AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0545600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545600 MtrunA17_Chr4g0026331 98.065 155 3 0 214 368 1 155 3.24e-109 316
Msa0545600 MtrunA17_Chr2g0321501 73.548 155 41 0 214 368 1 155 6.21e-80 241
Msa0545600 MtrunA17_Chr1g0210631 65.385 156 48 3 217 368 65 218 6.22e-62 197
Msa0545600 MtrunA17_Chr1g0210661 63.871 155 50 3 217 367 1 153 7.94e-60 190
Msa0545600 MtrunA17_Chr2g0277481 60.000 135 39 4 237 367 25 148 5.79e-48 159
Msa0545600 MtrunA17_Chr8g0380641 64.220 109 38 1 259 367 39 146 2.70e-44 150
Msa0545600 MtrunA17_Chr7g0255021 43.373 166 92 1 44 209 77 240 2.25e-40 146
Msa0545600 MtrunA17_Chr5g0394481 41.414 99 56 2 269 367 47 143 1.51e-19 84.3
Msa0545600 MtrunA17_Chr4g0054691 29.032 155 107 1 217 368 5 159 3.53e-16 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0545600 AT2G27510.1 60.000 155 59 2 217 368 1 155 7.08e-59 188
Msa0545600 AT1G60950.1 66.667 111 34 2 259 367 38 147 1.06e-45 154
Msa0545600 AT1G10960.1 58.209 134 48 4 233 364 17 144 9.23e-44 149
Msa0545600 AT5G10000.1 52.475 101 48 0 267 367 47 147 3.30e-35 126
Msa0545600 AT5G41220.3 40.252 159 85 4 67 216 208 365 7.74e-26 108
Msa0545600 AT5G41220.2 40.252 159 85 4 67 216 216 373 8.51e-26 108
Msa0545600 AT5G41220.1 40.252 159 85 4 67 216 266 423 8.99e-26 108
Msa0545600 AT3G47680.1 36.416 173 96 4 51 210 22 193 1.22e-23 99.8
Msa0545600 AT4G14890.1 46.316 95 49 2 273 367 52 144 1.31e-20 87.8
Msa0545600 AT5G41240.1 38.158 152 82 5 67 207 266 416 1.26e-18 87.8
Msa0545600 AT1G32550.1 38.372 86 53 0 283 368 69 154 3.20e-16 76.3
Msa0545600 AT1G66235.1 30.469 128 86 2 74 198 7 134 5.08e-11 63.2
Msa0545600 AT1G32550.2 35.294 102 47 3 283 368 69 167 7.46e-11 61.2

Find 86 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAGTTCCCTTCATCTTTC+GGG 0.151505 4_1:-36058219 Msa0545600:CDS
ATTGCTTCTCCCTTCCATTT+TGG 0.196407 4_1:+36061759 None:intergenic
TGTGCTGGAAAGATTGTTTC+TGG 0.213905 4_1:-36057989 Msa0545600:CDS
GCTCCAGCACGGCATGAATA+AGG 0.234304 4_1:+36058022 None:intergenic
AATTGACCCGATTCCTTCTT+TGG 0.239520 4_1:+36061969 None:intergenic
GCTTACAAGGTCAAGCTTAT+TGG 0.250602 4_1:-36058127 Msa0545600:CDS
GCGAAGTTCCCTTCATCTTT+CGG 0.263582 4_1:-36058220 Msa0545600:CDS
TCAATCTGATGGCTCTTTCT+TGG 0.285813 4_1:-36057957 Msa0545600:CDS
TGACTTCAAGCCACAAGATT+TGG 0.293119 4_1:+36058180 None:intergenic
CTTGGATGATAATCAACTTA+AGG 0.311771 4_1:-36057939 Msa0545600:CDS
GAAAGTTAAAACTATTGCTT+GGG 0.337858 4_1:-36057820 Msa0545600:three_prime_UTR
CCACAATTCTCCAATCAAAT+TGG 0.338259 4_1:-36062227 Msa0545600:CDS
TCCACACCGCTGTCACATAT+TGG 0.369711 4_1:+36062266 None:intergenic
TGAAGGACCAAGTTCTAATA+AGG 0.380769 4_1:-36062153 Msa0545600:CDS
TATTGAAAGATGAACCAAAA+TGG 0.397482 4_1:-36061773 Msa0545600:CDS
TGAAAGTTAAAACTATTGCT+TGG 0.399191 4_1:-36057821 Msa0545600:three_prime_UTR
AACTGCAATGGCTGCTTACA+AGG 0.410013 4_1:-36058140 Msa0545600:CDS
CTCCCTTATTCATGCCGTGC+TGG 0.418450 4_1:-36058025 Msa0545600:CDS
TCTAAGATGTAAACATCGTC+GGG 0.429231 4_1:+36058073 None:intergenic
ATATTGGAATTCGTTGTTGA+TGG 0.429454 4_1:+36062282 None:intergenic
GAATCGGGTCAATTAAAATC+TGG 0.433589 4_1:-36061960 Msa0545600:CDS
GGAGCTTGCTCCACTTGTGC+TGG 0.438234 4_1:-36058004 Msa0545600:CDS
CTCCAGCACGGCATGAATAA+GGG 0.444632 4_1:+36058023 None:intergenic
TGGTTCTCGACCAATTTGAT+TGG 0.445998 4_1:+36062217 None:intergenic
CTCTATCTTGATATATGCAT+TGG 0.447851 4_1:-36057537 Msa0545600:three_prime_UTR
CAGTTTGAATCATGCATAGC+GGG 0.450595 4_1:+36058275 None:intergenic
TTTCTGGAACAATTTATGAA+TGG 0.450990 4_1:+36057596 None:intergenic
TCAACTTCCAAAGAAGGAAT+CGG 0.453877 4_1:-36061976 Msa0545600:CDS
TACACGTGTTAGTAAGTTTG+TGG 0.462146 4_1:-36061922 Msa0545600:CDS
CGAACTCTACTGAGAAATGT+TGG 0.472665 4_1:-36057849 Msa0545600:exon
CCAATTTGATTGGAGAATTG+TGG 0.478970 4_1:+36062227 None:intergenic
TACTAACACGTGTATTCAAT+CGG 0.480503 4_1:+36061931 None:intergenic
TGGAAAGATTGTTTCTGGCT+CGG 0.490169 4_1:-36057984 Msa0545600:CDS
TATGCAATCTGCGGTTGGAT+AGG 0.494449 4_1:+36057892 None:intergenic
AAATCTTTGTTGTTCATGCA+TGG 0.495435 4_1:-36061800 Msa0545600:CDS
AACAATCTTTCCAGCACAAG+TGG 0.505407 4_1:+36057994 None:intergenic
TAGAGATGTGTATTGTTGAA+TGG 0.506648 4_1:+36057555 None:intergenic
GTCAAGCTTATTGGACCAGA+TGG 0.514160 4_1:-36058118 Msa0545600:CDS
CAACTTCCAAAGAAGGAATC+GGG 0.518348 4_1:-36061975 Msa0545600:CDS
TTTGTAGACCCGAAAGATGA+AGG 0.518911 4_1:+36058211 None:intergenic
GAACATATTACGCTCGATGA+AGG 0.524048 4_1:-36062170 Msa0545600:CDS
GAATTCGTTGTTGATGGTGG+TGG 0.526954 4_1:+36062288 None:intergenic
ACACGTGTTAGTAAGTTTGT+GGG 0.530537 4_1:-36061921 Msa0545600:CDS
GAAAGATGAACCAAAATGGA+AGG 0.533051 4_1:-36061769 Msa0545600:CDS
GAACTCTACTGAGAAATGTT+GGG 0.533588 4_1:-36057848 Msa0545600:exon
ATCTAAGATGTAAACATCGT+CGG 0.538845 4_1:+36058072 None:intergenic
ACAAAGGTTTCTACTAGTGA+AGG 0.540192 4_1:-36061717 Msa0545600:CDS
GTAGTTAATCAAAACAAAAG+TGG 0.541648 4_1:-36061885 Msa0545600:CDS
GGCTCGGTGGATCAATCTGA+TGG 0.542825 4_1:-36057968 Msa0545600:CDS
AAGAGTGTTTCCAAATCTTG+TGG 0.543692 4_1:-36058190 Msa0545600:CDS
CTTTGGAAGTTGATTGCGGT+AGG 0.547447 4_1:+36061986 None:intergenic
GATGATAATCAACTTAAGGA+TGG 0.547500 4_1:-36057935 Msa0545600:CDS
TCAATTATGCAATCTGCGGT+TGG 0.549164 4_1:+36057887 None:intergenic
CCGCAATCAACTTCCAAAGA+AGG 0.551378 4_1:-36061982 Msa0545600:CDS
TCAATTGAAGCGGAGAGTTG+TGG 0.576311 4_1:+36062197 None:intergenic
TTAGATGCAGCAGAAGATGC+CGG 0.586722 4_1:-36058055 Msa0545600:CDS
CCTTCTTTGGAAGTTGATTG+CGG 0.597110 4_1:+36061982 None:intergenic
ATAGAATGACTGAGGCACAT+AGG 0.600533 4_1:-36061848 Msa0545600:CDS
TTGGAATTCGTTGTTGATGG+TGG 0.600567 4_1:+36062285 None:intergenic
TAGCAATGGTTGATTGATTG+CGG 0.600774 4_1:+36058248 None:intergenic
TTCATATAGAACAACTGCAA+TGG 0.601127 4_1:-36058152 Msa0545600:CDS
GAACTTCGCTGTGGTAGCAA+TGG 0.602045 4_1:+36058234 None:intergenic
TCCAATATGTGACAGCGGTG+TGG 0.603024 4_1:-36062267 Msa0545600:CDS
AAAGATGAACCAAAATGGAA+GGG 0.603621 4_1:-36061768 Msa0545600:CDS
TGAATAAGGGAGTTCAACTC+CGG 0.604511 4_1:+36058036 None:intergenic
TTGTAGACCCGAAAGATGAA+GGG 0.611828 4_1:+36058212 None:intergenic
AAGTGGAGCAAGCTCCAGCA+CGG 0.615367 4_1:+36058011 None:intergenic
AAAGATTGTTTCTGGCTCGG+TGG 0.616952 4_1:-36057981 Msa0545600:CDS
CAAAGGTTTCTACTAGTGAA+GGG 0.617862 4_1:-36061716 Msa0545600:intron
ATAATTGAAACTCACAAGGA+AGG 0.627357 4_1:-36057872 Msa0545600:CDS
GGAAACATTCACAGCTGACA+AGG 0.632858 4_1:+36058297 None:intergenic
AAAGTTAAAACTATTGCTTG+GGG 0.634514 4_1:-36057819 Msa0545600:three_prime_UTR
GGATTTATACACAAGATACA+AGG 0.636036 4_1:-36061827 Msa0545600:CDS
ATGTTCAAGATCAATTGAAG+CGG 0.642160 4_1:+36062187 None:intergenic
AAACAAAAGTGGTCGCTCTG+AGG 0.657124 4_1:-36061874 Msa0545600:CDS
TGCGGTTGGATAGGAAACAC+AGG 0.661542 4_1:+36057901 None:intergenic
AGTTTCAATTATGCAATCTG+CGG 0.680241 4_1:+36057883 None:intergenic
GCAGTTTGAATCATGCATAG+CGG 0.684816 4_1:+36058274 None:intergenic
TTGCATAATTGAAACTCACA+AGG 0.686967 4_1:-36057876 Msa0545600:CDS
TGAGGATGATAGAATGACTG+AGG 0.688045 4_1:-36061856 Msa0545600:CDS
TCTTTGTTGTTCATGCATGG+CGG 0.688203 4_1:-36061797 Msa0545600:CDS
CGAATTCCAATATGTGACAG+CGG 0.690254 4_1:-36062272 Msa0545600:CDS
CTAAGATGTAAACATCGTCG+GGG 0.693590 4_1:+36058074 None:intergenic
TAAGATGTAAACATCGTCGG+GGG 0.711580 4_1:+36058075 None:intergenic
AGTTTGAATCATGCATAGCG+GGG 0.714486 4_1:+36058276 None:intergenic
AGATGAAGGGAACTTCGCTG+TGG 0.735830 4_1:+36058225 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATTTACTTTATTAAT+AGG + chr4_1:36059018-36059037 None:intergenic 10.0%
!! AGAAAAAATTAAATCTGTAT+TGG - chr4_1:36059259-36059278 Msa0545600:intron 15.0%
!! TAATAATGAATAATTGAAGA+TGG + chr4_1:36059876-36059895 None:intergenic 15.0%
!! TAAATAGATTTAAAGACAAA+AGG - chr4_1:36060902-36060921 Msa0545600:intron 15.0%
!!! TGGTGGATAAAAATAATATT+GGG + chr4_1:36057554-36057573 None:intergenic 20.0%
!! AATACAACCACTTATAATAT+GGG - chr4_1:36058327-36058346 Msa0545600:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + chr4_1:36059181-36059200 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + chr4_1:36059182-36059201 None:intergenic 20.0%
!!! TTGCTTTAGTTATTTTTTGT+GGG + chr4_1:36059452-36059471 None:intergenic 20.0%
!! AGAAAGAAAAAAGTGAATTA+AGG - chr4_1:36059549-36059568 Msa0545600:intron 20.0%
!! GAAAGAAAAAAGTGAATTAA+GGG - chr4_1:36059550-36059569 Msa0545600:intron 20.0%
!! AAAGAAAAAAGTGAATTAAG+GGG - chr4_1:36059551-36059570 Msa0545600:intron 20.0%
!! TATTATATCCTTAATCAACT+TGG - chr4_1:36059891-36059910 Msa0545600:intron 20.0%
!!! TTTTTAAACCTCTTTGATTT+TGG - chr4_1:36059955-36059974 Msa0545600:intron 20.0%
!!! TTTAGTTGTTTTGTTGATTA+CGG - chr4_1:36060077-36060096 Msa0545600:intron 20.0%
!! ATTTAGTTGCATTTCTTTAT+TGG - chr4_1:36060793-36060812 Msa0545600:intron 20.0%
!!! TGCAATTTTTTGTTTTTGAA+TGG - chr4_1:36061142-36061161 Msa0545600:intron 20.0%
!!! CTATTGTTATTTAAAGAATG+TGG - chr4_1:36061445-36061464 Msa0545600:intron 20.0%
!!! TTTAGTATCAACTTTTCTTT+TGG - chr4_1:36062109-36062128 Msa0545600:CDS 20.0%
!!! TTCTTTTGGCATTATTTATT+TGG - chr4_1:36062123-36062142 Msa0545600:CDS 20.0%
!!! TAGTTTTTAGATTATAAGCT+TGG - chr4_1:36062187-36062206 Msa0545600:CDS 20.0%
!! AAAAAGAAAGTGAAAATTTC+TGG + chr4_1:36062279-36062298 None:intergenic 20.0%
! GGTGGATAAAAATAATATTG+GGG + chr4_1:36057553-36057572 None:intergenic 25.0%
!!! GTGGTGGATAAAAATAATAT+TGG + chr4_1:36057555-36057574 None:intergenic 25.0%
! GTAGTTAATCAAAACAAAAG+TGG - chr4_1:36057971-36057990 Msa0545600:CDS 25.0%
! TATTGAAAGATGAACCAAAA+TGG - chr4_1:36058083-36058102 Msa0545600:CDS 25.0%
! AAACTCTTCAAAAAGAACAA+AGG - chr4_1:36058123-36058142 Msa0545600:CDS 25.0%
!!! TTAATGTCATTATTTTAGCC+CGG + chr4_1:36058241-36058260 None:intergenic 25.0%
! TGTATTCACTGTGTATTATT+GGG + chr4_1:36058313-36058332 None:intergenic 25.0%
! TTGTATTCACTGTGTATTAT+TGG + chr4_1:36058314-36058333 None:intergenic 25.0%
! GAATACAACCACTTATAATA+TGG - chr4_1:36058326-36058345 Msa0545600:intron 25.0%
! ATACAACCACTTATAATATG+GGG - chr4_1:36058328-36058347 Msa0545600:intron 25.0%
! ATAATACCCCATATTATAAG+TGG + chr4_1:36058337-36058356 None:intergenic 25.0%
! TTGCTTATTATAGTTACCAT+TGG - chr4_1:36059380-36059399 Msa0545600:intron 25.0%
!!! CTTGCTTTAGTTATTTTTTG+TGG + chr4_1:36059453-36059472 None:intergenic 25.0%
!! TATTTTCTCATTACTTACGT+GGG + chr4_1:36059527-36059546 None:intergenic 25.0%
!! TTATTTTCTCATTACTTACG+TGG + chr4_1:36059528-36059547 None:intergenic 25.0%
!!! AATGAATGTGATGGTTTTTT+CGG + chr4_1:36059655-36059674 None:intergenic 25.0%
! TATGTTATGAATGAATGTGA+TGG + chr4_1:36059664-36059683 None:intergenic 25.0%
! TTAAGTATCAATGTTGTGTT+CGG - chr4_1:36060208-36060227 Msa0545600:intron 25.0%
!! TGATTTTCTCACAATATTAG+TGG + chr4_1:36060277-36060296 None:intergenic 25.0%
!!! TTCCATTCCAGTTTTATAAA+CGG + chr4_1:36060652-36060671 None:intergenic 25.0%
! CCATAAAAGTTTACAAAGAA+TGG + chr4_1:36060681-36060700 None:intergenic 25.0%
!! CCATTCTTTGTAAACTTTTA+TGG - chr4_1:36060678-36060697 Msa0545600:intron 25.0%
!! TTATAAGTGGAGTTCTTTTA+TGG - chr4_1:36061225-36061244 Msa0545600:intron 25.0%
! AAAGAATACTTGTGGATATT+AGG - chr4_1:36061333-36061352 Msa0545600:intron 25.0%
! AAGAATACTTGTGGATATTA+GGG - chr4_1:36061334-36061353 Msa0545600:intron 25.0%
!!! GCAATAGTTTTAACTTTCAA+GGG + chr4_1:36062034-36062053 None:intergenic 25.0%
!!! AGCAATAGTTTTAACTTTCA+AGG + chr4_1:36062035-36062054 None:intergenic 25.0%
! TGAAAGTTAAAACTATTGCT+TGG - chr4_1:36062035-36062054 Msa0545600:CDS 25.0%
! GAAAGTTAAAACTATTGCTT+GGG - chr4_1:36062036-36062055 Msa0545600:CDS 25.0%
! AAAGTTAAAACTATTGCTTG+GGG - chr4_1:36062037-36062056 Msa0545600:CDS 25.0%
!!! TTTCTGGAACAATTTATGAA+TGG + chr4_1:36062263-36062282 None:intergenic 25.0%
ATATTGGAATTCGTTGTTGA+TGG + chr4_1:36057577-36057596 None:intergenic 30.0%
ATGTTCAAGATCAATTGAAG+CGG + chr4_1:36057672-36057691 None:intergenic 30.0%
!! TTTTTCGCCTTATTAGAACT+TGG + chr4_1:36057713-36057732 None:intergenic 30.0%
! ACACACTTTTACTTCAAACA+TGG - chr4_1:36057765-36057784 Msa0545600:three_prime_UTR 30.0%
TACTAACACGTGTATTCAAT+CGG + chr4_1:36057928-36057947 None:intergenic 30.0%
GGATTTATACACAAGATACA+AGG - chr4_1:36058029-36058048 Msa0545600:CDS 30.0%
!! AAATCTTTGTTGTTCATGCA+TGG - chr4_1:36058056-36058075 Msa0545600:CDS 30.0%
AAAGATGAACCAAAATGGAA+GGG - chr4_1:36058088-36058107 Msa0545600:CDS 30.0%
! TTCTTTTTGAATGAACACGT+TGG + chr4_1:36058179-36058198 None:intergenic 30.0%
!!! TTGTTCATGCATGCTTTTTT+TGG - chr4_1:36058211-36058230 Msa0545600:CDS 30.0%
TAAAATGTTGAAAGACACGT+TGG + chr4_1:36058278-36058297 None:intergenic 30.0%
! GTGTCTTTCAACATTTTAGA+AGG - chr4_1:36058280-36058299 Msa0545600:CDS 30.0%
! CTGATGTTATTTATCCTGAA+TGG - chr4_1:36058361-36058380 Msa0545600:intron 30.0%
! TAATTGTCTCTTTTCTCCTT+GGG + chr4_1:36058415-36058434 None:intergenic 30.0%
! ATAATTGTCTCTTTTCTCCT+TGG + chr4_1:36058416-36058435 None:intergenic 30.0%
! ATGCATGTTTCTAAAAAGTG+AGG + chr4_1:36058687-36058706 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_1:36059090-36059109 None:intergenic 30.0%
TTCCTTTATCTATGTGCAAA+TGG + chr4_1:36059116-36059135 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - chr4_1:36059220-36059239 Msa0545600:intron 30.0%
! AGCAAGATTAGTTCTTTCAT+TGG - chr4_1:36059471-36059490 Msa0545600:intron 30.0%
TGGAGATGCTCTTAAAAATT+AGG - chr4_1:36059491-36059510 Msa0545600:intron 30.0%
GGAGATGCTCTTAAAAATTA+GGG - chr4_1:36059492-36059511 Msa0545600:intron 30.0%
AAAAAAGTGAATTAAGGGGT+TGG - chr4_1:36059555-36059574 Msa0545600:intron 30.0%
!! AACAACAACCAAGTTGATTA+AGG + chr4_1:36059902-36059921 None:intergenic 30.0%
ACAACTAAAGTTTGTATCTC+TGG + chr4_1:36060066-36060085 None:intergenic 30.0%
GTTTGTCTTTGGATTGATTA+TGG - chr4_1:36060414-36060433 Msa0545600:intron 30.0%
!!! GCTTTGTTTTGACTTCAATT+AGG - chr4_1:36060511-36060530 Msa0545600:intron 30.0%
!!! TATAAACGGCTCTTGTTTTA+TGG + chr4_1:36060638-36060657 None:intergenic 30.0%
AATAAATGCCTAGACTTAAC+CGG - chr4_1:36060977-36060996 Msa0545600:intron 30.0%
! CTCTGAAAAATAACAGTACA+TGG + chr4_1:36061017-36061036 None:intergenic 30.0%
GTGTAAACTATTTAGCACTT+GGG - chr4_1:36061051-36061070 Msa0545600:intron 30.0%
TGTAAACTATTTAGCACTTG+GGG - chr4_1:36061052-36061071 Msa0545600:intron 30.0%
GTCAAGTTAAAGAATACTTG+TGG - chr4_1:36061325-36061344 Msa0545600:intron 30.0%
CCAAGAGTTCAAAATTATGA+TGG + chr4_1:36061389-36061408 None:intergenic 30.0%
! CCATCATAATTTTGAACTCT+TGG - chr4_1:36061386-36061405 Msa0545600:intron 30.0%
!!! ATTTTTTTCCTTCCTACAGA+AGG - chr4_1:36061422-36061441 Msa0545600:intron 30.0%
AAATAACAATAGCCTTCTGT+AGG + chr4_1:36061437-36061456 None:intergenic 30.0%
!! ATTTATTTTCAGGGTGATCA+TGG - chr4_1:36061533-36061552 Msa0545600:intron 30.0%
TTCATATAGAACAACTGCAA+TGG - chr4_1:36061704-36061723 Msa0545600:intron 30.0%
! AACTCATTTTCTTTTCCATC+TGG + chr4_1:36061756-36061775 None:intergenic 30.0%
! ATCTAAGATGTAAACATCGT+CGG + chr4_1:36061787-36061806 None:intergenic 30.0%
CTTGGATGATAATCAACTTA+AGG - chr4_1:36061917-36061936 Msa0545600:CDS 30.0%
GATGATAATCAACTTAAGGA+TGG - chr4_1:36061921-36061940 Msa0545600:CDS 30.0%
AGTTTCAATTATGCAATCTG+CGG + chr4_1:36061976-36061995 None:intergenic 30.0%
TTGCATAATTGAAACTCACA+AGG - chr4_1:36061980-36061999 Msa0545600:CDS 30.0%
ATAATTGAAACTCACAAGGA+AGG - chr4_1:36061984-36062003 Msa0545600:CDS 30.0%
!!! TGATGTCATTTTAGTCTTGA+AGG - chr4_1:36062227-36062246 Msa0545600:CDS 30.0%
TAGAGATGTGTATTGTTGAA+TGG + chr4_1:36062304-36062323 None:intergenic 30.0%
CTCTATCTTGATATATGCAT+TGG - chr4_1:36062319-36062338 Msa0545600:CDS 30.0%
CCAATTTGATTGGAGAATTG+TGG + chr4_1:36057632-36057651 None:intergenic 35.0%
CCACAATTCTCCAATCAAAT+TGG - chr4_1:36057629-36057648 Msa0545600:three_prime_UTR 35.0%
! TGAAGGACCAAGTTCTAATA+AGG - chr4_1:36057703-36057722 Msa0545600:three_prime_UTR 35.0%
! AACTCGTGCAAGTTTTTCTA+TGG - chr4_1:36057736-36057755 Msa0545600:three_prime_UTR 35.0%
! TTTTCGAAGGATCCAATTGT+GGG - chr4_1:36057794-36057813 Msa0545600:three_prime_UTR 35.0%
! ACCAAAAAGCTGAAGGTTTT+TGG - chr4_1:36057822-36057841 Msa0545600:three_prime_UTR 35.0%
! ACCAAAAACCTTCAGCTTTT+TGG + chr4_1:36057826-36057845 None:intergenic 35.0%
TCAACTTCCAAAGAAGGAAT+CGG - chr4_1:36057880-36057899 Msa0545600:CDS 35.0%
GAATCGGGTCAATTAAAATC+TGG - chr4_1:36057896-36057915 Msa0545600:CDS 35.0%
TACACGTGTTAGTAAGTTTG+TGG - chr4_1:36057934-36057953 Msa0545600:CDS 35.0%
ACACGTGTTAGTAAGTTTGT+GGG - chr4_1:36057935-36057954 Msa0545600:CDS 35.0%
GAAAGATGAACCAAAATGGA+AGG - chr4_1:36058087-36058106 Msa0545600:CDS 35.0%
ACAAAGGTTTCTACTAGTGA+AGG - chr4_1:36058139-36058158 Msa0545600:CDS 35.0%
CAAAGGTTTCTACTAGTGAA+GGG - chr4_1:36058140-36058159 Msa0545600:CDS 35.0%
! AAAAGCATGCATGAACAACA+AGG + chr4_1:36058209-36058228 None:intergenic 35.0%
TTGACAAATGTAGTCCATTC+AGG + chr4_1:36058378-36058397 None:intergenic 35.0%
! AATTGTCTCTTTTCTCCTTG+GGG + chr4_1:36058414-36058433 None:intergenic 35.0%
ATTTGCCAAACGACAAGAAT+CGG - chr4_1:36058434-36058453 Msa0545600:intron 35.0%
AGAATCGGTAAGAAAAGATG+TGG - chr4_1:36058449-36058468 Msa0545600:intron 35.0%
GATTACGATCATGTCGATAA+TGG - chr4_1:36058627-36058646 Msa0545600:intron 35.0%
! GTTTCTAAAAAGTGAGGATG+AGG + chr4_1:36058681-36058700 None:intergenic 35.0%
GAGCATATTTGGAAACGTTT+CGG - chr4_1:36058768-36058787 Msa0545600:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr4_1:36059325-36059344 Msa0545600:intron 35.0%
ACTCATTGAGATTTGCGTAA+AGG - chr4_1:36059409-36059428 Msa0545600:intron 35.0%
CTCTTAAAAATTAGGGCCAA+AGG - chr4_1:36059499-36059518 Msa0545600:intron 35.0%
! AATCTGTGGGTTATATGGTT+TGG - chr4_1:36059601-36059620 Msa0545600:intron 35.0%
ATCAAACCTTGATCTTGATC+AGG - chr4_1:36059833-36059852 Msa0545600:intron 35.0%
TCAAACCTTGATCTTGATCA+GGG - chr4_1:36059834-36059853 Msa0545600:intron 35.0%
ATAAACCCTGATCAAGATCA+AGG + chr4_1:36059842-36059861 None:intergenic 35.0%
!! AACCTCTTTGATTTTGGTGT+TGG - chr4_1:36059961-36059980 Msa0545600:intron 35.0%
!!! ACCTCTTTGATTTTGGTGTT+GGG - chr4_1:36059962-36059981 Msa0545600:intron 35.0%
TCTCACAATATTAGTGGTGT+GGG + chr4_1:36060271-36060290 None:intergenic 35.0%
TTCTCACAATATTAGTGGTG+TGG + chr4_1:36060272-36060291 None:intergenic 35.0%
TTCAGTGTAATCACATGTGT+CGG - chr4_1:36060302-36060321 Msa0545600:intron 35.0%
GGTGTTTCAAAGTTTGTCTT+TGG - chr4_1:36060403-36060422 Msa0545600:intron 35.0%
!! TCAGCTTTGAACACAAAATG+TGG - chr4_1:36060459-36060478 Msa0545600:intron 35.0%
AAATGTGGTAATTCCTGTGT+TGG - chr4_1:36060474-36060493 Msa0545600:intron 35.0%
AATGTGGTAATTCCTGTGTT+GGG - chr4_1:36060475-36060494 Msa0545600:intron 35.0%
CATTATGAGAAGAAGCAAGA+TGG + chr4_1:36060613-36060632 None:intergenic 35.0%
ACAAGAGCCGTTTATAAAAC+TGG - chr4_1:36060642-36060661 Msa0545600:intron 35.0%
AGCCGTTTATAAAACTGGAA+TGG - chr4_1:36060647-36060666 Msa0545600:intron 35.0%
TTTAAAGACAAAAGGTCGAG+AGG - chr4_1:36060910-36060929 Msa0545600:intron 35.0%
! TTTTCAGAGCTGATATCGTA+AGG - chr4_1:36061028-36061047 Msa0545600:intron 35.0%
TTTCAGAGCTGATATCGTAA+GGG - chr4_1:36061029-36061048 Msa0545600:intron 35.0%
GGTGTAAACTATTTAGCACT+TGG - chr4_1:36061050-36061069 Msa0545600:intron 35.0%
!! AGCTATAAAGAGAGTTGGTA+TGG + chr4_1:36061252-36061271 None:intergenic 35.0%
! AGGTTAGCTATAAAGAGAGT+TGG + chr4_1:36061257-36061276 None:intergenic 35.0%
CTCTTTATAGCTAACCTGAT+AGG - chr4_1:36061260-36061279 Msa0545600:intron 35.0%
ATAGCTAACCTGATAGGTTT+AGG - chr4_1:36061266-36061285 Msa0545600:intron 35.0%
ATCTTATGCCTAAACCTATC+AGG + chr4_1:36061277-36061296 None:intergenic 35.0%
TGCATAAAACTGACATTGCT+AGG + chr4_1:36061474-36061493 None:intergenic 35.0%
TAGCAATGGTTGATTGATTG+CGG + chr4_1:36061611-36061630 None:intergenic 35.0%
!! AAGAGTGTTTCCAAATCTTG+TGG - chr4_1:36061666-36061685 Msa0545600:intron 35.0%
! TCTAAGATGTAAACATCGTC+GGG + chr4_1:36061786-36061805 None:intergenic 35.0%
GAACTCTACTGAGAAATGTT+GGG - chr4_1:36062008-36062027 Msa0545600:CDS 35.0%
! TTGGAATTCGTTGTTGATGG+TGG + chr4_1:36057574-36057593 None:intergenic 40.0%
CGAATTCCAATATGTGACAG+CGG - chr4_1:36057584-36057603 Msa0545600:three_prime_UTR 40.0%
TGGTTCTCGACCAATTTGAT+TGG + chr4_1:36057642-36057661 None:intergenic 40.0%
GAACATATTACGCTCGATGA+AGG - chr4_1:36057686-36057705 Msa0545600:three_prime_UTR 40.0%
! AACATGGCTCAACTTTTCGA+AGG - chr4_1:36057781-36057800 Msa0545600:three_prime_UTR 40.0%
! CTTTTCGAAGGATCCAATTG+TGG - chr4_1:36057793-36057812 Msa0545600:three_prime_UTR 40.0%
! TTTTGGTCAACTCCCACAAT+TGG + chr4_1:36057809-36057828 None:intergenic 40.0%
! CCTTCTTTGGAAGTTGATTG+CGG + chr4_1:36057877-36057896 None:intergenic 40.0%
CAACTTCCAAAGAAGGAATC+GGG - chr4_1:36057881-36057900 Msa0545600:CDS 40.0%
AATTGACCCGATTCCTTCTT+TGG + chr4_1:36057890-36057909 None:intergenic 40.0%
TGAGGATGATAGAATGACTG+AGG - chr4_1:36058000-36058019 Msa0545600:CDS 40.0%
ATAGAATGACTGAGGCACAT+AGG - chr4_1:36058008-36058027 Msa0545600:CDS 40.0%
!! TCTTTGTTGTTCATGCATGG+CGG - chr4_1:36058059-36058078 Msa0545600:CDS 40.0%
! ATTGCTTCTCCCTTCCATTT+TGG + chr4_1:36058100-36058119 None:intergenic 40.0%
!!! GCATGCTTTTTTTGGTACTC+CGG - chr4_1:36058219-36058238 Msa0545600:CDS 40.0%
!!! CATGCTTTTTTTGGTACTCC+GGG - chr4_1:36058220-36058239 Msa0545600:CDS 40.0%
!! TCTTACCGATTCTTGTCGTT+TGG + chr4_1:36058442-36058461 None:intergenic 40.0%
AAAGATGTGGAACGAGCATT+TGG - chr4_1:36058462-36058481 Msa0545600:intron 40.0%
TCTCGATTCACAATTGTACG+CGG - chr4_1:36058495-36058514 Msa0545600:intron 40.0%
CCAAATATGCTCCACCAAAT+CGG + chr4_1:36058760-36058779 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:36059329-36059348 None:intergenic 40.0%
CGCCATTTGCACATAGATAA+AGG - chr4_1:36059111-36059130 Msa0545600:intron 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG - chr4_1:36059226-36059245 Msa0545600:intron 40.0%
AAAGTTGGAGAGGGTAAAGT+TGG - chr4_1:36059235-36059254 Msa0545600:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:36059329-36059348 Msa0545600:intron 40.0%
! ACGGAGGGAGTATAAATTTG+TGG - chr4_1:36059344-36059363 Msa0545600:intron 40.0%
! CGGAGGGAGTATAAATTTGT+GGG - chr4_1:36059345-36059364 Msa0545600:intron 40.0%
! GGAGGGAGTATAAATTTGTG+GGG - chr4_1:36059346-36059365 Msa0545600:intron 40.0%
CTCAATGAGTTCTACTCCAA+TGG + chr4_1:36059399-36059418 None:intergenic 40.0%
AGATTTGCGTAAAGGCAATG+TGG - chr4_1:36059417-36059436 Msa0545600:intron 40.0%
GTAAAGGCAATGTGGCAATT+TGG - chr4_1:36059425-36059444 Msa0545600:intron 40.0%
AAAGTGAATTAAGGGGTTGG+TGG - chr4_1:36059558-36059577 Msa0545600:intron 40.0%
! AAGTGAATTAAGGGGTTGGT+GGG - chr4_1:36059559-36059578 Msa0545600:intron 40.0%
!!! GTGATGGTTTTTTCGGAGTT+GGG + chr4_1:36059648-36059667 None:intergenic 40.0%
!!! TGTGATGGTTTTTTCGGAGT+TGG + chr4_1:36059649-36059668 None:intergenic 40.0%
!!! CCTCTTTGATTTTGGTGTTG+GGG - chr4_1:36059963-36059982 Msa0545600:intron 40.0%
!!! CTCTTTGATTTTGGTGTTGG+GGG - chr4_1:36059964-36059983 Msa0545600:intron 40.0%
!!! ATTTTGGTGTTGGGGGTTTT+AGG - chr4_1:36059971-36059990 Msa0545600:intron 40.0%
AGACACAGCTTCAATGTATG+TGG + chr4_1:36060114-36060133 None:intergenic 40.0%
ACATACATTGAAGCTGTGTC+TGG - chr4_1:36060113-36060132 Msa0545600:intron 40.0%
TATCAAGCACACACACTTCT+CGG + chr4_1:36060369-36060388 None:intergenic 40.0%
! AGAAGTGTGTGTGCTTGATA+GGG - chr4_1:36060369-36060388 Msa0545600:intron 40.0%
TTCAGAGTGAGCGTTATAAG+TGG - chr4_1:36061212-36061231 Msa0545600:intron 40.0%
AACAATAGCCTTCTGTAGGA+AGG + chr4_1:36061433-36061452 None:intergenic 40.0%
AGTTTGAATCATGCATAGCG+GGG + chr4_1:36061583-36061602 None:intergenic 40.0%
CAGTTTGAATCATGCATAGC+GGG + chr4_1:36061584-36061603 None:intergenic 40.0%
GCAGTTTGAATCATGCATAG+CGG + chr4_1:36061585-36061604 None:intergenic 40.0%
TTGTAGACCCGAAAGATGAA+GGG + chr4_1:36061647-36061666 None:intergenic 40.0%
TTTGTAGACCCGAAAGATGA+AGG + chr4_1:36061648-36061667 None:intergenic 40.0%
TGACTTCAAGCCACAAGATT+TGG + chr4_1:36061679-36061698 None:intergenic 40.0%
GCTTACAAGGTCAAGCTTAT+TGG - chr4_1:36061729-36061748 Msa0545600:CDS 40.0%
TAAGATGTAAACATCGTCGG+GGG + chr4_1:36061784-36061803 None:intergenic 40.0%
CTAAGATGTAAACATCGTCG+GGG + chr4_1:36061785-36061804 None:intergenic 40.0%
TGAATAAGGGAGTTCAACTC+CGG + chr4_1:36061823-36061842 None:intergenic 40.0%
AACAATCTTTCCAGCACAAG+TGG + chr4_1:36061865-36061884 None:intergenic 40.0%
TGTGCTGGAAAGATTGTTTC+TGG - chr4_1:36061867-36061886 Msa0545600:CDS 40.0%
!! TGGAAAGATTGTTTCTGGCT+CGG - chr4_1:36061872-36061891 Msa0545600:CDS 40.0%
TCAATCTGATGGCTCTTTCT+TGG - chr4_1:36061899-36061918 Msa0545600:CDS 40.0%
TCAATTATGCAATCTGCGGT+TGG + chr4_1:36061972-36061991 None:intergenic 40.0%
CGAACTCTACTGAGAAATGT+TGG - chr4_1:36062007-36062026 Msa0545600:CDS 40.0%
! GGGGAAACTGAGAGTTTTTA+AGG - chr4_1:36062056-36062075 Msa0545600:CDS 40.0%
! GGTAGATTTTGCAGCTGATT+TGG - chr4_1:36062077-36062096 Msa0545600:CDS 40.0%
!! GAATTCGTTGTTGATGGTGG+TGG + chr4_1:36057571-36057590 None:intergenic 45.0%
TCAATTGAAGCGGAGAGTTG+TGG + chr4_1:36057662-36057681 None:intergenic 45.0%
GGAGTTGACCAAAAAGCTGA+AGG - chr4_1:36057815-36057834 Msa0545600:three_prime_UTR 45.0%
! CTTTGGAAGTTGATTGCGGT+AGG + chr4_1:36057873-36057892 None:intergenic 45.0%
CCGCAATCAACTTCCAAAGA+AGG - chr4_1:36057874-36057893 Msa0545600:CDS 45.0%
AAACAAAAGTGGTCGCTCTG+AGG - chr4_1:36057982-36058001 Msa0545600:CDS 45.0%
!! TCTTTTCTCCTTGGGGCATT+GGG + chr4_1:36058407-36058426 None:intergenic 45.0%
GACGAACGTGACACATATGA+TGG - chr4_1:36058597-36058616 Msa0545600:intron 45.0%
TCGTCAACTTCAAGCCGATT+TGG - chr4_1:36058743-36058762 Msa0545600:intron 45.0%
!! TCAACTTCAAGCCGATTTGG+TGG - chr4_1:36058746-36058765 Msa0545600:intron 45.0%
!! CCGATTTGGTGGAGCATATT+TGG - chr4_1:36058757-36058776 Msa0545600:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:36059328-36059347 None:intergenic 45.0%
GTGTGAGAGAAAAGTTGGAG+AGG - chr4_1:36059225-36059244 Msa0545600:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_1:36059328-36059347 Msa0545600:intron 45.0%
ATTACTTACGTGGGTGCCTT+TGG + chr4_1:36059518-36059537 None:intergenic 45.0%
!! AATTAAGGGGTTGGTGGGTT+TGG - chr4_1:36059564-36059583 Msa0545600:intron 45.0%
!! ATTAAGGGGTTGGTGGGTTT+GGG - chr4_1:36059565-36059584 Msa0545600:intron 45.0%
! GAGCGAATCTGTGGGTTATA+TGG - chr4_1:36059596-36059615 Msa0545600:intron 45.0%
AGAGAAGAGAAGAGGAGAAG+GGG + chr4_1:36059723-36059742 None:intergenic 45.0%
CAGAGAAGAGAAGAGGAGAA+GGG + chr4_1:36059724-36059743 None:intergenic 45.0%
ACAGAGAAGAGAAGAGGAGA+AGG + chr4_1:36059725-36059744 None:intergenic 45.0%
GAGCTTACAGAGAAGAGAAG+AGG + chr4_1:36059731-36059750 None:intergenic 45.0%
CCCCAACACCAAAATCAAAG+AGG + chr4_1:36059966-36059985 None:intergenic 45.0%
CTACATGTGTCATGTCGTGT+TGG + chr4_1:36060159-36060178 None:intergenic 45.0%
! GTAATCACATGTGTCGGTGT+TGG - chr4_1:36060308-36060327 Msa0545600:intron 45.0%
GATTAGGCATGTCCATGTGT+CGG + chr4_1:36060347-36060366 None:intergenic 45.0%
! GAGAAGTGTGTGTGCTTGAT+AGG - chr4_1:36060368-36060387 Msa0545600:intron 45.0%
GAAGTGTGTGTGCTTGATAG+GGG - chr4_1:36060370-36060389 Msa0545600:intron 45.0%
AAGTGTGTGTGCTTGATAGG+GGG - chr4_1:36060371-36060390 Msa0545600:intron 45.0%
CTATATGAGTGACCCAACAC+AGG + chr4_1:36060490-36060509 None:intergenic 45.0%
ACCTTCAACCATCATCTGCT+TGG + chr4_1:36060873-36060892 None:intergenic 45.0%
! CTACAATGCCGGTTAAGTCT+AGG + chr4_1:36060988-36061007 None:intergenic 45.0%
CTAGACTTAACCGGCATTGT+AGG - chr4_1:36060986-36061005 Msa0545600:intron 45.0%
CATGGCTATTCCTACAATGC+CGG + chr4_1:36060999-36061018 None:intergenic 45.0%
!! CACTCTGAAATCACTGCTAG+AGG + chr4_1:36061201-36061220 None:intergenic 45.0%
GGAAACATTCACAGCTGACA+AGG + chr4_1:36061562-36061581 None:intergenic 45.0%
GCGAAGTTCCCTTCATCTTT+CGG - chr4_1:36061636-36061655 Msa0545600:intron 45.0%
CGAAGTTCCCTTCATCTTTC+GGG - chr4_1:36061637-36061656 Msa0545600:intron 45.0%
AACTGCAATGGCTGCTTACA+AGG - chr4_1:36061716-36061735 Msa0545600:intron 45.0%
GTCAAGCTTATTGGACCAGA+TGG - chr4_1:36061738-36061757 Msa0545600:CDS 45.0%
TTAGATGCAGCAGAAGATGC+CGG - chr4_1:36061801-36061820 Msa0545600:CDS 45.0%
!! AAAGATTGTTTCTGGCTCGG+TGG - chr4_1:36061875-36061894 Msa0545600:CDS 45.0%
TATGCAATCTGCGGTTGGAT+AGG + chr4_1:36061967-36061986 None:intergenic 45.0%
!! AATAAATAAATATTATAAAG+TGG + chr4_1:36061520-36061539 None:intergenic 5.0%
!!! TATAATATTTATTTATTTTC+AGG - chr4_1:36061523-36061542 Msa0545600:intron 5.0%
!!! ATAATATTTATTTATTTTCA+GGG - chr4_1:36061524-36061543 Msa0545600:intron 5.0%
TCCAATATGTGACAGCGGTG+TGG - chr4_1:36057589-36057608 Msa0545600:three_prime_UTR 50.0%
TCCACACCGCTGTCACATAT+TGG + chr4_1:36057593-36057612 None:intergenic 50.0%
AAAACCATCCCAATGCCCCA+AGG - chr4_1:36058396-36058415 Msa0545600:intron 50.0%
! CTCTTTTCTCCTTGGGGCAT+TGG + chr4_1:36058408-36058427 None:intergenic 50.0%
TTCACGTGCCAAGAACGTGA+TGG + chr4_1:36058522-36058541 None:intergenic 50.0%
!! GAAGGGGAAGATGATGGAAG+CGG + chr4_1:36059707-36059726 None:intergenic 50.0%
AGAGGAGAAGGGGAAGATGA+TGG + chr4_1:36059713-36059732 None:intergenic 50.0%
GCACACACACTTCTCGGATT+AGG + chr4_1:36060363-36060382 None:intergenic 50.0%
CTTGATAGGGGGCAATTGAG+TGG - chr4_1:36060382-36060401 Msa0545600:intron 50.0%
AATCTGGCTGACCACTAGAG+GGG + chr4_1:36060539-36060558 None:intergenic 50.0%
CAATCTGGCTGACCACTAGA+GGG + chr4_1:36060540-36060559 None:intergenic 50.0%
AGCTCTTTGCTCTTCACTCG+TGG + chr4_1:36060589-36060608 None:intergenic 50.0%
GGCTTGCAGATGACAATGGT+AGG + chr4_1:36060840-36060859 None:intergenic 50.0%
ACAGGGCTTGCAGATGACAA+TGG + chr4_1:36060844-36060863 None:intergenic 50.0%
TCATCTGCAAGCCCTGTCAA+CGG - chr4_1:36060847-36060866 Msa0545600:intron 50.0%
! GCCAAGCAGATGATGGTTGA+AGG - chr4_1:36060869-36060888 Msa0545600:intron 50.0%
GAACTTCGCTGTGGTAGCAA+TGG + chr4_1:36061625-36061644 None:intergenic 50.0%
AGATGAAGGGAACTTCGCTG+TGG + chr4_1:36061634-36061653 None:intergenic 50.0%
CTCCAGCACGGCATGAATAA+GGG + chr4_1:36061836-36061855 None:intergenic 50.0%
TGCGGTTGGATAGGAAACAC+AGG + chr4_1:36061958-36061977 None:intergenic 50.0%
!! TTCTCCTTGGGGCATTGGGA+TGG + chr4_1:36058403-36058422 None:intergenic 55.0%
TACGCGGTCCATCACGTTCT+TGG - chr4_1:36058511-36058530 Msa0545600:intron 55.0%
CGGCGAAAGAGCGAATCTGT+GGG - chr4_1:36059588-36059607 Msa0545600:intron 55.0%
TCAATTAGGCCCCCCTCTAG+TGG - chr4_1:36060525-36060544 Msa0545600:intron 55.0%
ATCTGGCTGACCACTAGAGG+GGG + chr4_1:36060538-36060557 None:intergenic 55.0%
GCAATCTGGCTGACCACTAG+AGG + chr4_1:36060541-36060560 None:intergenic 55.0%
ACTAATCCGGGGGAGCAATC+TGG + chr4_1:36060555-36060574 None:intergenic 55.0%
!! GATTGCTCCCCCGGATTAGT+CGG - chr4_1:36060555-36060574 Msa0545600:intron 55.0%
TCCAAGACCGACTAATCCGG+GGG + chr4_1:36060565-36060584 None:intergenic 55.0%
CTCCAAGACCGACTAATCCG+GGG + chr4_1:36060566-36060585 None:intergenic 55.0%
GCTCCAAGACCGACTAATCC+GGG + chr4_1:36060567-36060586 None:intergenic 55.0%
GGCTCCAAGACCGACTAATC+CGG + chr4_1:36060568-36060587 None:intergenic 55.0%
CATCTGCTTGGCCGTTGACA+GGG + chr4_1:36060861-36060880 None:intergenic 55.0%
TCATCTGCTTGGCCGTTGAC+AGG + chr4_1:36060862-36060881 None:intergenic 55.0%
GTCAACGGCCAAGCAGATGA+TGG - chr4_1:36060862-36060881 Msa0545600:intron 55.0%
CTCCCTTATTCATGCCGTGC+TGG - chr4_1:36061831-36061850 Msa0545600:CDS 55.0%
GCTCCAGCACGGCATGAATA+AGG + chr4_1:36061837-36061856 None:intergenic 55.0%
AAGTGGAGCAAGCTCCAGCA+CGG + chr4_1:36061848-36061867 None:intergenic 55.0%
!! GGCTCGGTGGATCAATCTGA+TGG - chr4_1:36061888-36061907 Msa0545600:CDS 55.0%
!! AAGGGGTTGGTGGGTTTGGG+CGG - chr4_1:36059568-36059587 Msa0545600:intron 60.0%
GCGGCGAAAGAGCGAATCTG+TGG - chr4_1:36059587-36059606 Msa0545600:intron 60.0%
CACGACACGTGTCCGACACA+TGG - chr4_1:36060332-36060351 Msa0545600:intron 60.0%
TCTGGCTGACCACTAGAGGG+GGG + chr4_1:36060537-36060556 None:intergenic 60.0%
!! TCCCCCGGATTAGTCGGTCT+TGG - chr4_1:36060561-36060580 Msa0545600:intron 60.0%
! GGAGCTTGCTCCACTTGTGC+TGG - chr4_1:36061852-36061871 Msa0545600:CDS 60.0%
GGTCAGCCAGATTGCTCCCC+CGG - chr4_1:36060546-36060565 Msa0545600:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 36057530 36062348 36057530 ID=Msa0545600;Name=Msa0545600
chr4_1 mRNA 36057530 36062348 36057530 ID=Msa0545600-mRNA-1;Parent=Msa0545600;Name=Msa0545600-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0.5|1|1|1|2|329|368
chr4_1 exon 36057530 36058333 36057530 ID=Msa0545600-mRNA-1:exon:9139;Parent=Msa0545600-mRNA-1
chr4_1 exon 36061717 36062348 36061717 ID=Msa0545600-mRNA-1:exon:9138;Parent=Msa0545600-mRNA-1
chr4_1 CDS 36061717 36062348 36061717 ID=Msa0545600-mRNA-1:cds;Parent=Msa0545600-mRNA-1
chr4_1 CDS 36057859 36058333 36057859 ID=Msa0545600-mRNA-1:cds;Parent=Msa0545600-mRNA-1
chr4_1 three_prime_UTR 36057530 36057858 36057530 ID=Msa0545600-mRNA-1:three_prime_utr;Parent=Msa0545600-mRNA-1
Gene Sequence

>Msa0545600

TTGGTGACACTTCTCAAAATCCCCAATATTATTTTTATCCACCACCATCAACAACGAATTCCAATATGTGACAGCGGTGTGGAGTCTTGTAATGTTGTGCCACAATTCTCCAATCAAATTGGTCGAGAACCACAACTCTCCGCTTCAATTGATCTTGAACATATTACGCTCGATGAAGGACCAAGTTCTAATAAGGCGAAAAAACAAACTCGTGCAAGTTTTTCTATGGAAGAAGACACACTTTTACTTCAAACATGGCTCAACTTTTCGAAGGATCCAATTGTGGGAGTTGACCAAAAAGCTGAAGGTTTTTGGTTAAGAATCAAAGACAACTACAAAACCTACCGCAATCAACTTCCAAAGAAGGAATCGGGTCAATTAAAATCTGGATATCACCGATTGAATACACGTGTTAGTAAGTTTGTGGGCTGCTACAAAGCAGTAGTTAATCAAAACAAAAGTGGTCGCTCTGAGGATGATAGAATGACTGAGGCACATAGGATTTATACACAAGATACAAGGAAAAAAATCTTTGTTGTTCATGCATGGCGGATATTGAAAGATGAACCAAAATGGAAGGGAGAAGCAATCGAAAACTCTTCAAAAAGAACAAAGGTTTCTACTAGTGAAGGGGTGATCATGGCATCCTTGTCAGCTGTGAATGTTTCCCCGCTATGCATGATTCAAACTGCAAACCGCAATCAATCAACCATTGCTACCACAGCGAAGTTCCCTTCATCTTTCGGGTCTACAAAGAGTGTTTCCAAATCTTGTGGCTTGAAGTCATCATCTTCATATAGAACAACTGCAATGGCTGCTTACAAGGTCAAGCTTATTGGACCAGATGGAAAAGAAAATGAGTTTGACGCCCCCGACGATGTTTACATCTTAGATGCAGCAGAAGATGCCGGAGTTGAACTCCCTTATTCATGCCGTGCTGGAGCTTGCTCCACTTGTGCTGGAAAGATTGTTTCTGGCTCGGTGGATCAATCTGATGGCTCTTTCTTGGATGATAATCAACTTAAGGATGGCTTTGTGCTTACCTGTGTTTCCTATCCAACCGCAGATTGCATAATTGAAACTCACAAGGAAGGCGAACTCTACTGA
Protein sequence

>Msa0545600

LVTLLKIPNIIFIHHHQQRIPICDSGVESCNVVPQFSNQIGREPQLSASIDLEHITLDEGPSSNKAKKQTRASFSMEEDTLLLQTWLNFSKDPIVGVDQKAEGFWLRIKDNYKTYRNQLPKKESGQLKSGYHRLNTRVSKFVGCYKAVVNQNKSGRSEDDRMTEAHRIYTQDTRKKIFVVHAWRILKDEPKWKGEAIENSSKRTKVSTSEGVIMASLSAVNVSPLCMIQTANRNQSTIATTAKFPSSFGSTKSVSKSCGLKSSSSYRTTAMAAYKVKLIGPDGKENEFDAPDDVYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKDGFVLTCVSYPTADCIIETHKEGELY*