None:intergenic | 35.0% | |
| GTATGAATATGCATGCAACT+TGG | + | chr4_1:81167207-81167226 | None:intergenic | 35.0% | |
| ATATGCATGCAACTTGGTTA+AGG | + | chr4_1:81167201-81167220 | None:intergenic | 35.0% | |
| TAGAGAATATGCATGCAACT+TGG | + | chr4_1:81167329-81167348 | None:intergenic | 35.0% | |
| TCTATTGTTGCCATGATTGT+GGG | - | chr4_1:81167345-81167364 | Msa0576990:intron | 35.0% | |
| ATTGTGCACGTTATAGTGAA+CGG | - | chr4_1:81167464-81167483 | Msa0576990:intron | 35.0% | |
| !!! | TGTTACTTTTTACCGGCAAT+TGG | - | chr4_1:81167547-81167566 | Msa0576990:intron | 35.0% |
| CATATTGATGAACCAATTGC+CGG | + | chr4_1:81167562-81167581 | None:intergenic | 35.0% | |
| ATCACCTAGAATAACCAGAA+GGG | + | chr4_1:81167897-81167916 | None:intergenic | 35.0% | |
| TATCACCTAGAATAACCAGA+AGG | + | chr4_1:81167898-81167917 | None:intergenic | 35.0% | |
| ! | AGACACCTATTGATTGTTTC+AGG | - | chr4_1:81167947-81167966 | Msa0576990:intron | 35.0% |
| AGTCAGAAATCCAAACTTAG+GGG | + | chr4_1:81168078-81168097 | None:intergenic | 35.0% | |
| CAGTCAGAAATCCAAACTTA+GGG | + | chr4_1:81168079-81168098 | None:intergenic | 35.0% | |
| TCAGTCAGAAATCCAAACTT+AGG | + | chr4_1:81168080-81168099 | None:intergenic | 35.0% | |
| ACATATTTCTTGGCCAAACT+TGG | + | chr4_1:81168263-81168282 | None:intergenic | 35.0% | |
| TAATCCCAACGTTTACCAAG+TGG | + | chr4_1:81161714-81161733 | None:intergenic | 40.0% | |
| TAGTTCATACCATAGCTGAC+AGG | + | chr4_1:81161795-81161814 | None:intergenic | 40.0% | |
| CCGTAATTCCTTCATTCCTT+TGG | - | chr4_1:81161979-81161998 | Msa0576990:three_prime_UTR | 40.0% | |
| TCTCTCAGATCTATCCATCT+AGG | - | chr4_1:81162081-81162100 | Msa0576990:CDS | 40.0% | |
| CTCTCAGATCTATCCATCTA+GGG | - | chr4_1:81162082-81162101 | Msa0576990:CDS | 40.0% | |
| ATAGATTCCGGTAATTCTGC+CGG | + | chr4_1:81162183-81162202 | None:intergenic | 40.0% | |
| TGATCTCATGAGAACTATCC+AGG | - | chr4_1:81162210-81162229 | Msa0576990:CDS | 40.0% | |
| ! | AAGAGTGATGAAAGTGTGGT+TGG | + | chr4_1:81162257-81162276 | None:intergenic | 40.0% |
| CATCTAAAGATTGCTCGATG+TGG | + | chr4_1:81162954-81162973 | None:intergenic | 40.0% | |
| CACATCGAGCAATCTTTAGA+TGG | - | chr4_1:81162952-81162971 | Msa0576990:CDS | 40.0% | |
| !! | GCGTCTGTTTGGTGTATATT+TGG | - | chr4_1:81163277-81163296 | Msa0576990:intron | 40.0% |
| CCGCTTGTGATCTATCATTT+AGG | - | chr4_1:81163385-81163404 | Msa0576990:intron | 40.0% | |
| ! | GCAATCAACTGAAAGTGCAT+TGG | + | chr4_1:81163459-81163478 | None:intergenic | 40.0% |
| CGAAGCAAGTATGATACACA+TGG | + | chr4_1:81163596-81163615 | None:intergenic | 40.0% | |
| TCAGTACAGAGGCAAAATTC+AGG | + | chr4_1:81163787-81163806 | None:intergenic | 40.0% | |
| ! | TGAATTTTGCCTCTGTACTG+AGG | - | chr4_1:81163786-81163805 | Msa0576990:intron | 40.0% |
| ATATCTGCAAATGCTGCCAT+GGG | - | chr4_1:81163854-81163873 | Msa0576990:intron | 40.0% | |
| CTACTCTTGAAGAAAACCCA+TGG | + | chr4_1:81163873-81163892 | None:intergenic | 40.0% | |
| ! | CATGGGTTTTCTTCAAGAGT+AGG | - | chr4_1:81163871-81163890 | Msa0576990:intron | 40.0% |
| ! | GGTTTTCTTCAAGAGTAGGT+TGG | - | chr4_1:81163875-81163894 | Msa0576990:intron | 40.0% |
| AGTATAGATCAGATGAGGGT+AGG | + | chr4_1:81164210-81164229 | None:intergenic | 40.0% | |
| !! | GACGTTTTGAGCATGTATTG+AGG | + | chr4_1:81164259-81164278 | None:intergenic | 40.0% |
| CGTACTAGATGAGTTAGACT+TGG | + | chr4_1:81164350-81164369 | None:intergenic | 40.0% | |
| TGGATGGCAAAATGTCAACA+CGG | + | chr4_1:81164422-81164441 | None:intergenic | 40.0% | |
| ! | CATTTTCCTATTAGCTAGGG+TGG | - | chr4_1:81164482-81164501 | Msa0576990:intron | 40.0% |
| TGTACACCATAGGATTCAAG+CGG | + | chr4_1:81164574-81164593 | None:intergenic | 40.0% | |
| ! | CAGGTATTGTGAGTGATAGA+GGG | + | chr4_1:81164600-81164619 | None:intergenic | 40.0% |
| TAAGAGTGATCTTCATGTCG+TGG | - | chr4_1:81164670-81164689 | Msa0576990:intron | 40.0% | |
| GACCGATACACTCAATCATA+TGG | + | chr4_1:81164790-81164809 | None:intergenic | 40.0% | |
| ! | AGATGAGAGGTGGATTTGTA+CGG | + | chr4_1:81164839-81164858 | None:intergenic | 40.0% |
| CTTTCCTCGTTTCCTTTCAA+GGG | - | chr4_1:81164864-81164883 | Msa0576990:intron | 40.0% | |
| ! | CTCATTTATAGCCTTACCTC+TGG | - | chr4_1:81164897-81164916 | Msa0576990:intron | 40.0% |
| ATAAGTCAGTGTTGCCTAAC+TGG | - | chr4_1:81164965-81164984 | Msa0576990:intron | 40.0% | |
| GGTGAAAAATAAGGCCAGTT+AGG | + | chr4_1:81164982-81165001 | None:intergenic | 40.0% | |
| TATTGAAGAGAAAAGGGGGA+GGG | + | chr4_1:81165003-81165022 | None:intergenic | 40.0% | |
| ATATTGAAGAGAAAAGGGGG+AGG | + | chr4_1:81165004-81165023 | None:intergenic | 40.0% | |
| ACAACAGAGACTCAAATTGC+GGG | + | chr4_1:81165135-81165154 | None:intergenic | 40.0% | |
| ACAATGTTGTGGAGACAAAG+CGG | + | chr4_1:81165173-81165192 | None:intergenic | 40.0% | |
| CATACACTGGTACAATGTTG+TGG | + | chr4_1:81165184-81165203 | None:intergenic | 40.0% | |
| CACAACATTGTACCAGTGTA+TGG | - | chr4_1:81165182-81165201 | Msa0576990:intron | 40.0% | |
| CATCAACAAGAACCATACAC+TGG | + | chr4_1:81165197-81165216 | None:intergenic | 40.0% | |
| !!! | AGATTTTTAGCAACCGCCAT+AGG | - | chr4_1:81165298-81165317 | Msa0576990:intron | 40.0% |
| ATCCCTTTGCAAATAGCCTA+TGG | + | chr4_1:81165317-81165336 | None:intergenic | 40.0% | |
| ! | CTGCAAAGAACTTTTGCCTT+TGG | - | chr4_1:81165454-81165473 | Msa0576990:intron | 40.0% |
| GAGAGTAATACCAGAGATAG+AGG | + | chr4_1:81165543-81165562 | None:intergenic | 40.0% | |
| TTACTCTCTCCCTTCAAAAC+CGG | - | chr4_1:81165555-81165574 | Msa0576990:intron | 40.0% | |
| AAACATAACTGTTAGGCGAC+TGG | + | chr4_1:81165871-81165890 | None:intergenic | 40.0% | |
| ! | CCGTTAGAGCACTATAAAAG+AGG | + | chr4_1:81165994-81166013 | None:intergenic | 40.0% |
| TATAGTGCTCTAACGGTAAG+TGG | - | chr4_1:81165998-81166017 | Msa0576990:intron | 40.0% | |
| TAACGGTAAGTGGCCTAATT+AGG | - | chr4_1:81166008-81166027 | Msa0576990:intron | 40.0% | |
| GTGGCCTAATTAGGAATGTT+TGG | - | chr4_1:81166017-81166036 | Msa0576990:intron | 40.0% | |
| ! | TTAGGAATGTTTGGAACGCT+AGG | - | chr4_1:81166026-81166045 | Msa0576990:intron | 40.0% |
| ! | TAGGAATGTTTGGAACGCTA+GGG | - | chr4_1:81166027-81166046 | Msa0576990:intron | 40.0% |
| !!! | GGAAACCTGTGGTTTTAAAC+TGG | - | chr4_1:81166134-81166153 | Msa0576990:intron | 40.0% |
| GGATCATTTCTGTTGGCAAT+TGG | - | chr4_1:81166174-81166193 | Msa0576990:intron | 40.0% | |
| CTGTTGGCAATTGGTAAACA+AGG | - | chr4_1:81166183-81166202 | Msa0576990:intron | 40.0% | |
| ! | ACCATGGAGTTTCTTTTCAC+CGG | - | chr4_1:81166254-81166273 | Msa0576990:intron | 40.0% |
| ! | GAAAATACACTTTCAGGTGG+TGG | - | chr4_1:81166342-81166361 | Msa0576990:intron | 40.0% |
| ! | TCGTTTGGGGTTTGTTTGTA+GGG | - | chr4_1:81166571-81166590 | Msa0576990:intron | 40.0% |
| GATTAGGATTCCCTAACTGT+GGG | - | chr4_1:81166593-81166612 | Msa0576990:intron | 40.0% | |
| GATGAAAGAGAGAGAGAGAA+AGG | - | chr4_1:81166707-81166726 | Msa0576990:intron | 40.0% | |
| AAAGAGAGAGAGAGAAAGGT+AGG | - | chr4_1:81166711-81166730 | Msa0576990:intron | 40.0% | |
| ! | ACTATCCTTTAAGGAGGGAA+TGG | + | chr4_1:81166739-81166758 | None:intergenic | 40.0% |
| ! | GGATTCACTATCCTTTAAGG+AGG | + | chr4_1:81166745-81166764 | None:intergenic | 40.0% |
| CTGGGATTCACTATCCTTTA+AGG | + | chr4_1:81166748-81166767 | None:intergenic | 40.0% | |
| AAAATCTACAAACAGGGGCT+GGG | + | chr4_1:81166766-81166785 | None:intergenic | 40.0% | |
| !! | TCTCTGCTTTGGAAATTCAG+TGG | - | chr4_1:81166967-81166986 | Msa0576990:intron | 40.0% |
| CTCTATTGTTGCCATGATTG+TGG | - | chr4_1:81167344-81167363 | Msa0576990:intron | 40.0% | |
| TGTGGGAAGTGAGGAAATTT+CGG | - | chr4_1:81167362-81167381 | Msa0576990:intron | 40.0% | |
| AGTCTTACGAGCAGTAAACA+AGG | + | chr4_1:81167419-81167438 | None:intergenic | 40.0% | |
| TTATTTGCAGACTCAGCACA+AGG | - | chr4_1:81167615-81167634 | Msa0576990:intron | 40.0% | |
| TCACCTAGAATAACCAGAAG+GGG | + | chr4_1:81167896-81167915 | None:intergenic | 40.0% | |
| CGGTTCCTGAAACAATCAAT+AGG | + | chr4_1:81167955-81167974 | None:intergenic | 40.0% | |
| ATCAAGCAGTCATATGTGTG+TGG | - | chr4_1:81168008-81168027 | Msa0576990:intron | 40.0% | |
| ! | TGCATTTTTCCCCCTAAGTT+TGG | - | chr4_1:81168065-81168084 | Msa0576990:five_prime_UTR | 40.0% |
| GTCAGAAATCCAAACTTAGG+GGG | + | chr4_1:81168077-81168096 | None:intergenic | 40.0% | |
| ! | GGGTTTTGCAATACTTGGAA+CGG | + | chr4_1:81168207-81168226 | None:intergenic | 40.0% |
| TATTTCTTGGCCAAACTTGG+CGG | + | chr4_1:81168260-81168279 | None:intergenic | 40.0% | |
| CTTACAAACGACGCATCGTA+GGG | + | chr4_1:81161765-81161784 | None:intergenic | 45.0% | |
| TCTTACAAACGACGCATCGT+AGG | + | chr4_1:81161766-81161785 | None:intergenic | 45.0% | |
| !!! | GACTTTTTCACTTGGCTTCC+TGG | + | chr4_1:81161827-81161846 | None:intergenic | 45.0% |
| GGAGAAGTAGTAACCCTAGA+TGG | + | chr4_1:81162098-81162117 | None:intergenic | 45.0% | |
| TAGGGTTACTACTTCTCCTC+CGG | - | chr4_1:81162100-81162119 | Msa0576990:CDS | 45.0% | |
| TTCTTCTTCTTCTTTGCCGG+AGG | + | chr4_1:81162119-81162138 | None:intergenic | 45.0% | |
| GGCAGAATTACCGGAATCTA+TGG | - | chr4_1:81162182-81162201 | Msa0576990:CDS | 45.0% | |
| GATCAGTGTGCCATAGATTC+CGG | + | chr4_1:81162195-81162214 | None:intergenic | 45.0% | |
| !! | GTGTGGTTGGTTTGCTTACA+TGG | + | chr4_1:81162244-81162263 | None:intergenic | 45.0% |
| ! | CAGATTGCTGCTTATCCTTG+TGG | - | chr4_1:81162348-81162367 | Msa0576990:CDS | 45.0% |
| ! | ATTGCTGCTTATCCTTGTGG+TGG | - | chr4_1:81162351-81162370 | Msa0576990:CDS | 45.0% |
| ATGGATGACATACCACCACA+AGG | + | chr4_1:81162366-81162385 | None:intergenic | 45.0% | |
| ACACCTTTGATCAGAGGAGT+TGG | + | chr4_1:81162621-81162640 | None:intergenic | 45.0% | |
| ! | ACTCCTCTGATCAAAGGTGT+CGG | - | chr4_1:81162621-81162640 | Msa0576990:CDS | 45.0% |
| TGAGAAGGCTGATAAGCTCA+AGG | + | chr4_1:81163177-81163196 | None:intergenic | 45.0% | |
| TGACTAACGCATGACTGAGA+AGG | + | chr4_1:81163192-81163211 | None:intergenic | 45.0% | |
| TTCTCAGTCATGCGTTAGTC+AGG | - | chr4_1:81163191-81163210 | Msa0576990:intron | 45.0% | |
| TCTCAGTCATGCGTTAGTCA+GGG | - | chr4_1:81163192-81163211 | Msa0576990:intron | 45.0% | |
| GATAGTACACTGCGTCTGTT+TGG | - | chr4_1:81163266-81163285 | Msa0576990:intron | 45.0% | |
| CGGAGACAGGTTATACAAGT+TGG | + | chr4_1:81163368-81163387 | None:intergenic | 45.0% | |
| GATATCTGCAAATGCTGCCA+TGG | - | chr4_1:81163853-81163872 | Msa0576990:intron | 45.0% | |
| AAGGCTTAGAGGTCAGTGTT+TGG | + | chr4_1:81164155-81164174 | None:intergenic | 45.0% | |
| GGATGGCAAAATGTCAACAC+GGG | + | chr4_1:81164421-81164440 | None:intergenic | 45.0% | |
| GTCATCGTAGACTGTAAGAC+CGG | + | chr4_1:81164463-81164482 | None:intergenic | 45.0% | |
| TACACCATAGGATTCAAGCG+GGG | + | chr4_1:81164572-81164591 | None:intergenic | 45.0% | |
| GTACACCATAGGATTCAAGC+GGG | + | chr4_1:81164573-81164592 | None:intergenic | 45.0% | |
| TAGAGGGAGATGTACACCAT+AGG | + | chr4_1:81164584-81164603 | None:intergenic | 45.0% | |
| ! | GCAGGTATTGTGAGTGATAG+AGG | + | chr4_1:81164601-81164620 | None:intergenic | 45.0% |
| ! | ATCTTCATGTCGTGGCTTTG+AGG | - | chr4_1:81164678-81164697 | Msa0576990:intron | 45.0% |
| TTAACACTGGGAGTTCACGA+GGG | + | chr4_1:81164727-81164746 | None:intergenic | 45.0% | |
| ATTAACACTGGGAGTTCACG+AGG | + | chr4_1:81164728-81164747 | None:intergenic | 45.0% | |
| GAAAGGAGATAGATGAGAGG+TGG | + | chr4_1:81164849-81164868 | None:intergenic | 45.0% | |
| GAGGAAAGGAGATAGATGAG+AGG | + | chr4_1:81164852-81164871 | None:intergenic | 45.0% | |
| CCTTGAAAGGAAACGAGGAA+AGG | + | chr4_1:81164866-81164885 | None:intergenic | 45.0% | |
| CCTTTCCTCGTTTCCTTTCA+AGG | - | chr4_1:81164863-81164882 | Msa0576990:intron | 45.0% | |
| AACTGTCTGAACCAGAGGTA+AGG | + | chr4_1:81164911-81164930 | None:intergenic | 45.0% | |
| AAGGGGGAGGGTGAAAAATA+AGG | + | chr4_1:81164991-81165010 | None:intergenic | 45.0% | |
| ! | TTCTGTGATTGGTGACCCAA+TGG | - | chr4_1:81165045-81165064 | Msa0576990:intron | 45.0% |
| ! | TCTGTGATTGGTGACCCAAT+GGG | - | chr4_1:81165046-81165065 | Msa0576990:intron | 45.0% |
| GACCAATTGCTAGTCCCATT+GGG | + | chr4_1:81165063-81165082 | None:intergenic | 45.0% | |
| AGACCAATTGCTAGTCCCAT+TGG | + | chr4_1:81165064-81165083 | None:intergenic | 45.0% | |
| ! | ACTAGCAATTGGTCTGTTCC+TGG | - | chr4_1:81165069-81165088 | Msa0576990:intron | 45.0% |
| CACCAGCATCAGAATGTGAT+GGG | - | chr4_1:81165094-81165113 | Msa0576990:intron | 45.0% | |
| ATCCCATCACATTCTGATGC+TGG | + | chr4_1:81165099-81165118 | None:intergenic | 45.0% | |
| ! | ATCAGAATGTGATGGGATCG+CGG | - | chr4_1:81165101-81165120 | Msa0576990:intron | 45.0% |
| TGTGGAGACAAAGCGGAAAT+TGG | + | chr4_1:81165166-81165185 | None:intergenic | 45.0% | |
| CCTTTGCAAATAGCCTATGG+CGG | + | chr4_1:81165314-81165333 | None:intergenic | 45.0% | |
| CGCCATAGGCTATTTGCAAA+GGG | - | chr4_1:81165312-81165331 | Msa0576990:intron | 45.0% | |
| ATGGTACCACAACTCAATGG+CGG | + | chr4_1:81165342-81165361 | None:intergenic | 45.0% | |
| CCTATGGTACCACAACTCAA+TGG | + | chr4_1:81165345-81165364 | None:intergenic | 45.0% | |
| ! | CCATTGAGTTGTGGTACCAT+AGG | - | chr4_1:81165342-81165361 | Msa0576990:intron | 45.0% |
| GCCGCAATGGTGTGTTTATA+TGG | - | chr4_1:81165364-81165383 | Msa0576990:intron | 45.0% | |
| ACCAGAGATAGAGGACATGT+GGG | + | chr4_1:81165534-81165553 | None:intergenic | 45.0% | |
| TACCAGAGATAGAGGACATG+TGG | + | chr4_1:81165535-81165554 | None:intergenic | 45.0% | |
| TGTCAATTCATCCAACCAGC+CGG | + | chr4_1:81165577-81165596 | None:intergenic | 45.0% | |
| GATAGAACCTTAGAGATGGG+AGG | + | chr4_1:81165676-81165695 | None:intergenic | 45.0% | |
| AAAGAGGAAGTGAAGAGGGA+GGG | + | chr4_1:81165721-81165740 | None:intergenic | 45.0% | |
| TAAAGAGGAAGTGAAGAGGG+AGG | + | chr4_1:81165722-81165741 | None:intergenic | 45.0% | |
| TGAGAAGGTGACATAGCAGA+GGG | + | chr4_1:81165777-81165796 | None:intergenic | 45.0% | |
| ATGAGAAGGTGACATAGCAG+AGG | + | chr4_1:81165778-81165797 | None:intergenic | 45.0% | |
| !! | CTGGATTTTGAGAAAGCTGG+AGG | - | chr4_1:81166153-81166172 | Msa0576990:intron | 45.0% |
| AGCTGGAGGATCATTTCTGT+TGG | - | chr4_1:81166167-81166186 | Msa0576990:intron | 45.0% | |
| AGAATGGAGAATCTGCACCA+TGG | - | chr4_1:81166238-81166257 | Msa0576990:CDS | 45.0% | |
| ACCGGTGAAAAGAAACTCCA+TGG | + | chr4_1:81166258-81166277 | None:intergenic | 45.0% | |
| CTACAAACAAACCCCAAACG+AGG | + | chr4_1:81166572-81166591 | None:intergenic | 45.0% | |
| ! | CTCGTTTGGGGTTTGTTTGT+AGG | - | chr4_1:81166570-81166589 | Msa0576990:intron | 45.0% |
| ! | GGGGTTTGTTTGTAGGGATT+AGG | - | chr4_1:81166577-81166596 | Msa0576990:intron | 45.0% |
| GGATTAGGATTCCCTAACTG+TGG | - | chr4_1:81166592-81166611 | Msa0576990:intron | 45.0% | |
| AACGTAGAGACCCACAGTTA+GGG | + | chr4_1:81166606-81166625 | None:intergenic | 45.0% | |
| AAACGTAGAGACCCACAGTT+AGG | + | chr4_1:81166607-81166626 | None:intergenic | 45.0% | |
| TAACTGTGGGTCTCTACGTT+TGG | - | chr4_1:81166606-81166625 | Msa0576990:intron | 45.0% | |
| AACTGTGGGTCTCTACGTTT+GGG | - | chr4_1:81166607-81166626 | Msa0576990:intron | 45.0% | |
| ! | TCTACGTTTGGGGTGACTTT+AGG | - | chr4_1:81166618-81166637 | Msa0576990:intron | 45.0% |
| AGGTACCATTCCCTCCTTAA+AGG | - | chr4_1:81166731-81166750 | Msa0576990:intron | 45.0% | |
| GAAAATCTACAAACAGGGGC+TGG | + | chr4_1:81166767-81166786 | None:intergenic | 45.0% | |
| TTGCAACAGAAAGCGAGTTG+AGG | + | chr4_1:81166993-81167012 | None:intergenic | 45.0% | |
| TAAAGAGATGGGAGTGGGAA+GGG | + | chr4_1:81167073-81167092 | None:intergenic | 45.0% | |
| ATAAAGAGATGGGAGTGGGA+AGG | + | chr4_1:81167074-81167093 | None:intergenic | 45.0% | |
| TTCCTCACTTCCCACAATCA+TGG | + | chr4_1:81167358-81167377 | None:intergenic | 45.0% | |
| GACTCAGCACAAGGTTGAAA+TGG | - | chr4_1:81167624-81167643 | Msa0576990:CDS | 45.0% | |
| GTTGAAATGGACAAGCGTGA+CGG | - | chr4_1:81167637-81167656 | Msa0576990:intron | 45.0% | |
| TTGAAATGGACAAGCGTGAC+GGG | - | chr4_1:81167638-81167657 | Msa0576990:intron | 45.0% | |
| AGGAACTGGTTGATCAATGC+GGG | + | chr4_1:81167713-81167732 | None:intergenic | 45.0% | |
| GAGGAACTGGTTGATCAATG+CGG | + | chr4_1:81167714-81167733 | None:intergenic | 45.0% | |
| AACCAGTTCCTCCTTCTGTT+GGG | - | chr4_1:81167722-81167741 | Msa0576990:intron | 45.0% | |
| TATGCACCACAACCAGCATA+TGG | - | chr4_1:81167745-81167764 | Msa0576990:intron | 45.0% | |
| ATGCACCACAACCAGCATAT+GGG | - | chr4_1:81167746-81167765 | Msa0576990:intron | 45.0% | |
| CCATAATTCTGCCCATATGC+TGG | + | chr4_1:81167760-81167779 | None:intergenic | 45.0% | |
| CCAGCATATGGGCAGAATTA+TGG | - | chr4_1:81167757-81167776 | Msa0576990:CDS | 45.0% | |
| ! | ATCCCCCTTCTGGTTATTCT+AGG | - | chr4_1:81167890-81167909 | Msa0576990:intron | 45.0% |
| CACCTAGAATAACCAGAAGG+GGG | + | chr4_1:81167895-81167914 | None:intergenic | 45.0% | |
| ! | ATCGCGGGTTTTGCAATACT+TGG | + | chr4_1:81168212-81168231 | None:intergenic | 45.0% |
| !!! | ATAAATAAAAAAAAGTATTT+TGG | + | chr4_1:81167252-81167271 | None:intergenic | 5.0% |
| AGAGTGAGTCCTGTCAGCTA+TGG | - | chr4_1:81161783-81161802 | Msa0576990:three_prime_UTR | 50.0% | |
| ! | GAAAGAGAGAGAAAGCGCGT+GGG | + | chr4_1:81161937-81161956 | None:intergenic | 50.0% |
| ! | AGAAAGAGAGAGAAAGCGCG+TGG | + | chr4_1:81161938-81161957 | None:intergenic | 50.0% |
| ! | CGGTGTTGAGTAGAAGACAC+TGG | + | chr4_1:81161962-81161981 | None:intergenic | 50.0% |
| TGCAACTCCGGCAGAATTAC+CGG | - | chr4_1:81162173-81162192 | Msa0576990:CDS | 50.0% | |
| !! | GCTTACATGGAGTATCGACC+TGG | + | chr4_1:81162231-81162250 | None:intergenic | 50.0% |
| GCACCAACTCCTCTGATCAA+AGG | - | chr4_1:81162615-81162634 | Msa0576990:CDS | 50.0% | |
| ACACCGACACCTTTGATCAG+AGG | + | chr4_1:81162627-81162646 | None:intergenic | 50.0% | |
| TGATCGTAATGTGCTTCCCG+TGG | - | chr4_1:81163149-81163168 | Msa0576990:intron | 50.0% | |
| ! | TGATAAGCTCAAGGTGCCAC+GGG | + | chr4_1:81163168-81163187 | None:intergenic | 50.0% |
| ! | CTGATAAGCTCAAGGTGCCA+CGG | + | chr4_1:81163169-81163188 | None:intergenic | 50.0% |
| GATAGATCACAAGCGGAGAC+AGG | + | chr4_1:81163381-81163400 | None:intergenic | 50.0% | |
| TCCAGATACACATGCTGTGC+TGG | - | chr4_1:81163721-81163740 | Msa0576990:intron | 50.0% | |
| ACCAGCACAGCATGTGTATC+TGG | + | chr4_1:81163725-81163744 | None:intergenic | 50.0% | |
| ACGGTACCACCCTAGCTAAT+AGG | + | chr4_1:81164491-81164510 | None:intergenic | 50.0% | |
| AAGCGGGGTGGATGATATTG+AGG | + | chr4_1:81164557-81164576 | None:intergenic | 50.0% | |
| AGAGGTGAAAGTCCGACTAG+AGG | + | chr4_1:81164644-81164663 | None:intergenic | 50.0% | |
| AACGCCCTTGAAAGGAAACG+AGG | + | chr4_1:81164871-81164890 | None:intergenic | 50.0% | |
| CCTTCAACTGTCTGAACCAG+AGG | + | chr4_1:81164916-81164935 | None:intergenic | 50.0% | |
| ! | CCTCTGGTTCAGACAGTTGA+AGG | - | chr4_1:81164913-81164932 | Msa0576990:intron | 50.0% |
| ! | GACCCAATGGGACTAGCAAT+TGG | - | chr4_1:81165058-81165077 | Msa0576990:intron | 50.0% |
| GCACCAGCATCAGAATGTGA+TGG | - | chr4_1:81165093-81165112 | Msa0576990:intron | 50.0% | |
| CCGCCATAGGCTATTTGCAA+AGG | - | chr4_1:81165311-81165330 | Msa0576990:intron | 50.0% | |
| AAACACACCATTGCGGCCTA+TGG | + | chr4_1:81165361-81165380 | None:intergenic | 50.0% | |
| TCAAGGGAACTGACCCTCTT+GGG | + | chr4_1:81165487-81165506 | None:intergenic | 50.0% | |
| TTCAAGGGAACTGACCCTCT+TGG | + | chr4_1:81165488-81165507 | None:intergenic | 50.0% | |
| !!! | TCCAACCAGCCGGTTTTGAA+GGG | + | chr4_1:81165567-81165586 | None:intergenic | 50.0% |
| !! | ATCCAACCAGCCGGTTTTGA+AGG | + | chr4_1:81165568-81165587 | None:intergenic | 50.0% |
| GAACCTTAGAGATGGGAGGA+GGG | + | chr4_1:81165672-81165691 | None:intergenic | 50.0% | |
| AGAACCTTAGAGATGGGAGG+AGG | + | chr4_1:81165673-81165692 | None:intergenic | 50.0% | |
| AAGAGGAAGTGAAGAGGGAG+GGG | + | chr4_1:81165720-81165739 | None:intergenic | 50.0% | |
| ATGAGAATGTGGGCCCAAAC+AGG | + | chr4_1:81165848-81165867 | None:intergenic | 50.0% | |
| AGGCGACTGGATGAGAATGT+GGG | + | chr4_1:81165858-81165877 | None:intergenic | 50.0% | |
| TAGGCGACTGGATGAGAATG+TGG | + | chr4_1:81165859-81165878 | None:intergenic | 50.0% | |
| ACTGTGGGTCTCTACGTTTG+GGG | - | chr4_1:81166608-81166627 | Msa0576990:intron | 50.0% | |
| TGCCATGATTGTGGGAAGTG+AGG | - | chr4_1:81167353-81167372 | Msa0576990:intron | 50.0% | |
| GGGAAGTGAGGAAATTTCGG+AGG | - | chr4_1:81167365-81167384 | Msa0576990:intron | 50.0% | |
| ! | ACAAGCGTGACGGGAAGTTT+GGG | - | chr4_1:81167647-81167666 | Msa0576990:intron | 50.0% |
| !! | ATGCGGGACATTTGCTGTAC+AGG | + | chr4_1:81167697-81167716 | None:intergenic | 50.0% |
| CAACCAGTTCCTCCTTCTGT+TGG | - | chr4_1:81167721-81167740 | Msa0576990:intron | 50.0% | |
| TACCCAACAGAAGGAGGAAC+TGG | + | chr4_1:81167727-81167746 | None:intergenic | 50.0% | |
| TGTGGTGCATACCCAACAGA+AGG | + | chr4_1:81167736-81167755 | None:intergenic | 50.0% | |
| ! | TTCTGCCCATATGCTGGTTG+TGG | + | chr4_1:81167754-81167773 | None:intergenic | 50.0% |
| TTGTGGAGGATAAGCAGCAG+GGG | + | chr4_1:81167833-81167852 | None:intergenic | 50.0% | |
| GTTGTGGAGGATAAGCAGCA+GGG | + | chr4_1:81167834-81167853 | None:intergenic | 50.0% | |
| TGTTGTGGAGGATAAGCAGC+AGG | + | chr4_1:81167835-81167854 | None:intergenic | 50.0% | |
| GCTGCTTATCCTCCACAACA+AGG | - | chr4_1:81167835-81167854 | Msa0576990:exon | 50.0% | |
| TTGTGGAGGATAAGCAGCAG+GGG | + | chr4_1:81167833-81167852 | None:intergenic | 50.0% | |
| CTTGTGGAGGATAAGCAGCA+GGG | + | chr4_1:81167867-81167886 | None:intergenic | 50.0% | |
| GTTACATGCCCTGCAGTGGT+AGG | - | chr4_1:81163743-81163762 | Msa0576990:intron | 55.0% | |
| TCTCCACACCTACCACTGCA+GGG | + | chr4_1:81163754-81163773 | None:intergenic | 55.0% | |
| TTCTCCACACCTACCACTGC+AGG | + | chr4_1:81163755-81163774 | None:intergenic | 55.0% | |
| TCCACCCCGCTTGAATCCTA+TGG | - | chr4_1:81164565-81164584 | Msa0576990:intron | 55.0% | |
| ACCATAGGATTCAAGCGGGG+TGG | + | chr4_1:81164569-81164588 | None:intergenic | 55.0% | |
| CATTCTGATGCTGGTGCACC+AGG | + | chr4_1:81165090-81165109 | None:intergenic | 55.0% | |
| ! | GGATGTCCGCCATTGAGTTG+TGG | - | chr4_1:81165333-81165352 | Msa0576990:intron | 55.0% |
| TGTGGTACCATAGGCCGCAA+TGG | - | chr4_1:81165351-81165370 | Msa0576990:intron | 55.0% | |
| CTTTGGCAATCCGCCCAAGA+GGG | - | chr4_1:81165471-81165490 | Msa0576990:intron | 55.0% | |
| GGGTCAGTTCCCTTGAAGTC+AGG | - | chr4_1:81165491-81165510 | Msa0576990:intron | 55.0% | |
| TCCCTTGAAGTCAGGCAGCT+CGG | - | chr4_1:81165499-81165518 | Msa0576990:intron | 55.0% | |
| AGAGGACATGTGGGCCAAGA+AGG | + | chr4_1:81165525-81165544 | None:intergenic | 55.0% | |
| GCCCACATGTCCTCTATCTC+TGG | - | chr4_1:81165530-81165549 | Msa0576990:intron | 55.0% | |
| TCTCTCCCTTCAAAACCGGC+TGG | - | chr4_1:81165559-81165578 | Msa0576990:intron | 55.0% | |
| TCCCTTCAAAACCGGCTGGT+TGG | - | chr4_1:81165563-81165582 | Msa0576990:intron | 55.0% | |
| CATCCCTCCTCCCATCTCTA+AGG | - | chr4_1:81165666-81165685 | Msa0576990:intron | 55.0% | |
| AGAGGAAGTGAAGAGGGAGG+GGG | + | chr4_1:81165719-81165738 | None:intergenic | 55.0% | |
| AGGTGACATAGCAGAGGGTG+AGG | + | chr4_1:81165772-81165791 | None:intergenic | 55.0% | |
| ! | GACAAGCGTGACGGGAAGTT+TGG | - | chr4_1:81167646-81167665 | Msa0576990:intron | 55.0% |
| !! | CGGGACATTTGCTGTACAGG+AGG | + | chr4_1:81167694-81167713 | None:intergenic | 55.0% |
| GGTGCATACCCAACAGAAGG+AGG | + | chr4_1:81167733-81167752 | None:intergenic | 55.0% | |
| ATAGCCCTGAGCTGGTGGTT+GGG | + | chr4_1:81167794-81167813 | None:intergenic | 55.0% | |
| TGTGGAGGATAAGCAGCAGG+GGG | + | chr4_1:81167832-81167851 | None:intergenic | 55.0% | |
| ! | GGGGGATATCCTTGTTGTGG+AGG | + | chr4_1:81167847-81167866 | None:intergenic | 55.0% |
| GCAGGGGGATATCCTTGTTG+TGG | + | chr4_1:81167850-81167869 | None:intergenic | 55.0% | |
| TGTGGAGGATAAGCAGCAGG+GGG | + | chr4_1:81167832-81167851 | None:intergenic | 55.0% | |
| CCTTGTGGAGGATAAGCAGC+AGG | + | chr4_1:81167868-81167887 | None:intergenic | 55.0% | |
| ! | CCTGCTGCTTATCCTCCACA+AGG | - | chr4_1:81167832-81167851 | Msa0576990:CDS | 55.0% |
| GAAGGGGGATATCCTTGTGG+AGG | + | chr4_1:81167880-81167899 | None:intergenic | 55.0% | |
| CCAGAAGGGGGATATCCTTG+TGG | + | chr4_1:81167883-81167902 | None:intergenic | 55.0% | |
| CCACAAGGATATCCCCCTTC+TGG | - | chr4_1:81167880-81167899 | Msa0576990:five_prime_UTR | 55.0% | |
| ! | AGAGAGAAAGCGCGTGGGTG+GGG | + | chr4_1:81161932-81161951 | None:intergenic | 60.0% |
| ! | GAGAGAGAAAGCGCGTGGGT+GGG | + | chr4_1:81161933-81161952 | None:intergenic | 60.0% |
| ! | AGAGAGAGAAAGCGCGTGGG+TGG | + | chr4_1:81161934-81161953 | None:intergenic | 60.0% |
| GCTGGTTACATGCCCTGCAG+TGG | - | chr4_1:81163739-81163758 | Msa0576990:intron | 60.0% | |
| ATGCCCTGCAGTGGTAGGTG+TGG | - | chr4_1:81163748-81163767 | Msa0576990:intron | 60.0% | |
| !! | CCTCTTGGGCGGATTGCCAA+AGG | + | chr4_1:81165473-81165492 | None:intergenic | 60.0% |
| CCTTTGGCAATCCGCCCAAG+AGG | - | chr4_1:81165470-81165489 | Msa0576990:intron | 60.0% | |
| AGGGAACTGACCCTCTTGGG+CGG | + | chr4_1:81165484-81165503 | None:intergenic | 60.0% | |
| GCCGAGCTGCCTGACTTCAA+GGG | + | chr4_1:81165503-81165522 | None:intergenic | 60.0% | |
| GAGGAAGTGAAGAGGGAGGG+GGG | + | chr4_1:81165718-81165737 | None:intergenic | 60.0% | |
| TAGGGTGTGTGCGTGCATGC+AGG | - | chr4_1:81167518-81167537 | Msa0576990:intron | 60.0% | |
| GTTTGGGCCGCAACCAGTGA+TGG | - | chr4_1:81167663-81167682 | Msa0576990:intron | 60.0% | |
| ! | GGCACTGCCATCACTGGTTG+CGG | + | chr4_1:81167673-81167692 | None:intergenic | 60.0% |
| !! | ACAGGAGGCACTGCCATCAC+TGG | + | chr4_1:81167679-81167698 | None:intergenic | 60.0% |
| GATAGCCCTGAGCTGGTGGT+TGG | + | chr4_1:81167795-81167814 | None:intergenic | 60.0% | |
| AGCAGGGGGGTAACCAGTAG+CGG | + | chr4_1:81167818-81167837 | None:intergenic | 60.0% | |
| GTGGAGGATAAGCAGCAGGG+GGG | + | chr4_1:81167831-81167850 | None:intergenic | 60.0% | |
| AGGCTCACAGCCGCCAAGTT+TGG | - | chr4_1:81168247-81168266 | Msa0576990:five_prime_UTR | 60.0% | |
| ! | AGAAAGCGCGTGGGTGGGGT+GGG | + | chr4_1:81161928-81161947 | None:intergenic | 65.0% |
| GGCCGAGCTGCCTGACTTCA+AGG | + | chr4_1:81165504-81165523 | None:intergenic | 65.0% | |
| GTCAGGCAGCTCGGCCTTCT+TGG | - | chr4_1:81165508-81165527 | Msa0576990:intron | 65.0% | |
| TGAGCTGGTGGTTGGGCAGG+TGG | + | chr4_1:81167787-81167806 | None:intergenic | 65.0% | |
| ACCTGCCCAACCACCAGCTC+AGG | - | chr4_1:81167786-81167805 | Msa0576990:CDS | 65.0% | |
| CCTGCCCAACCACCAGCTCA+GGG | - | chr4_1:81167787-81167806 | Msa0576990:CDS | 65.0% | |
| ! | GTAGCGGGATAGCCCTGAGC+TGG | + | chr4_1:81167802-81167821 | None:intergenic | 65.0% |
| GCTCAGGGCTATCCCGCTAC+TGG | - | chr4_1:81167802-81167821 | Msa0576990:CDS | 65.0% | |
| GCAGGGGGGTAACCAGTAGC+GGG | + | chr4_1:81167817-81167836 | None:intergenic | 65.0% | |
| ! | GAAAGCGCGTGGGTGGGGTG+GGG | + | chr4_1:81161927-81161946 | None:intergenic | 70.0% |
| ! | GAGAAAGCGCGTGGGTGGGG+TGG | + | chr4_1:81161929-81161948 | None:intergenic | 70.0% |
| CCCTGAGCTGGTGGTTGGGC+AGG | + | chr4_1:81167790-81167809 | None:intergenic | 70.0% | |
| GCGGGATAGCCCTGAGCTGG+TGG | + | chr4_1:81167799-81167818 | None:intergenic | 70.0% | |
| ! | GCGCGTGGGTGGGGTGGGGT+GGG | + | chr4_1:81161923-81161942 | None:intergenic | 80.0% |
| ! | AGCGCGTGGGTGGGGTGGGG+TGG | + | chr4_1:81161924-81161943 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 81161711 | 81168285 | 81161711 | ID=Msa0576990;Name=Msa0576990 |
| chr4_1 | mRNA | 81161711 | 81168285 | 81161711 | ID=Msa0576990-mRNA-1;Parent=Msa0576990;Name=Msa0576990-mRNA-1;_AED=0.07;_eAED=0.07;_QI=326|1|1|1|0.75|0.77|9|370|263 |
| chr4_1 | exon | 81161711 | 81162371 | 81161711 | ID=Msa0576990-mRNA-1:exon:29182;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81162457 | 81162475 | 81162457 | ID=Msa0576990-mRNA-1:exon:29181;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81162566 | 81162690 | 81162566 | ID=Msa0576990-mRNA-1:exon:29180;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81162939 | 81163034 | 81162939 | ID=Msa0576990-mRNA-1:exon:29179;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81166189 | 81166270 | 81166189 | ID=Msa0576990-mRNA-1:exon:29178;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81166351 | 81166407 | 81166351 | ID=Msa0576990-mRNA-1:exon:29177;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81167624 | 81167645 | 81167624 | ID=Msa0576990-mRNA-1:exon:29176;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81167752 | 81167907 | 81167752 | ID=Msa0576990-mRNA-1:exon:29175;Parent=Msa0576990-mRNA-1 |
| chr4_1 | exon | 81168016 | 81168285 | 81168016 | ID=Msa0576990-mRNA-1:exon:29174;Parent=Msa0576990-mRNA-1 |
| chr4_1 | five_prime_UTR | 81168016 | 81168285 | 81168016 | ID=Msa0576990-mRNA-1:five_prime_utr;Parent=Msa0576990-mRNA-1 |
| chr4_1 | five_prime_UTR | 81167852 | 81167907 | 81167852 | ID=Msa0576990-mRNA-1:five_prime_utr;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81167752 | 81167851 | 81167752 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81167624 | 81167645 | 81167624 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81166351 | 81166407 | 81166351 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81166189 | 81166270 | 81166189 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81162939 | 81163034 | 81162939 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81162566 | 81162690 | 81162566 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81162457 | 81162475 | 81162457 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | CDS | 81162081 | 81162371 | 81162081 | ID=Msa0576990-mRNA-1:cds;Parent=Msa0576990-mRNA-1 |
| chr4_1 | three_prime_UTR | 81161711 | 81162080 | 81161711 | ID=Msa0576990-mRNA-1:three_prime_utr;Parent=Msa0576990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
