Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528880 | XP_003599125.1 | 97.930 | 483 | 7 | 2 | 1 | 482 | 1 | 481 | 0.0 | 982 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528880 | sp|E0X9N4|C3H69_ARATH | 49.864 | 369 | 152 | 9 | 1 | 357 | 1 | 348 | 3.54e-109 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528880 | G7IWL7 | 97.930 | 483 | 7 | 2 | 1 | 482 | 1 | 481 | 0.0 | 982 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0528880 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0106710 | Msa0528880 | 0.802191 | 6.307231e-49 | -8.615850e-47 |
| Msa0207350 | Msa0528880 | 0.811644 | 6.316684e-51 | -8.615850e-47 |
| Msa0467100 | Msa0528880 | 0.808566 | 2.908661e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528880 | MtrunA17_Chr3g0087881 | 91.511 | 483 | 10 | 2 | 1 | 482 | 1 | 453 | 0.0 | 907 |
| Msa0528880 | MtrunA17_Chr3g0087891 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 7.49e-107 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528880 | AT3G08505.1 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
| Msa0528880 | AT3G08505.2 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
| Msa0528880 | AT3G08505.3 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 5.40e-100 | 303 |
Find 117 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 4_1:+1864889 | Msa0528880:CDS |
| AAGCCATCAGAATGTAAATT+TGG | 0.151196 | 4_1:+1861275 | Msa0528880:CDS |
| TTAGCCAAAACTCCTTAAAA+TGG | 0.236361 | 4_1:-1865228 | None:intergenic |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 4_1:+1861139 | Msa0528880:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 4_1:+1864904 | Msa0528880:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 4_1:+1860795 | Msa0528880:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 4_1:+1864709 | Msa0528880:CDS |
| GTGCTAAAGTAGCATCAAAT+TGG | 0.277566 | 4_1:+1860907 | Msa0528880:CDS |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 4_1:+1860854 | Msa0528880:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 4_1:+1861175 | Msa0528880:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 4_1:+1864814 | Msa0528880:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 4_1:+1861438 | Msa0528880:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 4_1:+1864720 | Msa0528880:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 4_1:+1864721 | Msa0528880:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 4_1:+1861649 | Msa0528880:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 4_1:-1864838 | None:intergenic |
| AGGTGACACAACTTAGTTAA+AGG | 0.354092 | 4_1:-1865109 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 4_1:+1864799 | Msa0528880:CDS |
| CAGAAAGCATGATCACATTC+TGG | 0.360354 | 4_1:-1861305 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 4_1:+1861650 | Msa0528880:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 4_1:-1861361 | None:intergenic |
| CCCTTTACACCACGCTTGTC+AGG | 0.379427 | 4_1:-1860957 | None:intergenic |
| GTTTGTCATGTATCCGCAAT+TGG | 0.381206 | 4_1:+1861327 | Msa0528880:CDS |
| CGTTTCTTATGAAAATCATT+TGG | 0.385079 | 4_1:+1865134 | Msa0528880:three_prime_UTR |
| CCTGACAAGCGTGGTGTAAA+GGG | 0.396694 | 4_1:+1860957 | Msa0528880:CDS |
| AAATTTACATTCTGATGGCT+TGG | 0.402203 | 4_1:-1861273 | None:intergenic |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 4_1:+1864890 | Msa0528880:CDS |
| AATTTACATTCTGATGGCTT+GGG | 0.409156 | 4_1:-1861272 | None:intergenic |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 4_1:+1864800 | Msa0528880:CDS |
| AATGATGATGCATTCTCATA+TGG | 0.418914 | 4_1:+1864975 | Msa0528880:CDS |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 4_1:-1864928 | None:intergenic |
| TGATGAATATTAGATTTACT+TGG | 0.430199 | 4_1:+1865047 | Msa0528880:exon |
| AGCCATCAGAATGTAAATTT+GGG | 0.430807 | 4_1:+1861276 | Msa0528880:CDS |
| ACCTGACAAGCGTGGTGTAA+AGG | 0.433230 | 4_1:+1860956 | Msa0528880:CDS |
| TCTTATGAAAATCATTTGGC+AGG | 0.438369 | 4_1:+1865138 | Msa0528880:three_prime_UTR |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 4_1:-1864685 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 4_1:+1859803 | Msa0528880:exon |
| TACGATAGTTTGCGGCAGAC+AGG | 0.445083 | 4_1:-1861413 | None:intergenic |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 4_1:-1861362 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 4_1:+1864751 | Msa0528880:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 4_1:+1861362 | Msa0528880:CDS |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 4_1:+1860781 | Msa0528880:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 4_1:-1864579 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 4_1:+1864792 | Msa0528880:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 4_1:+1860780 | Msa0528880:CDS |
| ATAATACCCTATGAAAAGAT+TGG | 0.470582 | 4_1:+1865306 | Msa0528880:three_prime_UTR |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 4_1:+1860977 | Msa0528880:CDS |
| AGAAGAGGAAGAAAAGTTGA+AGG | 0.480271 | 4_1:-1859746 | None:intergenic |
| AACCCAAATTTACATTCTGA+TGG | 0.489492 | 4_1:-1861278 | None:intergenic |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 4_1:+1864700 | Msa0528880:CDS |
| TGCTAAAGTAGCATCAAATT+GGG | 0.490703 | 4_1:+1860908 | Msa0528880:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 4_1:+1864678 | Msa0528880:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 4_1:-1861360 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 4_1:-1861664 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 4_1:+1864882 | Msa0528880:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 4_1:-1861021 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 4_1:-1864526 | None:intergenic |
| TACCCTATGAAAAGATTGGT+TGG | 0.507116 | 4_1:+1865310 | Msa0528880:three_prime_UTR |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 4_1:-1864745 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 4_1:-1860933 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 4_1:+1864696 | Msa0528880:CDS |
| TAGTTTGCGGCAGACAGGGC+AGG | 0.528295 | 4_1:-1861408 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.530414 | 4_1:-1861393 | None:intergenic |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 4_1:-1864647 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 4_1:+1861669 | Msa0528880:CDS |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 4_1:+1864752 | Msa0528880:CDS |
| GCGCGAGGCGTATGTTTGAA+AGG | 0.542739 | 4_1:+1860453 | Msa0528880:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.543300 | 4_1:+1861065 | Msa0528880:CDS |
| TTCAGATTCTGCTGCGCCTG+TGG | 0.544702 | 4_1:+1860878 | Msa0528880:CDS |
| ACGATAGTTTGCGGCAGACA+GGG | 0.555028 | 4_1:-1861412 | None:intergenic |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 4_1:+1864508 | Msa0528880:intron |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 4_1:-1864952 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 4_1:+1864786 | Msa0528880:CDS |
| AGAACATCCACCGGGGCAGT+TGG | 0.563489 | 4_1:-1861075 | None:intergenic |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 4_1:+1861451 | Msa0528880:CDS |
| TGACAAAATACGATAGTTTG+CGG | 0.568717 | 4_1:-1861421 | None:intergenic |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 4_1:+1860917 | Msa0528880:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 4_1:-1864549 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 4_1:+1861355 | Msa0528880:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 4_1:+1864582 | Msa0528880:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 4_1:-1864837 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 4_1:+1864876 | Msa0528880:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 4_1:-1860842 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 4_1:+1864804 | Msa0528880:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 4_1:+1860802 | Msa0528880:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 4_1:+1860926 | Msa0528880:CDS |
| ACACCACGCTTGTCAGGTGA+AGG | 0.590498 | 4_1:-1860951 | None:intergenic |
| GGTGGATGTTCTCGTATTCA+CGG | 0.596225 | 4_1:+1861086 | Msa0528880:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 4_1:-1864809 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 4_1:-1864899 | None:intergenic |
| TGAATACGAGAACATCCACC+GGG | 0.602886 | 4_1:-1861083 | None:intergenic |
| ACTTTAGCACTACGAGCCAC+AGG | 0.603612 | 4_1:-1860894 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 4_1:+1864703 | Msa0528880:CDS |
| GCTGCTGCCAACTGCCCCGG+TGG | 0.606750 | 4_1:+1861068 | Msa0528880:CDS |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 4_1:+1864521 | Msa0528880:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 4_1:+1861651 | Msa0528880:CDS |
| GATGTCGGTGAATCCAGTAC+TGG | 0.616230 | 4_1:+1861008 | Msa0528880:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 4_1:+1861495 | Msa0528880:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 4_1:+1864592 | Msa0528880:CDS |
| CATCAGGACTCTACCGATGT+CGG | 0.621122 | 4_1:+1860993 | Msa0528880:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 4_1:-1861446 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 4_1:+1861484 | Msa0528880:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 4_1:-1864733 | None:intergenic |
| GGGCACTACTACGCCAATTG+CGG | 0.634177 | 4_1:-1861340 | None:intergenic |
| GTGAATACGAGAACATCCAC+CGG | 0.635675 | 4_1:-1861084 | None:intergenic |
| AGTACTGGATTCACCGACAT+CGG | 0.635922 | 4_1:-1861006 | None:intergenic |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 4_1:+1864613 | Msa0528880:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 4_1:-1861366 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 4_1:-1859812 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 4_1:+1864533 | Msa0528880:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 4_1:-1864927 | None:intergenic |
| GATGCTACTAAACTTTAACA+AGG | 0.669505 | 4_1:-1865340 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.673427 | 4_1:+1860948 | Msa0528880:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 4_1:+1864837 | Msa0528880:CDS |
| AGAAGAAGATGAAGATTACG+AGG | 0.692698 | 4_1:+1865005 | Msa0528880:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 4_1:+1864597 | Msa0528880:CDS |
| GAATACGAGAACATCCACCG+GGG | 0.861616 | 4_1:-1861082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAAAATTTAATTTTT+AGG | + | chr4_1:1860171-1860190 | Msa0528880:intron | 0.0% |
| !!! | TTTTTAAAATTTAATTTTTA+GGG | + | chr4_1:1860172-1860191 | Msa0528880:intron | 0.0% |
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr4_1:1864283-1864302 | Msa0528880:intron | 0.0% |
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr4_1:1864284-1864303 | Msa0528880:intron | 0.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr4_1:1859951-1859970 | None:intergenic | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr4_1:1859952-1859971 | None:intergenic | 15.0% |
| !!! | GTTTAGGTTAATTTAATTTT+AGG | + | chr4_1:1860122-1860141 | Msa0528880:intron | 15.0% |
| !! | TGAAAGGAAAAAAAAAAATT+AGG | - | chr4_1:1861600-1861619 | None:intergenic | 15.0% |
| !!! | ATTTAATTTAGAATATGGAT+TGG | + | chr4_1:1862008-1862027 | Msa0528880:intron | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr4_1:1862689-1862708 | None:intergenic | 15.0% |
| !!! | GTATTATTTTAATCTGAAAT+TGG | - | chr4_1:1863362-1863381 | None:intergenic | 15.0% |
| !! | ATTTCAGATTAAAATAATAC+TGG | + | chr4_1:1863362-1863381 | Msa0528880:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr4_1:1864258-1864277 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr4_1:1864445-1864464 | None:intergenic | 15.0% |
| !!! | TTTTATATTAGTTTTTGAGA+TGG | + | chr4_1:1864445-1864464 | Msa0528880:intron | 15.0% |
| !! | AAATTCTGTTTGTAAATGTT+AGG | + | chr4_1:1860259-1860278 | Msa0528880:intron | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr4_1:1860345-1860364 | Msa0528880:intron | 20.0% |
| !! | TTAAATTTACGAATTGTTTC+AGG | + | chr4_1:1860415-1860434 | Msa0528880:intron | 20.0% |
| !! | TAAATTTACGAATTGTTTCA+GGG | + | chr4_1:1860416-1860435 | Msa0528880:intron | 20.0% |
| !! | ATACAAAGTAAAAAACACAT+TGG | - | chr4_1:1860722-1860741 | None:intergenic | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr4_1:1860737-1860756 | Msa0528880:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr4_1:1861044-1861063 | None:intergenic | 20.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr4_1:1861697-1861716 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr4_1:1861701-1861720 | Msa0528880:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr4_1:1861964-1861983 | Msa0528880:intron | 20.0% |
| !! | ATTGGCATTTATTAAAAGAA+AGG | - | chr4_1:1862084-1862103 | None:intergenic | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr4_1:1862180-1862199 | None:intergenic | 20.0% |
| !!! | GTTTACATTTTTTTTCTTAC+CGG | + | chr4_1:1862230-1862249 | Msa0528880:intron | 20.0% |
| !!! | TTTACATTTTTTTTCTTACC+GGG | + | chr4_1:1862231-1862250 | Msa0528880:intron | 20.0% |
| !! | ATACTGTGGAAATTAAATAT+GGG | - | chr4_1:1862513-1862532 | None:intergenic | 20.0% |
| !!! | AACATATTTTCAAAAATGGA+GGG | - | chr4_1:1862685-1862704 | None:intergenic | 20.0% |
| !!! | AAACATATTTTCAAAAATGG+AGG | - | chr4_1:1862686-1862705 | None:intergenic | 20.0% |
| !! | ATCACGAATATAAATCATAT+TGG | - | chr4_1:1862816-1862835 | None:intergenic | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr4_1:1863086-1863105 | Msa0528880:intron | 20.0% |
| !! | TTACTAGCATAATACATTAT+TGG | + | chr4_1:1863308-1863327 | Msa0528880:intron | 20.0% |
| !! | ATTAAAATAATACTGGTAGT+GGG | + | chr4_1:1863369-1863388 | Msa0528880:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr4_1:1863982-1864001 | None:intergenic | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr4_1:1864259-1864278 | None:intergenic | 20.0% |
| !! | CCTAAAATACTATGAAATAT+CGG | + | chr4_1:1864354-1864373 | Msa0528880:intron | 20.0% |
| !! | CTAAAATACTATGAAATATC+GGG | + | chr4_1:1864355-1864374 | Msa0528880:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr4_1:1864407-1864426 | Msa0528880:intron | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr4_1:1864435-1864454 | None:intergenic | 20.0% |
| !! | TGATGAATATTAGATTTACT+TGG | + | chr4_1:1865047-1865066 | Msa0528880:exon | 20.0% |
| !!! | TCAAAAACTGTTTAAAACTA+GGG | - | chr4_1:1865084-1865103 | None:intergenic | 20.0% |
| !!! | TTCAAAAACTGTTTAAAACT+AGG | - | chr4_1:1865085-1865104 | None:intergenic | 20.0% |
| ! | AATTGAAGAAATGTGAGAAA+CGG | - | chr4_1:1859856-1859875 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTTTTGCAATTT+AGG | + | chr4_1:1859901-1859920 | Msa0528880:intron | 25.0% |
| !!! | TTGTTAATCTTGTTGTTTGA+TGG | + | chr4_1:1859966-1859985 | Msa0528880:intron | 25.0% |
| !! | AATCAGTTCTTTTTCTGTTT+AGG | + | chr4_1:1860106-1860125 | Msa0528880:intron | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr4_1:1860780-1860799 | Msa0528880:CDS | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr4_1:1860781-1860800 | Msa0528880:CDS | 25.0% |
| !! | TCTTTTTCCTTTTTATCAGT+AGG | - | chr4_1:1861149-1861168 | None:intergenic | 25.0% |
| ! | AGGAAAAAGAAAATCATTTG+AGG | + | chr4_1:1861159-1861178 | Msa0528880:CDS | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr4_1:1861484-1861503 | Msa0528880:CDS | 25.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr4_1:1861555-1861574 | Msa0528880:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr4_1:1861839-1861858 | None:intergenic | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr4_1:1861843-1861862 | None:intergenic | 25.0% |
| ! | AAATTAAATCCCCCATAAAA+GGG | - | chr4_1:1861997-1862016 | None:intergenic | 25.0% |
| ! | TAAATTAAATCCCCCATAAA+AGG | - | chr4_1:1861998-1862017 | None:intergenic | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr4_1:1862102-1862121 | None:intergenic | 25.0% |
| !!! | TTACATTTTTTTTCTTACCG+GGG | + | chr4_1:1862232-1862251 | Msa0528880:intron | 25.0% |
| !!! | ATTTTTTTGTCTCATGTAGT+AGG | + | chr4_1:1862343-1862362 | Msa0528880:intron | 25.0% |
| ! | TACTACTACTTGTCTTTAAT+TGG | + | chr4_1:1862410-1862429 | Msa0528880:intron | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr4_1:1862485-1862504 | None:intergenic | 25.0% |
| ! | TACTGTGGAAATTAAATATG+GGG | - | chr4_1:1862512-1862531 | None:intergenic | 25.0% |
| ! | GATACTGTGGAAATTAAATA+TGG | - | chr4_1:1862514-1862533 | None:intergenic | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr4_1:1862746-1862765 | None:intergenic | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr4_1:1862754-1862773 | None:intergenic | 25.0% |
| !! | CTTAATCCTAATCATTGATT+TGG | - | chr4_1:1862987-1863006 | None:intergenic | 25.0% |
| ! | CAAATCAATGATTAGGATTA+AGG | + | chr4_1:1862985-1863004 | Msa0528880:intron | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr4_1:1863165-1863184 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr4_1:1863170-1863189 | Msa0528880:intron | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr4_1:1863174-1863193 | None:intergenic | 25.0% |
| ! | TATTATGCTAGTAACCTATA+GGG | - | chr4_1:1863302-1863321 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr4_1:1863319-1863338 | Msa0528880:intron | 25.0% |
| ! | GATTAAAATAATACTGGTAG+TGG | + | chr4_1:1863368-1863387 | Msa0528880:intron | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr4_1:1863651-1863670 | Msa0528880:intron | 25.0% |
| !!! | ATTTTTTCAAAGGATGAGTA+TGG | + | chr4_1:1863661-1863680 | Msa0528880:intron | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr4_1:1863936-1863955 | Msa0528880:intron | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr4_1:1864142-1864161 | None:intergenic | 25.0% |
| ! | TTAAAAGGGGAAAACAAATT+AGG | + | chr4_1:1864298-1864317 | Msa0528880:intron | 25.0% |
| !! | CCGATATTTCATAGTATTTT+AGG | - | chr4_1:1864357-1864376 | None:intergenic | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr4_1:1864636-1864655 | Msa0528880:CDS | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr4_1:1864861-1864880 | Msa0528880:CDS | 25.0% |
| ! | CGTTTCTTATGAAAATCATT+TGG | + | chr4_1:1865134-1865153 | Msa0528880:three_prime_UTR | 25.0% |
| !!! | ATCTTTTCATAGGGTATTAT+GGG | - | chr4_1:1865306-1865325 | None:intergenic | 25.0% |
| !!! | AATCTTTTCATAGGGTATTA+TGG | - | chr4_1:1865307-1865326 | None:intergenic | 25.0% |
| ! | ATAATACCCTATGAAAAGAT+TGG | + | chr4_1:1865306-1865325 | Msa0528880:three_prime_UTR | 25.0% |
| ! | TGCAATTTAGGTTTCAAAAG+AGG | + | chr4_1:1859913-1859932 | Msa0528880:intron | 30.0% |
| TCTGATGAGAAAAATCACAT+TGG | - | chr4_1:1860482-1860501 | None:intergenic | 30.0% | |
| ! | TGATTTTTCTCATCAGAGAA+AGG | + | chr4_1:1860485-1860504 | Msa0528880:CDS | 30.0% |
| TGCTAAAGTAGCATCAAATT+GGG | + | chr4_1:1860908-1860927 | Msa0528880:CDS | 30.0% | |
| AATTTACATTCTGATGGCTT+GGG | - | chr4_1:1861275-1861294 | None:intergenic | 30.0% | |
| AAATTTACATTCTGATGGCT+TGG | - | chr4_1:1861276-1861295 | None:intergenic | 30.0% | |
| AAGCCATCAGAATGTAAATT+TGG | + | chr4_1:1861275-1861294 | Msa0528880:CDS | 30.0% | |
| AGCCATCAGAATGTAAATTT+GGG | + | chr4_1:1861276-1861295 | Msa0528880:CDS | 30.0% | |
| AACCCAAATTTACATTCTGA+TGG | - | chr4_1:1861281-1861300 | None:intergenic | 30.0% | |
| TGACAAAATACGATAGTTTG+CGG | - | chr4_1:1861424-1861443 | None:intergenic | 30.0% | |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr4_1:1861451-1861470 | Msa0528880:CDS | 30.0% |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr4_1:1861463-1861482 | Msa0528880:CDS | 30.0% | |
| TTGCAATCAATCAATCTGAA+AGG | - | chr4_1:1861616-1861635 | None:intergenic | 30.0% | |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr4_1:1861634-1861653 | Msa0528880:CDS | 30.0% |
| GAAATGGAAATTGTCCATTT+GGG | + | chr4_1:1861650-1861669 | Msa0528880:CDS | 30.0% | |
| AAATGGAAATTGTCCATTTG+GGG | + | chr4_1:1861651-1861670 | Msa0528880:CDS | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr4_1:1861810-1861829 | None:intergenic | 30.0% | |
| GGGAAAACGGATAATTTATA+TGG | - | chr4_1:1861851-1861870 | None:intergenic | 30.0% | |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr4_1:1861983-1862002 | Msa0528880:intron | 30.0% |
| ! | GGGGGATTTAATTTAGAATA+TGG | + | chr4_1:1862003-1862022 | Msa0528880:intron | 30.0% |
| AGATGAAATAAGAGATACTG+TGG | - | chr4_1:1862527-1862546 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr4_1:1862565-1862584 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr4_1:1862566-1862585 | None:intergenic | 30.0% | |
| AGATTGAAGAAACTACTTCT+AGG | - | chr4_1:1862590-1862609 | None:intergenic | 30.0% | |
| AGAAGTAGTTTCTTCAATCT+TGG | + | chr4_1:1862590-1862609 | Msa0528880:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr4_1:1862906-1862925 | None:intergenic | 30.0% | |
| ACAATGCCAAATCAATGATT+AGG | + | chr4_1:1862978-1862997 | Msa0528880:intron | 30.0% | |
| ATGATAGAATAGTGTGTAAG+TGG | - | chr4_1:1863064-1863083 | None:intergenic | 30.0% | |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr4_1:1863158-1863177 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr4_1:1863159-1863178 | None:intergenic | 30.0% |
| !! | GTTTACTAGACTTGTTAATG+AGG | + | chr4_1:1863217-1863236 | Msa0528880:intron | 30.0% |
| ! | AGTCAGCCATAAAATTTTGT+AGG | + | chr4_1:1863240-1863259 | Msa0528880:intron | 30.0% |
| !! | ACAAATTTTGGGTGACTATA+GGG | - | chr4_1:1863271-1863290 | None:intergenic | 30.0% |
| !! | TACAAATTTTGGGTGACTAT+AGG | - | chr4_1:1863272-1863291 | None:intergenic | 30.0% |
| TATAGTCACCCAAAATTTGT+AGG | + | chr4_1:1863271-1863290 | Msa0528880:intron | 30.0% | |
| GTATTATGCTAGTAACCTAT+AGG | - | chr4_1:1863303-1863322 | None:intergenic | 30.0% | |
| ATTACCGTTTAGTATTGTAG+TGG | + | chr4_1:1863423-1863442 | Msa0528880:intron | 30.0% | |
| CTAACCACTACAATACTAAA+CGG | - | chr4_1:1863430-1863449 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr4_1:1863446-1863465 | Msa0528880:intron | 30.0% | |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr4_1:1863478-1863497 | None:intergenic | 30.0% |
| !! | GCAATTTGTTAATCTGAATG+TGG | - | chr4_1:1863589-1863608 | None:intergenic | 30.0% |
| TGGAAACAAGTACTATCATA+TGG | + | chr4_1:1863681-1863700 | Msa0528880:intron | 30.0% | |
| AACAGAAAAAAGACCAAAGA+GGG | + | chr4_1:1863751-1863770 | Msa0528880:intron | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr4_1:1863932-1863951 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr4_1:1864139-1864158 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr4_1:1864324-1864343 | None:intergenic | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr4_1:1864635-1864654 | Msa0528880:CDS | 30.0% |
| CAATTCCATGAAAATCATCA+GGG | - | chr4_1:1864930-1864949 | None:intergenic | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr4_1:1864931-1864950 | None:intergenic | 30.0% | |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr4_1:1864936-1864955 | Msa0528880:CDS | 30.0% |
| ! | AATGATGATGCATTCTCATA+TGG | + | chr4_1:1864975-1864994 | Msa0528880:CDS | 30.0% |
| ! | TGATTTTCATAAGAAACGAG+AGG | - | chr4_1:1865132-1865151 | None:intergenic | 30.0% |
| TCTTATGAAAATCATTTGGC+AGG | + | chr4_1:1865138-1865157 | Msa0528880:three_prime_UTR | 30.0% | |
| !!! | AGATCATATGCCATTTTTGA+AGG | + | chr4_1:1865197-1865216 | Msa0528880:three_prime_UTR | 30.0% |
| TTAGCCAAAACTCCTTAAAA+TGG | - | chr4_1:1865231-1865250 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGAGTTTTGGCTAA+AGG | + | chr4_1:1865231-1865250 | Msa0528880:three_prime_UTR | 30.0% |
| !!! | TTTAAGGAGTTTTGGCTAAA+GGG | + | chr4_1:1865232-1865251 | Msa0528880:three_prime_UTR | 30.0% |
| ! | AACCAACCAATCTTTTCATA+GGG | - | chr4_1:1865315-1865334 | None:intergenic | 30.0% |
| ! | AAACCAACCAATCTTTTCAT+AGG | - | chr4_1:1865316-1865335 | None:intergenic | 30.0% |
| GATGCTACTAAACTTTAACA+AGG | - | chr4_1:1865343-1865362 | None:intergenic | 30.0% | |
| AGAAGAGGAAGAAAAGTTGA+AGG | - | chr4_1:1859749-1859768 | None:intergenic | 35.0% | |
| !! | ACATGGTGAGATTTTAGGAA+CGG | - | chr4_1:1859798-1859817 | None:intergenic | 35.0% |
| TATCATTGTTGTCGATGTGT+CGG | + | chr4_1:1860645-1860664 | Msa0528880:intron | 35.0% | |
| GTGCTAAAGTAGCATCAAAT+TGG | + | chr4_1:1860907-1860926 | Msa0528880:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr4_1:1861175-1861194 | Msa0528880:CDS | 35.0% | |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr4_1:1861190-1861209 | Msa0528880:CDS | 35.0% |
| ! | TCGTATTTTGTCATTCCAAG+TGG | + | chr4_1:1861431-1861450 | Msa0528880:CDS | 35.0% |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr4_1:1861438-1861457 | Msa0528880:CDS | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr4_1:1861449-1861468 | None:intergenic | 35.0% | |
| AATTCTTGCAGCATACACAA+TGG | - | chr4_1:1861539-1861558 | None:intergenic | 35.0% | |
| !!! | GATTGCAAACATTTTGACTC+TGG | + | chr4_1:1861628-1861647 | Msa0528880:CDS | 35.0% |
| GGAAATGGAAATTGTCCATT+TGG | + | chr4_1:1861649-1861668 | Msa0528880:CDS | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr4_1:1861721-1861740 | None:intergenic | 35.0% | |
| CAACAAAGAAAGGAAAAGCA+TGG | - | chr4_1:1861800-1861819 | None:intergenic | 35.0% | |
| ! | CATGCTTTTCCTTTCTTTGT+TGG | + | chr4_1:1861798-1861817 | Msa0528880:intron | 35.0% |
| AACAACATCGACAAGGATTT+GGG | - | chr4_1:1861872-1861891 | None:intergenic | 35.0% | |
| ATAAGTCAACAACATCGACA+AGG | - | chr4_1:1861879-1861898 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr4_1:1861911-1861930 | None:intergenic | 35.0% | |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr4_1:1861982-1862001 | Msa0528880:intron | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr4_1:1861984-1862003 | Msa0528880:intron | 35.0% |
| GTGAATATCTTTCACCTCAT+AGG | + | chr4_1:1862124-1862143 | Msa0528880:intron | 35.0% | |
| !!! | ATTTTTTTTCTTACCGGGGA+TGG | + | chr4_1:1862236-1862255 | Msa0528880:intron | 35.0% |
| !!! | TTTTTTTTCTTACCGGGGAT+GGG | + | chr4_1:1862237-1862256 | Msa0528880:intron | 35.0% |
| !! | GCAAGTGGTATTTTGAACTT+TGG | + | chr4_1:1862365-1862384 | Msa0528880:intron | 35.0% |
| TGAAACTACTTGGAAGATCT+TGG | - | chr4_1:1862447-1862466 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGACA+AGG | - | chr4_1:1862471-1862490 | None:intergenic | 35.0% | |
| GTAGTTTCTTCAATCTTGGT+TGG | + | chr4_1:1862594-1862613 | Msa0528880:intron | 35.0% | |
| TTAGTGGTTTATAGGAGCAA+TGG | - | chr4_1:1862738-1862757 | None:intergenic | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr4_1:1862890-1862909 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr4_1:1862891-1862910 | None:intergenic | 35.0% | |
| GTATTCCAATGTGTAGTAAC+TGG | + | chr4_1:1862907-1862926 | Msa0528880:intron | 35.0% | |
| TTCTTCCAGTTACTACACAT+TGG | - | chr4_1:1862915-1862934 | None:intergenic | 35.0% | |
| ! | ACTTTTACTCCCTAATACAG+AGG | + | chr4_1:1863013-1863032 | Msa0528880:intron | 35.0% |
| GAATAGTGTGTAAGTGGTAA+AGG | - | chr4_1:1863058-1863077 | None:intergenic | 35.0% | |
| ! | TTAAGCTTTTACCCACCATA+TGG | + | chr4_1:1863194-1863213 | Msa0528880:intron | 35.0% |
| ! | TAAGCTTTTACCCACCATAT+GGG | + | chr4_1:1863195-1863214 | Msa0528880:intron | 35.0% |
| ACAAGTCTAGTAAACCCATA+TGG | - | chr4_1:1863212-1863231 | None:intergenic | 35.0% | |
| ! | GCCATAAAATTTTGTAGGCA+TGG | + | chr4_1:1863245-1863264 | Msa0528880:intron | 35.0% |
| ! | GCCATGCCTACAAAATTTTA+TGG | - | chr4_1:1863249-1863268 | None:intergenic | 35.0% |
| TCACCCAAAATTTGTAGGTA+TGG | + | chr4_1:1863276-1863295 | Msa0528880:intron | 35.0% | |
| CGTTTAGTATTGTAGTGGTT+AGG | + | chr4_1:1863428-1863447 | Msa0528880:intron | 35.0% | |
| GTATTGTAGTGGTTAGGTTA+TGG | + | chr4_1:1863434-1863453 | Msa0528880:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr4_1:1863445-1863464 | Msa0528880:intron | 35.0% | |
| !!! | GACACTCTTGTTTTTCCATT+TGG | + | chr4_1:1863540-1863559 | Msa0528880:intron | 35.0% |
| GATGTATTCGTTTGACCAAA+TGG | - | chr4_1:1863558-1863577 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr4_1:1863724-1863743 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr4_1:1863725-1863744 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr4_1:1863729-1863748 | None:intergenic | 35.0% | |
| GAACAGAAAAAAGACCAAAG+AGG | + | chr4_1:1863750-1863769 | Msa0528880:intron | 35.0% | |
| ACAGAAAAAAGACCAAAGAG+GGG | + | chr4_1:1863752-1863771 | Msa0528880:intron | 35.0% | |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr4_1:1863796-1863815 | Msa0528880:intron | 35.0% |
| TTGGCTGAAAATGATACTAG+AGG | + | chr4_1:1863819-1863838 | Msa0528880:intron | 35.0% | |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr4_1:1863943-1863962 | Msa0528880:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr4_1:1863944-1863963 | Msa0528880:intron | 35.0% |
| ACATGTCATGCATATCGAAA+TGG | - | chr4_1:1864582-1864601 | None:intergenic | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr4_1:1864582-1864601 | Msa0528880:CDS | 35.0% | |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr4_1:1864655-1864674 | Msa0528880:CDS | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr4_1:1864660-1864679 | Msa0528880:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr4_1:1864678-1864697 | Msa0528880:CDS | 35.0% |
| GATAATGCCATCATCTCAAA+TGG | - | chr4_1:1864688-1864707 | None:intergenic | 35.0% | |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr4_1:1864904-1864923 | Msa0528880:CDS | 35.0% |
| AGAAGAAGATGAAGATTACG+AGG | + | chr4_1:1865005-1865024 | Msa0528880:CDS | 35.0% | |
| AGGTGACACAACTTAGTTAA+AGG | - | chr4_1:1865112-1865131 | None:intergenic | 35.0% | |
| !!! | AAGGTCATGTTGCCATTTTA+AGG | + | chr4_1:1865216-1865235 | Msa0528880:three_prime_UTR | 35.0% |
| !!! | GTTGCCATTTTAAGGAGTTT+TGG | + | chr4_1:1865224-1865243 | Msa0528880:three_prime_UTR | 35.0% |
| !!! | TTGGCTAAAGGGTTTTGTTT+TGG | + | chr4_1:1865243-1865262 | Msa0528880:three_prime_UTR | 35.0% |
| !!! | GGGTTTTGTTTTGGATTTTG+TGG | + | chr4_1:1865252-1865271 | Msa0528880:three_prime_UTR | 35.0% |
| TACCCTATGAAAAGATTGGT+TGG | + | chr4_1:1865310-1865329 | Msa0528880:three_prime_UTR | 35.0% | |
| CAAAAACGAGAGAAGAGAAG+AGG | - | chr4_1:1859764-1859783 | None:intergenic | 40.0% | |
| ! | GTTGGACATGGTGAGATTTT+AGG | - | chr4_1:1859803-1859822 | None:intergenic | 40.0% |
| AAAATCTCACCATGTCCAAC+AGG | + | chr4_1:1859803-1859822 | Msa0528880:exon | 40.0% | |
| TGAGATTTACCTGTTGGACA+TGG | - | chr4_1:1859815-1859834 | None:intergenic | 40.0% | |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr4_1:1859821-1859840 | None:intergenic | 40.0% |
| GAGAAACGGTCGAAGAAAAA+AGG | - | chr4_1:1859842-1859861 | None:intergenic | 40.0% | |
| CACAAACACAAACACCAGAT+AGG | - | chr4_1:1860685-1860704 | None:intergenic | 40.0% | |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr4_1:1860845-1860864 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr4_1:1860854-1860873 | Msa0528880:CDS | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr4_1:1860936-1860955 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr4_1:1861142-1861161 | None:intergenic | 40.0% |
| CCTGCATCCTACTGATAAAA+AGG | + | chr4_1:1861139-1861158 | Msa0528880:CDS | 40.0% | |
| ! | CAGAAAGCATGATCACATTC+TGG | - | chr4_1:1861308-1861327 | None:intergenic | 40.0% |
| GTTTGTCATGTATCCGCAAT+TGG | + | chr4_1:1861327-1861346 | Msa0528880:CDS | 40.0% | |
| ATAACTACAAGGCAAACTGC+AGG | + | chr4_1:1861495-1861514 | Msa0528880:CDS | 40.0% | |
| ACAACATCGACAAGGATTTG+GGG | - | chr4_1:1861871-1861890 | None:intergenic | 40.0% | |
| CAACAACATCGACAAGGATT+TGG | - | chr4_1:1861873-1861892 | None:intergenic | 40.0% | |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr4_1:1861985-1862004 | Msa0528880:intron | 40.0% |
| CTCTACATCATCTTCCTATG+AGG | - | chr4_1:1862141-1862160 | None:intergenic | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr4_1:1862139-1862158 | Msa0528880:intron | 40.0% | |
| !!! | TTTTTTTCTTACCGGGGATG+GGG | + | chr4_1:1862238-1862257 | Msa0528880:intron | 40.0% |
| TACTTGGAAGATCTTGGAGA+CGG | - | chr4_1:1862441-1862460 | None:intergenic | 40.0% | |
| GTGACAAGGATGAAACTACT+TGG | - | chr4_1:1862457-1862476 | None:intergenic | 40.0% | |
| TGGTTTATAGGAGCAATGGA+CGG | - | chr4_1:1862734-1862753 | None:intergenic | 40.0% | |
| GAAAGTAGGGAATGTAACTG+AGG | - | chr4_1:1862877-1862896 | None:intergenic | 40.0% | |
| CAATGCGTCATAACTCAAAG+AGG | - | chr4_1:1863115-1863134 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr4_1:1863118-1863137 | Msa0528880:intron | 40.0% | |
| GTCTAGTAAACCCATATGGT+GGG | - | chr4_1:1863208-1863227 | None:intergenic | 40.0% | |
| AGTCTAGTAAACCCATATGG+TGG | - | chr4_1:1863209-1863228 | None:intergenic | 40.0% | |
| ! | GGGCCATACCTACAAATTTT+GGG | - | chr4_1:1863282-1863301 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr4_1:1863283-1863302 | None:intergenic | 40.0% |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr4_1:1863285-1863304 | Msa0528880:intron | 40.0% | |
| ACCAACTGAGCTACTTACTT+GGG | + | chr4_1:1863514-1863533 | Msa0528880:intron | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr4_1:1863618-1863637 | None:intergenic | 40.0% |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr4_1:1863712-1863731 | None:intergenic | 40.0% | |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr4_1:1863767-1863786 | None:intergenic | 40.0% |
| ACTCATTCTCAGATCACTCA+TGG | - | chr4_1:1863864-1863883 | None:intergenic | 40.0% | |
| AAGCATCAACAACAGTGTAG+GGG | - | chr4_1:1864032-1864051 | None:intergenic | 40.0% | |
| CAAGCATCAACAACAGTGTA+GGG | - | chr4_1:1864033-1864052 | None:intergenic | 40.0% | |
| ACAAGCATCAACAACAGTGT+AGG | - | chr4_1:1864034-1864053 | None:intergenic | 40.0% | |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr4_1:1864136-1864155 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr4_1:1864196-1864215 | None:intergenic | 40.0% |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr4_1:1864212-1864231 | None:intergenic | 40.0% | |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr4_1:1864228-1864247 | Msa0528880:intron | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr4_1:1864565-1864584 | None:intergenic | 40.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr4_1:1864650-1864669 | None:intergenic | 40.0% | |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr4_1:1864654-1864673 | Msa0528880:CDS | 40.0% |
| !! | TCCTTTTGATTCAGACGATG+AGG | + | chr4_1:1864744-1864763 | Msa0528880:CDS | 40.0% |
| TCCTCATCGTCTGAATCAAA+AGG | - | chr4_1:1864748-1864767 | None:intergenic | 40.0% | |
| ATTCAGACGATGAGGATGAT+GGG | + | chr4_1:1864752-1864771 | Msa0528880:CDS | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr4_1:1864786-1864805 | Msa0528880:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr4_1:1864902-1864921 | None:intergenic | 40.0% | |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr4_1:1864922-1864941 | Msa0528880:CDS | 40.0% |
| GATATCAAAGCTGCATCCAT+AGG | - | chr4_1:1864955-1864974 | None:intergenic | 40.0% | |
| GGCAACATGACCTTCAAAAA+TGG | - | chr4_1:1865210-1865229 | None:intergenic | 40.0% | |
| ! | TTTGGATTTTGTGGCTCATG+TGG | + | chr4_1:1865261-1865280 | Msa0528880:three_prime_UTR | 40.0% |
| !! | GTTTGCAAGTTTTATGCGCG+AGG | + | chr4_1:1860438-1860457 | Msa0528880:CDS | 45.0% |
| ! | GTGTCGGTGATTAGAGGTAT+CGG | - | chr4_1:1860579-1860598 | None:intergenic | 45.0% |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr4_1:1860795-1860814 | Msa0528880:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr4_1:1860802-1860821 | Msa0528880:CDS | 45.0% |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr4_1:1860917-1860936 | Msa0528880:CDS | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr4_1:1860926-1860945 | Msa0528880:CDS | 45.0% | |
| ! | AGTACTGGATTCACCGACAT+CGG | - | chr4_1:1861009-1861028 | None:intergenic | 45.0% |
| TGAATACGAGAACATCCACC+GGG | - | chr4_1:1861086-1861105 | None:intergenic | 45.0% | |
| GTGAATACGAGAACATCCAC+CGG | - | chr4_1:1861087-1861106 | None:intergenic | 45.0% | |
| GGTGGATGTTCTCGTATTCA+CGG | + | chr4_1:1861086-1861105 | Msa0528880:CDS | 45.0% | |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr4_1:1861208-1861227 | None:intergenic | 45.0% |
| !!! | CTGATGGCTTGGGTTTTGAA+AGG | - | chr4_1:1861265-1861284 | None:intergenic | 45.0% |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr4_1:1861363-1861382 | None:intergenic | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr4_1:1861364-1861383 | None:intergenic | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr4_1:1861362-1861381 | Msa0528880:CDS | 45.0% | |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr4_1:1861369-1861388 | None:intergenic | 45.0% |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr4_1:1861667-1861686 | None:intergenic | 45.0% | |
| CGACAAGGATTTGGGGAAAA+CGG | - | chr4_1:1861864-1861883 | None:intergenic | 45.0% | |
| TAATCCAGATGCGTGGTTAG+CGG | - | chr4_1:1861904-1861923 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr4_1:1862063-1862082 | None:intergenic | 45.0% | |
| !!! | TTTTTTCTTACCGGGGATGG+GGG | + | chr4_1:1862239-1862258 | Msa0528880:intron | 45.0% |
| TGTCTCATGTAGTAGGCAAG+TGG | + | chr4_1:1862350-1862369 | Msa0528880:intron | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr4_1:1862622-1862641 | None:intergenic | 45.0% | |
| TTATAGGAGCAATGGACGGA+GGG | - | chr4_1:1862730-1862749 | None:intergenic | 45.0% | |
| TTTATAGGAGCAATGGACGG+AGG | - | chr4_1:1862731-1862750 | None:intergenic | 45.0% | |
| CAACTAGCGCCTCTGTATTA+GGG | - | chr4_1:1863025-1863044 | None:intergenic | 45.0% | |
| TTGGAATAATGCTGGACTGC+TGG | + | chr4_1:1863327-1863346 | Msa0528880:intron | 45.0% | |
| !! | ATACTGGTAGTGGGTAAGAG+TGG | + | chr4_1:1863378-1863397 | Msa0528880:intron | 45.0% |
| ! | TAGTGGGTAAGAGTGGAAGT+AGG | + | chr4_1:1863385-1863404 | Msa0528880:intron | 45.0% |
| !! | TAGCTCAGTTGGTGAGCTAA+GGG | - | chr4_1:1863507-1863526 | None:intergenic | 45.0% |
| CACCAACTGAGCTACTTACT+TGG | + | chr4_1:1863513-1863532 | Msa0528880:intron | 45.0% | |
| TCCCAAGTAAGTAGCTCAGT+TGG | - | chr4_1:1863518-1863537 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr4_1:1863719-1863738 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr4_1:1863800-1863819 | Msa0528880:intron | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr4_1:1863808-1863827 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr4_1:1863831-1863850 | Msa0528880:intron | 45.0% | |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr4_1:1863948-1863967 | Msa0528880:intron | 45.0% |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr4_1:1864028-1864047 | None:intergenic | 45.0% | |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr4_1:1864104-1864123 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr4_1:1864105-1864124 | None:intergenic | 45.0% |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr4_1:1864133-1864152 | None:intergenic | 45.0% |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr4_1:1864198-1864217 | Msa0528880:intron | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr4_1:1864199-1864218 | Msa0528880:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr4_1:1864211-1864230 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr4_1:1864235-1864254 | None:intergenic | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr4_1:1864508-1864527 | Msa0528880:intron | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr4_1:1864592-1864611 | Msa0528880:CDS | 45.0% | |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr4_1:1864613-1864632 | Msa0528880:CDS | 45.0% |
| GATGGCATTATCAGATTCGC+TGG | + | chr4_1:1864696-1864715 | Msa0528880:CDS | 45.0% | |
| GATTCAGACGATGAGGATGA+TGG | + | chr4_1:1864751-1864770 | Msa0528880:CDS | 45.0% | |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr4_1:1864285-1864304 | Msa0528880:intron | 5.0% |
| ! | AGTGTCGTGTCGGTGATTAG+AGG | - | chr4_1:1860585-1860604 | None:intergenic | 50.0% |
| TGTCGTGTCAGTGTCCTATC+TGG | + | chr4_1:1860668-1860687 | Msa0528880:intron | 50.0% | |
| ACTTTAGCACTACGAGCCAC+AGG | - | chr4_1:1860897-1860916 | None:intergenic | 50.0% | |
| ACCTGACAAGCGTGGTGTAA+AGG | + | chr4_1:1860956-1860975 | Msa0528880:CDS | 50.0% | |
| CCTGACAAGCGTGGTGTAAA+GGG | + | chr4_1:1860957-1860976 | Msa0528880:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr4_1:1860977-1860996 | Msa0528880:CDS | 50.0% | |
| CATCAGGACTCTACCGATGT+CGG | + | chr4_1:1860993-1861012 | Msa0528880:CDS | 50.0% | |
| GATGTCGGTGAATCCAGTAC+TGG | + | chr4_1:1861008-1861027 | Msa0528880:CDS | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr4_1:1861024-1861043 | None:intergenic | 50.0% | |
| GAATACGAGAACATCCACCG+GGG | - | chr4_1:1861085-1861104 | None:intergenic | 50.0% | |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr4_1:1861365-1861384 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr4_1:1861396-1861415 | None:intergenic | 50.0% | |
| ! | ACGATAGTTTGCGGCAGACA+GGG | - | chr4_1:1861415-1861434 | None:intergenic | 50.0% |
| ! | TACGATAGTTTGCGGCAGAC+AGG | - | chr4_1:1861416-1861435 | None:intergenic | 50.0% |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr4_1:1861669-1861688 | Msa0528880:CDS | 50.0% |
| AATCCAGATGCGTGGTTAGC+GGG | - | chr4_1:1861903-1861922 | None:intergenic | 50.0% | |
| GTTATCTTAACCCCCATCCC+CGG | - | chr4_1:1862252-1862271 | None:intergenic | 50.0% | |
| TTGGAAGATCTTGGAGACGG+TGG | - | chr4_1:1862438-1862457 | None:intergenic | 50.0% | |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr4_1:1862604-1862623 | Msa0528880:intron | 50.0% |
| TATAGGAGCAATGGACGGAG+GGG | - | chr4_1:1862729-1862748 | None:intergenic | 50.0% | |
| GCAACTAGCGCCTCTGTATT+AGG | - | chr4_1:1863026-1863045 | None:intergenic | 50.0% | |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr4_1:1863124-1863143 | Msa0528880:intron | 50.0% |
| TAATGCTGGACTGCTGGTAG+TGG | + | chr4_1:1863333-1863352 | Msa0528880:intron | 50.0% | |
| GGTGAGCTAAGGGACATCAA+AGG | - | chr4_1:1863497-1863516 | None:intergenic | 50.0% | |
| !! | GTAGCTCAGTTGGTGAGCTA+AGG | - | chr4_1:1863508-1863527 | None:intergenic | 50.0% |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr4_1:1863897-1863916 | Msa0528880:intron | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr4_1:1864027-1864046 | None:intergenic | 50.0% | |
| CATCAACAACAGTGTAGGGG+AGG | - | chr4_1:1864029-1864048 | None:intergenic | 50.0% | |
| GTTTCGGTAGGCTAGGACAA+TGG | - | chr4_1:1864066-1864085 | None:intergenic | 50.0% | |
| TTCAAGGGTTTCGGTAGGCT+AGG | - | chr4_1:1864073-1864092 | None:intergenic | 50.0% | |
| CTGTGTTCAAGGGTTTCGGT+AGG | - | chr4_1:1864078-1864097 | None:intergenic | 50.0% | |
| GTGGCTGTGTTCAAGGGTTT+CGG | - | chr4_1:1864082-1864101 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr4_1:1864088-1864107 | None:intergenic | 50.0% | |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr4_1:1864089-1864108 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr4_1:1864101-1864120 | None:intergenic | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr4_1:1864130-1864149 | None:intergenic | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr4_1:1864192-1864211 | None:intergenic | 50.0% |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr4_1:1864217-1864236 | Msa0528880:intron | 50.0% | |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr4_1:1864239-1864258 | Msa0528880:intron | 50.0% |
| TGAAGCCTGGCTCATACACA+TGG | + | chr4_1:1864521-1864540 | Msa0528880:CDS | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr4_1:1864529-1864548 | None:intergenic | 50.0% | |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr4_1:1864559-1864578 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr4_1:1864562-1864581 | None:intergenic | 50.0% |
| GCATTATCAGATTCGCTGGC+TGG | + | chr4_1:1864700-1864719 | Msa0528880:CDS | 50.0% | |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr4_1:1864703-1864722 | Msa0528880:CDS | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr4_1:1864814-1864833 | Msa0528880:CDS | 50.0% |
| CCTCATCGTCATCGTCATCA+GGG | - | chr4_1:1864840-1864859 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr4_1:1864841-1864860 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr4_1:1864876-1864895 | Msa0528880:CDS | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr4_1:1864889-1864908 | Msa0528880:CDS | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr4_1:1864890-1864909 | Msa0528880:CDS | 50.0% | |
| GCGCGAGGCGTATGTTTGAA+AGG | + | chr4_1:1860453-1860472 | Msa0528880:CDS | 55.0% | |
| CACACGAGTCAGTGTCGTGT+CGG | - | chr4_1:1860595-1860614 | None:intergenic | 55.0% | |
| TTCAGATTCTGCTGCGCCTG+TGG | + | chr4_1:1860878-1860897 | Msa0528880:CDS | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr4_1:1860948-1860967 | Msa0528880:CDS | 55.0% | |
| ACACCACGCTTGTCAGGTGA+AGG | - | chr4_1:1860954-1860973 | None:intergenic | 55.0% | |
| CCCTTTACACCACGCTTGTC+AGG | - | chr4_1:1860960-1860979 | None:intergenic | 55.0% | |
| GGGCACTACTACGCCAATTG+CGG | - | chr4_1:1861343-1861362 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr4_1:1861355-1861374 | Msa0528880:CDS | 55.0% | |
| TCGGTAGGCTAGGACAATGG+TGG | - | chr4_1:1864063-1864082 | None:intergenic | 55.0% | |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr4_1:1864113-1864132 | None:intergenic | 55.0% |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr4_1:1864208-1864227 | None:intergenic | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr4_1:1864533-1864552 | Msa0528880:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr4_1:1864597-1864616 | Msa0528880:CDS | 55.0% |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr4_1:1864792-1864811 | Msa0528880:CDS | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr4_1:1864799-1864818 | Msa0528880:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr4_1:1864800-1864819 | Msa0528880:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr4_1:1864812-1864831 | None:intergenic | 55.0% | |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr4_1:1864837-1864856 | Msa0528880:CDS | 55.0% |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr4_1:1861065-1861084 | Msa0528880:CDS | 60.0% | |
| AGAACATCCACCGGGGCAGT+TGG | - | chr4_1:1861078-1861097 | None:intergenic | 60.0% | |
| ! | TAGTTTGCGGCAGACAGGGC+AGG | - | chr4_1:1861411-1861430 | None:intergenic | 60.0% |
| ATGCCCGCTAACCACGCATC+TGG | + | chr4_1:1861897-1861916 | Msa0528880:intron | 60.0% | |
| AGCAATGGACGGAGGGGTGA+TGG | - | chr4_1:1862723-1862742 | None:intergenic | 60.0% | |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr4_1:1864013-1864032 | None:intergenic | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr4_1:1864014-1864033 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr4_1:1864018-1864037 | None:intergenic | 60.0% | |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr4_1:1864120-1864139 | None:intergenic | 60.0% |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr4_1:1864124-1864143 | None:intergenic | 60.0% |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr4_1:1864804-1864823 | Msa0528880:CDS | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr4_1:1864882-1864901 | Msa0528880:CDS | 60.0% | |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr4_1:1864552-1864571 | None:intergenic | 65.0% |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr4_1:1864709-1864728 | Msa0528880:CDS | 65.0% |
| GCTGCTGCCAACTGCCCCGG+TGG | + | chr4_1:1861068-1861087 | Msa0528880:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 1859741 | 1865410 | 1859741 | ID=Msa0528880;Name=Msa0528880 |
| chr4_1 | mRNA | 1859741 | 1865410 | 1859741 | ID=Msa0528880-mRNA-1;Parent=Msa0528880;Name=Msa0528880-mRNA-1;_AED=0.27;_eAED=0.27;_QI=73|1|1|1|0.75|0.8|5|351|482 |
| chr4_1 | exon | 1859741 | 1859824 | 1859741 | ID=Msa0528880-mRNA-1:exon:551;Parent=Msa0528880-mRNA-1 |
| chr4_1 | exon | 1860437 | 1860521 | 1860437 | ID=Msa0528880-mRNA-1:exon:552;Parent=Msa0528880-mRNA-1 |
| chr4_1 | exon | 1860780 | 1861516 | 1860780 | ID=Msa0528880-mRNA-1:exon:553;Parent=Msa0528880-mRNA-1 |
| chr4_1 | exon | 1861621 | 1861690 | 1861621 | ID=Msa0528880-mRNA-1:exon:554;Parent=Msa0528880-mRNA-1 |
| chr4_1 | exon | 1864514 | 1865410 | 1864514 | ID=Msa0528880-mRNA-1:exon:555;Parent=Msa0528880-mRNA-1 |
| chr4_1 | five_prime_UTR | 1859741 | 1859813 | 1859741 | ID=Msa0528880-mRNA-1:five_prime_utr;Parent=Msa0528880-mRNA-1 |
| chr4_1 | CDS | 1859814 | 1859824 | 1859814 | ID=Msa0528880-mRNA-1:cds;Parent=Msa0528880-mRNA-1 |
| chr4_1 | CDS | 1860437 | 1860521 | 1860437 | ID=Msa0528880-mRNA-1:cds;Parent=Msa0528880-mRNA-1 |
| chr4_1 | CDS | 1860780 | 1861516 | 1860780 | ID=Msa0528880-mRNA-1:cds;Parent=Msa0528880-mRNA-1 |
| chr4_1 | CDS | 1861621 | 1861690 | 1861621 | ID=Msa0528880-mRNA-1:cds;Parent=Msa0528880-mRNA-1 |
| chr4_1 | CDS | 1864514 | 1865059 | 1864514 | ID=Msa0528880-mRNA-1:cds;Parent=Msa0528880-mRNA-1 |
| chr4_1 | three_prime_UTR | 1865060 | 1865410 | 1865060 | ID=Msa0528880-mRNA-1:three_prime_utr;Parent=Msa0528880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
