AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0552110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 299 sgRNAs with CRISPR-Local

Find 1953 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGTTTGAAGACACTTTA+AGG 0.153886 4_1:+48581364 Msa0552110:three_prime_UTR
TTACTTTACACTGGCTTTCT+TGG 0.173101 4_1:+48558316 Msa0552110:CDS
GAAATATAAAATTGATAAAA+TGG 0.173636 4_1:+48577534 Msa0552110:three_prime_UTR
TAACACCCAAAGGACATTTA+AGG 0.195845 4_1:+48577767 Msa0552110:three_prime_UTR
TTTATTCATATTATAAAATA+TGG 0.209225 4_1:-48583849 None:intergenic
GCAGCAGCCAGTGGCCTTCT+TGG 0.225465 4_1:+48581620 Msa0552110:three_prime_UTR
GGCTGCTGCTGCATGAGCTT+GGG 0.225768 4_1:-48581606 None:intergenic
CTATGCACTAGTCCCGTTTC+TGG 0.229114 4_1:-48584108 None:intergenic
TGGCTGCTGCTGCATGAGCT+TGG 0.233454 4_1:-48581607 None:intergenic
GTCCACAAATACAAGGTTTC+TGG 0.243519 4_1:+48581959 Msa0552110:three_prime_UTR
ACCTGCAGCTTTGTGGTATT+GGG 0.255251 4_1:+48556504 Msa0552110:five_prime_UTR
TCCTCTTCCACTTCTTAGTT+AGG 0.270309 4_1:-48578591 None:intergenic
ATCAGCTAATCTTATTAAAA+AGG 0.273394 4_1:+48558373 Msa0552110:CDS
AATGATGAAGAGAGGTATAT+TGG 0.275395 4_1:+48578817 Msa0552110:three_prime_UTR
ATTACAACTTTCCACAAGTT+TGG 0.291563 4_1:-48583767 None:intergenic
CACCTGCAGCTTTGTGGTAT+TGG 0.297768 4_1:+48556503 Msa0552110:five_prime_UTR
TATGGTTGTAGATTATGTTT+TGG 0.299380 4_1:+48583826 Msa0552110:three_prime_UTR
CCAACCTGAGAGCCACTAAT+TGG 0.304329 4_1:-48558173 None:intergenic
CCAACCTGAGAGCCACTAAT+TGG 0.304329 4_1:-48580971 None:intergenic
AAAATACCATATTATCAAAA+TGG 0.317698 4_1:+48577738 Msa0552110:three_prime_UTR
TCCAGATCACGTGTAGATTA+GGG 0.318358 4_1:-48578771 None:intergenic
AATTATGTAGTTCTGGATCT+AGG 0.323871 4_1:+48554212 Msa0552110:intron
AATTATGTAGTTCTGGATCT+AGG 0.323871 4_1:+48577310 Msa0552110:intron
GGAAATAACCTGCTCAGATC+TGG 0.323943 4_1:+48584503 Msa0552110:intron
CAGAATCTGCTCTTCAATTA+CGG 0.325982 4_1:-48577512 None:intergenic
GCAGAGATGTTGTTTGTATC+AGG 0.328863 4_1:+48554243 Msa0552110:five_prime_UTR
GCAGAGATGTTGTTTGTATC+AGG 0.328863 4_1:+48577341 Msa0552110:three_prime_UTR
GCAGGGATGTTGTTTGTATC+AGG 0.335179 4_1:+48562049 Msa0552110:three_prime_UTR
GCAGGGATGTTGTTTGTATC+AGG 0.335179 4_1:+48576211 Msa0552110:three_prime_UTR
AATTTCCCTTAAATGTCCTT+TGG 0.335703 4_1:-48577773 None:intergenic
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+48553909 Msa0552110:five_prime_UTR
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+48577007 Msa0552110:three_prime_UTR
AGAAAATTATAACATTTATT+CGG 0.351761 4_1:+48553385 Msa0552110:five_prime_UTR
TGGCCATAAGCTAATATCTT+AGG 0.352798 4_1:-48578451 None:intergenic
AAATACCTTCAATGCAATTT+CGG 0.353076 4_1:+48583977 Msa0552110:three_prime_UTR
ACAACAAAATACTTTATTAG+AGG 0.357152 4_1:+48578218 Msa0552110:three_prime_UTR
AGCAGTAACGATGTTCATTC+TGG 0.358583 4_1:+48577623 Msa0552110:three_prime_UTR
ATGTTCAGGAACAAATTATA+AGG 0.359162 4_1:-48584064 None:intergenic
ATTTCCCTTAAATGTCCTTT+GGG 0.361413 4_1:-48577772 None:intergenic
TTCCAGATCACGTGTAGATT+AGG 0.362252 4_1:-48578772 None:intergenic
AACACCCAAAGGACATTTAA+GGG 0.367713 4_1:+48577768 Msa0552110:three_prime_UTR
TAGCCACGTTTACAATGTTC+AGG 0.368088 4_1:-48584078 None:intergenic
TCTCAGTGATCATACTCTTA+AGG 0.369873 4_1:+48558110 Msa0552110:intron
TCTCAGTGATCATACTCTTA+AGG 0.369873 4_1:+48580908 Msa0552110:intron
TTATGAAACTTTAAGAGCTC+TGG 0.370204 4_1:+48581877 Msa0552110:three_prime_UTR
ACAAGTAGCGTTTAAAGAAC+TGG 0.372490 4_1:+48577841 Msa0552110:three_prime_UTR
GACTTAAACCTTGAAAAGTT+GGG 0.373111 4_1:-48577571 None:intergenic
GATATTAGCTTATGGCCATT+TGG 0.374341 4_1:+48578456 Msa0552110:three_prime_UTR
CCAATTTCAAACTGTTCAAA+AGG 0.375714 4_1:+48578620 Msa0552110:three_prime_UTR
GGAACAAATTATAAGGCTTC+CGG 0.375719 4_1:-48584057 None:intergenic
GCACGGGTGTTGTATGTATC+AGG 0.378032 4_1:+48553744 Msa0552110:five_prime_UTR
GCACGGGTGTTGTATGTATC+AGG 0.378032 4_1:+48576842 Msa0552110:three_prime_UTR
CCTCTTCCACTTCTTAGTTA+GGG 0.379752 4_1:-48578590 None:intergenic
GCAGGGGTGTTGTATGTATC+AGG 0.381683 4_1:+48553423 Msa0552110:five_prime_UTR
GCAGGGGTGTTGTATGTATC+AGG 0.381683 4_1:+48576520 Msa0552110:three_prime_UTR
TGACTTAAACCTTGAAAAGT+TGG 0.382203 4_1:-48577572 None:intergenic
TGTTTGGAGACTTCCAGATA+TGG 0.383401 4_1:+48558521 Msa0552110:CDS
TGTTTGGAGACTTCCAGATA+TGG 0.383401 4_1:+48581319 Msa0552110:three_prime_UTR
CTAAGAAGTGGAAGAGGACT+TGG 0.383672 4_1:+48578596 Msa0552110:three_prime_UTR
ATCTCTTCCTCGGACATAGA+AGG 0.384845 4_1:-48581923 None:intergenic
GCAGGGATGTTGTTTGTCTC+AGG 0.388069 4_1:+48554076 Msa0552110:five_prime_UTR
GCAGGGATGTTGTTTGTCTC+AGG 0.388069 4_1:+48577174 Msa0552110:three_prime_UTR
AGGATCGCACTGCTTGTGTT+TGG 0.391046 4_1:+48581303 Msa0552110:intron
ATATATCAAGAACTTAATTT+CGG 0.392563 4_1:+48577891 Msa0552110:three_prime_UTR
ACCCTAATCTACACGTGATC+TGG 0.395785 4_1:+48578770 Msa0552110:three_prime_UTR
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+48554058 Msa0552110:five_prime_UTR
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+48577156 Msa0552110:three_prime_UTR
CGATCTGGTTCTTCAAAAGA+AGG 0.400490 4_1:-48561734 None:intergenic
TAAAAGTTTAAAATTGAAAC+AGG 0.402809 4_1:-48583805 None:intergenic
CGTGTTTGAAGACACTTTAA+GGG 0.403576 4_1:+48581365 Msa0552110:three_prime_UTR
CAGCCTAAGATATTAGCTTA+TGG 0.409580 4_1:+48578448 Msa0552110:three_prime_UTR
CGGCTTGCAAGTGTTATTGA+TGG 0.412359 4_1:-48581671 None:intergenic
CTGCGGCAACAAGGGATTTG+CGG 0.412826 4_1:+48583641 Msa0552110:three_prime_UTR
AGCTCCAATTAGTGGCTCTC+AGG 0.414802 4_1:+48558169 Msa0552110:CDS
AGCTCCAATTAGTGGCTCTC+AGG 0.414802 4_1:+48580967 Msa0552110:three_prime_UTR
TAGCTTGCCCTGCTTGCATC+AGG 0.416212 4_1:+48582713 Msa0552110:three_prime_UTR
TGCTTGGCTGACATCATCAT+GGG 0.416444 4_1:-48556586 Msa0552120:CDS
AATCCCTTGTTGCCGCAGCC+AGG 0.416854 4_1:-48583636 None:intergenic
AACGGTCACCTGCAGCTTTG+TGG 0.416954 4_1:+48556497 Msa0552110:five_prime_UTR
GCAGGGGTGTTGTATGTTAC+AGG 0.417903 4_1:+48576372 Msa0552110:three_prime_UTR
CATCAGATATAGCCCATATC+TGG 0.418485 4_1:-48558534 None:intergenic
CATCAGATATAGCCCATATC+TGG 0.418485 4_1:-48581332 None:intergenic
GTGCGAAATTGCAGACAGAT+TGG 0.419355 4_1:-48561703 None:intergenic
TGCTGTACAGGTTAGGTTGT+TGG 0.423397 4_1:+48557732 Msa0552110:intron
TGCTGTACAGGTTAGGTTGT+TGG 0.423397 4_1:+48580530 Msa0552110:intron
ATGTAGCCTCGAAGCTTTGT+AGG 0.427626 4_1:+48584020 Msa0552110:three_prime_UTR
TGGATCCAGGGACACGATGC+AGG 0.427684 4_1:+48553891 Msa0552110:five_prime_UTR
TGGATCCAGGGACACGATGC+AGG 0.427684 4_1:+48562827 Msa0552110:three_prime_UTR
TGGATCCAGGGACACGATGC+AGG 0.427684 4_1:+48576989 Msa0552110:three_prime_UTR
TGGATCAAGGGACACGATGC+AGG 0.429703 4_1:+48576667 Msa0552110:three_prime_UTR
TCAGAAGGTAGAAGTTGTAT+TGG 0.431779 4_1:+48557757 Msa0552110:five_prime_UTR
TCAGAAGGTAGAAGTTGTAT+TGG 0.431779 4_1:+48580555 Msa0552110:three_prime_UTR
AACTGCCGAAATTGCATTGA+AGG 0.433351 4_1:-48583982 None:intergenic
ATGATGAAGAGAGGTATATT+GGG 0.436033 4_1:+48578818 Msa0552110:three_prime_UTR
CTTATTTGTGACACACTCCC+GGG 0.436673 4_1:+48578736 Msa0552110:three_prime_UTR
AAGCGCGACATCTTTGTTAG+TGG 0.437300 4_1:+48580630 Msa0552110:three_prime_UTR
AATAAAGAAGATTACCGATC+TGG 0.441308 4_1:-48561749 None:intergenic
GCTTTCTGGTTTCGTCCAAA+TGG 0.442554 4_1:-48578471 None:intergenic
AACTTTAAGAGCTCTGGATT+CGG 0.443410 4_1:+48581883 Msa0552110:three_prime_UTR
AGGATGGCACTGCTTGTGTT+TGG 0.443754 4_1:+48558505 Msa0552110:intron
TTCAGCTGGCACTTCTTGAT+CGG 0.445031 4_1:+48581710 Msa0552110:three_prime_UTR
GTAGGTGGAACAGAGATTGC+CGG 0.446732 4_1:+48584038 Msa0552110:three_prime_UTR
CCATGTTATGTTGTGCCGTT+AGG 0.448547 4_1:-48556665 Msa0552120:CDS
GCAGGGGTGTTGTATGTTAG+AGG 0.450711 4_1:+48576685 Msa0552110:three_prime_UTR
ATATTTCAACGAACATTACA+AGG 0.451546 4_1:+48578520 Msa0552110:three_prime_UTR
TGCGAAATTGCAGACAGATT+GGG 0.452742 4_1:-48561702 None:intergenic
AGGTACCCTTGTACCTTGCT+TGG 0.453384 4_1:-48556602 Msa0552120:CDS
TGGATCAAGGGACATGATGC+AGG 0.456519 4_1:+48576354 Msa0552110:three_prime_UTR
GGCTAATTCTATCCAGAAAC+GGG 0.458178 4_1:+48584096 Msa0552110:three_prime_UTR
GCTTATTTGTGACACACTCC+CGG 0.461824 4_1:+48578735 Msa0552110:three_prime_UTR
TCAGCTGGCACTTCTTGATC+GGG 0.463787 4_1:+48581711 Msa0552110:three_prime_UTR
GACCAGAAACCTTGTATTTG+TGG 0.466017 4_1:-48581961 None:intergenic
ACACCCCTGCATCGTGTCCC+TGG 0.466443 4_1:-48553896 None:intergenic
ACACCCCTGCATCGTGTCCC+TGG 0.466443 4_1:-48562832 None:intergenic
ACACCCCTGCATCGTGTCCC+TGG 0.466443 4_1:-48576994 None:intergenic
TGGATCGAGGGACACGATGC+AGG 0.467043 4_1:+48562031 Msa0552110:three_prime_UTR
TGGATCGAGGGACACGATGC+AGG 0.467043 4_1:+48576193 Msa0552110:three_prime_UTR
TTATTTGACTATTCTTTACA+TGG 0.467382 4_1:-48577926 None:intergenic
GTTTGGAGACTTCCAGATAT+GGG 0.469760 4_1:+48558522 Msa0552110:CDS
GTTTGGAGACTTCCAGATAT+GGG 0.469760 4_1:+48581320 Msa0552110:three_prime_UTR
TAAGGTGTGTGGAGTATAGA+TGG 0.470097 4_1:+48558128 Msa0552110:exon
TAAGGTGTGTGGAGTATAGA+TGG 0.470097 4_1:+48580926 Msa0552110:three_prime_UTR
AAGCGCGGCATCTTTGTTAG+TGG 0.470716 4_1:+48557832 Msa0552110:five_prime_UTR
GGTGCACAAATAAGAGGTTA+AGG 0.474243 4_1:+48578899 Msa0552110:three_prime_UTR
TTGATCATCACTATCATCAC+TGG 0.474451 4_1:-48584353 None:intergenic
TTGCTTGGCTGACATCATCA+TGG 0.474830 4_1:-48556587 Msa0552120:CDS
AGAAAAGGTGCACAAATAAG+AGG 0.479747 4_1:+48578893 Msa0552110:three_prime_UTR
AGTTGTATTGGAGTCGGTAT+AGG 0.482906 4_1:+48557769 Msa0552110:five_prime_UTR
AGTTGTATTGGAGTCGGTAT+AGG 0.482906 4_1:+48580567 Msa0552110:three_prime_UTR
GATCGGGAGTTTGATGATCT+AGG 0.485183 4_1:+48581727 Msa0552110:three_prime_UTR
TGACATTGAATGCTATCAAA+AGG 0.487184 4_1:-48584390 None:intergenic
TTGCAGCTCTGGCTAGTGCT+TGG 0.489119 4_1:+48581521 Msa0552110:intron
TAAAGAAAGGTGTATTTGCA+TGG 0.491504 4_1:+48578566 Msa0552110:three_prime_UTR
TCGTGTTTGAAGACACTTGA+AGG 0.493320 4_1:+48558566 Msa0552110:three_prime_UTR
GGCGTGTCTCAGACTTCAGC+TGG 0.496883 4_1:+48581696 Msa0552110:three_prime_UTR
AGGCTAGTTGCATTGATCCC+TGG 0.497142 4_1:+48583618 Msa0552110:three_prime_UTR
GCATCTTTGTTAGTGGCAGC+AGG 0.500118 4_1:+48557839 Msa0552110:five_prime_UTR
CGGATCGAGGGACACGATGC+AGG 0.500527 4_1:+48553405 Msa0552110:five_prime_UTR
CGGATCGAGGGACACGATGC+AGG 0.500527 4_1:+48576502 Msa0552110:three_prime_UTR
ACATCTTTGTTAGTGGCAGC+AGG 0.500908 4_1:+48580637 Msa0552110:three_prime_UTR
TTCATTCTGTGATACGCACT+TGG 0.502055 4_1:-48583890 None:intergenic
AGCATTCACAAAAGCATGGT+TGG 0.506208 4_1:+48578848 Msa0552110:three_prime_UTR
TGTGCCGTTAGGCAGATTGA+TGG 0.507564 4_1:-48556654 Msa0552120:CDS
TCCCAATACCACAAAGCTGC+AGG 0.507681 4_1:-48556505 Msa0552120:CDS
GCTCACTTGCAGTGTATGCT+TGG 0.508802 4_1:+48582662 Msa0552110:three_prime_UTR
TGGCTAATTCTATCCAGAAA+CGG 0.509071 4_1:+48584095 Msa0552110:three_prime_UTR
ATCCCTTGTTGCCGCAGCCA+GGG 0.509449 4_1:-48583635 None:intergenic
ATGGAAAGGCGGCAAGTTGG+AGG 0.509578 4_1:-48577698 None:intergenic
TTCGTTTGTGGCAGAAGACA+CGG 0.510783 4_1:+48582595 Msa0552110:intron
AATAAGACGAAAGAATGAAC+AGG 0.510938 4_1:-48577992 None:intergenic
GAAACAGACCTGATGCAAGC+AGG 0.511840 4_1:-48582721 None:intergenic
TCTTGATGGCTACAATGCTA+AGG 0.511885 4_1:+48567687 Msa0552110:three_prime_UTR
TCTTGATGGCTACAATGCTA+AGG 0.511885 4_1:+48581549 Msa0552110:three_prime_UTR
ACTTAAACCTTGAAAAGTTG+GGG 0.514381 4_1:-48577570 None:intergenic
TTTCAAACCCAGGTCTAGGT+TGG 0.518913 4_1:+48561676 Msa0552110:intron
ATTATGTAGTTCTGGATCTA+GGG 0.519742 4_1:+48554213 Msa0552110:intron
ATTATGTAGTTCTGGATCTA+GGG 0.519742 4_1:+48577311 Msa0552110:intron
TCTCTCTCCCAGATCTGAGC+AGG 0.523506 4_1:-48584511 None:intergenic
GAAACCTTGTATTTGTGGAC+AGG 0.524408 4_1:-48581956 None:intergenic
CGAGGCTACATACAATCCTC+AGG 0.524500 4_1:-48584008 None:intergenic
GTGCAAAATTGCAGATGGAA+AGG 0.528514 4_1:-48577712 None:intergenic
AAGAGCATTTATCTCTTCCT+CGG 0.528824 4_1:-48581933 None:intergenic
GCTCATGCAGCAGCAGCCAG+TGG 0.529345 4_1:+48581611 Msa0552110:three_prime_UTR
GAAATAACCTGCTCAGATCT+GGG 0.529680 4_1:+48584504 Msa0552110:three_prime_UTR
CGGGATAATTCAAATGCGGT+TGG 0.532031 4_1:+48582615 Msa0552110:three_prime_UTR
GATGTGGCAGCTCCAATTAG+TGG 0.532885 4_1:+48558161 Msa0552110:CDS
GATGTGGCAGCTCCAATTAG+TGG 0.532885 4_1:+48580959 Msa0552110:three_prime_UTR
TGTGTGGCCAAGAAGGCCAC+TGG 0.533669 4_1:-48581627 None:intergenic
GAAGACTACTTACTTTACAC+TGG 0.535540 4_1:+48558307 Msa0552110:CDS
TGTCAGCCAAGCAAGGTACA+AGG 0.535950 4_1:+48556596 Msa0552110:five_prime_UTR
GTGTCTTCAAACACGACTCA+CGG 0.536372 4_1:-48558559 None:intergenic
TTAGGGTATTGCATATTCCC+CGG 0.536834 4_1:-48578754 None:intergenic
CATTTATTAATCCAAACTTG+TGG 0.537070 4_1:+48583756 Msa0552110:three_prime_UTR
ATAGGTCACATGTGAGCTGT+TGG 0.539352 4_1:+48557787 Msa0552110:five_prime_UTR
ATAGGTCACATGTGAGCTGT+TGG 0.539352 4_1:+48580585 Msa0552110:three_prime_UTR
GGTGGACTGACTTAAAGAAA+AGG 0.539467 4_1:+48578878 Msa0552110:three_prime_UTR
ATATTGTAGGTCTGGATCGA+GGG 0.539546 4_1:+48554045 Msa0552110:intron
ATCCCTGGCTGCGGCAACAA+GGG 0.539645 4_1:+48583633 Msa0552110:three_prime_UTR
GTGTCTTCAAACACGACTCA+CGG 0.541110 4_1:-48581357 None:intergenic
CAGATGGAAAGGCGGCAAGT+TGG 0.541263 4_1:-48577701 None:intergenic
GAATGTTACATATAGTAAGT+AGG 0.543452 4_1:+48577868 Msa0552110:three_prime_UTR
TCGTTTGTGGCAGAAGACAC+GGG 0.545789 4_1:+48582596 Msa0552110:intron
GATCCCTGGCTGCGGCAACA+AGG 0.547198 4_1:+48583632 Msa0552110:three_prime_UTR
CAATTTCAAACTGTTCAAAA+GGG 0.548072 4_1:+48578621 Msa0552110:three_prime_UTR
TTGTTGTGCATAATCGCAGA+TGG 0.549772 4_1:-48578202 None:intergenic
TCTTCCTGTCCACAAATACA+AGG 0.550485 4_1:+48581952 Msa0552110:three_prime_UTR
CCTCGGAACAAAATGATAGC+AGG 0.551628 4_1:-48558284 None:intergenic
CAGATATGGGCTATATCTGA+TGG 0.553081 4_1:+48558535 Msa0552110:CDS
CAGATATGGGCTATATCTGA+TGG 0.553081 4_1:+48581333 Msa0552110:three_prime_UTR
TGTTACCCGTGCGTTTCTTG+TGG 0.553708 4_1:+48558619 Msa0552110:three_prime_UTR
TGTTACCCGTGCGTTTCTTG+TGG 0.553708 4_1:+48581417 Msa0552110:three_prime_UTR
GCTCACTTTCTCTCTCTAGC+GGG 0.554046 4_1:-48584551 None:intergenic
TAGGGTATTGCATATTCCCC+GGG 0.554737 4_1:-48578753 None:intergenic
TGCCTCTTCGAATTCTTGAA+CGG 0.557552 4_1:+48556479 Msa0552110:five_prime_UTR
ATAACATTTATTCGGATCGA+GGG 0.558498 4_1:+48553393 Msa0552110:five_prime_UTR
ATAACATTTATTCGGATCGA+GGG 0.558498 4_1:+48576490 Msa0552110:intron
GTTCCACCTACAAAGCTTCG+AGG 0.558580 4_1:-48584026 None:intergenic
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+48554059 Msa0552110:five_prime_UTR
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+48577157 Msa0552110:three_prime_UTR
TTCTTGGCCACACAGAACTA+CGG 0.560332 4_1:+48581636 Msa0552110:three_prime_UTR
TTTCACAAGAGCCTCGACTT+CGG 0.561783 4_1:-48584134 None:intergenic
GTGCATAATCGCAGATGGAA+AGG 0.562609 4_1:-48578197 None:intergenic
CCCTAACTAAGAAGTGGAAG+AGG 0.563192 4_1:+48578590 Msa0552110:three_prime_UTR
GGTAGAAGTTGTATTGGAGT+CGG 0.564071 4_1:+48557763 Msa0552110:five_prime_UTR
GGTAGAAGTTGTATTGGAGT+CGG 0.564071 4_1:+48580561 Msa0552110:three_prime_UTR
AAACAGACCTGATGCAAGCA+GGG 0.564495 4_1:-48582720 None:intergenic
GTCCTCATTTCTAGCGATCA+CGG 0.566900 4_1:+48578664 Msa0552110:three_prime_UTR
TGCTTGGAGCAAGTTAATGT+TGG 0.567132 4_1:+48582678 Msa0552110:three_prime_UTR
CAAAAGAACTTGCAATTAAG+CGG 0.569807 4_1:-48584327 None:intergenic
AGCTCACTTTCTCTCTCTAG+CGG 0.570103 4_1:-48584552 None:intergenic
TATAACATTTATTCGGATCG+AGG 0.571512 4_1:+48553392 Msa0552110:five_prime_UTR
TATAACATTTATTCGGATCG+AGG 0.571512 4_1:+48576489 Msa0552110:intron
AAAGAAAGGTGTATTTGCAT+GGG 0.573502 4_1:+48578567 Msa0552110:three_prime_UTR
GGATCCAGGGACACGATGCA+GGG 0.574165 4_1:+48553892 Msa0552110:five_prime_UTR
GGATCCAGGGACACGATGCA+GGG 0.574165 4_1:+48562828 Msa0552110:three_prime_UTR
GGATCCAGGGACACGATGCA+GGG 0.574165 4_1:+48576990 Msa0552110:three_prime_UTR
GGATCGAGGGACACGATGCA+GGG 0.575783 4_1:+48553406 Msa0552110:five_prime_UTR
GGATCGAGGGACACGATGCA+GGG 0.575783 4_1:+48576503 Msa0552110:three_prime_UTR
GGATCAAGGGACACGATGCA+GGG 0.576185 4_1:+48576668 Msa0552110:three_prime_UTR
AGAACTTAATTTCGGAGGCA+CGG 0.576468 4_1:+48577899 Msa0552110:three_prime_UTR
CCTAACGGCACAACATAACA+TGG 0.576607 4_1:+48556665 Msa0552110:five_prime_UTR
GTTAGGTTGTTGGAATCAGA+AGG 0.577503 4_1:+48557742 Msa0552110:five_prime_UTR
GTTAGGTTGTTGGAATCAGA+AGG 0.577503 4_1:+48580540 Msa0552110:three_prime_UTR
ACTTGCGAGTCTGAATTCAC+AGG 0.580218 4_1:+48556561 Msa0552110:five_prime_UTR
GATCGAGGGACACGATGCAC+GGG 0.580715 4_1:+48553728 Msa0552110:five_prime_UTR
GATCGAGGGACACGATGCAC+GGG 0.580715 4_1:+48576826 Msa0552110:three_prime_UTR
TGTCTTCAAACACGACTCAC+GGG 0.581712 4_1:-48558558 None:intergenic
TGTCTTCAAACACGACTCAC+GGG 0.581712 4_1:-48581356 None:intergenic
TACCGTGATCGCTAGAAATG+AGG 0.582503 4_1:-48578666 None:intergenic
CCCAAGCATTCACAAAAGCA+TGG 0.582651 4_1:+48578844 Msa0552110:three_prime_UTR
AGAAACGCACGGGTAACAAA+CGG 0.583364 4_1:-48558614 None:intergenic
AGAAACGCACGGGTAACAAA+CGG 0.583364 4_1:-48581412 None:intergenic
AAGGGACAAATCAGAACAGT+GGG 0.584030 4_1:+48578639 Msa0552110:three_prime_UTR
TCAATAACACTTGCAAGCCG+AGG 0.585176 4_1:+48581674 Msa0552110:three_prime_UTR
TAAAGTAAGTAGTCTTCCCT+CGG 0.587145 4_1:-48558301 None:intergenic
TACTGCACCTTCTATGTCCG+AGG 0.589699 4_1:+48581916 Msa0552110:three_prime_UTR
CTTGCAAGTGTTATTGATGG+AGG 0.591014 4_1:-48581668 None:intergenic
AATATTGTAGGTCTGGATCG+AGG 0.591299 4_1:+48554044 Msa0552110:intron
TATCAAGAACTTAATTTCGG+AGG 0.592973 4_1:+48577894 Msa0552110:three_prime_UTR
CGTGTTTGAAGACACTTGAA+GGG 0.593182 4_1:+48558567 Msa0552110:three_prime_UTR
GTGGAGTATAGATGGTCTCT+CGG 0.595211 4_1:+48558136 Msa0552110:exon
GTGGAGTATAGATGGTCTCT+CGG 0.595211 4_1:+48580934 Msa0552110:three_prime_UTR
GGATCAAGGGACATGATGCA+GGG 0.595399 4_1:+48576355 Msa0552110:three_prime_UTR
GGATCGAGGGACACGATGCA+CGG 0.598901 4_1:+48553727 Msa0552110:five_prime_UTR
GGATCGAGGGACACGATGCA+CGG 0.598901 4_1:+48576825 Msa0552110:three_prime_UTR
GTTGCATTGATCCCTGGCTG+CGG 0.599433 4_1:+48583624 Msa0552110:three_prime_UTR
GGATCGAGGGACACGATGCA+GGG 0.601952 4_1:+48562032 Msa0552110:three_prime_UTR
GGATCGAGGGACACGATGCA+GGG 0.601952 4_1:+48576194 Msa0552110:three_prime_UTR
CATGGGCCCTAACTAAGAAG+TGG 0.602199 4_1:+48578584 Msa0552110:three_prime_UTR
CAATAACACTTGCAAGCCGA+GGG 0.606396 4_1:+48581675 Msa0552110:three_prime_UTR
TGATGATAGTGATGATCAAG+CGG 0.609139 4_1:+48584357 Msa0552110:three_prime_UTR
GCCGTTAGGCAGATTGATGG+AGG 0.611185 4_1:-48556651 Msa0552120:CDS
CTTGCGAGTCTGAATTCACA+GGG 0.614185 4_1:+48556562 Msa0552110:five_prime_UTR
AAATACATAATTGAGCGCAA+TGG 0.614605 4_1:-48584161 None:intergenic
GCAAGTGAGCTCATCATCAG+AGG 0.615069 4_1:-48582649 None:intergenic
GCTTGGCTGACATCATCATG+GGG 0.617695 4_1:-48556585 Msa0552120:CDS
TCCTACCACAAGAAACGCAC+GGG 0.620429 4_1:-48558624 None:intergenic
TCCTACCACAAGAAACGCAC+GGG 0.620429 4_1:-48581422 None:intergenic
GTAGTTCTGTGTGGCCAAGA+AGG 0.622680 4_1:-48581634 None:intergenic
GATCCAGGGACACGATGCAG+GGG 0.623000 4_1:+48553893 Msa0552110:five_prime_UTR
GATCCAGGGACACGATGCAG+GGG 0.623000 4_1:+48562829 Msa0552110:three_prime_UTR
GATCCAGGGACACGATGCAG+GGG 0.623000 4_1:+48576991 Msa0552110:three_prime_UTR
TAGGCAGATTGATGGAGGCA+AGG 0.623896 4_1:-48556646 Msa0552120:CDS
AGATGGTCTCTCGGACGATG+TGG 0.625397 4_1:+48558145 Msa0552110:exon
AGATGGTCTCTCGGACGATG+TGG 0.625397 4_1:+48580943 Msa0552110:three_prime_UTR
GCCTCCATCAATCTGCCTAA+CGG 0.628952 4_1:+48556650 Msa0552110:five_prime_UTR
GATCATACTCTTAAGGTGTG+TGG 0.632245 4_1:+48558117 Msa0552110:five_prime_UTR
GATCATACTCTTAAGGTGTG+TGG 0.632245 4_1:+48580915 Msa0552110:three_prime_UTR
ATGGTTCTTATAACACCCAA+AGG 0.634485 4_1:+48577757 Msa0552110:three_prime_UTR
GTGCATAGAAGCCGAAGTCG+AGG 0.634827 4_1:+48584123 Msa0552110:three_prime_UTR
GTTCCTGAACATTGTAAACG+TGG 0.641267 4_1:+48584075 Msa0552110:three_prime_UTR
TATCTTTCTCTCTCTAGCGG+CGG 0.642113 4_1:-48584585 None:intergenic
GTCAGCCAAGCAAGGTACAA+GGG 0.642769 4_1:+48556597 Msa0552110:five_prime_UTR
ATGATGATGTCAGCCAAGCA+AGG 0.643183 4_1:+48556589 Msa0552110:five_prime_UTR
TGATCATCACTATCATCACT+GGG 0.644133 4_1:-48584352 None:intergenic
CTCCTACCACAAGAAACGCA+CGG 0.646206 4_1:-48558625 None:intergenic
CTCCTACCACAAGAAACGCA+CGG 0.646206 4_1:-48581423 None:intergenic
CTTAAACCTTGAAAAGTTGG+GGG 0.648426 4_1:-48577569 None:intergenic
TCTGTTCAGAAGAGTAAACA+AGG 0.648775 4_1:-48578159 None:intergenic
TAGCCTCGAAGCTTTGTAGG+TGG 0.650173 4_1:+48584023 Msa0552110:three_prime_UTR
CAAAATTGCAGATGGAAAGG+CGG 0.651308 4_1:-48577709 None:intergenic
TGAAGTCTGAGACACGCCCT+CGG 0.652238 4_1:-48581691 None:intergenic
AGAAGCTTAATGATGAAGAG+AGG 0.653092 4_1:+48578809 Msa0552110:three_prime_UTR
GTGAATTCAGACTCGCAAGT+GGG 0.653816 4_1:-48556558 Msa0552120:CDS
TATTGTAGGTCTGGATCGAG+GGG 0.655007 4_1:+48554046 Msa0552110:intron
GATCAAGGGACACGATGCAG+GGG 0.655314 4_1:+48576669 Msa0552110:three_prime_UTR
TGTGTTTATTGAAGTTACTG+TGG 0.656764 4_1:-48583913 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.658760 4_1:+48553407 Msa0552110:five_prime_UTR
GATCGAGGGACACGATGCAG+GGG 0.658760 4_1:+48576504 Msa0552110:three_prime_UTR
ATAGTGATGATCAAGCGGAA+CGG 0.662954 4_1:+48584362 Msa0552110:three_prime_UTR
TGTGAATTCAGACTCGCAAG+TGG 0.664881 4_1:-48556559 Msa0552120:CDS
AAAGGGACAAATCAGAACAG+TGG 0.666303 4_1:+48578638 Msa0552110:three_prime_UTR
TTATTTGTGACACACTCCCG+GGG 0.669932 4_1:+48578737 Msa0552110:three_prime_UTR
GATCAAGGGACATGATGCAG+GGG 0.677215 4_1:+48576356 Msa0552110:three_prime_UTR
AATTTCGGCAGTTACACCTG+AGG 0.678139 4_1:+48583992 Msa0552110:three_prime_UTR
GGACAAATCAGAACAGTGGG+TGG 0.684259 4_1:+48578642 Msa0552110:three_prime_UTR
GACACGGGATAATTCAAATG+CGG 0.690371 4_1:+48582611 Msa0552110:three_prime_UTR
GACCGTTCAAGAATTCGAAG+AGG 0.699725 4_1:-48556481 Msa0552120:CDS
TATGCAACCGTAGTTCTGTG+TGG 0.732630 4_1:-48581643 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48553385-48553404 Msa0552110:five_prime_UTR 10.0%
!! GAAATATAAAATTGATAAAA+TGG + chr4_1:48554436-48554455 Msa0552110:intron 10.0%
!! TGTTTGTTTAATATATAATT+TGG - chr4_1:48557380-48557399 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+TGG + chr4_1:48557626-48557645 Msa0552110:intron 10.0%
!! GAATTATATATTACTATTAT+TGG - chr4_1:48560301-48560320 Msa0552130:intron 10.0%
!!! ATTTTATTGAAATTGAAATA+CGG + chr4_1:48561488-48561507 Msa0552110:intron 10.0%
!!! TAAATAATTTAATTTTGTAC+AGG - chr4_1:48561993-48562012 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48553385-48553404 Msa0552110:five_prime_UTR 10.0%
!! GAAATATAAAATTGATAAAA+TGG + chr4_1:48554436-48554455 Msa0552110:intron 10.0%
!! TGTTTGTTTAATATATAATT+TGG - chr4_1:48557380-48557399 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+TGG + chr4_1:48557626-48557645 Msa0552110:intron 10.0%
!!! AGCTTTATATATATATATTT+TGG + chr4_1:48568530-48568549 Msa0552110:intron 10.0%
!!! TTATTTTGAATGTTTATTTA+AGG - chr4_1:48570560-48570579 None:intergenic 10.0%
!!! ATAAGTAAATTTTTTTTGTA+GGG - chr4_1:48571038-48571057 None:intergenic 10.0%
!!! TATAAGTAAATTTTTTTTGT+AGG - chr4_1:48571039-48571058 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG - chr4_1:48571099-48571118 None:intergenic 10.0%
!! AATTCTATTAAAATTAAGTA+AGG + chr4_1:48571421-48571440 Msa0552110:intron 10.0%
!!! TAGTTACTAAATTTTTTTTA+GGG - chr4_1:48571495-48571514 None:intergenic 10.0%
!!! TTAGTTACTAAATTTTTTTT+AGG - chr4_1:48571496-48571515 None:intergenic 10.0%
!! TTAAAGAAATGATTAAATAA+TGG + chr4_1:48571596-48571615 Msa0552110:intron 10.0%
!! ATCTTCAATAATTATAATAA+GGG - chr4_1:48572021-48572040 None:intergenic 10.0%
!! AATCTTCAATAATTATAATA+AGG - chr4_1:48572022-48572041 None:intergenic 10.0%
!!! TTCTTGTATTTTAAAATTTA+GGG - chr4_1:48572221-48572240 None:intergenic 10.0%
!! GAATTATATATTACTATTAT+TGG - chr4_1:48560301-48560320 Msa0552130:intron 10.0%
!!! ATTTTATTGAAATTGAAATA+CGG + chr4_1:48561488-48561507 Msa0552110:intron 10.0%
!!! TAAATAATTTAATTTTGTAC+AGG - chr4_1:48561993-48562012 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48553385-48553404 Msa0552110:five_prime_UTR 10.0%
!! GAAATATAAAATTGATAAAA+TGG + chr4_1:48554436-48554455 Msa0552110:intron 10.0%
!! TGTTTGTTTAATATATAATT+TGG - chr4_1:48557380-48557399 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+TGG + chr4_1:48557626-48557645 Msa0552110:intron 10.0%
!!! AAAGCTTTATATATATATTT+TGG + chr4_1:48582390-48582409 Msa0552110:intron 10.0%
!!! TTATTTTGAATGTTTATTTA+AGG - chr4_1:48570560-48570579 None:intergenic 10.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48553947-48553966 Msa0552110:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48554019-48554038 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48554318-48554337 None:intergenic 15.0%
!! AAAATACCATATTATCAAAA+TGG + chr4_1:48554640-48554659 Msa0552110:intron 15.0%
!! ATATATCAAGAACTTAATTT+CGG + chr4_1:48554793-48554812 Msa0552110:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr4_1:48555169-48555188 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr4_1:48555272-48555291 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr4_1:48555296-48555315 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr4_1:48555295-48555314 Msa0552110:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG - chr4_1:48556837-48556856 Msa0552120:intron 15.0%
!! TTTATCAAAACAAAATGAAA+AGG + chr4_1:48557340-48557359 Msa0552110:intron 15.0%
!! AATATTATTATCAACGTATA+AGG - chr4_1:48557655-48557674 None:intergenic 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:48558234-48558253 Msa0552110:intron 15.0%
!! TAACATGAAAAAATAATTGA+TGG - chr4_1:48558479-48558498 None:intergenic 15.0%
!! AAAAGAACAAAATTAGATAT+AGG - chr4_1:48558655-48558674 None:intergenic 15.0%
!!! AAGAATTAAAAAGTTTTTGA+AGG - chr4_1:48559192-48559211 Msa0552130:CDS 15.0%
!! TATGATAATATATTAACATC+TGG - chr4_1:48559794-48559813 Msa0552130:CDS 15.0%
!!! CTTTTCAAAATTTCATAAAT+AGG + chr4_1:48559937-48559956 Msa0552110:intron 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48553853-48553872 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48553947-48553966 Msa0552110:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48554019-48554038 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48554318-48554337 None:intergenic 15.0%
!! AAAATACCATATTATCAAAA+TGG + chr4_1:48554640-48554659 Msa0552110:intron 15.0%
!! ATATATCAAGAACTTAATTT+CGG + chr4_1:48554793-48554812 Msa0552110:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr4_1:48555169-48555188 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr4_1:48555272-48555291 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr4_1:48555296-48555315 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr4_1:48555295-48555314 Msa0552110:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG - chr4_1:48556837-48556856 Msa0552120:intron 15.0%
!! TTTATCAAAACAAAATGAAA+AGG + chr4_1:48557340-48557359 Msa0552110:intron 15.0%
!! AATATTATTATCAACGTATA+AGG - chr4_1:48557655-48557674 None:intergenic 15.0%
!! TAACATGAAAAAATAATTGA+TGG - chr4_1:48558479-48558498 None:intergenic 15.0%
!! AAAAGAACAAAATTAGATAT+AGG - chr4_1:48558655-48558674 None:intergenic 15.0%
!! AAATTGAAAATTCATATTTG+AGG + chr4_1:48568270-48568289 Msa0552110:intron 15.0%
!! AATTGAAAATTCATATTTGA+GGG + chr4_1:48568271-48568290 Msa0552110:intron 15.0%
!!! TATATTTTGGATAATTAACT+CGG + chr4_1:48568543-48568562 Msa0552110:intron 15.0%
!!! AACTACAGATAAAATTTTAT+AGG - chr4_1:48569250-48569269 None:intergenic 15.0%
!!! TAAAAGTTTAAAATTGAAAC+AGG - chr4_1:48569948-48569967 None:intergenic 15.0%
!!! GTTTCAATTTTAAACTTTTA+TGG + chr4_1:48569948-48569967 Msa0552110:intron 15.0%
!!! ATTATGTATTTTTTATTCTC+TGG + chr4_1:48570315-48570334 Msa0552110:intron 15.0%
!!! TCACTTTTTAATTTATTTTC+AGG - chr4_1:48570389-48570408 None:intergenic 15.0%
!! AAAATGGTTAAATATGTATT+TGG + chr4_1:48570952-48570971 Msa0552110:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - chr4_1:48571070-48571089 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - chr4_1:48571071-48571090 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr4_1:48571230-48571249 Msa0552110:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr4_1:48571265-48571284 Msa0552110:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr4_1:48571349-48571368 Msa0552110:intron 15.0%
!! ATAAAATTTATAGAACTAGA+AGG - chr4_1:48571712-48571731 None:intergenic 15.0%
!! AAAAAAAAAGATACAACTAA+TGG + chr4_1:48571808-48571827 Msa0552110:intron 15.0%
!!! AAACTAAAACTTTCTTTTTT+TGG + chr4_1:48571956-48571975 Msa0552110:intron 15.0%
!!! GTTCTTGTATTTTAAAATTT+AGG - chr4_1:48572222-48572241 None:intergenic 15.0%
!!! AAATTGTAATTTTTAACACA+GGG + chr4_1:48572301-48572320 Msa0552110:intron 15.0%
!!! AAGAATTAAAAAGTTTTTGA+AGG - chr4_1:48559192-48559211 Msa0552130:CDS 15.0%
!! TATGATAATATATTAACATC+TGG - chr4_1:48559794-48559813 Msa0552130:CDS 15.0%
!!! CTTTTCAAAATTTCATAAAT+AGG + chr4_1:48559937-48559956 Msa0552110:intron 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48553853-48553872 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48553531-48553550 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48553947-48553966 Msa0552110:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48554019-48554038 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48554318-48554337 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48554318-48554337 None:intergenic 15.0%
!! AAAATACCATATTATCAAAA+TGG + chr4_1:48554640-48554659 Msa0552110:intron 15.0%
!! ATATATCAAGAACTTAATTT+CGG + chr4_1:48554793-48554812 Msa0552110:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG - chr4_1:48556837-48556856 Msa0552120:intron 15.0%
!! TTTATCAAAACAAAATGAAA+AGG + chr4_1:48557340-48557359 Msa0552110:intron 15.0%
!! AATATTATTATCAACGTATA+AGG - chr4_1:48557655-48557674 None:intergenic 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:48558234-48558253 Msa0552110:intron 15.0%
!! TAACATGAAAAAATAATTGA+TGG - chr4_1:48558479-48558498 None:intergenic 15.0%
!! AAAAGAACAAAATTAGATAT+AGG - chr4_1:48558655-48558674 None:intergenic 15.0%
!! AAATTGAAAATTCATATTTG+AGG + chr4_1:48568270-48568289 Msa0552110:intron 15.0%
!! AATTGAAAATTCATATTTGA+GGG + chr4_1:48568271-48568290 Msa0552110:intron 15.0%
!!! TATATTTTGGATAATTAACT+CGG + chr4_1:48568543-48568562 Msa0552110:intron 15.0%
!!! AACTACAGATAAAATTTTAT+AGG - chr4_1:48569250-48569269 None:intergenic 15.0%
!!! TAAAAGTTTAAAATTGAAAC+AGG - chr4_1:48569948-48569967 None:intergenic 15.0%
!!! GTTTCAATTTTAAACTTTTA+TGG + chr4_1:48569948-48569967 Msa0552110:intron 15.0%
!!! ATTATGTATTTTTTATTCTC+TGG + chr4_1:48570315-48570334 Msa0552110:intron 15.0%
!!! TCACTTTTTAATTTATTTTC+AGG - chr4_1:48570389-48570408 None:intergenic 15.0%
!! ACATTTATTCCTAATATTGT+AGG + chr4_1:48554032-48554051 Msa0552110:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48554107-48554126 None:intergenic 20.0%
!!! ATGAAAAAGCAATTTTTTGT+TGG - chr4_1:48554149-48554168 None:intergenic 20.0%
!! AAAAACAAAGATTGAAACAT+AGG - chr4_1:48554274-48554293 None:intergenic 20.0%
!!! CAAATTTTATAATTTTGGAC+AGG - chr4_1:48554356-48554375 None:intergenic 20.0%
!!! GTTGGCAAATTTTATAATTT+TGG - chr4_1:48554361-48554380 None:intergenic 20.0%
!!! TAAGAACCATTTTGATAATA+TGG - chr4_1:48554649-48554668 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG - chr4_1:48554831-48554850 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr4_1:48555209-48555228 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr4_1:48555286-48555305 Msa0552110:intron 20.0%
!! ACTGTTGTATATGAAATAAA+AGG - chr4_1:48555491-48555510 None:intergenic 20.0%
!! ATTATAAAACTAGTTACAGT+AGG - chr4_1:48579159-48579178 None:intergenic 20.0%
!!! GTTTTATAATTTCATTCTCT+AGG + chr4_1:48555713-48555732 Msa0552110:intron 20.0%
!! ATCTACAATTTAAATAAGAG+AGG + chr4_1:48555913-48555932 Msa0552110:intron 20.0%
!! TCTACAATTTAAATAAGAGA+GGG + chr4_1:48555914-48555933 Msa0552110:intron 20.0%
!! ATGCAATACATGAAAAAAAT+AGG - chr4_1:48578700-48578719 None:intergenic 20.0%
!! TATATAATGAGTACAAAAAG+TGG - chr4_1:48556722-48556741 Msa0552120:CDS 20.0%
!! TATAAAGATAACTGTTGATA+TGG + chr4_1:48556738-48556757 Msa0552110:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG + chr4_1:48556798-48556817 Msa0552110:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG - chr4_1:48556804-48556823 Msa0552120:intron 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG + chr4_1:48557409-48557428 Msa0552110:intron 20.0%
!! CAACAAGAATTTATTTATCA+TGG + chr4_1:48557896-48557915 Msa0552110:intron 20.0%
!!! TTTTTTCAATCTATTCTCAA+GGG + chr4_1:48558013-48558032 Msa0552110:intron 20.0%
!! ATCAGCTAATCTTATTAAAA+AGG + chr4_1:48558373-48558392 Msa0552110:CDS 20.0%
!! AAACTAAATCTTCAAACAAT+AGG - chr4_1:48558445-48558464 None:intergenic 20.0%
!! CAACAAATATAAGAGAAAAT+GGG + chr4_1:48559264-48559283 Msa0552110:intron 20.0%
!!! TTGTTGTTAAACAAAGAATT+AGG + chr4_1:48559653-48559672 Msa0552110:intron 20.0%
!! ATTCCATATCATCAATAATT+CGG - chr4_1:48559724-48559743 Msa0552130:CDS 20.0%
!! ATAATTAATATTACGCTGTT+GGG - chr4_1:48559880-48559899 Msa0552130:intron 20.0%
!! AATAATTAATATTACGCTGT+TGG - chr4_1:48559881-48559900 Msa0552130:intron 20.0%
!!! ATTTTCATTGATGTTGAATT+TGG - chr4_1:48560044-48560063 Msa0552130:intron 20.0%
!!! ATCAAAAGTTAATTGCTTTT+GGG - chr4_1:48560943-48560962 None:intergenic 20.0%
!! AGTTATGATAAAAATAGTTC+AGG - chr4_1:48561109-48561128 None:intergenic 20.0%
!!! TGATAATTTTGACTAATAAG+TGG + chr4_1:48561568-48561587 Msa0552110:intron 20.0%
!!! CTTTGTTTTTTATTGTTTGA+TGG + chr4_1:48562083-48562102 Msa0552110:intron 20.0%
!! ACATTTATTCCTAATATTGT+AGG + chr4_1:48554032-48554051 Msa0552110:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48554107-48554126 None:intergenic 20.0%
!!! ATGAAAAAGCAATTTTTTGT+TGG - chr4_1:48554149-48554168 None:intergenic 20.0%
!! AAAAACAAAGATTGAAACAT+AGG - chr4_1:48554274-48554293 None:intergenic 20.0%
!!! CAAATTTTATAATTTTGGAC+AGG - chr4_1:48554356-48554375 None:intergenic 20.0%
!!! GTTGGCAAATTTTATAATTT+TGG - chr4_1:48554361-48554380 None:intergenic 20.0%
!!! TAAGAACCATTTTGATAATA+TGG - chr4_1:48554649-48554668 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG - chr4_1:48554831-48554850 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr4_1:48555209-48555228 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr4_1:48555286-48555305 Msa0552110:intron 20.0%
!! ACTGTTGTATATGAAATAAA+AGG - chr4_1:48555491-48555510 None:intergenic 20.0%
!! ATTATAAAACTAGTTACAGT+AGG - chr4_1:48579159-48579178 None:intergenic 20.0%
!!! GTTTTATAATTTCATTCTCT+AGG + chr4_1:48555713-48555732 Msa0552110:intron 20.0%
!! ATCTACAATTTAAATAAGAG+AGG + chr4_1:48555913-48555932 Msa0552110:intron 20.0%
!! TCTACAATTTAAATAAGAGA+GGG + chr4_1:48555914-48555933 Msa0552110:intron 20.0%
!! ATGCAATACATGAAAAAAAT+AGG - chr4_1:48578700-48578719 None:intergenic 20.0%
!! TATATAATGAGTACAAAAAG+TGG - chr4_1:48556722-48556741 Msa0552120:CDS 20.0%
!! TATAAAGATAACTGTTGATA+TGG + chr4_1:48556738-48556757 Msa0552110:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG + chr4_1:48556798-48556817 Msa0552110:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG - chr4_1:48556804-48556823 Msa0552120:intron 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG + chr4_1:48557409-48557428 Msa0552110:intron 20.0%
!! CAACAAGAATTTATTTATCA+TGG + chr4_1:48557896-48557915 Msa0552110:intron 20.0%
!!! TTTTTTCAATCTATTCTCAA+GGG + chr4_1:48558013-48558032 Msa0552110:intron 20.0%
!! ATCAGCTAATCTTATTAAAA+AGG + chr4_1:48558373-48558392 Msa0552110:CDS 20.0%
!! AAACTAAATCTTCAAACAAT+AGG - chr4_1:48558445-48558464 None:intergenic 20.0%
!! AATGTCAAAATCCATTTAAA+GGG - chr4_1:48568165-48568184 None:intergenic 20.0%
!! AGTTAGTTATCTTAAAATCA+TGG + chr4_1:48568592-48568611 Msa0552110:intron 20.0%
!! GTTAGTTATCTTAAAATCAT+GGG + chr4_1:48568593-48568612 Msa0552110:intron 20.0%
!! TTAGTTATCTTAAAATCATG+GGG + chr4_1:48568594-48568613 Msa0552110:intron 20.0%
!!! ATTTTATCTGTAGTTGAAAT+TGG + chr4_1:48569255-48569274 Msa0552110:intron 20.0%
!!! TAAAATGCTTTTCAAAACAA+GGG - chr4_1:48569301-48569320 None:intergenic 20.0%
!!! TTTTGAAAAGCATTTTACTT+TGG + chr4_1:48569304-48569323 Msa0552110:intron 20.0%
!!! AATATCTACACAACTTTTTT+GGG - chr4_1:48569542-48569561 None:intergenic 20.0%
!!! AAATATCTACACAACTTTTT+TGG - chr4_1:48569543-48569562 None:intergenic 20.0%
!!! TTTTTGACAAGTTATTTGAA+TGG + chr4_1:48570439-48570458 Msa0552110:intron 20.0%
!!! TAGTTCTGATAATCAATTAT+CGG - chr4_1:48570891-48570910 None:intergenic 20.0%
!! AACTAATGGTAGTAAAAAAA+TGG + chr4_1:48570936-48570955 Msa0552110:intron 20.0%
!!! TAAAAGGTCACAATTTTATA+GGG - chr4_1:48570979-48570998 None:intergenic 20.0%
!!! TTAAAAGGTCACAATTTTAT+AGG - chr4_1:48570980-48570999 None:intergenic 20.0%
!! TAAGTAAGACTAAACTTAAA+AGG - chr4_1:48570995-48571014 None:intergenic 20.0%
!!! TTTTTTTGTAGGGATTAAAA+AGG - chr4_1:48571028-48571047 None:intergenic 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr4_1:48571319-48571338 None:intergenic 20.0%
!!! TTTAGGGTTAATTATGTTTT+TGG - chr4_1:48571479-48571498 None:intergenic 20.0%
!! TAAGTTAGTACTACAATTAT+AGG - chr4_1:48571667-48571686 None:intergenic 20.0%
!!! TTTTTTTGAAAGAACTAGTT+GGG - chr4_1:48571791-48571810 None:intergenic 20.0%
!!! TTTTTTTTGAAAGAACTAGT+TGG - chr4_1:48571792-48571811 None:intergenic 20.0%
!! TAACATTTCCCTTATAATAA+GGG - chr4_1:48571836-48571855 None:intergenic 20.0%
!! TTAACATTTCCCTTATAATA+AGG - chr4_1:48571837-48571856 None:intergenic 20.0%
!! TGTGAATACATAAAAGATTA+GGG - chr4_1:48572137-48572156 None:intergenic 20.0%
!! TTGTGAATACATAAAAGATT+AGG - chr4_1:48572138-48572157 None:intergenic 20.0%
!!! GAAATTGTAATTTTTAACAC+AGG + chr4_1:48572300-48572319 Msa0552110:intron 20.0%
!! GATATAAAAATCGATATAGA+AGG - chr4_1:48572589-48572608 None:intergenic 20.0%
!!! AAACCAAAATCAGAAATTTT+GGG + chr4_1:48572855-48572874 Msa0552110:intron 20.0%
!! CAACAAATATAAGAGAAAAT+GGG + chr4_1:48559264-48559283 Msa0552110:intron 20.0%
!!! TTGTTGTTAAACAAAGAATT+AGG + chr4_1:48559653-48559672 Msa0552110:intron 20.0%
!! ATTCCATATCATCAATAATT+CGG - chr4_1:48559724-48559743 Msa0552130:CDS 20.0%
!! ATAATTAATATTACGCTGTT+GGG - chr4_1:48559880-48559899 Msa0552130:intron 20.0%
!! AATAATTAATATTACGCTGT+TGG - chr4_1:48559881-48559900 Msa0552130:intron 20.0%
!!! ATTTTCATTGATGTTGAATT+TGG - chr4_1:48560044-48560063 Msa0552130:intron 20.0%
!!! ATCAAAACTTAATTGCTTTT+GGG - chr4_1:48575105-48575124 None:intergenic 20.0%
!! AGTTATGATAAAAATAGTTC+AGG - chr4_1:48561109-48561128 None:intergenic 20.0%
!!! TGATAATTTTGACTAATAAG+TGG + chr4_1:48561568-48561587 Msa0552110:intron 20.0%
!!! CTTTGTTTTTTATTGTTTGA+TGG + chr4_1:48562083-48562102 Msa0552110:intron 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:48576964-48576983 Msa0552110:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48554107-48554126 None:intergenic 20.0%
!! AAAAACAAAGATTGAAACAT+AGG - chr4_1:48554274-48554293 None:intergenic 20.0%
!!! CAAATTTTATAATTTTGGAC+AGG - chr4_1:48554356-48554375 None:intergenic 20.0%
!!! GTTGGCAAATTTTATAATTT+TGG - chr4_1:48554361-48554380 None:intergenic 20.0%
!! GAAAAAAAAATGTCAAATGT+TGG - chr4_1:48577477-48577496 None:intergenic 20.0%
!!! TTTTTTTTTCTTCTCATTGT+TGG + chr4_1:48577487-48577506 Msa0552110:three_prime_UTR 20.0%
!!! TAAGAACCATTTTGATAATA+TGG - chr4_1:48554649-48554668 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG - chr4_1:48554831-48554850 None:intergenic 20.0%
!! ACAACAAAATACTTTATTAG+AGG + chr4_1:48578218-48578237 Msa0552110:three_prime_UTR 20.0%
!!! GTTATTTGCAGTAATTTTTA+AGG + chr4_1:48578242-48578261 Msa0552110:three_prime_UTR 20.0%
!! ACTGTTGTATATGAAATAAA+AGG - chr4_1:48555491-48555510 None:intergenic 20.0%
!! ATGCAATACATGAAAAAAAT+AGG + chr4_1:48578700-48578719 Msa0552110:three_prime_UTR 20.0%
!! TCTACAATTTAAATAAGAGA+GGG - chr4_1:48555914-48555933 None:intergenic 20.0%
!! ATCTACAATTTAAATAAGAG+AGG - chr4_1:48555913-48555932 None:intergenic 20.0%
!!! GTTTTATAATTTCATTCTCT+AGG - chr4_1:48555713-48555732 None:intergenic 20.0%
!! ATTATAAAACTAGTTACAGT+AGG + chr4_1:48579159-48579178 Msa0552110:intron 20.0%
!! TATATAATGAGTACAAAAAG+TGG - chr4_1:48556722-48556741 Msa0552120:CDS 20.0%
!! TATAAAGATAACTGTTGATA+TGG + chr4_1:48556738-48556757 Msa0552110:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG + chr4_1:48556798-48556817 Msa0552110:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG - chr4_1:48556804-48556823 Msa0552120:intron 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG + chr4_1:48557409-48557428 Msa0552110:intron 20.0%
!! CAACAAGAATTTATTTATCA+TGG + chr4_1:48557896-48557915 Msa0552110:intron 20.0%
!!! TTTTTTCAATCTATTCTCAA+GGG + chr4_1:48558013-48558032 Msa0552110:intron 20.0%
!! ATCAGCTAATCTTATTAAAA+AGG + chr4_1:48558373-48558392 Msa0552110:CDS 20.0%
!! AAACTAAATCTTCAAACAAT+AGG - chr4_1:48558445-48558464 None:intergenic 20.0%
!! AATGTCAAAATCCATTTAAA+GGG - chr4_1:48568165-48568184 None:intergenic 20.0%
!! AGTTAGTTATCTTAAAATCT+TGG + chr4_1:48582452-48582471 Msa0552110:intron 20.0%
!! GTTAGTTATCTTAAAATCTT+GGG + chr4_1:48582453-48582472 Msa0552110:intron 20.0%
!! TTAGTTATCTTAAAATCTTG+GGG + chr4_1:48582454-48582473 Msa0552110:intron 20.0%
!!! ATTTTATCTGTAGTTGAAAT+TGG + chr4_1:48569255-48569274 Msa0552110:intron 20.0%
!!! TAAAATGCTTTTCAAAACAA+GGG - chr4_1:48569301-48569320 None:intergenic 20.0%
!!! TTTTGAAAAGCATTTTACTT+TGG + chr4_1:48569304-48569323 Msa0552110:intron 20.0%
!!! AATATCTACACAACTTTTTT+GGG - chr4_1:48569542-48569561 None:intergenic 20.0%
!!! AAATATCTACACAACTTTTT+TGG - chr4_1:48569543-48569562 None:intergenic 20.0%
!!! TTTTTGACAAGTTATTTGAA+TGG + chr4_1:48570439-48570458 Msa0552110:intron 20.0%
!!! AGGTGAAAAAGCAAATTTTT+TGG - chr4_1:48553495-48553514 None:intergenic 25.0%
! ATAAAAAAAGATTGACACAC+AGG - chr4_1:48553940-48553959 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48553981-48554000 None:intergenic 25.0%
! TATTCCTAATTATGTAGTTC+TGG + chr4_1:48554205-48554224 Msa0552110:intron 25.0%
! GCAAAAAAAATGTCAAATGT+TGG - chr4_1:48554379-48554398 None:intergenic 25.0%
!!! TTTTTTTTGCTTCTCATTGT+TGG + chr4_1:48554389-48554408 Msa0552110:intron 25.0%
! GAATGTTACATATAGTAAGT+AGG + chr4_1:48554770-48554789 Msa0552110:intron 25.0%
! TAGAGAACAATGAGAAAAAA+GGG - chr4_1:48554948-48554967 None:intergenic 25.0%
! TTAGAGAACAATGAGAAAAA+AGG - chr4_1:48554949-48554968 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG - chr4_1:48555329-48555348 None:intergenic 25.0%
! GTTATTTGCAGTAATGTTTA+AGG + chr4_1:48555422-48555441 Msa0552110:intron 25.0%
! AGGAATAACAAAATCGAAAA+AGG - chr4_1:48555471-48555490 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+CGG - chr4_1:48555523-48555542 None:intergenic 25.0%
! AACCATTGTTCTGTTATAAA+AGG + chr4_1:48555641-48555660 Msa0552110:intron 25.0%
!!! GCTACTCTGTTTTAATTTAT+GGG - chr4_1:48579079-48579098 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG - chr4_1:48579034-48579053 None:intergenic 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG + chr4_1:48555920-48555939 Msa0552110:intron 25.0%
! CAATTTCAAACTGTTCAAAA+GGG - chr4_1:48578621-48578640 None:intergenic 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG - chr4_1:48578553-48578572 None:intergenic 25.0%
! ACATTACAAGGAAAAAAATG+AGG - chr4_1:48556324-48556343 Msa0552120:CDS 25.0%
! ATATTTCAACGAACATTACA+AGG - chr4_1:48578520-48578539 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG + chr4_1:48556368-48556387 Msa0552110:intron 25.0%
! ATAATTTGGCAAATTGTAGA+AGG - chr4_1:48557366-48557385 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG + chr4_1:48557408-48557427 Msa0552110:intron 25.0%
!!! CTTTCTTTTTGAAAAGGTAA+AGG - chr4_1:48557815-48557834 None:intergenic 25.0%
!! TATAAAGTGTCAGTATCTTA+TGG - chr4_1:48557928-48557947 None:intergenic 25.0%
! TAAGATACTGACACTTTATA+TGG + chr4_1:48557928-48557947 Msa0552110:intron 25.0%
! CTGTAAATTTATGTTATGCT+TGG + chr4_1:48557990-48558009 Msa0552110:intron 25.0%
!!! GTTTTTTCAATCTATTCTCA+AGG + chr4_1:48558012-48558031 Msa0552110:intron 25.0%
! AACAAAAACTAAATCTTCAC+GGG - chr4_1:48558342-48558361 None:intergenic 25.0%
! CAACAAAAACTAAATCTTCA+CGG - chr4_1:48558343-48558362 None:intergenic 25.0%
!! AATAATTGATGGTAACTACA+TGG - chr4_1:48558468-48558487 None:intergenic 25.0%
!!! ATTTTTTCATGTTACCAATC+AGG + chr4_1:48558485-48558504 Msa0552110:intron 25.0%
! TATGAGGTTTGATATCAAAA+TGG + chr4_1:48558742-48558761 Msa0552110:intron 25.0%
!! GTGTATGAATTTTTACCAAA+AGG - chr4_1:48558900-48558919 Msa0552130:CDS 25.0%
! CTAAACACTTCAATAAGAAA+TGG - chr4_1:48559023-48559042 Msa0552130:CDS 25.0%
!! CATTTCTTATTGAAGTGTTT+AGG + chr4_1:48559021-48559040 Msa0552110:intron 25.0%
! AAGAATCTCAAATCAGTTTA+AGG - chr4_1:48559123-48559142 Msa0552130:CDS 25.0%
!! CCATTTTCTCTTATATTTGT+TGG - chr4_1:48559266-48559285 Msa0552130:CDS 25.0%
! CCAACAAATATAAGAGAAAA+TGG + chr4_1:48559263-48559282 Msa0552110:intron 25.0%
!! TGTTTTATAATACTATGTGC+AGG - chr4_1:48559302-48559321 Msa0552130:intron 25.0%
! TTCTTCTATTTACTTTCACA+AGG - chr4_1:48559504-48559523 Msa0552130:intron 25.0%
! TTCCATATCATCAATAATTC+GGG - chr4_1:48559723-48559742 Msa0552130:CDS 25.0%
! TCTCACAAAAAAACATATGA+TGG - chr4_1:48559818-48559837 Msa0552130:CDS 25.0%
! TACACTTTATTCAATTGTTC+AGG - chr4_1:48559845-48559864 Msa0552130:intron 25.0%
! AATATCTTAATAAACTGCAG+CGG + chr4_1:48559991-48560010 Msa0552110:intron 25.0%
! TTCAACATCAATGAAAATCT+TGG + chr4_1:48560046-48560065 Msa0552110:intron 25.0%
!! CATAATTATTTTCAGCAACA+AGG + chr4_1:48560399-48560418 Msa0552110:intron 25.0%
! TTTAACCATCCAAATTGTAA+GGG - chr4_1:48560615-48560634 Msa0552130:intron 25.0%
! TATCATCTAATGTCAAAGTT+GGG - chr4_1:48560842-48560861 Msa0552130:CDS 25.0%
!!! TCAAAAGTTAATTGCTTTTG+GGG - chr4_1:48560942-48560961 None:intergenic 25.0%
!! GATCAAAAGTTAATTGCTTT+TGG - chr4_1:48560944-48560963 None:intergenic 25.0%
! AACTTCAAACTTAAGTGTTA+GGG - chr4_1:48561010-48561029 None:intergenic 25.0%
! ATGATAAAAATAGTTCAGGT+GGG - chr4_1:48561105-48561124 None:intergenic 25.0%
! TATGATAAAAATAGTTCAGG+TGG - chr4_1:48561106-48561125 None:intergenic 25.0%
! TAAAATCTGTTGTTGACATT+TGG + chr4_1:48561165-48561184 Msa0552110:intron 25.0%
! TGTATCTTCAAATGGTTATA+AGG + chr4_1:48561207-48561226 Msa0552110:intron 25.0%
!!! GCAGAATAAGTTGTTTTAAT+TGG + chr4_1:48561465-48561484 Msa0552110:intron 25.0%
!!! CTTTTTTTGTTTTGTCACAA+AGG - chr4_1:48561781-48561800 None:intergenic 25.0%
! CTACAAAATTCGGAATAAAA+GGG - chr4_1:48561964-48561983 None:intergenic 25.0%
! ACTACAAAATTCGGAATAAA+AGG - chr4_1:48553547-48553566 None:intergenic 25.0%
!! GGTGAAAAAGCAAATTTTAT+TGG - chr4_1:48562117-48562136 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48553494-48553513 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48553494-48553513 None:intergenic 25.0%
! ATAAAAAAAGATTGACACAC+AGG - chr4_1:48553940-48553959 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48553981-48554000 None:intergenic 25.0%
! TATTCCTAATTATGTAGTTC+TGG + chr4_1:48554205-48554224 Msa0552110:intron 25.0%
! GCAAAAAAAATGTCAAATGT+TGG - chr4_1:48554379-48554398 None:intergenic 25.0%
!!! TTTTTTTTGCTTCTCATTGT+TGG + chr4_1:48554389-48554408 Msa0552110:intron 25.0%
! GAATGTTACATATAGTAAGT+AGG + chr4_1:48554770-48554789 Msa0552110:intron 25.0%
! TAGAGAACAATGAGAAAAAA+GGG - chr4_1:48554948-48554967 None:intergenic 25.0%
! TTAGAGAACAATGAGAAAAA+AGG - chr4_1:48554949-48554968 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG - chr4_1:48555329-48555348 None:intergenic 25.0%
! GTTATTTGCAGTAATGTTTA+AGG + chr4_1:48555422-48555441 Msa0552110:intron 25.0%
! AGGAATAACAAAATCGAAAA+AGG - chr4_1:48555471-48555490 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+CGG - chr4_1:48555523-48555542 None:intergenic 25.0%
! AACCATTGTTCTGTTATAAA+AGG + chr4_1:48555641-48555660 Msa0552110:intron 25.0%
!!! GCTACTCTGTTTTAATTTAT+GGG - chr4_1:48579079-48579098 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG - chr4_1:48579034-48579053 None:intergenic 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG + chr4_1:48555920-48555939 Msa0552110:intron 25.0%
! CAATTTCAAACTGTTCAAAA+GGG - chr4_1:48578621-48578640 None:intergenic 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG - chr4_1:48578553-48578572 None:intergenic 25.0%
! ACATTACAAGGAAAAAAATG+AGG - chr4_1:48556324-48556343 Msa0552120:CDS 25.0%
! ATATTTCAACGAACATTACA+AGG - chr4_1:48578520-48578539 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG + chr4_1:48556368-48556387 Msa0552110:intron 25.0%
! ATAATTTGGCAAATTGTAGA+AGG - chr4_1:48557366-48557385 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG + chr4_1:48557408-48557427 Msa0552110:intron 25.0%
!!! CTTTCTTTTTGAAAAGGTAA+AGG - chr4_1:48557815-48557834 None:intergenic 25.0%
!! TATAAAGTGTCAGTATCTTA+TGG - chr4_1:48557928-48557947 None:intergenic 25.0%
! TAAGATACTGACACTTTATA+TGG + chr4_1:48557928-48557947 Msa0552110:intron 25.0%
! CTGTAAATTTATGTTATGCT+TGG + chr4_1:48557990-48558009 Msa0552110:intron 25.0%
!!! GTTTTTTCAATCTATTCTCA+AGG + chr4_1:48558012-48558031 Msa0552110:intron 25.0%
! AACAAAAACTAAATCTTCAC+GGG - chr4_1:48558342-48558361 None:intergenic 25.0%
! CAACAAAAACTAAATCTTCA+CGG - chr4_1:48558343-48558362 None:intergenic 25.0%
!! AATAATTGATGGTAACTACA+TGG - chr4_1:48558468-48558487 None:intergenic 25.0%
!!! ATTTTTTCATGTTACCAATC+AGG + chr4_1:48558485-48558504 Msa0552110:intron 25.0%
! AGAAAAAAAAAAACTGAGCA+AGG - chr4_1:48567980-48567999 None:intergenic 25.0%
! GAATGTCAAAATCCATTTAA+AGG - chr4_1:48568166-48568185 None:intergenic 25.0%
!! GTTATTTCGATTAAGAACTT+TGG + chr4_1:48568391-48568410 Msa0552110:intron 25.0%
!! CATTTTATATGCATATGAAG+AGG + chr4_1:48568454-48568473 Msa0552110:intron 25.0%
!! TACAATCTTTTCATTTAGTG+TGG + chr4_1:48568684-48568703 Msa0552110:intron 25.0%
!! GTAAAATGCTTTTCAAAACA+AGG - chr4_1:48569302-48569321 None:intergenic 25.0%
! GAACAAAAAAAATAGTGTTC+AGG - chr4_1:48569375-48569394 None:intergenic 25.0%
!!! CACTATTTTTTTTGTTCCTA+TGG + chr4_1:48569378-48569397 Msa0552110:intron 25.0%
!! ATCAGTTTCTAGATTCTAAA+CGG - chr4_1:48569419-48569438 None:intergenic 25.0%
!!! ACTGAAATGTTGATTTAATG+TGG - chr4_1:48569570-48569589 None:intergenic 25.0%
! AAGTGAAGTAAATATTTGTG+CGG + chr4_1:48569593-48569612 Msa0552110:intron 25.0%
! CAATAGTCAATATTGTTCAT+AGG - chr4_1:48569624-48569643 None:intergenic 25.0%
! CTAAGTATAAAAAAACCTCA+TGG + chr4_1:48569664-48569683 Msa0552110:intron 25.0%
! CATTTATTAATCCAAACTTG+TGG + chr4_1:48569896-48569915 Msa0552110:intron 25.0%
! ATTAAAACTTTCCACAAGTT+TGG - chr4_1:48569910-48569929 None:intergenic 25.0%
! GAAACAGGACTAAAAAAAAA+TGG - chr4_1:48569933-48569952 None:intergenic 25.0%
!! TATGGTTGTAGATTATGTTT+TGG + chr4_1:48569966-48569985 Msa0552110:intron 25.0%
! AAATACCTTCAATGCAATTT+CGG + chr4_1:48570119-48570138 Msa0552110:intron 25.0%
! ATGTTCAGGAACAAATTATA+AGG - chr4_1:48570209-48570228 None:intergenic 25.0%
! TGTGTGTTAAAAACAACTAA+TGG + chr4_1:48570922-48570941 Msa0552110:intron 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - chr4_1:48571295-48571314 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr4_1:48571360-48571379 Msa0552110:intron 25.0%
!!! TTTTTTGAAAGAACTAGTTG+GGG - chr4_1:48571790-48571809 None:intergenic 25.0%
! TAATGGAACCCTTATTATAA+GGG + chr4_1:48571825-48571844 Msa0552110:intron 25.0%
! CATATATAGTAACAATGCAT+TGG + chr4_1:48571887-48571906 Msa0552110:intron 25.0%
! TGAATACATAAAAGATTAGG+GGG - chr4_1:48572135-48572154 None:intergenic 25.0%
! GTGAATACATAAAAGATTAG+GGG - chr4_1:48572136-48572155 None:intergenic 25.0%
!!! AATTTAGGGTGAAAGTTTTA+AGG - chr4_1:48572207-48572226 None:intergenic 25.0%
! ACTTATATTGATCACTTCTA+TGG - chr4_1:48572260-48572279 None:intergenic 25.0%
! AGAAGATTATAAATCCATTG+TGG + chr4_1:48572622-48572641 Msa0552110:intron 25.0%
! ACTATAAACATCTGACTTAT+AGG + chr4_1:48572726-48572745 Msa0552110:intron 25.0%
!!! CAAAATTTCTGATTTTGGTT+TGG - chr4_1:48572856-48572875 None:intergenic 25.0%
!! CAAACCAAAATCAGAAATTT+TGG + chr4_1:48572854-48572873 Msa0552110:intron 25.0%
! TATGAGGTTTGATATCAAAA+TGG + chr4_1:48558742-48558761 Msa0552110:intron 25.0%
!! GTGTATGAATTTTTACCAAA+AGG - chr4_1:48558900-48558919 Msa0552130:CDS 25.0%
! CTAAACACTTCAATAAGAAA+TGG - chr4_1:48559023-48559042 Msa0552130:CDS 25.0%
!! CATTTCTTATTGAAGTGTTT+AGG + chr4_1:48559021-48559040 Msa0552110:intron 25.0%
! AAGAATCTCAAATCAGTTTA+AGG - chr4_1:48559123-48559142 Msa0552130:CDS 25.0%
!! CCATTTTCTCTTATATTTGT+TGG - chr4_1:48559266-48559285 Msa0552130:CDS 25.0%
! CCAACAAATATAAGAGAAAA+TGG + chr4_1:48559263-48559282 Msa0552110:intron 25.0%
!! TGTTTTATAATACTATGTGC+AGG - chr4_1:48559302-48559321 Msa0552130:intron 25.0%
! TTCTTCTATTTACTTTCACA+AGG - chr4_1:48559504-48559523 Msa0552130:intron 25.0%
! TTCCATATCATCAATAATTC+GGG - chr4_1:48559723-48559742 Msa0552130:CDS 25.0%
! TCTCACAAAAAAACATATGA+TGG - chr4_1:48559818-48559837 Msa0552130:CDS 25.0%
! TACACTTTATTCAATTGTTC+AGG - chr4_1:48559845-48559864 Msa0552130:intron 25.0%
! AATATCTTAATAAACTGCAG+CGG + chr4_1:48559991-48560010 Msa0552110:intron 25.0%
! TTCAACATCAATGAAAATCT+TGG + chr4_1:48560046-48560065 Msa0552110:intron 25.0%
!! CATAATTATTTTCAGCAACA+AGG + chr4_1:48560399-48560418 Msa0552110:intron 25.0%
! TTTAACCATCCAAATTGTAA+GGG - chr4_1:48560615-48560634 Msa0552130:intron 25.0%
! TATCATCTAATGTCAAAGTT+GGG - chr4_1:48560842-48560861 Msa0552130:CDS 25.0%
!!! TCAAAACTTAATTGCTTTTG+GGG - chr4_1:48575104-48575123 None:intergenic 25.0%
!! GATCAAAACTTAATTGCTTT+TGG - chr4_1:48575106-48575125 None:intergenic 25.0%
! AACTTCAAACTTAAGTGTTA+GGG - chr4_1:48561010-48561029 None:intergenic 25.0%
! ATGATAAAAATAGTTCAGGT+GGG - chr4_1:48561105-48561124 None:intergenic 25.0%
! TATGATAAAAATAGTTCAGG+TGG - chr4_1:48561106-48561125 None:intergenic 25.0%
! TAAAATCTGTTGTTGACATT+TGG + chr4_1:48561165-48561184 Msa0552110:intron 25.0%
! TGTATCTTCAAATGGTTATA+AGG + chr4_1:48561207-48561226 Msa0552110:intron 25.0%
!!! GCAGAATAAGTTGTTTTAAT+TGG + chr4_1:48561465-48561484 Msa0552110:intron 25.0%
!!! CTTTTTTTGTTTTGTCACAA+AGG - chr4_1:48561781-48561800 None:intergenic 25.0%
! CTACAAAATTCGGAATAAAA+GGG - chr4_1:48561964-48561983 None:intergenic 25.0%
! ACTACAAAATTCGGAATAAA+AGG - chr4_1:48553547-48553566 None:intergenic 25.0%
!! GGTGAAAAAGCAAATTTTAT+TGG - chr4_1:48562117-48562136 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48553494-48553513 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48553494-48553513 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:48576969-48576988 Msa0552110:intron 25.0%
! ATAAAAAAAGATTGACACAC+AGG - chr4_1:48553940-48553959 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48553981-48554000 None:intergenic 25.0%
! TATTCCTAATTATGTAGTTC+TGG + chr4_1:48554205-48554224 Msa0552110:intron 25.0%
! GAATGTTACATATAGTAAGT+AGG + chr4_1:48554770-48554789 Msa0552110:intron 25.0%
! TAGAGAACAATGAGAAAAAA+GGG - chr4_1:48554948-48554967 None:intergenic 25.0%
! TTAGAGAACAATGAGAAAAA+AGG - chr4_1:48554949-48554968 None:intergenic 25.0%
! AGGAATAACAAAATCGAAAA+AGG - chr4_1:48555471-48555490 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+CGG - chr4_1:48555523-48555542 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG - chr4_1:48556368-48556387 Msa0552120:CDS 25.0%
! ATATTTCAACGAACATTACA+AGG + chr4_1:48578520-48578539 Msa0552110:three_prime_UTR 25.0%
! AACATTACAAGGAAAAAATG+AGG + chr4_1:48578531-48578550 Msa0552110:three_prime_UTR 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG + chr4_1:48578553-48578572 Msa0552110:three_prime_UTR 25.0%
! CAATTTCAAACTGTTCAAAA+GGG + chr4_1:48578621-48578640 Msa0552110:three_prime_UTR 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG - chr4_1:48555920-48555939 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG + chr4_1:48579034-48579053 Msa0552110:intron 25.0%
!!! GCTACTCTGTTTTAATTTAT+GGG + chr4_1:48579079-48579098 Msa0552110:intron 25.0%
! AACCATTGTTCTGTTATAAA+AGG - chr4_1:48555641-48555660 None:intergenic 25.0%
! ATAATTTGGCAAATTGTAGA+AGG - chr4_1:48557366-48557385 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG + chr4_1:48557408-48557427 Msa0552110:intron 25.0%
!!! CTTTCTTTTTGAAAAGGTAA+AGG - chr4_1:48557815-48557834 None:intergenic 25.0%
!! TATAAAGTGTCAGTATCTTA+TGG - chr4_1:48557928-48557947 None:intergenic 25.0%
! TAAGATACTGACACTTTATA+TGG + chr4_1:48557928-48557947 Msa0552110:intron 25.0%
! CTGTAAATTTATGTTATGCT+TGG + chr4_1:48557990-48558009 Msa0552110:intron 25.0%
!!! GTTTTTTCAATCTATTCTCA+AGG + chr4_1:48558012-48558031 Msa0552110:intron 25.0%
! AACAAAAACTAAATCTTCAC+GGG - chr4_1:48558342-48558361 None:intergenic 25.0%
! CAACAAAAACTAAATCTTCA+CGG - chr4_1:48558343-48558362 None:intergenic 25.0%
!! AATAATTGATGGTAACTACA+TGG - chr4_1:48558468-48558487 None:intergenic 25.0%
!!! ATTTTTTCATGTTACCAATC+AGG + chr4_1:48558485-48558504 Msa0552110:intron 25.0%
! AGAAAAAAAAAAACTGAGCA+AGG - chr4_1:48567980-48567999 None:intergenic 25.0%
! GAATGTCAAAATCCATTTAA+AGG - chr4_1:48568166-48568185 None:intergenic 25.0%
!! GTTATTTCGATTAAGAACTT+TGG + chr4_1:48568391-48568410 Msa0552110:intron 25.0%
!! CATTTTATATGCATATGAAG+AGG + chr4_1:48568454-48568473 Msa0552110:intron 25.0%
!! TACAATCTTTTCATTTAGTG+TGG + chr4_1:48568684-48568703 Msa0552110:intron 25.0%
!! GTAAAATGCTTTTCAAAACA+AGG - chr4_1:48569302-48569321 None:intergenic 25.0%
! GAACAAAAAAAATAGTGTTC+AGG - chr4_1:48569375-48569394 None:intergenic 25.0%
!!! CACTATTTTTTTTGTTCCTA+TGG + chr4_1:48569378-48569397 Msa0552110:intron 25.0%
!! ATCAGTTTCTAGATTCTAAA+CGG - chr4_1:48569419-48569438 None:intergenic 25.0%
!!! ACTGAAATGTTGATTTAATG+TGG - chr4_1:48569570-48569589 None:intergenic 25.0%
! AAGTGAAGTAAATATTTGTG+CGG + chr4_1:48569593-48569612 Msa0552110:intron 25.0%
! CAATAGTCAATATTGTTCAT+AGG - chr4_1:48569624-48569643 None:intergenic 25.0%
! CTAAGTATAAAAAAACCTCA+TGG + chr4_1:48569664-48569683 Msa0552110:intron 25.0%
! CATTTATTAATCCAAACTTG+TGG + chr4_1:48569896-48569915 Msa0552110:intron 25.0%
!! TATGGTTGTAGATTATGTTT+TGG + chr4_1:48569966-48569985 Msa0552110:intron 25.0%
! AAATACCTTCAATGCAATTT+CGG + chr4_1:48570119-48570138 Msa0552110:intron 25.0%
! ATGTTCAGGAACAAATTATA+AGG - chr4_1:48570209-48570228 None:intergenic 25.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48553392-48553411 Msa0552110:five_prime_UTR 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48553393-48553412 Msa0552110:five_prime_UTR 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48553556-48553575 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48553556-48553575 Msa0552110:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48553557-48553576 Msa0552110:intron 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG - chr4_1:48553816-48553835 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TATTCCTAATATTGTAGGTC+TGG + chr4_1:48554037-48554056 Msa0552110:intron 30.0%
AGATCCAGAACTACATAATT+AGG - chr4_1:48554212-48554231 None:intergenic 30.0%
!! AATTATGTAGTTCTGGATCT+AGG + chr4_1:48554212-48554231 Msa0552110:intron 30.0%
!! ATTATGTAGTTCTGGATCTA+GGG + chr4_1:48554213-48554232 Msa0552110:intron 30.0%
ACTTAAACCTTGAAAAGTTG+GGG - chr4_1:48554475-48554494 None:intergenic 30.0%
GACTTAAACCTTGAAAAGTT+GGG - chr4_1:48554476-48554495 None:intergenic 30.0%
TGACTTAAACCTTGAAAAGT+TGG - chr4_1:48554477-48554496 None:intergenic 30.0%
GTTCAGAAAAGAGAAAAAGA+AGG - chr4_1:48554573-48554592 None:intergenic 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG - chr4_1:48554622-48554641 None:intergenic 30.0%
ATTTCCCTTAAATGTCCTTT+GGG - chr4_1:48554677-48554696 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG - chr4_1:48554678-48554697 None:intergenic 30.0%
TATCAAGAACTTAATTTCGG+AGG + chr4_1:48554796-48554815 Msa0552110:intron 30.0%
AATAAGACGAAAGAATGAAC+AGG - chr4_1:48554897-48554916 None:intergenic 30.0%
GAAAAAAGGGAAAAGAGAAA+GGG - chr4_1:48554935-48554954 None:intergenic 30.0%
AGAAAAAAGGGAAAAGAGAA+AGG - chr4_1:48554936-48554955 None:intergenic 30.0%
AACAATGAGAAAAAAGGGAA+AGG - chr4_1:48554943-48554962 None:intergenic 30.0%
CAGAGAACAATGAGAAAAAA+GGG - chr4_1:48555026-48555045 None:intergenic 30.0%
TCAGAGAACAATGAGAAAAA+AGG - chr4_1:48555027-48555046 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr4_1:48555143-48555162 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr4_1:48555377-48555396 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_1:48555378-48555397 Msa0552110:intron 30.0%
!! GTTTTAAATAGCAACTAGAG+TGG - chr4_1:48579238-48579257 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG - chr4_1:48579216-48579235 None:intergenic 30.0%
AGAGGTGAAATGAAAGTTAA+GGG - chr4_1:48579113-48579132 None:intergenic 30.0%
TAGAGGTGAAATGAAAGTTA+AGG - chr4_1:48579112-48579131 None:intergenic 30.0%
!!! GGCTACTCTGTTTTAATTTA+TGG - chr4_1:48579078-48579097 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG - chr4_1:48579044-48579063 None:intergenic 30.0%
CATCAGATGTAAAGAAATGA+TGG + chr4_1:48555855-48555874 Msa0552110:intron 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG - chr4_1:48578857-48578876 None:intergenic 30.0%
! ATGATGAAGAGAGGTATATT+GGG - chr4_1:48578818-48578837 None:intergenic 30.0%
! AATGATGAAGAGAGGTATAT+TGG - chr4_1:48578817-48578836 None:intergenic 30.0%
CCAATTTCAAACTGTTCAAA+AGG - chr4_1:48578620-48578639 None:intergenic 30.0%
!! CCTTTTGAACAGTTTGAAAT+TGG + chr4_1:48556232-48556251 Msa0552110:intron 30.0%
! AAAGAAAGGTGTAATTGCAT+GGG - chr4_1:48556288-48556307 None:intergenic 30.0%
! TAAAGAAAGGTGTAATTGCA+TGG - chr4_1:48556289-48556308 None:intergenic 30.0%
!! AGAGATTTCCATTTTTCTCA+AGG - chr4_1:48556625-48556644 Msa0552120:CDS 30.0%
TATATAAACAGGAAGATACC+AGG - chr4_1:48556793-48556812 Msa0552120:intron 30.0%
ATATAACAATCAGTGAGTTC+TGG - chr4_1:48556880-48556899 Msa0552120:intron 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG - chr4_1:48556917-48556936 Msa0552120:CDS 30.0%
! TTTGTGCAAATTTTTACTGC+AGG - chr4_1:48556954-48556973 Msa0552120:intron 30.0%
CACAAATTTGCACAAATTTG+AGG + chr4_1:48556985-48557004 Msa0552110:intron 30.0%
!!! ATGCTTGTTGTGATTTCTTT+TGG + chr4_1:48557029-48557048 Msa0552110:intron 30.0%
GTACGAATCTATCATCAATT+TGG + chr4_1:48557051-48557070 Msa0552110:intron 30.0%
CAGTAATTCAAAAAGCTCAA+TGG - chr4_1:48557106-48557125 Msa0552120:CDS 30.0%
! TTTTGAATTACTGTCTCGAA+TGG + chr4_1:48557113-48557132 Msa0552110:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG - chr4_1:48557279-48557298 Msa0552120:intron 30.0%
TACAGACATAATTAGCTACA+TGG - chr4_1:48557454-48557473 None:intergenic 30.0%
! TCATAATCTCAAGTCTTATC+TGG + chr4_1:48557572-48557591 Msa0552110:intron 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
!!! TAAGGATGTCTTTTTAGGTT+GGG - chr4_1:48558844-48558863 Msa0552130:CDS 30.0%
!!! ATAAGGATGTCTTTTTAGGT+TGG - chr4_1:48558845-48558864 Msa0552130:CDS 30.0%
! GACAATAAGGATGTCTTTTT+AGG - chr4_1:48558849-48558868 Msa0552130:CDS 30.0%
TGGTAAAAATTCATACACCA+AGG + chr4_1:48558902-48558921 Msa0552110:intron 30.0%
AAAACTATCAAACGAAGTTC+AGG - chr4_1:48559060-48559079 Msa0552130:CDS 30.0%
AATCAGTTTAAGGAAGAACT+GGG - chr4_1:48559113-48559132 Msa0552130:CDS 30.0%
AAATCAGTTTAAGGAAGAAC+TGG - chr4_1:48559114-48559133 Msa0552130:CDS 30.0%
!! TATATCTGCATAAGAGTATC+TGG + chr4_1:48559145-48559164 Msa0552110:intron 30.0%
TTTATAATACTATGTGCAGG+TGG - chr4_1:48559299-48559318 Msa0552130:intron 30.0%
TGGAAGTGAAGGATAATTAT+AGG - chr4_1:48559357-48559376 Msa0552130:intron 30.0%
TCAAAAGAGAAAGTAATTGC+TGG - chr4_1:48559414-48559433 Msa0552130:CDS 30.0%
!!! CACATCTTTCAATTTTTTGC+AGG - chr4_1:48559441-48559460 Msa0552130:intron 30.0%
AAGAATTAGGCAACAATACA+AGG + chr4_1:48559666-48559685 Msa0552110:intron 30.0%
TAATCAGAGTAATCACACAA+CGG + chr4_1:48559902-48559921 Msa0552110:intron 30.0%
TGTTGGATTTATCATTGTTG+AGG - chr4_1:48560101-48560120 Msa0552130:intron 30.0%
CAATGATAAATCCAACAAAG+AGG + chr4_1:48560104-48560123 Msa0552110:intron 30.0%
!! TTTTGAAAAGACCTCTTTGT+TGG - chr4_1:48560118-48560137 Msa0552130:intron 30.0%
TTAACCATCCAAATTGTAAG+GGG - chr4_1:48560614-48560633 Msa0552130:intron 30.0%
CTTTAACCATCCAAATTGTA+AGG - chr4_1:48560616-48560635 Msa0552130:intron 30.0%
ATGTTTATCATTCACCTGTT+GGG - chr4_1:48560657-48560676 Msa0552130:intron 30.0%
AATGTTTATCATTCACCTGT+TGG - chr4_1:48560658-48560677 Msa0552130:intron 30.0%
! GAGTGTGTCATAATTGTTTT+AGG - chr4_1:48560819-48560838 Msa0552130:CDS 30.0%
ATCATCTAATGTCAAAGTTG+GGG - chr4_1:48560841-48560860 Msa0552130:CDS 30.0%
GTATCATCTAATGTCAAAGT+TGG - chr4_1:48560843-48560862 Msa0552130:CDS 30.0%
!! CAAAAGTTAATTGCTTTTGG+GGG - chr4_1:48560941-48560960 None:intergenic 30.0%
!! GATTTAGTTGAGGTGTTTTA+TGG - chr4_1:48560988-48561007 None:intergenic 30.0%
CAACTTCAAACTTAAGTGTT+AGG - chr4_1:48561011-48561030 None:intergenic 30.0%
! CTAACACTTAAGTTTGAAGT+TGG + chr4_1:48561009-48561028 Msa0552110:intron 30.0%
! GAAAACCAACCATAAGTTTT+TGG + chr4_1:48561031-48561050 Msa0552110:intron 30.0%
TTAGTCCAAAAACTTATGGT+TGG - chr4_1:48561039-48561058 None:intergenic 30.0%
CTAGTTAGTCCAAAAACTTA+TGG - chr4_1:48561043-48561062 None:intergenic 30.0%
AAACGTGTTGTATCTTCAAA+TGG + chr4_1:48561199-48561218 Msa0552110:intron 30.0%
!!! TGTGAAATTGTTTTAGTCCA+TGG - chr4_1:48561327-48561346 None:intergenic 30.0%
CTTTGTTCAAAAAACCTAAG+TGG + chr4_1:48561596-48561615 Msa0552110:intron 30.0%
AATAAAGAAGATTACCGATC+TGG - chr4_1:48561752-48561771 None:intergenic 30.0%
!! TTGTTTTGTCACAAAGGATA+AGG - chr4_1:48561775-48561794 None:intergenic 30.0%
CAGGTGAAAACTACAAAATT+CGG - chr4_1:48561974-48561993 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48553556-48553575 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48553556-48553575 Msa0552110:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48553557-48553576 Msa0552110:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48553392-48553411 Msa0552110:five_prime_UTR 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48553393-48553412 Msa0552110:five_prime_UTR 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48553556-48553575 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48553556-48553575 Msa0552110:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48553557-48553576 Msa0552110:intron 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG - chr4_1:48553816-48553835 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TATTCCTAATATTGTAGGTC+TGG + chr4_1:48554037-48554056 Msa0552110:intron 30.0%
AGATCCAGAACTACATAATT+AGG - chr4_1:48554212-48554231 None:intergenic 30.0%
!! AATTATGTAGTTCTGGATCT+AGG + chr4_1:48554212-48554231 Msa0552110:intron 30.0%
!! ATTATGTAGTTCTGGATCTA+GGG + chr4_1:48554213-48554232 Msa0552110:intron 30.0%
ACTTAAACCTTGAAAAGTTG+GGG - chr4_1:48554475-48554494 None:intergenic 30.0%
GACTTAAACCTTGAAAAGTT+GGG - chr4_1:48554476-48554495 None:intergenic 30.0%
TGACTTAAACCTTGAAAAGT+TGG - chr4_1:48554477-48554496 None:intergenic 30.0%
GTTCAGAAAAGAGAAAAAGA+AGG - chr4_1:48554573-48554592 None:intergenic 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG - chr4_1:48554622-48554641 None:intergenic 30.0%
ATTTCCCTTAAATGTCCTTT+GGG - chr4_1:48554677-48554696 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG - chr4_1:48554678-48554697 None:intergenic 30.0%
TATCAAGAACTTAATTTCGG+AGG + chr4_1:48554796-48554815 Msa0552110:intron 30.0%
AATAAGACGAAAGAATGAAC+AGG - chr4_1:48554897-48554916 None:intergenic 30.0%
GAAAAAAGGGAAAAGAGAAA+GGG - chr4_1:48554935-48554954 None:intergenic 30.0%
AGAAAAAAGGGAAAAGAGAA+AGG - chr4_1:48554936-48554955 None:intergenic 30.0%
AACAATGAGAAAAAAGGGAA+AGG - chr4_1:48554943-48554962 None:intergenic 30.0%
CAGAGAACAATGAGAAAAAA+GGG - chr4_1:48555026-48555045 None:intergenic 30.0%
TCAGAGAACAATGAGAAAAA+AGG - chr4_1:48555027-48555046 None:intergenic 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr4_1:48555143-48555162 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr4_1:48555377-48555396 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_1:48555378-48555397 Msa0552110:intron 30.0%
!! GTTTTAAATAGCAACTAGAG+TGG - chr4_1:48579238-48579257 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG - chr4_1:48579216-48579235 None:intergenic 30.0%
AGAGGTGAAATGAAAGTTAA+GGG - chr4_1:48579113-48579132 None:intergenic 30.0%
TAGAGGTGAAATGAAAGTTA+AGG - chr4_1:48579112-48579131 None:intergenic 30.0%
!!! GGCTACTCTGTTTTAATTTA+TGG - chr4_1:48579078-48579097 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG - chr4_1:48579044-48579063 None:intergenic 30.0%
CATCAGATGTAAAGAAATGA+TGG + chr4_1:48555855-48555874 Msa0552110:intron 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG - chr4_1:48578857-48578876 None:intergenic 30.0%
! ATGATGAAGAGAGGTATATT+GGG - chr4_1:48578818-48578837 None:intergenic 30.0%
! AATGATGAAGAGAGGTATAT+TGG - chr4_1:48578817-48578836 None:intergenic 30.0%
CCAATTTCAAACTGTTCAAA+AGG - chr4_1:48578620-48578639 None:intergenic 30.0%
!! CCTTTTGAACAGTTTGAAAT+TGG + chr4_1:48556232-48556251 Msa0552110:intron 30.0%
! AAAGAAAGGTGTAATTGCAT+GGG - chr4_1:48556288-48556307 None:intergenic 30.0%
! TAAAGAAAGGTGTAATTGCA+TGG - chr4_1:48556289-48556308 None:intergenic 30.0%
!! AGAGATTTCCATTTTTCTCA+AGG - chr4_1:48556625-48556644 Msa0552120:CDS 30.0%
TATATAAACAGGAAGATACC+AGG - chr4_1:48556793-48556812 Msa0552120:intron 30.0%
ATATAACAATCAGTGAGTTC+TGG - chr4_1:48556880-48556899 Msa0552120:intron 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG - chr4_1:48556917-48556936 Msa0552120:CDS 30.0%
! TTTGTGCAAATTTTTACTGC+AGG - chr4_1:48556954-48556973 Msa0552120:intron 30.0%
CACAAATTTGCACAAATTTG+AGG + chr4_1:48556985-48557004 Msa0552110:intron 30.0%
!!! ATGCTTGTTGTGATTTCTTT+TGG + chr4_1:48557029-48557048 Msa0552110:intron 30.0%
GTACGAATCTATCATCAATT+TGG + chr4_1:48557051-48557070 Msa0552110:intron 30.0%
CAGTAATTCAAAAAGCTCAA+TGG - chr4_1:48557106-48557125 Msa0552120:CDS 30.0%
! TTTTGAATTACTGTCTCGAA+TGG + chr4_1:48557113-48557132 Msa0552110:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG - chr4_1:48557279-48557298 Msa0552120:intron 30.0%
TACAGACATAATTAGCTACA+TGG - chr4_1:48557454-48557473 None:intergenic 30.0%
! TCATAATCTCAAGTCTTATC+TGG + chr4_1:48557572-48557591 Msa0552110:intron 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
! TTATGAAACTTTAAGAGCTC+TGG + chr4_1:48568015-48568034 Msa0552110:intron 30.0%
TGTTATTACCTCCCTTTAAA+TGG + chr4_1:48568151-48568170 Msa0552110:intron 30.0%
! ATAGTGAATTTCATTTTCCG+AGG - chr4_1:48568234-48568253 None:intergenic 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG + chr4_1:48568285-48568304 Msa0552110:intron 30.0%
!!! ATTGAAATGCTGATTTTCAC+TGG + chr4_1:48568365-48568384 Msa0552110:intron 30.0%
GTAATAATAGGCATCACTAA+AGG - chr4_1:48568419-48568438 None:intergenic 30.0%
ACACGACATAGAGTAATAAT+AGG - chr4_1:48568431-48568450 None:intergenic 30.0%
AATGTTGTATACTCGTCATA+CGG - chr4_1:48568641-48568660 None:intergenic 30.0%
! GATTCATTTCTTTTCGTTTG+TGG + chr4_1:48568723-48568742 Msa0552110:intron 30.0%
CGTGTATTCTTTGTATGTAT+TGG + chr4_1:48569013-48569032 Msa0552110:intron 30.0%
TGATTATGTGAGAAGAAATC+TGG + chr4_1:48569051-48569070 Msa0552110:intron 30.0%
ATCTAACATAGGGTTTACAA+AGG + chr4_1:48569083-48569102 Msa0552110:intron 30.0%
TCTAACATAGGGTTTACAAA+GGG + chr4_1:48569084-48569103 Msa0552110:intron 30.0%
AACTTAATGAGAACGAAAAC+AGG + chr4_1:48569160-48569179 Msa0552110:intron 30.0%
! TCAGTTTCTAGATTCTAAAC+GGG - chr4_1:48569418-48569437 None:intergenic 30.0%
CAAGGAAAAAACTAGATTAG+GGG - chr4_1:48569519-48569538 None:intergenic 30.0%
GCAAGGAAAAAACTAGATTA+GGG - chr4_1:48569520-48569539 None:intergenic 30.0%
!! TGTTTTTATCTTGTAGTCTC+AGG + chr4_1:48569738-48569757 Msa0552110:intron 30.0%
AAATACATAATTGAGCGCAA+TGG - chr4_1:48570306-48570325 None:intergenic 30.0%
TTGACAAGTTATTTGAATGG+TGG + chr4_1:48570442-48570461 Msa0552110:intron 30.0%
CAAAAGAACTTGCAATTAAG+CGG - chr4_1:48570472-48570491 None:intergenic 30.0%
TTATCATCACTATCATCACT+GGG - chr4_1:48570497-48570516 None:intergenic 30.0%
TTTATCATCACTATCATCAC+TGG - chr4_1:48570498-48570517 None:intergenic 30.0%
! TGATGATAGTGATGATAAAG+CGG + chr4_1:48570499-48570518 Msa0552110:intron 30.0%
TGACATTGAATGCTATCAAA+AGG - chr4_1:48570535-48570554 None:intergenic 30.0%
AGTATATGGATAGGCTTATT+AGG - chr4_1:48570810-48570829 None:intergenic 30.0%
GATTGAGTAAGGACTAATAT+TGG + chr4_1:48571371-48571390 Msa0552110:intron 30.0%
!!! TGGATGCAGAAATTTTTTGT+AGG + chr4_1:48571391-48571410 Msa0552110:intron 30.0%
!!! GGATGCAGAAATTTTTTGTA+GGG + chr4_1:48571392-48571411 Msa0552110:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr4_1:48571436-48571455 Msa0552110:intron 30.0%
CTAATGGAACCCTTATTATA+AGG + chr4_1:48571824-48571843 Msa0552110:intron 30.0%
TTGTGAAGTCAACTCTTTAA+AGG + chr4_1:48571913-48571932 Msa0552110:intron 30.0%
ATCTCAACTTCACTCTATTT+CGG + chr4_1:48572348-48572367 Msa0552110:intron 30.0%
AAGTCAGATGTTTATAGTTG+CGG - chr4_1:48572724-48572743 None:intergenic 30.0%
!! GAGGTATTTTCTAGAAACTT+TGG - chr4_1:48572760-48572779 None:intergenic 30.0%
TGACACAATACTTCTTTCTT+TGG + chr4_1:48572818-48572837 Msa0552110:intron 30.0%
!! TCTTTCTTTGGAACAAAGTT+TGG + chr4_1:48572830-48572849 Msa0552110:intron 30.0%
! ACACCCAAAATTTCTGATTT+TGG - chr4_1:48572861-48572880 None:intergenic 30.0%
!!! TAAGGATGTCTTTTTAGGTT+GGG - chr4_1:48558844-48558863 Msa0552130:CDS 30.0%
!!! ATAAGGATGTCTTTTTAGGT+TGG - chr4_1:48558845-48558864 Msa0552130:CDS 30.0%
! GACAATAAGGATGTCTTTTT+AGG - chr4_1:48558849-48558868 Msa0552130:CDS 30.0%
TGGTAAAAATTCATACACCA+AGG + chr4_1:48558902-48558921 Msa0552110:intron 30.0%
AAAACTATCAAACGAAGTTC+AGG - chr4_1:48559060-48559079 Msa0552130:CDS 30.0%
AATCAGTTTAAGGAAGAACT+GGG - chr4_1:48559113-48559132 Msa0552130:CDS 30.0%
AAATCAGTTTAAGGAAGAAC+TGG - chr4_1:48559114-48559133 Msa0552130:CDS 30.0%
!! TATATCTGCATAAGAGTATC+TGG + chr4_1:48559145-48559164 Msa0552110:intron 30.0%
TTTATAATACTATGTGCAGG+TGG - chr4_1:48559299-48559318 Msa0552130:intron 30.0%
TGGAAGTGAAGGATAATTAT+AGG - chr4_1:48559357-48559376 Msa0552130:intron 30.0%
TCAAAAGAGAAAGTAATTGC+TGG - chr4_1:48559414-48559433 Msa0552130:CDS 30.0%
!!! CACATCTTTCAATTTTTTGC+AGG - chr4_1:48559441-48559460 Msa0552130:intron 30.0%
AAGAATTAGGCAACAATACA+AGG + chr4_1:48559666-48559685 Msa0552110:intron 30.0%
TAATCAGAGTAATCACACAA+CGG + chr4_1:48559902-48559921 Msa0552110:intron 30.0%
TGTTGGATTTATCATTGTTG+AGG - chr4_1:48560101-48560120 Msa0552130:intron 30.0%
CAATGATAAATCCAACAAAG+AGG + chr4_1:48560104-48560123 Msa0552110:intron 30.0%
!! TTTTGAAAAGACCTCTTTGT+TGG - chr4_1:48560118-48560137 Msa0552130:intron 30.0%
TTAACCATCCAAATTGTAAG+GGG - chr4_1:48560614-48560633 Msa0552130:intron 30.0%
CTTTAACCATCCAAATTGTA+AGG - chr4_1:48560616-48560635 Msa0552130:intron 30.0%
ATGTTTATCATTCACCTGTT+GGG - chr4_1:48560657-48560676 Msa0552130:intron 30.0%
AATGTTTATCATTCACCTGT+TGG - chr4_1:48560658-48560677 Msa0552130:intron 30.0%
! GAGTGTGTCATAATTGTTTT+AGG - chr4_1:48560819-48560838 Msa0552130:CDS 30.0%
ATCATCTAATGTCAAAGTTG+GGG - chr4_1:48560841-48560860 Msa0552130:CDS 30.0%
GTATCATCTAATGTCAAAGT+TGG - chr4_1:48560843-48560862 Msa0552130:CDS 30.0%
!! CAAAACTTAATTGCTTTTGG+GGG - chr4_1:48575103-48575122 None:intergenic 30.0%
!! GATTTAGTTGAGGTGTTTTA+TGG - chr4_1:48560988-48561007 None:intergenic 30.0%
CAACTTCAAACTTAAGTGTT+AGG - chr4_1:48561011-48561030 None:intergenic 30.0%
! CTAACACTTAAGTTTGAAGT+TGG + chr4_1:48561009-48561028 Msa0552110:intron 30.0%
! GAAAACCAACCATAAGTTTT+TGG + chr4_1:48561031-48561050 Msa0552110:intron 30.0%
TTAGTCCAAAAACTTATGGT+TGG - chr4_1:48561039-48561058 None:intergenic 30.0%
CTAGTTAGTCCAAAAACTTA+TGG - chr4_1:48561043-48561062 None:intergenic 30.0%
AAACGTGTTGTATCTTCAAA+TGG + chr4_1:48561199-48561218 Msa0552110:intron 30.0%
!!! TGTGAAATTGTTTTAGTCCA+TGG - chr4_1:48561327-48561346 None:intergenic 30.0%
CTTTGTTCAAAAAACCTAAG+TGG + chr4_1:48561596-48561615 Msa0552110:intron 30.0%
AATAAAGAAGATTACCGATC+TGG - chr4_1:48561752-48561771 None:intergenic 30.0%
!! TTGTTTTGTCACAAAGGATA+AGG - chr4_1:48561775-48561794 None:intergenic 30.0%
CAGGTGAAAACTACAAAATT+CGG - chr4_1:48561974-48561993 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48553556-48553575 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48553556-48553575 Msa0552110:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48553557-48553576 Msa0552110:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48553392-48553411 Msa0552110:five_prime_UTR 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48553393-48553412 Msa0552110:five_prime_UTR 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48553549-48553568 Msa0552110:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48553556-48553575 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48553556-48553575 Msa0552110:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48553557-48553576 Msa0552110:intron 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG - chr4_1:48553816-48553835 None:intergenic 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:48577135-48577154 Msa0552110:intron 30.0%
AGATCCAGAACTACATAATT+AGG - chr4_1:48554212-48554231 None:intergenic 30.0%
!! AATTATGTAGTTCTGGATCT+AGG + chr4_1:48554212-48554231 Msa0552110:intron 30.0%
!! ATTATGTAGTTCTGGATCTA+GGG + chr4_1:48554213-48554232 Msa0552110:intron 30.0%
ACTTAAACCTTGAAAAGTTG+GGG - chr4_1:48554475-48554494 None:intergenic 30.0%
GACTTAAACCTTGAAAAGTT+GGG - chr4_1:48554476-48554495 None:intergenic 30.0%
TGACTTAAACCTTGAAAAGT+TGG - chr4_1:48554477-48554496 None:intergenic 30.0%
GTTCAGAAAAGAGAAAAAGA+AGG - chr4_1:48554573-48554592 None:intergenic 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG - chr4_1:48554622-48554641 None:intergenic 30.0%
ATTTCCCTTAAATGTCCTTT+GGG - chr4_1:48554677-48554696 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG - chr4_1:48554678-48554697 None:intergenic 30.0%
TATCAAGAACTTAATTTCGG+AGG + chr4_1:48554796-48554815 Msa0552110:intron 30.0%
AATAAGACGAAAGAATGAAC+AGG - chr4_1:48554897-48554916 None:intergenic 30.0%
GAAAAAAGGGAAAAGAGAAA+GGG - chr4_1:48554935-48554954 None:intergenic 30.0%
AGAAAAAAGGGAAAAGAGAA+AGG - chr4_1:48554936-48554955 None:intergenic 30.0%
AACAATGAGAAAAAAGGGAA+AGG - chr4_1:48554943-48554962 None:intergenic 30.0%
CAGAGAACAATGAGAAAAAA+GGG - chr4_1:48555026-48555045 None:intergenic 30.0%
TCAGAGAACAATGAGAAAAA+AGG - chr4_1:48555027-48555046 None:intergenic 30.0%
! TAAAGAAAGGTGTATTTGCA+TGG + chr4_1:48578566-48578585 Msa0552110:three_prime_UTR 30.0%
! AAAGAAAGGTGTATTTGCAT+GGG + chr4_1:48578567-48578586 Msa0552110:three_prime_UTR 30.0%
!! CCTTTTGAACAGTTTGAAAT+TGG - chr4_1:48556232-48556251 None:intergenic 30.0%
CCAATTTCAAACTGTTCAAA+AGG + chr4_1:48578620-48578639 Msa0552110:three_prime_UTR 30.0%
! AATGATGAAGAGAGGTATAT+TGG + chr4_1:48578817-48578836 Msa0552110:three_prime_UTR 30.0%
! ATGATGAAGAGAGGTATATT+GGG + chr4_1:48578818-48578837 Msa0552110:three_prime_UTR 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG + chr4_1:48578857-48578876 Msa0552110:three_prime_UTR 30.0%
CATCAGATGTAAAGAAATGA+TGG - chr4_1:48555855-48555874 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG + chr4_1:48579044-48579063 Msa0552110:intron 30.0%
!!! GGCTACTCTGTTTTAATTTA+TGG + chr4_1:48579078-48579097 Msa0552110:intron 30.0%
TAGAGGTGAAATGAAAGTTA+AGG + chr4_1:48579112-48579131 Msa0552110:intron 30.0%
AGAGGTGAAATGAAAGTTAA+GGG + chr4_1:48579113-48579132 Msa0552110:intron 30.0%
! CACCTTTTATAACAGAACAA+TGG + chr4_1:48579216-48579235 Msa0552110:intron 30.0%
!! GTTTTAAATAGCAACTAGAG+TGG + chr4_1:48579238-48579257 Msa0552110:intron 30.0%
!! AGAGATTTCCATTTTTCTCA+AGG - chr4_1:48556625-48556644 Msa0552120:CDS 30.0%
TATATAAACAGGAAGATACC+AGG - chr4_1:48556793-48556812 Msa0552120:intron 30.0%
ATATAACAATCAGTGAGTTC+TGG - chr4_1:48556880-48556899 Msa0552120:intron 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG - chr4_1:48556917-48556936 Msa0552120:CDS 30.0%
! TTTGTGCAAATTTTTACTGC+AGG - chr4_1:48556954-48556973 Msa0552120:intron 30.0%
CACAAATTTGCACAAATTTG+AGG + chr4_1:48556985-48557004 Msa0552110:intron 30.0%
!!! ATGCTTGTTGTGATTTCTTT+TGG + chr4_1:48557029-48557048 Msa0552110:intron 30.0%
GTACGAATCTATCATCAATT+TGG + chr4_1:48557051-48557070 Msa0552110:intron 30.0%
CAGTAATTCAAAAAGCTCAA+TGG - chr4_1:48557106-48557125 Msa0552120:CDS 30.0%
! TTTTGAATTACTGTCTCGAA+TGG + chr4_1:48557113-48557132 Msa0552110:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG - chr4_1:48557279-48557298 Msa0552120:intron 30.0%
TACAGACATAATTAGCTACA+TGG - chr4_1:48557454-48557473 None:intergenic 30.0%
! TCATAATCTCAAGTCTTATC+TGG + chr4_1:48557572-48557591 Msa0552110:intron 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48558266-48558285 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48558267-48558286 None:intergenic 30.0%
! TTATGAAACTTTAAGAGCTC+TGG + chr4_1:48568015-48568034 Msa0552110:intron 30.0%
TGTTATTACCTCCCTTTAAA+TGG + chr4_1:48568151-48568170 Msa0552110:intron 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG + chr4_1:48568285-48568304 Msa0552110:intron 30.0%
!!! ATTGAAATGCTGATTTTCAC+TGG + chr4_1:48568365-48568384 Msa0552110:intron 30.0%
GTAATAATAGGCATCACTAA+AGG - chr4_1:48568419-48568438 None:intergenic 30.0%
ACACGACATAGAGTAATAAT+AGG - chr4_1:48568431-48568450 None:intergenic 30.0%
AATGTTGTATACTCGTCATA+CGG - chr4_1:48568641-48568660 None:intergenic 30.0%
! GATTCATTTCTTTTCGTTTG+TGG + chr4_1:48568723-48568742 Msa0552110:intron 30.0%
CGTGTATTCTTTGTATGTAT+TGG + chr4_1:48569013-48569032 Msa0552110:intron 30.0%
TGATTATGTGAGAAGAAATC+TGG + chr4_1:48569051-48569070 Msa0552110:intron 30.0%
ATCTAACATAGGGTTTACAA+AGG + chr4_1:48569083-48569102 Msa0552110:intron 30.0%
TCTAACATAGGGTTTACAAA+GGG + chr4_1:48569084-48569103 Msa0552110:intron 30.0%
AACTTAATGAGAACGAAAAC+AGG + chr4_1:48569160-48569179 Msa0552110:intron 30.0%
! TCAGTTTCTAGATTCTAAAC+GGG - chr4_1:48569418-48569437 None:intergenic 30.0%
CAAGGAAAAAACTAGATTAG+GGG - chr4_1:48569519-48569538 None:intergenic 30.0%
GCAAGGAAAAAACTAGATTA+GGG - chr4_1:48569520-48569539 None:intergenic 30.0%
! ATTTTATCTCAATGTGCTAC+TGG + chr4_1:48569704-48569723 Msa0552110:intron 30.0%
!! TGTTTTTATCTTGTAGTCTC+AGG + chr4_1:48569738-48569757 Msa0552110:intron 30.0%
ATTACAACTTTCCACAAGTT+TGG - chr4_1:48583770-48583789 None:intergenic 30.0%
GAAACAGGACTAAAAACAAA+TGG - chr4_1:48583793-48583812 None:intergenic 30.0%
TGTGTTTATTGAAGTTACTG+TGG - chr4_1:48583916-48583935 None:intergenic 30.0%
AAATACATAATTGAGCGCAA+TGG - chr4_1:48570306-48570325 None:intergenic 30.0%
TTGACAAGTTATTTGAATGG+TGG + chr4_1:48570442-48570461 Msa0552110:intron 30.0%
CAAAAGAACTTGCAATTAAG+CGG - chr4_1:48570472-48570491 None:intergenic 30.0%
TGACATTGAATGCTATCAAA+AGG - chr4_1:48570535-48570554 None:intergenic 30.0%
GTACAGGTGAAAACTTAATG+AGG - chr4_1:48553672-48553691 None:intergenic 35.0%
! TATTCCGCATTTTGTAGTTC+TGG + chr4_1:48553706-48553725 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48553714-48553733 Msa0552110:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48553829-48553848 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:48553837-48553856 None:intergenic 35.0%
GGATCCAGAACTACAAAATT+CGG - chr4_1:48553878-48553897 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCC+AGG + chr4_1:48553878-48553897 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCCA+GGG + chr4_1:48553879-48553898 Msa0552110:intron 35.0%
CAGAATCTGCTCTTCAATTA+CGG - chr4_1:48554417-48554436 None:intergenic 35.0%
CTTAAACCTTGAAAAGTTGG+GGG - chr4_1:48554474-48554493 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG + chr4_1:48554659-48554678 Msa0552110:intron 35.0%
TAACACCCAAAGGACATTTA+AGG + chr4_1:48554669-48554688 Msa0552110:intron 35.0%
AACACCCAAAGGACATTTAA+GGG + chr4_1:48554670-48554689 Msa0552110:intron 35.0%
ACAAGTAGCGTTTAAAGAAC+TGG + chr4_1:48554743-48554762 Msa0552110:intron 35.0%
GGAAAGCAGTAAAGAAAACA+AGG - chr4_1:48554992-48555011 None:intergenic 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG - chr4_1:48555013-48555032 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG - chr4_1:48555014-48555033 None:intergenic 35.0%
TCTGTTCAGAAGAGTAAACA+AGG - chr4_1:48555067-48555086 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr4_1:48555243-48555262 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr4_1:48555247-48555266 None:intergenic 35.0%
TTATGGGTTTCATGTGATAG+AGG - chr4_1:48579095-48579114 None:intergenic 35.0%
TTGAAATTGGTATGGCTAGT+TGG - chr4_1:48579057-48579076 None:intergenic 35.0%
! CTGATTGGTTGAAATTGGTA+TGG - chr4_1:48579049-48579068 None:intergenic 35.0%
CACAAATAAGAGGTTAAGGT+TGG - chr4_1:48578903-48578922 None:intergenic 35.0%
! AGAAAAGGTGCACAAATAAG+AGG - chr4_1:48578893-48578912 None:intergenic 35.0%
AGAAGCTTAATGATGAAGAG+AGG - chr4_1:48578809-48578828 None:intergenic 35.0%
! GATATTAGCTTATGGCCATT+TGG - chr4_1:48578456-48578475 None:intergenic 35.0%
TGGCCATAAGCTAATATCTT+AGG + chr4_1:48556402-48556421 Msa0552110:intron 35.0%
! CAGCCTAAGATATTAGCTTA+TGG - chr4_1:48578448-48578467 None:intergenic 35.0%
! AACTCCCAAACTTTCTTTTG+AGG + chr4_1:48556910-48556929 Msa0552110:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG - chr4_1:48556918-48556937 Msa0552120:CDS 35.0%
TGGAAAATCTCAGAAGCTAT+TGG - chr4_1:48557086-48557105 Msa0552120:CDS 35.0%
TACGATGCAGATAAAAGAAC+CGG - chr4_1:48557165-48557184 Msa0552120:intron 35.0%
ATTACACTCTTTAGTCCACA+TGG + chr4_1:48557189-48557208 Msa0552110:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG + chr4_1:48557201-48557220 Msa0552110:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG - chr4_1:48557207-48557226 Msa0552120:intron 35.0%
GATTCTGCTTTATAACTGAG+GGG - chr4_1:48557278-48557297 Msa0552120:intron 35.0%
CTGATTCTGCTTTATAACTG+AGG - chr4_1:48557280-48557299 Msa0552120:intron 35.0%
ACATAATTAGCTACATGGTG+TGG - chr4_1:48557449-48557468 None:intergenic 35.0%
TTACACTATTTGAGCTTTGC+AGG + chr4_1:48557523-48557542 Msa0552110:intron 35.0%
GAGATTATGACATAGATGCA+AGG - chr4_1:48557562-48557581 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG - chr4_1:48557603-48557622 None:intergenic 35.0%
TCAGAAGGTAGAAGTTGTAT+TGG + chr4_1:48557757-48557776 Msa0552110:five_prime_UTR 35.0%
! ACCTTTTCAAAAAGAAAGCG+CGG + chr4_1:48557817-48557836 Msa0552110:five_prime_UTR 35.0%
TCTCAGTGATCATACTCTTA+AGG + chr4_1:48558110-48558129 Msa0552110:intron 35.0%
TAAAGTAAGTAGTCTTCCCT+CGG - chr4_1:48558304-48558323 None:intergenic 35.0%
GAAGACTACTTACTTTACAC+TGG + chr4_1:48558307-48558326 Msa0552110:CDS 35.0%
!! TTACTTTACACTGGCTTTCT+TGG + chr4_1:48558316-48558335 Msa0552110:CDS 35.0%
TAGGAAGACTAAATGATAGC+AGG - chr4_1:48558426-48558445 None:intergenic 35.0%
TTTCATGTTACCAATCAGGA+TGG + chr4_1:48558489-48558508 Msa0552110:intron 35.0%
TCGTCTAGCAATACATTATG+AGG + chr4_1:48558726-48558745 Msa0552110:intron 35.0%
GGAATTGAGTATCTTCATCA+AGG - chr4_1:48558786-48558805 Msa0552130:CDS 35.0%
TGAAGATACTCAATTCCCTT+CGG + chr4_1:48558789-48558808 Msa0552110:intron 35.0%
ATTTCTCTTGGTATACCGAA+GGG - chr4_1:48558807-48558826 Msa0552130:CDS 35.0%
AGGCTTCAAAACATTTCTCT+TGG - chr4_1:48558819-48558838 Msa0552130:CDS 35.0%
! AAATTCTGCAACGAACCTTT+TGG + chr4_1:48558882-48558901 Msa0552110:intron 35.0%
TCAAATTCATCATGTCAACG+TGG - chr4_1:48558967-48558986 Msa0552130:CDS 35.0%
CCAAGAGTTCATCAATGAAA+TGG - chr4_1:48559000-48559019 Msa0552130:CDS 35.0%
CCATTTCATTGATGAACTCT+TGG + chr4_1:48558997-48559016 Msa0552110:intron 35.0%
! GCTTTTGGATATGTCTTCAA+AGG - chr4_1:48559083-48559102 Msa0552130:CDS 35.0%
ATCAGTTTAAGGAAGAACTG+GGG - chr4_1:48559112-48559131 Msa0552130:CDS 35.0%
ATATAAGAGAAAATGGGCCT+AGG + chr4_1:48559270-48559289 Msa0552110:intron 35.0%
! ATGTGTCACTCATTGTGAAA+CGG + chr4_1:48559456-48559475 Msa0552110:intron 35.0%
TTTAACAACAACGTTGATGC+GGG - chr4_1:48559644-48559663 Msa0552130:CDS 35.0%
GTTTAACAACAACGTTGATG+CGG - chr4_1:48559645-48559664 Msa0552130:CDS 35.0%
! TGCCCGAATTATTGATGATA+TGG + chr4_1:48559718-48559737 Msa0552110:intron 35.0%
ACTGCTATAACTTCAAATCC+CGG + chr4_1:48559746-48559765 Msa0552110:intron 35.0%
CAATGAAAATCTTGGCACAA+AGG + chr4_1:48560054-48560073 Msa0552110:intron 35.0%
GGATAATGTCTATTACGTTG+AGG - chr4_1:48560080-48560099 Msa0552130:intron 35.0%
! TGATGACTTGTATGTTTGGT+CGG - chr4_1:48560219-48560238 Msa0552130:intron 35.0%
! GTACTGATGACTTGTATGTT+TGG - chr4_1:48560223-48560242 Msa0552130:intron 35.0%
TGTTTATCATTCACCTGTTG+GGG - chr4_1:48560656-48560675 Msa0552130:intron 35.0%
AGGTGAATGATAAACATTCC+AGG + chr4_1:48560660-48560679 Msa0552110:intron 35.0%
GGTGAATGATAAACATTCCA+GGG + chr4_1:48560661-48560680 Msa0552110:intron 35.0%
GTTGAATGATGAACATTCCA+GGG + chr4_1:48560700-48560719 Msa0552110:intron 35.0%
TTTGCATACTCACATCTGTT+GGG - chr4_1:48560734-48560753 Msa0552130:intron 35.0%
ATTTGCATACTCACATCTGT+TGG - chr4_1:48560735-48560754 Msa0552130:intron 35.0%
AACAGATGTGAGTATGCAAA+TGG + chr4_1:48560734-48560753 Msa0552110:intron 35.0%
TGATACAACAACGTCAACAA+CGG + chr4_1:48560857-48560876 Msa0552110:intron 35.0%
AAGTGTTAGGGATTTAGTTG+AGG - chr4_1:48560998-48561017 None:intergenic 35.0%
GTAGTGATGTGTGAAACTAT+TGG - chr4_1:48561302-48561321 None:intergenic 35.0%
!! CTTCTTTTGAAGAACCAGAT+CGG + chr4_1:48561735-48561754 Msa0552110:three_prime_UTR 35.0%
TTTGAAAACCCAGATCTATC+TGG + chr4_1:48561821-48561840 Msa0552110:intron 35.0%
ACAAAAGAGATTATCCGATC+TGG - chr4_1:48561894-48561913 None:intergenic 35.0%
! TATTCCGAATTTTGTAGCTC+TGG + chr4_1:48562011-48562030 Msa0552110:intron 35.0%
GTACATGTGAAAACTGAATG+AGG - chr4_1:48562138-48562157 None:intergenic 35.0%
GTACAGGTGAAAACTTAATG+AGG - chr4_1:48553672-48553691 None:intergenic 35.0%
! TATTCCGCATTTTGTAGTTC+TGG + chr4_1:48553706-48553725 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48553714-48553733 Msa0552110:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48553829-48553848 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:48553837-48553856 None:intergenic 35.0%
GGATCCAGAACTACAAAATT+CGG - chr4_1:48553878-48553897 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCC+AGG + chr4_1:48553878-48553897 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCCA+GGG + chr4_1:48553879-48553898 Msa0552110:intron 35.0%
CAGAATCTGCTCTTCAATTA+CGG - chr4_1:48554417-48554436 None:intergenic 35.0%
CTTAAACCTTGAAAAGTTGG+GGG - chr4_1:48554474-48554493 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG + chr4_1:48554659-48554678 Msa0552110:intron 35.0%
TAACACCCAAAGGACATTTA+AGG + chr4_1:48554669-48554688 Msa0552110:intron 35.0%
AACACCCAAAGGACATTTAA+GGG + chr4_1:48554670-48554689 Msa0552110:intron 35.0%
ACAAGTAGCGTTTAAAGAAC+TGG + chr4_1:48554743-48554762 Msa0552110:intron 35.0%
GGAAAGCAGTAAAGAAAACA+AGG - chr4_1:48554992-48555011 None:intergenic 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG - chr4_1:48555013-48555032 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG - chr4_1:48555014-48555033 None:intergenic 35.0%
TCTGTTCAGAAGAGTAAACA+AGG - chr4_1:48555067-48555086 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr4_1:48555243-48555262 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr4_1:48555247-48555266 None:intergenic 35.0%
TTATGGGTTTCATGTGATAG+AGG - chr4_1:48579095-48579114 None:intergenic 35.0%
TTGAAATTGGTATGGCTAGT+TGG - chr4_1:48579057-48579076 None:intergenic 35.0%
! CTGATTGGTTGAAATTGGTA+TGG - chr4_1:48579049-48579068 None:intergenic 35.0%
CACAAATAAGAGGTTAAGGT+TGG - chr4_1:48578903-48578922 None:intergenic 35.0%
! AGAAAAGGTGCACAAATAAG+AGG - chr4_1:48578893-48578912 None:intergenic 35.0%
AGAAGCTTAATGATGAAGAG+AGG - chr4_1:48578809-48578828 None:intergenic 35.0%
! GATATTAGCTTATGGCCATT+TGG - chr4_1:48578456-48578475 None:intergenic 35.0%
TGGCCATAAGCTAATATCTT+AGG + chr4_1:48556402-48556421 Msa0552110:intron 35.0%
! CAGCCTAAGATATTAGCTTA+TGG - chr4_1:48578448-48578467 None:intergenic 35.0%
! AACTCCCAAACTTTCTTTTG+AGG + chr4_1:48556910-48556929 Msa0552110:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG - chr4_1:48556918-48556937 Msa0552120:CDS 35.0%
TGGAAAATCTCAGAAGCTAT+TGG - chr4_1:48557086-48557105 Msa0552120:CDS 35.0%
TACGATGCAGATAAAAGAAC+CGG - chr4_1:48557165-48557184 Msa0552120:intron 35.0%
ATTACACTCTTTAGTCCACA+TGG + chr4_1:48557189-48557208 Msa0552110:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG + chr4_1:48557201-48557220 Msa0552110:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG - chr4_1:48557207-48557226 Msa0552120:intron 35.0%
GATTCTGCTTTATAACTGAG+GGG - chr4_1:48557278-48557297 Msa0552120:intron 35.0%
CTGATTCTGCTTTATAACTG+AGG - chr4_1:48557280-48557299 Msa0552120:intron 35.0%
ACATAATTAGCTACATGGTG+TGG - chr4_1:48557449-48557468 None:intergenic 35.0%
TTACACTATTTGAGCTTTGC+AGG + chr4_1:48557523-48557542 Msa0552110:intron 35.0%
GAGATTATGACATAGATGCA+AGG - chr4_1:48557562-48557581 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG - chr4_1:48557603-48557622 None:intergenic 35.0%
TCAGAAGGTAGAAGTTGTAT+TGG + chr4_1:48557757-48557776 Msa0552110:five_prime_UTR 35.0%
! ACCTTTTCAAAAAGAAAGCG+CGG + chr4_1:48557817-48557836 Msa0552110:five_prime_UTR 35.0%
TCTCAGTGATCATACTCTTA+AGG + chr4_1:48558110-48558129 Msa0552110:intron 35.0%
TAAAGTAAGTAGTCTTCCCT+CGG - chr4_1:48558304-48558323 None:intergenic 35.0%
GAAGACTACTTACTTTACAC+TGG + chr4_1:48558307-48558326 Msa0552110:CDS 35.0%
!! TTACTTTACACTGGCTTTCT+TGG + chr4_1:48558316-48558335 Msa0552110:CDS 35.0%
TAGGAAGACTAAATGATAGC+AGG - chr4_1:48558426-48558445 None:intergenic 35.0%
TTTCATGTTACCAATCAGGA+TGG + chr4_1:48558489-48558508 Msa0552110:intron 35.0%
AAACAGAATGAACAGCATTG+AGG - chr4_1:48567641-48567660 None:intergenic 35.0%
!! AACTTTAAGAGCTCTGGATT+CGG + chr4_1:48568021-48568040 Msa0552110:intron 35.0%
!! AAGAGCATTTATCTCTTCCT+CGG - chr4_1:48568074-48568093 None:intergenic 35.0%
!! TGGCAGATTACTTACTTTTG+GGG - chr4_1:48568124-48568143 None:intergenic 35.0%
!! CTGGCAGATTACTTACTTTT+GGG - chr4_1:48568125-48568144 None:intergenic 35.0%
! TCTGGCAGATTACTTACTTT+TGG - chr4_1:48568126-48568145 None:intergenic 35.0%
GGAGGTAATAACAATTGATC+TGG - chr4_1:48568144-48568163 None:intergenic 35.0%
GTCAAAATCCATTTAAAGGG+AGG - chr4_1:48568162-48568181 None:intergenic 35.0%
! ATATTTTCTTACCCCATCCT+CGG + chr4_1:48568214-48568233 Msa0552110:intron 35.0%
! AATTTCATTTTCCGAGGATG+GGG - chr4_1:48568228-48568247 None:intergenic 35.0%
! GAATTTCATTTTCCGAGGAT+GGG - chr4_1:48568229-48568248 None:intergenic 35.0%
! TGAATTTCATTTTCCGAGGA+TGG - chr4_1:48568230-48568249 None:intergenic 35.0%
! TCTTTTCATTTAGTGTGGAG+TGG + chr4_1:48568689-48568708 Msa0552110:intron 35.0%
TGTTCAGGTGAAGTTTCAAT+AGG - chr4_1:48569360-48569379 None:intergenic 35.0%
GGAGAAATCATTCATTCCAT+AGG - chr4_1:48569397-48569416 None:intergenic 35.0%
GGCAAGGAAAAAACTAGATT+AGG - chr4_1:48569521-48569540 None:intergenic 35.0%
GTCAATATTGTTCATAGGCA+TGG - chr4_1:48569619-48569638 None:intergenic 35.0%
GGAACAAATTATAAGGCTTC+CGG - chr4_1:48570202-48570221 None:intergenic 35.0%
TGGCTAATTCTATCCAGAAA+CGG + chr4_1:48570237-48570256 Msa0552110:intron 35.0%
ATAGTGATGATAAAGCGGAA+CGG + chr4_1:48570504-48570523 Msa0552110:intron 35.0%
TAGCATGCTAGTATATGGAT+AGG - chr4_1:48570819-48570838 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr4_1:48571451-48571470 Msa0552110:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr4_1:48571452-48571471 Msa0552110:intron 35.0%
CATCTGTGAATATGTTCTTC+TGG - chr4_1:48572162-48572181 None:intergenic 35.0%
TTTAACACAGGGTATAACAC+AGG + chr4_1:48572312-48572331 Msa0552110:intron 35.0%
TTAACACAGGGTATAACACA+GGG + chr4_1:48572313-48572332 Msa0552110:intron 35.0%
GATGAAGATGCAAAAGGATT+AGG + chr4_1:48572427-48572446 Msa0552110:intron 35.0%
CATTTGAACCACAACTTTCA+TGG + chr4_1:48572483-48572502 Msa0552110:intron 35.0%
ATCATGTTCACTATCCACAA+TGG - chr4_1:48572639-48572658 None:intergenic 35.0%
AAGGAAAGTAATCGATGTCA+CGG - chr4_1:48572674-48572693 None:intergenic 35.0%
AGTCAGATGTTTATAGTTGC+GGG - chr4_1:48572723-48572742 None:intergenic 35.0%
TCGTCTAGCAATACATTATG+AGG + chr4_1:48558726-48558745 Msa0552110:intron 35.0%
GGAATTGAGTATCTTCATCA+AGG - chr4_1:48558786-48558805 Msa0552130:CDS 35.0%
TGAAGATACTCAATTCCCTT+CGG + chr4_1:48558789-48558808 Msa0552110:intron 35.0%
ATTTCTCTTGGTATACCGAA+GGG - chr4_1:48558807-48558826 Msa0552130:CDS 35.0%
AGGCTTCAAAACATTTCTCT+TGG - chr4_1:48558819-48558838 Msa0552130:CDS 35.0%
! AAATTCTGCAACGAACCTTT+TGG + chr4_1:48558882-48558901 Msa0552110:intron 35.0%
TCAAATTCATCATGTCAACG+TGG - chr4_1:48558967-48558986 Msa0552130:CDS 35.0%
CCAAGAGTTCATCAATGAAA+TGG - chr4_1:48559000-48559019 Msa0552130:CDS 35.0%
CCATTTCATTGATGAACTCT+TGG + chr4_1:48558997-48559016 Msa0552110:intron 35.0%
! GCTTTTGGATATGTCTTCAA+AGG - chr4_1:48559083-48559102 Msa0552130:CDS 35.0%
ATCAGTTTAAGGAAGAACTG+GGG - chr4_1:48559112-48559131 Msa0552130:CDS 35.0%
ATATAAGAGAAAATGGGCCT+AGG + chr4_1:48559270-48559289 Msa0552110:intron 35.0%
! ATGTGTCACTCATTGTGAAA+CGG + chr4_1:48559456-48559475 Msa0552110:intron 35.0%
TTTAACAACAACGTTGATGC+GGG - chr4_1:48559644-48559663 Msa0552130:CDS 35.0%
GTTTAACAACAACGTTGATG+CGG - chr4_1:48559645-48559664 Msa0552130:CDS 35.0%
! TGCCCGAATTATTGATGATA+TGG + chr4_1:48559718-48559737 Msa0552110:intron 35.0%
ACTGCTATAACTTCAAATCC+CGG + chr4_1:48559746-48559765 Msa0552110:intron 35.0%
CAATGAAAATCTTGGCACAA+AGG + chr4_1:48560054-48560073 Msa0552110:intron 35.0%
GGATAATGTCTATTACGTTG+AGG - chr4_1:48560080-48560099 Msa0552130:intron 35.0%
! TGATGACTTGTATGTTTGGT+CGG - chr4_1:48560219-48560238 Msa0552130:intron 35.0%
! GTACTGATGACTTGTATGTT+TGG - chr4_1:48560223-48560242 Msa0552130:intron 35.0%
TGTTTATCATTCACCTGTTG+GGG - chr4_1:48560656-48560675 Msa0552130:intron 35.0%
AGGTGAATGATAAACATTCC+AGG + chr4_1:48560660-48560679 Msa0552110:intron 35.0%
GGTGAATGATAAACATTCCA+GGG + chr4_1:48560661-48560680 Msa0552110:intron 35.0%
GTTGAATGATGAACATTCCA+GGG + chr4_1:48560700-48560719 Msa0552110:intron 35.0%
TTTGCATACTCACATCTGTT+GGG - chr4_1:48560734-48560753 Msa0552130:intron 35.0%
ATTTGCATACTCACATCTGT+TGG - chr4_1:48560735-48560754 Msa0552130:intron 35.0%
AACAGATGTGAGTATGCAAA+TGG + chr4_1:48560734-48560753 Msa0552110:intron 35.0%
TGATACAACAACGTCAACAA+CGG + chr4_1:48560857-48560876 Msa0552110:intron 35.0%
AAGTGTTAGGGATTTAGTTG+AGG - chr4_1:48560998-48561017 None:intergenic 35.0%
GTAGTGATGTGTGAAACTAT+TGG - chr4_1:48561302-48561321 None:intergenic 35.0%
!! CTTCTTTTGAAGAACCAGAT+CGG + chr4_1:48561735-48561754 Msa0552110:three_prime_UTR 35.0%
TTTGAAAACCCAGATCTATC+TGG + chr4_1:48561821-48561840 Msa0552110:intron 35.0%
ACAAAAGAGATTATCCGATC+TGG - chr4_1:48561894-48561913 None:intergenic 35.0%
! TATTCCGAATTTTGTAGCTC+TGG + chr4_1:48562011-48562030 Msa0552110:intron 35.0%
GTACATGTGAAAACTGAATG+AGG - chr4_1:48562138-48562157 None:intergenic 35.0%
GTACAGGTGAAAACTTAATG+AGG - chr4_1:48553672-48553691 None:intergenic 35.0%
! TATTCCGCATTTTGTAGTTC+TGG + chr4_1:48553706-48553725 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48553714-48553733 Msa0552110:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48553829-48553848 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:48553837-48553856 None:intergenic 35.0%
GGATCCAGAACTACAAAATT+AGG - chr4_1:48553878-48553897 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCC+AGG + chr4_1:48553878-48553897 Msa0552110:intron 35.0%
!!! ATTTTGTAGTTCTGGATCCA+GGG + chr4_1:48553879-48553898 Msa0552110:intron 35.0%
CAGAATCTGCTCTTCAATTA+CGG - chr4_1:48554417-48554436 None:intergenic 35.0%
CTTAAACCTTGAAAAGTTGG+GGG - chr4_1:48554474-48554493 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG + chr4_1:48554659-48554678 Msa0552110:intron 35.0%
TAACACCCAAAGGACATTTA+AGG + chr4_1:48554669-48554688 Msa0552110:intron 35.0%
AACACCCAAAGGACATTTAA+GGG + chr4_1:48554670-48554689 Msa0552110:intron 35.0%
ACAAGTAGCGTTTAAAGAAC+TGG + chr4_1:48554743-48554762 Msa0552110:intron 35.0%
GGAAAGCAGTAAAGAAAACA+AGG - chr4_1:48554992-48555011 None:intergenic 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG - chr4_1:48555013-48555032 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG - chr4_1:48555014-48555033 None:intergenic 35.0%
TCTGTTCAGAAGAGTAAACA+AGG - chr4_1:48555067-48555086 None:intergenic 35.0%
! CAGCCTAAGATATTAGCTTA+TGG + chr4_1:48578448-48578467 Msa0552110:three_prime_UTR 35.0%
TGGCCATAAGCTAATATCTT+AGG - chr4_1:48556402-48556421 Msa0552120:CDS 35.0%
! GATATTAGCTTATGGCCATT+TGG + chr4_1:48578456-48578475 Msa0552110:three_prime_UTR 35.0%
AGAAGCTTAATGATGAAGAG+AGG + chr4_1:48578809-48578828 Msa0552110:three_prime_UTR 35.0%
! AGAAAAGGTGCACAAATAAG+AGG + chr4_1:48578893-48578912 Msa0552110:three_prime_UTR 35.0%
CACAAATAAGAGGTTAAGGT+TGG + chr4_1:48578903-48578922 Msa0552110:intron 35.0%
! CTGATTGGTTGAAATTGGTA+TGG + chr4_1:48579049-48579068 Msa0552110:intron 35.0%
TTGAAATTGGTATGGCTAGT+TGG + chr4_1:48579057-48579076 Msa0552110:intron 35.0%
TTATGGGTTTCATGTGATAG+AGG + chr4_1:48579095-48579114 Msa0552110:intron 35.0%
! AACTCCCAAACTTTCTTTTG+AGG + chr4_1:48556910-48556929 Msa0552110:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG - chr4_1:48556918-48556937 Msa0552120:CDS 35.0%
TGGAAAATCTCAGAAGCTAT+TGG - chr4_1:48557086-48557105 Msa0552120:CDS 35.0%
AACGATGCAGATAAAAGAAC+CGG - chr4_1:48579963-48579982 None:intergenic 35.0%
ATTACACTCTTTAGTCCACA+TGG + chr4_1:48557189-48557208 Msa0552110:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG + chr4_1:48557201-48557220 Msa0552110:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG - chr4_1:48557207-48557226 Msa0552120:intron 35.0%
GATTCTGCTTTATAACTGAG+GGG - chr4_1:48557278-48557297 Msa0552120:intron 35.0%
CTGATTCTGCTTTATAACTG+AGG - chr4_1:48557280-48557299 Msa0552120:intron 35.0%
ACATAATTAGCTACATGGTG+TGG - chr4_1:48557449-48557468 None:intergenic 35.0%
TTACACTATTTGAGCTTTGC+AGG + chr4_1:48557523-48557542 Msa0552110:intron 35.0%
GAGATTATGACATAGATGCA+AGG - chr4_1:48557562-48557581 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG - chr4_1:48557603-48557622 None:intergenic 35.0%
TCAGAAGGTAGAAGTTGTAT+TGG + chr4_1:48557757-48557776 Msa0552110:five_prime_UTR 35.0%
TCTCAGTGATCATACTCTTA+AGG + chr4_1:48558110-48558129 Msa0552110:intron 35.0%
TAAAGTAAGTAGTCTTCCCT+CGG - chr4_1:48558304-48558323 None:intergenic 35.0%
GAAGACTACTTACTTTACAC+TGG + chr4_1:48558307-48558326 Msa0552110:CDS 35.0%
!! TTACTTTACACTGGCTTTCT+TGG + chr4_1:48558316-48558335 Msa0552110:CDS 35.0%
TAGGAAGACTAAATGATAGC+AGG - chr4_1:48558426-48558445 None:intergenic 35.0%
TCGTGTTTGAAGACACTTTA+AGG + chr4_1:48581364-48581383 Msa0552110:three_prime_UTR 35.0%
CGTGTTTGAAGACACTTTAA+GGG + chr4_1:48581365-48581384 Msa0552110:three_prime_UTR 35.0%
AAACAGAATGAACAGCATTG+AGG - chr4_1:48567641-48567660 None:intergenic 35.0%
!! AACTTTAAGAGCTCTGGATT+CGG + chr4_1:48568021-48568040 Msa0552110:intron 35.0%
!! AAGAGCATTTATCTCTTCCT+CGG - chr4_1:48568074-48568093 None:intergenic 35.0%
!! TGGCAGATTACTTACTTTTG+GGG - chr4_1:48568124-48568143 None:intergenic 35.0%
!! CTGGCAGATTACTTACTTTT+GGG - chr4_1:48568125-48568144 None:intergenic 35.0%
! TCTGGCAGATTACTTACTTT+TGG - chr4_1:48568126-48568145 None:intergenic 35.0%
GGAGGTAATAACAATTGATC+TGG - chr4_1:48568144-48568163 None:intergenic 35.0%
GTCAAAATCCATTTAAAGGG+AGG - chr4_1:48568162-48568181 None:intergenic 35.0%
! ATATTTTCTTACCCCATCCT+CGG + chr4_1:48568214-48568233 Msa0552110:intron 35.0%
! ATAGTGAGTTTCATTTTCCG+AGG - chr4_1:48582096-48582115 None:intergenic 35.0%
! TCTTTTCATTTAGTGTGGAG+TGG + chr4_1:48568689-48568708 Msa0552110:intron 35.0%
TGTTCAGGTGAAGTTTCAAT+AGG - chr4_1:48569360-48569379 None:intergenic 35.0%
GGAGAAATCATTCATTCCAT+AGG - chr4_1:48569397-48569416 None:intergenic 35.0%
GGCAAGGAAAAAACTAGATT+AGG - chr4_1:48569521-48569540 None:intergenic 35.0%
GTCAATATTGTTCATAGGCA+TGG - chr4_1:48569619-48569638 None:intergenic 35.0%
GGAACAAATTATAAGGCTTC+CGG - chr4_1:48570202-48570221 None:intergenic 35.0%
TGGCTAATTCTATCCAGAAA+CGG + chr4_1:48570237-48570256 Msa0552110:intron 35.0%
TGATCATCACTATCATCACT+GGG - chr4_1:48584355-48584374 None:intergenic 35.0%
TTGATCATCACTATCATCAC+TGG - chr4_1:48584356-48584375 None:intergenic 35.0%
! TGATGATAGTGATGATCAAG+CGG + chr4_1:48584357-48584376 Msa0552110:three_prime_UTR 35.0%
GTACAGGTGAAAACTCAATG+AGG - chr4_1:48553515-48553534 None:intergenic 40.0%
CGATCCAGAACTACAAAATG+CGG - chr4_1:48553713-48553732 None:intergenic 40.0%
!!! CATTTTGTAGTTCTGGATCG+AGG + chr4_1:48553713-48553732 Msa0552110:intron 40.0%
CGATCCAGACCTACAATATT+AGG - chr4_1:48554044-48554063 None:intergenic 40.0%
AATATTGTAGGTCTGGATCG+AGG + chr4_1:48554044-48554063 Msa0552110:intron 40.0%
ATATTGTAGGTCTGGATCGA+GGG + chr4_1:48554045-48554064 Msa0552110:intron 40.0%
! GCAGAGATGTTGTTTGTATC+AGG + chr4_1:48554243-48554262 Msa0552110:five_prime_UTR 40.0%
AGCAGTAACGATGTTCATTC+TGG + chr4_1:48554525-48554544 Msa0552110:intron 40.0%
CAAAATTGCAGATGGAAAGG+CGG - chr4_1:48554614-48554633 None:intergenic 40.0%
GTGCAAAATTGCAGATGGAA+AGG - chr4_1:48554617-48554636 None:intergenic 40.0%
AGAACTTAATTTCGGAGGCA+CGG + chr4_1:48554801-48554820 Msa0552110:intron 40.0%
TTGTTGTGCATAATCGCAGA+TGG - chr4_1:48555110-48555129 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:48555382-48555401 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr4_1:48555140-48555159 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr4_1:48555244-48555263 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:48555382-48555401 Msa0552110:intron 40.0%
TGTCTATGCTACAGAGCTAT+AGG + chr4_1:48555597-48555616 Msa0552110:intron 40.0%
GGTGCACAAATAAGAGGTTA+AGG - chr4_1:48578899-48578918 None:intergenic 40.0%
!! GGTGGACTGACTTAAAGAAA+AGG - chr4_1:48578878-48578897 None:intergenic 40.0%
AGCATGGTTGGAAAAAATGG+TGG - chr4_1:48578860-48578879 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG - chr4_1:48578848-48578867 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG + chr4_1:48556007-48556026 Msa0552110:intron 40.0%
! CCATGCTTTTGTGAATGCTT+GGG + chr4_1:48556008-48556027 Msa0552110:intron 40.0%
TTCCAGATCACGTGTAGATT+AGG + chr4_1:48556080-48556099 Msa0552110:intron 40.0%
TCCAGATCACGTGTAGATTA+GGG + chr4_1:48556081-48556100 Msa0552110:intron 40.0%
!! TTAGGGTATTGCATATTCCC+CGG + chr4_1:48556098-48556117 Msa0552110:intron 40.0%
AAGGGACAAATCAGAACAGT+GGG - chr4_1:48578639-48578658 None:intergenic 40.0%
AAAGGGACAAATCAGAACAG+TGG - chr4_1:48578638-48578657 None:intergenic 40.0%
TCCTCTTCCACTTCTTAGTT+AGG + chr4_1:48556261-48556280 Msa0552110:intron 40.0%
CCTCTTCCACTTCTTAGTTA+GGG + chr4_1:48556262-48556281 Msa0552110:intron 40.0%
TGCCTCTTCGAATTCTTGAA+CGG + chr4_1:48556479-48556498 Msa0552110:five_prime_UTR 40.0%
!! CAAGGGTACCTTGAGAAAAA+TGG + chr4_1:48556614-48556633 Msa0552110:five_prime_UTR 40.0%
TAAACAGGAAGATACCAGGA+GGG - chr4_1:48556789-48556808 Msa0552120:intron 40.0%
ATAAACAGGAAGATACCAGG+AGG - chr4_1:48556790-48556809 Msa0552120:intron 40.0%
TCATTATCTGCTGCTAGTTC+CGG + chr4_1:48557143-48557162 Msa0552110:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG - chr4_1:48557238-48557257 Msa0552120:intron 40.0%
TACCATCAGTTCAAAAGTCC+CGG + chr4_1:48557249-48557268 Msa0552110:intron 40.0%
TTTATAACTGAGGGGATACC+GGG - chr4_1:48557270-48557289 Msa0552120:intron 40.0%
CTTTATAACTGAGGGGATAC+CGG - chr4_1:48557271-48557290 Msa0552120:intron 40.0%
CTATTTGAGCTTTGCAGGTT+CGG + chr4_1:48557528-48557547 Msa0552110:intron 40.0%
TATTTGAGCTTTGCAGGTTC+GGG + chr4_1:48557529-48557548 Msa0552110:intron 40.0%
CTTCCAGTCACAATTAGGTA+TGG - chr4_1:48557598-48557617 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG + chr4_1:48557742-48557761 Msa0552110:five_prime_UTR 40.0%
GGTAGAAGTTGTATTGGAGT+CGG + chr4_1:48557763-48557782 Msa0552110:five_prime_UTR 40.0%
AGTTGTATTGGAGTCGGTAT+AGG + chr4_1:48557769-48557788 Msa0552110:five_prime_UTR 40.0%
GATCATACTCTTAAGGTGTG+TGG + chr4_1:48558117-48558136 Msa0552110:five_prime_UTR 40.0%
TAAGGTGTGTGGAGTATAGA+TGG + chr4_1:48558128-48558147 Msa0552110:exon 40.0%
! CTGCTATCATTTTGTTCCGA+GGG + chr4_1:48558285-48558304 Msa0552110:CDS 40.0%
TGTTTGGAGACTTCCAGATA+TGG + chr4_1:48558521-48558540 Msa0552110:CDS 40.0%
GTTTGGAGACTTCCAGATAT+GGG + chr4_1:48558522-48558541 Msa0552110:CDS 40.0%
CATCAGATATAGCCCATATC+TGG - chr4_1:48558537-48558556 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG + chr4_1:48558535-48558554 Msa0552110:CDS 40.0%
TCGTGTTTGAAGACACTTGA+AGG + chr4_1:48558566-48558585 Msa0552110:three_prime_UTR 40.0%
CGTGTTTGAAGACACTTGAA+GGG + chr4_1:48558567-48558586 Msa0552110:three_prime_UTR 40.0%
! AATTTCACACCCAAGCATTG+AGG - chr4_1:48558705-48558724 Msa0552130:CDS 40.0%
CATTTCTCTTGGTATACCGA+AGG - chr4_1:48558808-48558827 Msa0552130:CDS 40.0%
!!! ATGTCTTTTTAGGTTGGGAG+AGG - chr4_1:48558839-48558858 Msa0552130:CDS 40.0%
CATATCGTCTGCAGACAATA+AGG - chr4_1:48558862-48558881 Msa0552130:CDS 40.0%
!!! TTGGTTGGTTTTTGTGCAGA+CGG - chr4_1:48558939-48558958 Msa0552130:CDS 40.0%
TTTAAGGAAGAACTGGGGAA+GGG - chr4_1:48559107-48559126 Msa0552130:CDS 40.0%
!! TCTGCATAAGAGTATCTGGA+AGG + chr4_1:48559149-48559168 Msa0552110:intron 40.0%
! GTTTGGCATAATGGAAGTGA+AGG - chr4_1:48559368-48559387 Msa0552130:intron 40.0%
! TTTCAAAGCCTCGTCTTGTT+TGG - chr4_1:48559385-48559404 Msa0552130:intron 40.0%
GAATTTGAATGCACAGGCAT+CGG - chr4_1:48559539-48559558 Msa0552130:CDS 40.0%
TAGGCAACAATACAAGGTCT+TGG + chr4_1:48559672-48559691 Msa0552110:intron 40.0%
ATATTACGCTGTTGGGAGAA+CGG - chr4_1:48559873-48559892 Msa0552130:intron 40.0%
CTCTGATACATACTAGGATG+GGG - chr4_1:48560181-48560200 Msa0552130:intron 40.0%
GCTCTGATACATACTAGGAT+GGG - chr4_1:48560182-48560201 Msa0552130:intron 40.0%
GTTGTTGTCGTAGCATTGTT+GGG - chr4_1:48560525-48560544 Msa0552130:CDS 40.0%
TGTTGTTGTCGTAGCATTGT+TGG - chr4_1:48560526-48560545 Msa0552130:CDS 40.0%
CAACAACTAATGCATCATGC+AGG + chr4_1:48560541-48560560 Msa0552110:intron 40.0%
GTTGAATGCTAAGCATTCCA+GGG + chr4_1:48560582-48560601 Msa0552110:intron 40.0%
TAAGCCCCTTACAATTTGGA+TGG + chr4_1:48560607-48560626 Msa0552110:intron 40.0%
GTTTATCATTCACCTGTTGG+GGG - chr4_1:48560655-48560674 Msa0552130:intron 40.0%
TGTTCATCATTCAACCCGTT+GGG - chr4_1:48560695-48560714 Msa0552130:intron 40.0%
ATGTTCATCATTCAACCCGT+TGG - chr4_1:48560696-48560715 Msa0552130:intron 40.0%
GGTTGAATGATGAACATTCC+AGG + chr4_1:48560699-48560718 Msa0552110:intron 40.0%
TTGCATACTCACATCTGTTG+GGG - chr4_1:48560733-48560752 Msa0552130:intron 40.0%
TGCTACTCACTTGTGCATAT+TGG + chr4_1:48561395-48561414 Msa0552110:intron 40.0%
CGCAACACAACATAACTAAG+TGG + chr4_1:48561632-48561651 Msa0552110:intron 40.0%
GTTGTTTGTCTTTCAAACCC+AGG + chr4_1:48561666-48561685 Msa0552110:intron 40.0%
TGCGAAATTGCAGACAGATT+GGG - chr4_1:48561705-48561724 None:intergenic 40.0%
!! CGATCTGGTTCTTCAAAAGA+AGG - chr4_1:48561737-48561756 None:intergenic 40.0%
!! GGTTGTTCTAAAGGAGATTG+AGG - chr4_1:48561873-48561892 None:intergenic 40.0%
!! CTCCTTTAGAACAACCAGAT+CGG + chr4_1:48561877-48561896 Msa0552110:intron 40.0%
ATCCGATCTGGTTGTTCTAA+AGG - chr4_1:48561882-48561901 None:intergenic 40.0%
CGATCCAGAGCTACAAAATT+CGG - chr4_1:48562018-48562037 None:intergenic 40.0%
!!! AATTTTGTAGCTCTGGATCG+AGG + chr4_1:48562018-48562037 Msa0552110:intron 40.0%
!!! ATTTTGTAGCTCTGGATCGA+GGG + chr4_1:48562019-48562038 Msa0552110:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48562302-48562321 None:intergenic 40.0%
GTACAGGTGAAAACTGAATG+AGG - chr4_1:48554003-48554022 None:intergenic 40.0%
CGATCCAGAACTACAAAATG+CGG - chr4_1:48553713-48553732 None:intergenic 40.0%
!!! CATTTTGTAGTTCTGGATCG+AGG + chr4_1:48553713-48553732 Msa0552110:intron 40.0%
CGATCCAGACCTACAATATT+AGG - chr4_1:48554044-48554063 None:intergenic 40.0%
AATATTGTAGGTCTGGATCG+AGG + chr4_1:48554044-48554063 Msa0552110:intron 40.0%
ATATTGTAGGTCTGGATCGA+GGG + chr4_1:48554045-48554064 Msa0552110:intron 40.0%
! GCAGAGATGTTGTTTGTATC+AGG + chr4_1:48554243-48554262 Msa0552110:five_prime_UTR 40.0%
AGCAGTAACGATGTTCATTC+TGG + chr4_1:48554525-48554544 Msa0552110:intron 40.0%
GTGCAAAATTGCAGATGGAA+AGG - chr4_1:48554617-48554636 None:intergenic 40.0%
AGAACTTAATTTCGGAGGCA+CGG + chr4_1:48554801-48554820 Msa0552110:intron 40.0%
TTGTTGTGCATAATCGCAGA+TGG - chr4_1:48555110-48555129 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:48555382-48555401 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr4_1:48555140-48555159 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr4_1:48555244-48555263 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:48555382-48555401 Msa0552110:intron 40.0%
TGTCTATGCTACAGAGCTAT+AGG + chr4_1:48555597-48555616 Msa0552110:intron 40.0%
GGTGCACAAATAAGAGGTTA+AGG - chr4_1:48578899-48578918 None:intergenic 40.0%
!! GGTGGACTGACTTAAAGAAA+AGG - chr4_1:48578878-48578897 None:intergenic 40.0%
AGCATGGTTGGAAAAAATGG+TGG - chr4_1:48578860-48578879 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG - chr4_1:48578848-48578867 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG + chr4_1:48556007-48556026 Msa0552110:intron 40.0%
! CCATGCTTTTGTGAATGCTT+GGG + chr4_1:48556008-48556027 Msa0552110:intron 40.0%
TTCCAGATCACGTGTAGATT+AGG + chr4_1:48556080-48556099 Msa0552110:intron 40.0%
TCCAGATCACGTGTAGATTA+GGG + chr4_1:48556081-48556100 Msa0552110:intron 40.0%
!! TTAGGGTATTGCATATTCCC+CGG + chr4_1:48556098-48556117 Msa0552110:intron 40.0%
AAGGGACAAATCAGAACAGT+GGG - chr4_1:48578639-48578658 None:intergenic 40.0%
AAAGGGACAAATCAGAACAG+TGG - chr4_1:48578638-48578657 None:intergenic 40.0%
TCCTCTTCCACTTCTTAGTT+AGG + chr4_1:48556261-48556280 Msa0552110:intron 40.0%
CCTCTTCCACTTCTTAGTTA+GGG + chr4_1:48556262-48556281 Msa0552110:intron 40.0%
TGCCTCTTCGAATTCTTGAA+CGG + chr4_1:48556479-48556498 Msa0552110:five_prime_UTR 40.0%
!! CAAGGGTACCTTGAGAAAAA+TGG + chr4_1:48556614-48556633 Msa0552110:five_prime_UTR 40.0%
TAAACAGGAAGATACCAGGA+GGG - chr4_1:48556789-48556808 Msa0552120:intron 40.0%
ATAAACAGGAAGATACCAGG+AGG - chr4_1:48556790-48556809 Msa0552120:intron 40.0%
TCATTATCTGCTGCTAGTTC+CGG + chr4_1:48557143-48557162 Msa0552110:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG - chr4_1:48557238-48557257 Msa0552120:intron 40.0%
TACCATCAGTTCAAAAGTCC+CGG + chr4_1:48557249-48557268 Msa0552110:intron 40.0%
TTTATAACTGAGGGGATACC+GGG - chr4_1:48557270-48557289 Msa0552120:intron 40.0%
CTTTATAACTGAGGGGATAC+CGG - chr4_1:48557271-48557290 Msa0552120:intron 40.0%
CTATTTGAGCTTTGCAGGTT+CGG + chr4_1:48557528-48557547 Msa0552110:intron 40.0%
TATTTGAGCTTTGCAGGTTC+GGG + chr4_1:48557529-48557548 Msa0552110:intron 40.0%
CTTCCAGTCACAATTAGGTA+TGG - chr4_1:48557598-48557617 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG + chr4_1:48557742-48557761 Msa0552110:five_prime_UTR 40.0%
GGTAGAAGTTGTATTGGAGT+CGG + chr4_1:48557763-48557782 Msa0552110:five_prime_UTR 40.0%
AGTTGTATTGGAGTCGGTAT+AGG + chr4_1:48557769-48557788 Msa0552110:five_prime_UTR 40.0%
GATCATACTCTTAAGGTGTG+TGG + chr4_1:48558117-48558136 Msa0552110:five_prime_UTR 40.0%
TAAGGTGTGTGGAGTATAGA+TGG + chr4_1:48558128-48558147 Msa0552110:exon 40.0%
! CTGCTATCATTTTGTTCCGA+GGG + chr4_1:48558285-48558304 Msa0552110:CDS 40.0%
TGTTTGGAGACTTCCAGATA+TGG + chr4_1:48558521-48558540 Msa0552110:CDS 40.0%
GTTTGGAGACTTCCAGATAT+GGG + chr4_1:48558522-48558541 Msa0552110:CDS 40.0%
CATCAGATATAGCCCATATC+TGG - chr4_1:48558537-48558556 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG + chr4_1:48558535-48558554 Msa0552110:CDS 40.0%
TCGTGTTTGAAGACACTTGA+AGG + chr4_1:48558566-48558585 Msa0552110:three_prime_UTR 40.0%
CGTGTTTGAAGACACTTGAA+GGG + chr4_1:48558567-48558586 Msa0552110:three_prime_UTR 40.0%
!!! AGTGCTTGGTGTTTTCTTGA+TGG + chr4_1:48567673-48567692 Msa0552110:intron 40.0%
! TCTTGATGGCTACAATGCTA+AGG + chr4_1:48567687-48567706 Msa0552110:three_prime_UTR 40.0%
! CTTGCAAGTGTTATTGATGG+AGG - chr4_1:48567809-48567828 None:intergenic 40.0%
TCTTCCTGTCCACAAATACA+AGG + chr4_1:48568090-48568109 Msa0552110:intron 40.0%
GAAACCTTGTATTTGTGGAC+AGG - chr4_1:48568097-48568116 None:intergenic 40.0%
GTCCACAAATACAAGGTTTC+TGG + chr4_1:48568097-48568116 Msa0552110:intron 40.0%
GACCAGAAACCTTGTATTTG+TGG - chr4_1:48568102-48568121 None:intergenic 40.0%
GACACGGGATAATTCAAATG+CGG + chr4_1:48568751-48568770 Msa0552110:intron 40.0%
TGCTTGGAGCAAGTTAATGT+TGG + chr4_1:48568818-48568837 Msa0552110:intron 40.0%
AACATAGGGTTTACAAAGGG+TGG + chr4_1:48569087-48569106 Msa0552110:intron 40.0%
! AACTCAAGCTCATGATGGAA+TGG - chr4_1:48569335-48569354 None:intergenic 40.0%
AGGTAAACTCAAGCTCATGA+TGG - chr4_1:48569340-48569359 None:intergenic 40.0%
GGAAAAAACTAGATTAGGGG+AGG - chr4_1:48569516-48569535 None:intergenic 40.0%
!!! CTACACAACTTTTTTGGGCA+AGG - chr4_1:48569537-48569556 None:intergenic 40.0%
! TCGACAAAGTATCAACCATG+AGG - chr4_1:48569682-48569701 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG - chr4_1:48570033-48570052 None:intergenic 40.0%
AACTGCCGAAATTGCATTGA+AGG - chr4_1:48570127-48570146 None:intergenic 40.0%
GTTCCTGAACATTGTAAACG+TGG + chr4_1:48570217-48570236 Msa0552110:intron 40.0%
TAGCCACGTTTACAATGTTC+AGG - chr4_1:48570223-48570242 None:intergenic 40.0%
GGCTAATTCTATCCAGAAAC+GGG + chr4_1:48570238-48570257 Msa0552110:intron 40.0%
TTAAAGACTCCCGTGAATGT+CGG - chr4_1:48570354-48570373 None:intergenic 40.0%
ACGGGAGTCTTTAAGTCATA+AGG + chr4_1:48570360-48570379 Msa0552110:intron 40.0%
GAAATAACCTGCTCAGATCT+GGG + chr4_1:48570646-48570665 Msa0552110:intron 40.0%
AGCTATCTTTCTCTCTCTAG+CGG - chr4_1:48570731-48570750 None:intergenic 40.0%
TGGGTGACATTTGGGAATTA+GGG - chr4_1:48570782-48570801 None:intergenic 40.0%
ATAGGCTTATTAGGACACGT+GGG - chr4_1:48570801-48570820 None:intergenic 40.0%
GTCAGTAGCATGCTAGTATA+TGG - chr4_1:48570824-48570843 None:intergenic 40.0%
ATCACGTGACCCACATAATA+GGG + chr4_1:48570846-48570865 Msa0552110:intron 40.0%
CTCGTACAGTCTCACAATAT+TGG + chr4_1:48571549-48571568 Msa0552110:intron 40.0%
TTTACTAAAAAGTCCCCCAG+CGG + chr4_1:48572081-48572100 Msa0552110:intron 40.0%
! TTTGAAGTTAACTACCGCTG+GGG - chr4_1:48572098-48572117 None:intergenic 40.0%
! GTTTGAAGTTAACTACCGCT+GGG - chr4_1:48572099-48572118 None:intergenic 40.0%
! TGTTTGAAGTTAACTACCGC+TGG - chr4_1:48572100-48572119 None:intergenic 40.0%
GTTGCAGATGAAGATGCAAA+AGG + chr4_1:48572421-48572440 Msa0552110:intron 40.0%
GAAGATGCAAAAGGATTAGG+TGG + chr4_1:48572430-48572449 Msa0552110:intron 40.0%
GTTCAAATGCTGGAAGGAAA+TGG - chr4_1:48572472-48572491 None:intergenic 40.0%
GAAAGTTGTGGTTCAAATGC+TGG - chr4_1:48572482-48572501 None:intergenic 40.0%
TGAACCACAACTTTCATGGT+TGG + chr4_1:48572487-48572506 Msa0552110:intron 40.0%
GCAAAGAAGCTATCAATCGT+GGG - chr4_1:48572547-48572566 None:intergenic 40.0%
TGCAAAGAAGCTATCAATCG+TGG - chr4_1:48572548-48572567 None:intergenic 40.0%
AGCTTGAAATGGTTAGAGGA+AGG - chr4_1:48572693-48572712 None:intergenic 40.0%
CATTTCTCTTGGTATACCGA+AGG - chr4_1:48558808-48558827 Msa0552130:CDS 40.0%
!!! ATGTCTTTTTAGGTTGGGAG+AGG - chr4_1:48558839-48558858 Msa0552130:CDS 40.0%
CATATCGTCTGCAGACAATA+AGG - chr4_1:48558862-48558881 Msa0552130:CDS 40.0%
!!! TTGGTTGGTTTTTGTGCAGA+CGG - chr4_1:48558939-48558958 Msa0552130:CDS 40.0%
TTTAAGGAAGAACTGGGGAA+GGG - chr4_1:48559107-48559126 Msa0552130:CDS 40.0%
!! TCTGCATAAGAGTATCTGGA+AGG + chr4_1:48559149-48559168 Msa0552110:intron 40.0%
! GTTTGGCATAATGGAAGTGA+AGG - chr4_1:48559368-48559387 Msa0552130:intron 40.0%
! TTTCAAAGCCTCGTCTTGTT+TGG - chr4_1:48559385-48559404 Msa0552130:intron 40.0%
GAATTTGAATGCACAGGCAT+CGG - chr4_1:48559539-48559558 Msa0552130:CDS 40.0%
TAGGCAACAATACAAGGTCT+TGG + chr4_1:48559672-48559691 Msa0552110:intron 40.0%
ATATTACGCTGTTGGGAGAA+CGG - chr4_1:48559873-48559892 Msa0552130:intron 40.0%
CTCTGATACATACTAGGATG+GGG - chr4_1:48560181-48560200 Msa0552130:intron 40.0%
GCTCTGATACATACTAGGAT+GGG - chr4_1:48560182-48560201 Msa0552130:intron 40.0%
GTTGTTGTCGTAGCATTGTT+GGG - chr4_1:48560525-48560544 Msa0552130:CDS 40.0%
TGTTGTTGTCGTAGCATTGT+TGG - chr4_1:48560526-48560545 Msa0552130:CDS 40.0%
CAACAACTAATGCATCATGC+AGG + chr4_1:48560541-48560560 Msa0552110:intron 40.0%
GTTGAATGCTAAGCATTCCA+GGG + chr4_1:48560582-48560601 Msa0552110:intron 40.0%
TAAGCCCCTTACAATTTGGA+TGG + chr4_1:48560607-48560626 Msa0552110:intron 40.0%
GTTTATCATTCACCTGTTGG+GGG - chr4_1:48560655-48560674 Msa0552130:intron 40.0%
TGTTCATCATTCAACCCGTT+GGG - chr4_1:48560695-48560714 Msa0552130:intron 40.0%
ATGTTCATCATTCAACCCGT+TGG - chr4_1:48560696-48560715 Msa0552130:intron 40.0%
GGTTGAATGATGAACATTCC+AGG + chr4_1:48560699-48560718 Msa0552110:intron 40.0%
TTGCATACTCACATCTGTTG+GGG - chr4_1:48560733-48560752 Msa0552130:intron 40.0%
TGCTACTCACTTGTGCATAT+TGG + chr4_1:48561395-48561414 Msa0552110:intron 40.0%
CGCAACACAACATAACTAAG+TGG + chr4_1:48561632-48561651 Msa0552110:intron 40.0%
GTTGTTTGTCTTTCAAACCC+AGG + chr4_1:48561666-48561685 Msa0552110:intron 40.0%
TGCGAAATTGCAGACAGATT+GGG - chr4_1:48561705-48561724 None:intergenic 40.0%
!! CGATCTGGTTCTTCAAAAGA+AGG - chr4_1:48561737-48561756 None:intergenic 40.0%
!! GGTTGTTCTAAAGGAGATTG+AGG - chr4_1:48561873-48561892 None:intergenic 40.0%
!! CTCCTTTAGAACAACCAGAT+CGG + chr4_1:48561877-48561896 Msa0552110:intron 40.0%
ATCCGATCTGGTTGTTCTAA+AGG - chr4_1:48561882-48561901 None:intergenic 40.0%
CGATCCAGAGCTACAAAATT+CGG - chr4_1:48562018-48562037 None:intergenic 40.0%
!!! AATTTTGTAGCTCTGGATCG+AGG + chr4_1:48562018-48562037 Msa0552110:intron 40.0%
!!! ATTTTGTAGCTCTGGATCGA+GGG + chr4_1:48562019-48562038 Msa0552110:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48562302-48562321 None:intergenic 40.0%
GTACAGGTGAAAACTGAATG+AGG - chr4_1:48554003-48554022 None:intergenic 40.0%
CGATCCAGAACTACAAAATG+CGG - chr4_1:48553713-48553732 None:intergenic 40.0%
!!! CATTTTGTAGTTCTGGATCG+AGG + chr4_1:48553713-48553732 Msa0552110:intron 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:48577142-48577161 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:48577142-48577161 Msa0552110:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:48577143-48577162 Msa0552110:intron 40.0%
! GCAGAGATGTTGTTTGTATC+AGG + chr4_1:48554243-48554262 Msa0552110:five_prime_UTR 40.0%
AGCAGTAACGATGTTCATTC+TGG + chr4_1:48554525-48554544 Msa0552110:intron 40.0%
CAAAATTGCAGATGGAAAGG+CGG - chr4_1:48554614-48554633 None:intergenic 40.0%
GTGCAAAATTGCAGATGGAA+AGG - chr4_1:48554617-48554636 None:intergenic 40.0%
AGAACTTAATTTCGGAGGCA+CGG + chr4_1:48554801-48554820 Msa0552110:intron 40.0%
TTGTTGTGCATAATCGCAGA+TGG - chr4_1:48555110-48555129 None:intergenic 40.0%
CCTCTTCCACTTCTTAGTTA+GGG - chr4_1:48556262-48556281 None:intergenic 40.0%
TCCTCTTCCACTTCTTAGTT+AGG - chr4_1:48556261-48556280 None:intergenic 40.0%
AAAGGGACAAATCAGAACAG+TGG + chr4_1:48578638-48578657 Msa0552110:three_prime_UTR 40.0%
AAGGGACAAATCAGAACAGT+GGG + chr4_1:48578639-48578658 Msa0552110:three_prime_UTR 40.0%
!! TTAGGGTATTGCATATTCCC+CGG - chr4_1:48556098-48556117 None:intergenic 40.0%
TCCAGATCACGTGTAGATTA+GGG - chr4_1:48556081-48556100 None:intergenic 40.0%
TTCCAGATCACGTGTAGATT+AGG - chr4_1:48556080-48556099 None:intergenic 40.0%
! CCATGCTTTTGTGAATGCTT+GGG - chr4_1:48556008-48556027 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG - chr4_1:48556007-48556026 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG + chr4_1:48578848-48578867 Msa0552110:three_prime_UTR 40.0%
AGCATGGTTGGAAAAAATGG+TGG + chr4_1:48578860-48578879 Msa0552110:three_prime_UTR 40.0%
!! GGTGGACTGACTTAAAGAAA+AGG + chr4_1:48578878-48578897 Msa0552110:three_prime_UTR 40.0%
GGTGCACAAATAAGAGGTTA+AGG + chr4_1:48578899-48578918 Msa0552110:three_prime_UTR 40.0%
TGCCTCTTCGAATTCTTGAA+CGG + chr4_1:48556479-48556498 Msa0552110:five_prime_UTR 40.0%
! ACCTGAAGCTTTGTGGTATT+GGG + chr4_1:48579299-48579318 Msa0552110:intron 40.0%
GTGAATTCAAACTCGCAAGT+GGG - chr4_1:48579356-48579375 Msa0552150:CDS 40.0%
TGTGAATTCAAACTCGCAAG+TGG - chr4_1:48579357-48579376 Msa0552150:CDS 40.0%
ACTTGCGAGTTTGAATTCAC+AGG + chr4_1:48579356-48579375 Msa0552110:intron 40.0%
CTTGCGAGTTTGAATTCACA+GGG + chr4_1:48579357-48579376 Msa0552110:intron 40.0%
!! CAAGGGTACCTTGAGAAAAA+TGG + chr4_1:48556614-48556633 Msa0552110:five_prime_UTR 40.0%
TAAACAGGAAGATACCAGGA+GGG - chr4_1:48556789-48556808 Msa0552120:intron 40.0%
ATAAACAGGAAGATACCAGG+AGG - chr4_1:48556790-48556809 Msa0552120:intron 40.0%
TCATTATCTGCTGCTAGTTC+CGG + chr4_1:48557143-48557162 Msa0552110:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG - chr4_1:48557238-48557257 Msa0552120:intron 40.0%
TACCATCAGTTCAAAAGTCC+CGG + chr4_1:48557249-48557268 Msa0552110:intron 40.0%
TTTATAACTGAGGGGATACC+GGG - chr4_1:48557270-48557289 Msa0552120:intron 40.0%
CTTTATAACTGAGGGGATAC+CGG - chr4_1:48557271-48557290 Msa0552120:intron 40.0%
CTATTTGAGCTTTGCAGGTT+CGG + chr4_1:48557528-48557547 Msa0552110:intron 40.0%
TATTTGAGCTTTGCAGGTTC+GGG + chr4_1:48557529-48557548 Msa0552110:intron 40.0%
CTTCCAGTCACAATTAGGTA+TGG - chr4_1:48557598-48557617 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG + chr4_1:48557742-48557761 Msa0552110:five_prime_UTR 40.0%
GGTAGAAGTTGTATTGGAGT+CGG + chr4_1:48557763-48557782 Msa0552110:five_prime_UTR 40.0%
AGTTGTATTGGAGTCGGTAT+AGG + chr4_1:48557769-48557788 Msa0552110:five_prime_UTR 40.0%
!! GTCGCGCTTTCTTTTTGAAA+AGG - chr4_1:48580619-48580638 None:intergenic 40.0%
GATCATACTCTTAAGGTGTG+TGG + chr4_1:48558117-48558136 Msa0552110:five_prime_UTR 40.0%
TAAGGTGTGTGGAGTATAGA+TGG + chr4_1:48558128-48558147 Msa0552110:exon 40.0%
! CTGCTATCATTTTGTTCCGA+GGG + chr4_1:48558285-48558304 Msa0552110:CDS 40.0%
TGTTTGGAGACTTCCAGATA+TGG + chr4_1:48558521-48558540 Msa0552110:CDS 40.0%
GTTTGGAGACTTCCAGATAT+GGG + chr4_1:48558522-48558541 Msa0552110:CDS 40.0%
CATCAGATATAGCCCATATC+TGG - chr4_1:48558537-48558556 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG + chr4_1:48558535-48558554 Msa0552110:CDS 40.0%
!!! AGTGCTTGGTGTTTTCTTGA+TGG + chr4_1:48567673-48567692 Msa0552110:intron 40.0%
! TCTTGATGGCTACAATGCTA+AGG + chr4_1:48567687-48567706 Msa0552110:three_prime_UTR 40.0%
! CTTGCAAGTGTTATTGATGG+AGG - chr4_1:48567809-48567828 None:intergenic 40.0%
TCTTCCTGTCCACAAATACA+AGG + chr4_1:48568090-48568109 Msa0552110:intron 40.0%
GAAACCTTGTATTTGTGGAC+AGG - chr4_1:48568097-48568116 None:intergenic 40.0%
GTCCACAAATACAAGGTTTC+TGG + chr4_1:48568097-48568116 Msa0552110:intron 40.0%
GACCAGAAACCTTGTATTTG+TGG - chr4_1:48568102-48568121 None:intergenic 40.0%
! AGTTTCATTTTCCGAGGATG+GGG - chr4_1:48582090-48582109 None:intergenic 40.0%
! GAGTTTCATTTTCCGAGGAT+GGG - chr4_1:48582091-48582110 None:intergenic 40.0%
! TGAGTTTCATTTTCCGAGGA+TGG - chr4_1:48582092-48582111 None:intergenic 40.0%
GACACGGGATAATTCAAATG+CGG + chr4_1:48568751-48568770 Msa0552110:intron 40.0%
TGCTTGGAGCAAGTTAATGT+TGG + chr4_1:48568818-48568837 Msa0552110:intron 40.0%
AACATAGGGTTTACAAAGGG+TGG + chr4_1:48569087-48569106 Msa0552110:intron 40.0%
! AACTCAAGCTCATGATGGAA+TGG - chr4_1:48569335-48569354 None:intergenic 40.0%
AGGTAAACTCAAGCTCATGA+TGG - chr4_1:48569340-48569359 None:intergenic 40.0%
GGAAAAAACTAGATTAGGGG+AGG - chr4_1:48569516-48569535 None:intergenic 40.0%
!!! CTACACAACTTTTTTGGGCA+AGG - chr4_1:48569537-48569556 None:intergenic 40.0%
! TCGACAAAGTATCAACCATG+AGG - chr4_1:48569682-48569701 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG - chr4_1:48570033-48570052 None:intergenic 40.0%
AACTGCCGAAATTGCATTGA+AGG - chr4_1:48570127-48570146 None:intergenic 40.0%
GTTCCTGAACATTGTAAACG+TGG + chr4_1:48570217-48570236 Msa0552110:intron 40.0%
TAGCCACGTTTACAATGTTC+AGG - chr4_1:48570223-48570242 None:intergenic 40.0%
GGCTAATTCTATCCAGAAAC+GGG + chr4_1:48570238-48570257 Msa0552110:intron 40.0%
TTAAAGACTCCCGTGAATGT+CGG - chr4_1:48570354-48570373 None:intergenic 40.0%
ACGGGAGTCTTTAAGTCATA+AGG + chr4_1:48570360-48570379 Msa0552110:intron 40.0%
ATAGTGATGATCAAGCGGAA+CGG + chr4_1:48584362-48584381 Msa0552110:three_prime_UTR 40.0%
GAAATAACCTGCTCAGATCT+GGG + chr4_1:48570646-48570665 Msa0552110:intron 40.0%
TATTGTAGGTCTGGATCGAG+GGG + chr4_1:48554046-48554065 Msa0552110:intron 45.0%
GTGCATAATCGCAGATGGAA+AGG - chr4_1:48555105-48555124 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:48555381-48555400 Msa0552110:intron 45.0%
!! CGGAGGGAGTACTTTATTAG+AGG + chr4_1:48555398-48555417 Msa0552110:intron 45.0%
CCCAAGCATTCACAAAAGCA+TGG - chr4_1:48578844-48578863 None:intergenic 45.0%
ACCCTAATCTACACGTGATC+TGG - chr4_1:48578770-48578789 None:intergenic 45.0%
!! TAGGGTATTGCATATTCCCC+GGG + chr4_1:48556099-48556118 Msa0552110:intron 45.0%
TTATTTGTGACACACTCCCG+GGG - chr4_1:48578737-48578756 None:intergenic 45.0%
CTTATTTGTGACACACTCCC+GGG - chr4_1:48578736-48578755 None:intergenic 45.0%
GCTTATTTGTGACACACTCC+CGG - chr4_1:48578735-48578754 None:intergenic 45.0%
TACCGTGATCGCTAGAAATG+AGG + chr4_1:48556186-48556205 Msa0552110:intron 45.0%
!! GTCCTCATTTCTAGCGATCA+CGG - chr4_1:48578664-48578683 None:intergenic 45.0%
CTAAGAAGTGGAAGAGGACT+TGG - chr4_1:48578596-48578615 None:intergenic 45.0%
CCCTAACTAAGAAGTGGAAG+AGG - chr4_1:48578590-48578609 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG + chr4_1:48556382-48556401 Msa0552110:intron 45.0%
GACCGTTCAAGAATTCGAAG+AGG - chr4_1:48556484-48556503 Msa0552120:CDS 45.0%
! ACCTGCAGCTTTGTGGTATT+GGG + chr4_1:48556504-48556523 Msa0552110:five_prime_UTR 45.0%
GTGAATTCAGACTCGCAAGT+GGG - chr4_1:48556561-48556580 Msa0552120:CDS 45.0%
TGTGAATTCAGACTCGCAAG+TGG - chr4_1:48556562-48556581 Msa0552120:CDS 45.0%
ACTTGCGAGTCTGAATTCAC+AGG + chr4_1:48556561-48556580 Msa0552110:five_prime_UTR 45.0%
CTTGCGAGTCTGAATTCACA+GGG + chr4_1:48556562-48556581 Msa0552110:five_prime_UTR 45.0%
TGCTTGGCTGACATCATCAT+GGG - chr4_1:48556589-48556608 Msa0552120:CDS 45.0%
TTGCTTGGCTGACATCATCA+TGG - chr4_1:48556590-48556609 Msa0552120:CDS 45.0%
! ATGATGATGTCAGCCAAGCA+AGG + chr4_1:48556589-48556608 Msa0552110:five_prime_UTR 45.0%
! CCATGTTATGTTGTGCCGTT+AGG - chr4_1:48556668-48556687 Msa0552120:CDS 45.0%
CCTAACGGCACAACATAACA+TGG + chr4_1:48556665-48556684 Msa0552110:five_prime_UTR 45.0%
AAAGTGGTTCAAGAGCTGCA+TGG - chr4_1:48556706-48556725 Msa0552120:CDS 45.0%
AAACAGGAAGATACCAGGAG+GGG - chr4_1:48556788-48556807 Msa0552120:intron 45.0%
! TACCGGGACTTTTGAACTGA+TGG - chr4_1:48557254-48557273 Msa0552120:intron 45.0%
TGGCCATACCTAATTGTGAC+TGG + chr4_1:48557592-48557611 Msa0552110:intron 45.0%
GCTTGCAATGCACTGTGTTA+AGG + chr4_1:48557680-48557699 Msa0552110:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG - chr4_1:48557729-48557748 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG - chr4_1:48557730-48557749 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG + chr4_1:48557732-48557751 Msa0552110:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG + chr4_1:48557787-48557806 Msa0552110:five_prime_UTR 45.0%
!! GCCGCGCTTTCTTTTTGAAA+AGG - chr4_1:48557821-48557840 None:intergenic 45.0%
GTGGAGTATAGATGGTCTCT+CGG + chr4_1:48558136-48558155 Msa0552110:exon 45.0%
CCTCGGAACAAAATGATAGC+AGG - chr4_1:48558287-48558306 None:intergenic 45.0%
! CCTGCTATCATTTTGTTCCG+AGG + chr4_1:48558284-48558303 Msa0552110:CDS 45.0%
TGTCTTCAAACACGACTCAC+GGG - chr4_1:48558561-48558580 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG - chr4_1:48558562-48558581 None:intergenic 45.0%
AGAAACGCACGGGTAACAAA+CGG - chr4_1:48558617-48558636 None:intergenic 45.0%
TGTGTGATCACCTCAATGCT+TGG + chr4_1:48558692-48558711 Msa0552110:intron 45.0%
GTGTGATCACCTCAATGCTT+GGG + chr4_1:48558693-48558712 Msa0552110:intron 45.0%
CGAAGTTCAGGTAGCTGTTA+AGG - chr4_1:48559048-48559067 Msa0552130:CDS 45.0%
GTTTAAGGAAGAACTGGGGA+AGG - chr4_1:48559108-48559127 Msa0552130:CDS 45.0%
!! CCTCGTCTTGTTTGGCATAA+TGG - chr4_1:48559377-48559396 Msa0552130:intron 45.0%
CCATTATGCCAAACAAGACG+AGG + chr4_1:48559374-48559393 Msa0552110:intron 45.0%
TGTCACTCATTGTGAAACGG+AGG + chr4_1:48559459-48559478 Msa0552110:intron 45.0%
GTCACTCATTGTGAAACGGA+GGG + chr4_1:48559460-48559479 Msa0552110:intron 45.0%
CGACACGAATTTGAATGCAC+AGG - chr4_1:48559545-48559564 Msa0552130:CDS 45.0%
GTGTCGAGATGTGTCTATGT+TGG + chr4_1:48559559-48559578 Msa0552110:intron 45.0%
GAAGCTGTGAGAGTAAAGGT+GGG - chr4_1:48559595-48559614 Msa0552130:CDS 45.0%
AGAAGCTGTGAGAGTAAAGG+TGG - chr4_1:48559596-48559615 Msa0552130:CDS 45.0%
TGCAGAAGCTGTGAGAGTAA+AGG - chr4_1:48559599-48559618 Msa0552130:CDS 45.0%
CAATACAAGGTCTTGGACTC+TGG + chr4_1:48559679-48559698 Msa0552110:intron 45.0%
ACTCTGGTACAGGACAACAA+GGG + chr4_1:48559695-48559714 Msa0552110:intron 45.0%
! TTTTCTTGTCTCAACGTGCC+GGG - chr4_1:48559767-48559786 Msa0552130:CDS 45.0%
! CTTTTCTTGTCTCAACGTGC+CGG - chr4_1:48559768-48559787 Msa0552130:CDS 45.0%
TATTACGCTGTTGGGAGAAC+GGG - chr4_1:48559872-48559891 Msa0552130:intron 45.0%
! GGCTCTGATACATACTAGGA+TGG - chr4_1:48560183-48560202 Msa0552130:intron 45.0%
! CTAGGGCTCTGATACATACT+AGG - chr4_1:48560187-48560206 Msa0552130:intron 45.0%
GAGGCAACATATACGCAGAA+GGG + chr4_1:48560262-48560281 Msa0552110:intron 45.0%
AGGCAACATATACGCAGAAG+GGG + chr4_1:48560263-48560282 Msa0552110:intron 45.0%
! TTGTCGCATTGTCGAGTTGT+CGG - chr4_1:48560465-48560484 Msa0552130:CDS 45.0%
CAACTAATGCATCATGCAGG+TGG + chr4_1:48560544-48560563 Msa0552110:intron 45.0%
CGTTGAATGCTAAGCATTCC+AGG + chr4_1:48560581-48560600 Msa0552110:intron 45.0%
GGCATAAGCCCCTTACAATT+TGG + chr4_1:48560603-48560622 Msa0552110:intron 45.0%
TTCATCATTCAACCCGTTGG+GGG - chr4_1:48560693-48560712 Msa0552130:intron 45.0%
GTTCATCATTCAACCCGTTG+GGG - chr4_1:48560694-48560713 Msa0552130:intron 45.0%
TGCATACTCACATCTGTTGG+GGG - chr4_1:48560732-48560751 Msa0552130:intron 45.0%
TTCACACATCACTACTGCCA+TGG + chr4_1:48561307-48561326 Msa0552110:intron 45.0%
TACGGAAACAGACTACACAG+TGG + chr4_1:48561506-48561525 Msa0552110:intron 45.0%
TGTCTTTCAAACCCAGGTCT+AGG + chr4_1:48561672-48561691 Msa0552110:intron 45.0%
TTTCAAACCCAGGTCTAGGT+TGG + chr4_1:48561676-48561695 Msa0552110:intron 45.0%
GTGCGAAATTGCAGACAGAT+TGG - chr4_1:48561706-48561725 None:intergenic 45.0%
CTGGGTTTCCAGATAGATCT+GGG - chr4_1:48561832-48561851 None:intergenic 45.0%
TCTGGGTTTCCAGATAGATC+TGG - chr4_1:48561833-48561852 None:intergenic 45.0%
TCTATCTGGAAACCCAGATC+TGG + chr4_1:48561835-48561854 Msa0552110:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48562049-48562068 Msa0552110:three_prime_UTR 45.0%
TATTGTAGGTCTGGATCGAG+GGG + chr4_1:48554046-48554065 Msa0552110:intron 45.0%
ACAGATAAGCCTCCAACTTG+CGG + chr4_1:48554591-48554610 Msa0552110:intron 45.0%
GTGCATAATCGCAGATGGAA+AGG - chr4_1:48555105-48555124 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:48555381-48555400 Msa0552110:intron 45.0%
!! CGGAGGGAGTACTTTATTAG+AGG + chr4_1:48555398-48555417 Msa0552110:intron 45.0%
CCCAAGCATTCACAAAAGCA+TGG - chr4_1:48578844-48578863 None:intergenic 45.0%
ACCCTAATCTACACGTGATC+TGG - chr4_1:48578770-48578789 None:intergenic 45.0%
!! TAGGGTATTGCATATTCCCC+GGG + chr4_1:48556099-48556118 Msa0552110:intron 45.0%
TTATTTGTGACACACTCCCG+GGG - chr4_1:48578737-48578756 None:intergenic 45.0%
CTTATTTGTGACACACTCCC+GGG - chr4_1:48578736-48578755 None:intergenic 45.0%
GCTTATTTGTGACACACTCC+CGG - chr4_1:48578735-48578754 None:intergenic 45.0%
TACCGTGATCGCTAGAAATG+AGG + chr4_1:48556186-48556205 Msa0552110:intron 45.0%
!! GTCCTCATTTCTAGCGATCA+CGG - chr4_1:48578664-48578683 None:intergenic 45.0%
CTAAGAAGTGGAAGAGGACT+TGG - chr4_1:48578596-48578615 None:intergenic 45.0%
CCCTAACTAAGAAGTGGAAG+AGG - chr4_1:48578590-48578609 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG + chr4_1:48556382-48556401 Msa0552110:intron 45.0%
GACCGTTCAAGAATTCGAAG+AGG - chr4_1:48556484-48556503 Msa0552120:CDS 45.0%
! ACCTGCAGCTTTGTGGTATT+GGG + chr4_1:48556504-48556523 Msa0552110:five_prime_UTR 45.0%
GTGAATTCAGACTCGCAAGT+GGG - chr4_1:48556561-48556580 Msa0552120:CDS 45.0%
TGTGAATTCAGACTCGCAAG+TGG - chr4_1:48556562-48556581 Msa0552120:CDS 45.0%
ACTTGCGAGTCTGAATTCAC+AGG + chr4_1:48556561-48556580 Msa0552110:five_prime_UTR 45.0%
CTTGCGAGTCTGAATTCACA+GGG + chr4_1:48556562-48556581 Msa0552110:five_prime_UTR 45.0%
TGCTTGGCTGACATCATCAT+GGG - chr4_1:48556589-48556608 Msa0552120:CDS 45.0%
TTGCTTGGCTGACATCATCA+TGG - chr4_1:48556590-48556609 Msa0552120:CDS 45.0%
! ATGATGATGTCAGCCAAGCA+AGG + chr4_1:48556589-48556608 Msa0552110:five_prime_UTR 45.0%
! CCATGTTATGTTGTGCCGTT+AGG - chr4_1:48556668-48556687 Msa0552120:CDS 45.0%
CCTAACGGCACAACATAACA+TGG + chr4_1:48556665-48556684 Msa0552110:five_prime_UTR 45.0%
AAAGTGGTTCAAGAGCTGCA+TGG - chr4_1:48556706-48556725 Msa0552120:CDS 45.0%
AAACAGGAAGATACCAGGAG+GGG - chr4_1:48556788-48556807 Msa0552120:intron 45.0%
! TACCGGGACTTTTGAACTGA+TGG - chr4_1:48557254-48557273 Msa0552120:intron 45.0%
TGGCCATACCTAATTGTGAC+TGG + chr4_1:48557592-48557611 Msa0552110:intron 45.0%
GCTTGCAATGCACTGTGTTA+AGG + chr4_1:48557680-48557699 Msa0552110:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG - chr4_1:48557729-48557748 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG - chr4_1:48557730-48557749 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG + chr4_1:48557732-48557751 Msa0552110:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG + chr4_1:48557787-48557806 Msa0552110:five_prime_UTR 45.0%
!! GCCGCGCTTTCTTTTTGAAA+AGG - chr4_1:48557821-48557840 None:intergenic 45.0%
GTGGAGTATAGATGGTCTCT+CGG + chr4_1:48558136-48558155 Msa0552110:exon 45.0%
CCTCGGAACAAAATGATAGC+AGG - chr4_1:48558287-48558306 None:intergenic 45.0%
! CCTGCTATCATTTTGTTCCG+AGG + chr4_1:48558284-48558303 Msa0552110:CDS 45.0%
TGTCTTCAAACACGACTCAC+GGG - chr4_1:48558561-48558580 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG - chr4_1:48558562-48558581 None:intergenic 45.0%
AGAAACGCACGGGTAACAAA+CGG - chr4_1:48558617-48558636 None:intergenic 45.0%
GTTCATTCTGTTTGCAGCTC+TGG + chr4_1:48567648-48567667 Msa0552110:intron 45.0%
TTCTTGGCCACACAGAACTA+CGG + chr4_1:48567774-48567793 Msa0552110:intron 45.0%
! TATGCAACCGTAGTTCTGTG+TGG - chr4_1:48567784-48567803 None:intergenic 45.0%
! CGGCTTGCAAGTGTTATTGA+TGG - chr4_1:48567812-48567831 None:intergenic 45.0%
TCAATAACACTTGCAAGCCG+AGG + chr4_1:48567812-48567831 Msa0552110:intron 45.0%
CAATAACACTTGCAAGCCGA+GGG + chr4_1:48567813-48567832 Msa0552110:intron 45.0%
TTCAGCTGGCACTTCTTGAT+CGG + chr4_1:48567848-48567867 Msa0552110:intron 45.0%
! GATCGGGAGTTTGATGATCT+AGG + chr4_1:48567865-48567884 Msa0552110:intron 45.0%
ATCTCTTCCTCGGACATAGA+AGG - chr4_1:48568064-48568083 None:intergenic 45.0%
CGTCATACGGTAACATCAAG+TGG - chr4_1:48568628-48568647 None:intergenic 45.0%
TTCATTTAGTGTGGAGTGGC+AGG + chr4_1:48568693-48568712 Msa0552110:intron 45.0%
TTCGTTTGTGGCAGAAGACA+CGG + chr4_1:48568735-48568754 Msa0552110:intron 45.0%
CGGGATAATTCAAATGCGGT+TGG + chr4_1:48568755-48568774 Msa0552110:intron 45.0%
AAACAGACCTGATGCAAGCA+GGG - chr4_1:48568863-48568882 None:intergenic 45.0%
! TGAGAAGAAATCTGGAGCGT+TGG + chr4_1:48569059-48569078 Msa0552110:intron 45.0%
!! GAGCGTTGGCATCTAACATA+GGG + chr4_1:48569073-48569092 Msa0552110:intron 45.0%
TGTAGATACCTGACCTTGCA+TGG + chr4_1:48569484-48569503 Msa0552110:intron 45.0%
AATTTCGGCAGTTACACCTG+AGG + chr4_1:48570134-48570153 Msa0552110:intron 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG + chr4_1:48570162-48570181 Msa0552110:intron 45.0%
TTTCACAAGAGCCTCGACTT+CGG - chr4_1:48570279-48570298 None:intergenic 45.0%
CACAACAAACCCGACATTCA+CGG + chr4_1:48570341-48570360 Msa0552110:intron 45.0%
ACAACAAACCCGACATTCAC+GGG + chr4_1:48570342-48570361 Msa0552110:intron 45.0%
TAAAGACTCCCGTGAATGTC+GGG - chr4_1:48570353-48570372 None:intergenic 45.0%
TAACACAGAGATCTGCGAAC+AGG + chr4_1:48570624-48570643 Msa0552110:intron 45.0%
GGAAATAACCTGCTCAGATC+TGG + chr4_1:48570645-48570664 Msa0552110:intron 45.0%
AGCTCACTTTCTCTCTCTAG+CGG - chr4_1:48570695-48570714 None:intergenic 45.0%
TATCTTTCTCTCTCTAGCGG+CGG - chr4_1:48570728-48570747 None:intergenic 45.0%
GTGGGTGACATTTGGGAATT+AGG - chr4_1:48570783-48570802 None:intergenic 45.0%
GATAGGCTTATTAGGACACG+TGG - chr4_1:48570802-48570821 None:intergenic 45.0%
GATCACGTGACCCACATAAT+AGG + chr4_1:48570845-48570864 Msa0552110:intron 45.0%
CAACCATGGCCCTATTATGT+GGG - chr4_1:48570858-48570877 None:intergenic 45.0%
TCAACCATGGCCCTATTATG+TGG - chr4_1:48570859-48570878 None:intergenic 45.0%
TCGGCATCATTCATCAACCA+TGG - chr4_1:48570872-48570891 None:intergenic 45.0%
AAATGTTAACCAGTGCCCCT+AGG + chr4_1:48571848-48571867 Msa0552110:intron 45.0%
AATGTTAACCAGTGCCCCTA+GGG + chr4_1:48571849-48571868 Msa0552110:intron 45.0%
TTGAAGTTAACTACCGCTGG+GGG - chr4_1:48572097-48572116 None:intergenic 45.0%
GTTGTGGTTCAAATGCTGGA+AGG - chr4_1:48572478-48572497 None:intergenic 45.0%
TCGTCCAACCATGAAAGTTG+TGG - chr4_1:48572494-48572513 None:intergenic 45.0%
TTCATGGTTGGACGATTCAC+AGG + chr4_1:48572499-48572518 Msa0552110:intron 45.0%
AGCTATCAATCGTGGGACTT+TGG - chr4_1:48572540-48572559 None:intergenic 45.0%
CTGCAGCTTGAAATGGTTAG+AGG - chr4_1:48572697-48572716 None:intergenic 45.0%
CGAAGTTCAGGTAGCTGTTA+AGG - chr4_1:48559048-48559067 Msa0552130:CDS 45.0%
GTTTAAGGAAGAACTGGGGA+AGG - chr4_1:48559108-48559127 Msa0552130:CDS 45.0%
!! CCTCGTCTTGTTTGGCATAA+TGG - chr4_1:48559377-48559396 Msa0552130:intron 45.0%
CCATTATGCCAAACAAGACG+AGG + chr4_1:48559374-48559393 Msa0552110:intron 45.0%
TGTCACTCATTGTGAAACGG+AGG + chr4_1:48559459-48559478 Msa0552110:intron 45.0%
GTCACTCATTGTGAAACGGA+GGG + chr4_1:48559460-48559479 Msa0552110:intron 45.0%
CGACACGAATTTGAATGCAC+AGG - chr4_1:48559545-48559564 Msa0552130:CDS 45.0%
GTGTCGAGATGTGTCTATGT+TGG + chr4_1:48559559-48559578 Msa0552110:intron 45.0%
GAAGCTGTGAGAGTAAAGGT+GGG - chr4_1:48559595-48559614 Msa0552130:CDS 45.0%
AGAAGCTGTGAGAGTAAAGG+TGG - chr4_1:48559596-48559615 Msa0552130:CDS 45.0%
TGCAGAAGCTGTGAGAGTAA+AGG - chr4_1:48559599-48559618 Msa0552130:CDS 45.0%
CAATACAAGGTCTTGGACTC+TGG + chr4_1:48559679-48559698 Msa0552110:intron 45.0%
ACTCTGGTACAGGACAACAA+GGG + chr4_1:48559695-48559714 Msa0552110:intron 45.0%
! TTTTCTTGTCTCAACGTGCC+GGG - chr4_1:48559767-48559786 Msa0552130:CDS 45.0%
! CTTTTCTTGTCTCAACGTGC+CGG - chr4_1:48559768-48559787 Msa0552130:CDS 45.0%
TATTACGCTGTTGGGAGAAC+GGG - chr4_1:48559872-48559891 Msa0552130:intron 45.0%
! GGCTCTGATACATACTAGGA+TGG - chr4_1:48560183-48560202 Msa0552130:intron 45.0%
! CTAGGGCTCTGATACATACT+AGG - chr4_1:48560187-48560206 Msa0552130:intron 45.0%
GAGGCAACATATACGCAGAA+GGG + chr4_1:48560262-48560281 Msa0552110:intron 45.0%
AGGCAACATATACGCAGAAG+GGG + chr4_1:48560263-48560282 Msa0552110:intron 45.0%
! TTGTCGCATTGTCGAGTTGT+CGG - chr4_1:48560465-48560484 Msa0552130:CDS 45.0%
CAACTAATGCATCATGCAGG+TGG + chr4_1:48560544-48560563 Msa0552110:intron 45.0%
CGTTGAATGCTAAGCATTCC+AGG + chr4_1:48560581-48560600 Msa0552110:intron 45.0%
GGCATAAGCCCCTTACAATT+TGG + chr4_1:48560603-48560622 Msa0552110:intron 45.0%
TTCATCATTCAACCCGTTGG+GGG - chr4_1:48560693-48560712 Msa0552130:intron 45.0%
GTTCATCATTCAACCCGTTG+GGG - chr4_1:48560694-48560713 Msa0552130:intron 45.0%
TGCATACTCACATCTGTTGG+GGG - chr4_1:48560732-48560751 Msa0552130:intron 45.0%
TTCACACATCACTACTGCCA+TGG + chr4_1:48561307-48561326 Msa0552110:intron 45.0%
TACGGAAACAGACTACACAG+TGG + chr4_1:48561506-48561525 Msa0552110:intron 45.0%
TGTCTTTCAAACCCAGGTCT+AGG + chr4_1:48561672-48561691 Msa0552110:intron 45.0%
TTTCAAACCCAGGTCTAGGT+TGG + chr4_1:48561676-48561695 Msa0552110:intron 45.0%
GTGCGAAATTGCAGACAGAT+TGG - chr4_1:48561706-48561725 None:intergenic 45.0%
CTGGGTTTCCAGATAGATCT+GGG - chr4_1:48561832-48561851 None:intergenic 45.0%
TCTGGGTTTCCAGATAGATC+TGG - chr4_1:48561833-48561852 None:intergenic 45.0%
TCTATCTGGAAACCCAGATC+TGG + chr4_1:48561835-48561854 Msa0552110:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48562049-48562068 Msa0552110:three_prime_UTR 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:48577144-48577163 Msa0552110:intron 45.0%
GTGCATAATCGCAGATGGAA+AGG - chr4_1:48555105-48555124 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG - chr4_1:48556382-48556401 Msa0552120:CDS 45.0%
CCCTAACTAAGAAGTGGAAG+AGG + chr4_1:48578590-48578609 Msa0552110:three_prime_UTR 45.0%
CTAAGAAGTGGAAGAGGACT+TGG + chr4_1:48578596-48578615 Msa0552110:three_prime_UTR 45.0%
!! GTCCTCATTTCTAGCGATCA+CGG + chr4_1:48578664-48578683 Msa0552110:three_prime_UTR 45.0%
TACCGTGATCGCTAGAAATG+AGG - chr4_1:48556186-48556205 None:intergenic 45.0%
GCTTATTTGTGACACACTCC+CGG + chr4_1:48578735-48578754 Msa0552110:three_prime_UTR 45.0%
CTTATTTGTGACACACTCCC+GGG + chr4_1:48578736-48578755 Msa0552110:three_prime_UTR 45.0%
TTATTTGTGACACACTCCCG+GGG + chr4_1:48578737-48578756 Msa0552110:three_prime_UTR 45.0%
!! TAGGGTATTGCATATTCCCC+GGG - chr4_1:48556099-48556118 None:intergenic 45.0%
ACCCTAATCTACACGTGATC+TGG + chr4_1:48578770-48578789 Msa0552110:three_prime_UTR 45.0%
CCCAAGCATTCACAAAAGCA+TGG + chr4_1:48578844-48578863 Msa0552110:three_prime_UTR 45.0%
GACCGTTCAAGAATTCGAAG+AGG - chr4_1:48556484-48556503 Msa0552120:CDS 45.0%
! CACCTGAAGCTTTGTGGTAT+TGG + chr4_1:48579298-48579317 Msa0552110:intron 45.0%
TCCCAATACCACAAAGCTTC+AGG - chr4_1:48579303-48579322 Msa0552150:CDS 45.0%
TGCTTGGCTGACATCATCAT+GGG - chr4_1:48556589-48556608 Msa0552120:CDS 45.0%
TTGCTTGGCTGACATCATCA+TGG - chr4_1:48556590-48556609 Msa0552120:CDS 45.0%
! ATGATGATGTCAGCCAAGCA+AGG + chr4_1:48556589-48556608 Msa0552110:five_prime_UTR 45.0%
! CCATGTTATGTTGTGCCGTT+AGG - chr4_1:48556668-48556687 Msa0552120:CDS 45.0%
CCTAACGGCACAACATAACA+TGG + chr4_1:48556665-48556684 Msa0552110:five_prime_UTR 45.0%
AAAGTGGTTCAAGAGCTGCA+TGG - chr4_1:48556706-48556725 Msa0552120:CDS 45.0%
GGGTACGATGATGAAGAAAC+TGG - chr4_1:48579566-48579585 Msa0552150:CDS 45.0%
AAACAGGAAGATACCAGGAG+GGG - chr4_1:48556788-48556807 Msa0552120:intron 45.0%
! TACCGGGACTTTTGAACTGA+TGG - chr4_1:48557254-48557273 Msa0552120:intron 45.0%
TGGCCATACCTAATTGTGAC+TGG + chr4_1:48557592-48557611 Msa0552110:intron 45.0%
GCTTGCAATGCACTGTGTTA+AGG + chr4_1:48557680-48557699 Msa0552110:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG - chr4_1:48557729-48557748 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG - chr4_1:48557730-48557749 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG + chr4_1:48557732-48557751 Msa0552110:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG + chr4_1:48557787-48557806 Msa0552110:five_prime_UTR 45.0%
AAGCGCGACATCTTTGTTAG+TGG + chr4_1:48580630-48580649 Msa0552110:three_prime_UTR 45.0%
ACATCTTTGTTAGTGGCAGC+AGG + chr4_1:48580637-48580656 Msa0552110:three_prime_UTR 45.0%
GTGGAGTATAGATGGTCTCT+CGG + chr4_1:48558136-48558155 Msa0552110:exon 45.0%
CCTCGGAACAAAATGATAGC+AGG - chr4_1:48558287-48558306 None:intergenic 45.0%
! CCTGCTATCATTTTGTTCCG+AGG + chr4_1:48558284-48558303 Msa0552110:CDS 45.0%
TGTCTTCAAACACGACTCAC+GGG - chr4_1:48558561-48558580 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG - chr4_1:48558562-48558581 None:intergenic 45.0%
AGAAACGCACGGGTAACAAA+CGG - chr4_1:48558617-48558636 None:intergenic 45.0%
GTTCATTCTGTTTGCAGCTC+TGG + chr4_1:48567648-48567667 Msa0552110:intron 45.0%
TTCTTGGCCACACAGAACTA+CGG + chr4_1:48567774-48567793 Msa0552110:intron 45.0%
! TATGCAACCGTAGTTCTGTG+TGG - chr4_1:48567784-48567803 None:intergenic 45.0%
! CGGCTTGCAAGTGTTATTGA+TGG - chr4_1:48567812-48567831 None:intergenic 45.0%
TCAATAACACTTGCAAGCCG+AGG + chr4_1:48567812-48567831 Msa0552110:intron 45.0%
CAATAACACTTGCAAGCCGA+GGG + chr4_1:48567813-48567832 Msa0552110:intron 45.0%
TTCAGCTGGCACTTCTTGAT+CGG + chr4_1:48567848-48567867 Msa0552110:intron 45.0%
! GATCGGGAGTTTGATGATCT+AGG + chr4_1:48567865-48567884 Msa0552110:intron 45.0%
ATCTCTTCCTCGGACATAGA+AGG - chr4_1:48568064-48568083 None:intergenic 45.0%
CGTCATACGGTAACATCAAG+TGG - chr4_1:48568628-48568647 None:intergenic 45.0%
TTCATTTAGTGTGGAGTGGC+AGG + chr4_1:48568693-48568712 Msa0552110:intron 45.0%
TTCGTTTGTGGCAGAAGACA+CGG + chr4_1:48568735-48568754 Msa0552110:intron 45.0%
CGGGATAATTCAAATGCGGT+TGG + chr4_1:48568755-48568774 Msa0552110:intron 45.0%
AAACAGACCTGATGCAAGCA+GGG - chr4_1:48568863-48568882 None:intergenic 45.0%
! TGAGAAGAAATCTGGAGCGT+TGG + chr4_1:48569059-48569078 Msa0552110:intron 45.0%
!! GAGCGTTGGCATCTAACATA+GGG + chr4_1:48569073-48569092 Msa0552110:intron 45.0%
TAGGGTTTACAAAGGGTGGA+CGG + chr4_1:48569091-48569110 Msa0552110:intron 45.0%
TGTAGATACCTGACCTTGCA+TGG + chr4_1:48569484-48569503 Msa0552110:intron 45.0%
AATTTCGGCAGTTACACCTG+AGG + chr4_1:48570134-48570153 Msa0552110:intron 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG + chr4_1:48570162-48570181 Msa0552110:intron 45.0%
TTTCACAAGAGCCTCGACTT+CGG - chr4_1:48570279-48570298 None:intergenic 45.0%
CACAACAAACCCGACATTCA+CGG + chr4_1:48570341-48570360 Msa0552110:intron 45.0%
ACAACAAACCCGACATTCAC+GGG + chr4_1:48570342-48570361 Msa0552110:intron 45.0%
TAAAGACTCCCGTGAATGTC+GGG - chr4_1:48570353-48570372 None:intergenic 45.0%
TAACACAGAGATCTGCGAAC+AGG + chr4_1:48570624-48570643 Msa0552110:intron 45.0%
GGAAATAACCTGCTCAGATC+TGG + chr4_1:48570645-48570664 Msa0552110:intron 45.0%
AGCTCACTTTCTCTCTCTAG+CGG - chr4_1:48570695-48570714 None:intergenic 45.0%
!! TTTATTCATATTATAAAATA+TGG - chr4_1:48569992-48570011 None:intergenic 5.0%
!! TTTATTCATATTATAAAATA+TGG - chr4_1:48569992-48570011 None:intergenic 5.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48553423-48553442 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTATGTTAG+AGG + chr4_1:48553587-48553606 Msa0552110:intron 50.0%
! GCACGGGTGTTGTATGTATC+AGG + chr4_1:48553744-48553763 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48553909-48553928 Msa0552110:five_prime_UTR 50.0%
! GCAGGGATGTTGTTTGTCTC+AGG + chr4_1:48554076-48554095 Msa0552110:five_prime_UTR 50.0%
! ACGCTACCCCCAACTTTTCA+AGG + chr4_1:48554465-48554484 Msa0552110:intron 50.0%
GGACAAATCAGAACAGTGGG+TGG - chr4_1:48578642-48578661 None:intergenic 50.0%
CATGGGCCCTAACTAAGAAG+TGG - chr4_1:48578584-48578603 None:intergenic 50.0%
! CACCTGCAGCTTTGTGGTAT+TGG + chr4_1:48556503-48556522 Msa0552110:five_prime_UTR 50.0%
TCCCAATACCACAAAGCTGC+AGG - chr4_1:48556508-48556527 Msa0552120:CDS 50.0%
GCTTGGCTGACATCATCATG+GGG - chr4_1:48556588-48556607 Msa0552120:CDS 50.0%
TGTCAGCCAAGCAAGGTACA+AGG + chr4_1:48556596-48556615 Msa0552110:five_prime_UTR 50.0%
GTCAGCCAAGCAAGGTACAA+GGG + chr4_1:48556597-48556616 Msa0552110:five_prime_UTR 50.0%
AGGTACCCTTGTACCTTGCT+TGG - chr4_1:48556605-48556624 Msa0552120:CDS 50.0%
TAGGCAGATTGATGGAGGCA+AGG - chr4_1:48556649-48556668 Msa0552120:CDS 50.0%
GCCTCCATCAATCTGCCTAA+CGG + chr4_1:48556650-48556669 Msa0552110:five_prime_UTR 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG - chr4_1:48556657-48556676 Msa0552120:CDS 50.0%
! GAGGGGTACGATGAAGAAAC+TGG - chr4_1:48556771-48556790 Msa0552120:CDS 50.0%
TTTCTTCATCGTACCCCTCC+TGG + chr4_1:48556772-48556791 Msa0552110:intron 50.0%
! GCTTTGCAGGTTCGGGTTTA+CGG + chr4_1:48557536-48557555 Msa0552110:intron 50.0%
ACAATGCCCACATGCTGTAC+AGG + chr4_1:48557720-48557739 Msa0552110:intron 50.0%
AAGCGCGGCATCTTTGTTAG+TGG + chr4_1:48557832-48557851 Msa0552110:five_prime_UTR 50.0%
GCATCTTTGTTAGTGGCAGC+AGG + chr4_1:48557839-48557858 Msa0552110:five_prime_UTR 50.0%
GATGTGGCAGCTCCAATTAG+TGG + chr4_1:48558161-48558180 Msa0552110:CDS 50.0%
AGCTCCAATTAGTGGCTCTC+AGG + chr4_1:48558169-48558188 Msa0552110:CDS 50.0%
CCAACCTGAGAGCCACTAAT+TGG - chr4_1:48558176-48558195 None:intergenic 50.0%
CCAATTAGTGGCTCTCAGGT+TGG + chr4_1:48558173-48558192 Msa0552110:intron 50.0%
ACAAGCAGTGCCATCCTGAT+TGG - chr4_1:48558502-48558521 None:intergenic 50.0%
AGGATGGCACTGCTTGTGTT+TGG + chr4_1:48558505-48558524 Msa0552110:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG + chr4_1:48558619-48558638 Msa0552110:three_prime_UTR 50.0%
TCCTACCACAAGAAACGCAC+GGG - chr4_1:48558627-48558646 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG - chr4_1:48558628-48558647 None:intergenic 50.0%
AGACGGAAACAAACGAGCCT+TGG - chr4_1:48558922-48558941 Msa0552130:CDS 50.0%
CTATGTGCAGGTGGAATCCT+AGG - chr4_1:48559290-48559309 Msa0552130:intron 50.0%
!! CACAGGCATCGGTAAAGGTA+TGG - chr4_1:48559528-48559547 Msa0552130:intron 50.0%
!! GAATGCACAGGCATCGGTAA+AGG - chr4_1:48559533-48559552 Msa0552130:CDS 50.0%
GAGTAAAGGTGGGCAATGCA+AGG - chr4_1:48559585-48559604 Msa0552130:CDS 50.0%
CTCTCACAGCTTCTGCAGTA+TGG + chr4_1:48559602-48559621 Msa0552110:intron 50.0%
ACGTTGATGCGGGTCTCAAT+TGG - chr4_1:48559634-48559653 Msa0552130:CDS 50.0%
AAGGTCTTGGACTCTGGTAC+AGG + chr4_1:48559685-48559704 Msa0552110:intron 50.0%
GACTCTGGTACAGGACAACA+AGG + chr4_1:48559694-48559713 Msa0552110:intron 50.0%
ATTACGCTGTTGGGAGAACG+GGG - chr4_1:48559871-48559890 Msa0552130:intron 50.0%
! TTGGTCGGCTCAAGTGTCTA+GGG - chr4_1:48560204-48560223 Msa0552130:intron 50.0%
! TTTGGTCGGCTCAAGTGTCT+AGG - chr4_1:48560205-48560224 Msa0552130:intron 50.0%
CAGTACCTGCACATTACCCA+CGG + chr4_1:48560237-48560256 Msa0552110:intron 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr4_1:48560256-48560275 Msa0552130:intron 50.0%
CGAGGCAACATATACGCAGA+AGG + chr4_1:48560261-48560280 Msa0552110:intron 50.0%
AGCATTCAACGCGCGTAGAT+TGG - chr4_1:48560572-48560591 Msa0552130:intron 50.0%
ATTGTAAGGGGCTTATGCCC+TGG - chr4_1:48560602-48560621 Msa0552130:intron 50.0%
TGGGTTTCCAACCTAGACCT+GGG - chr4_1:48561686-48561705 None:intergenic 50.0%
TTGGGTTTCCAACCTAGACC+TGG - chr4_1:48561687-48561706 None:intergenic 50.0%
AAGTGCAAGTCGCCAGATCT+GGG - chr4_1:48561850-48561869 None:intergenic 50.0%
TGGATCAAGGGACATGATGC+AGG + chr4_1:48562192-48562211 Msa0552110:intron 50.0%
GGATCAAGGGACATGATGCA+GGG + chr4_1:48562193-48562212 Msa0552110:intron 50.0%
GATCAAGGGACATGATGCAG+GGG + chr4_1:48562194-48562213 Msa0552110:intron 50.0%
!! GCAGGGGTGTTGTATGTTAC+AGG + chr4_1:48562210-48562229 Msa0552110:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48553423-48553442 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTATGTTAG+AGG + chr4_1:48553587-48553606 Msa0552110:intron 50.0%
! GCACGGGTGTTGTATGTATC+AGG + chr4_1:48553744-48553763 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48553909-48553928 Msa0552110:five_prime_UTR 50.0%
! GCAGGGATGTTGTTTGTCTC+AGG + chr4_1:48554076-48554095 Msa0552110:five_prime_UTR 50.0%
! ACGCTACCCCCAACTTTTCA+AGG + chr4_1:48554465-48554484 Msa0552110:intron 50.0%
GGACAAATCAGAACAGTGGG+TGG - chr4_1:48578642-48578661 None:intergenic 50.0%
CATGGGCCCTAACTAAGAAG+TGG - chr4_1:48578584-48578603 None:intergenic 50.0%
! CACCTGCAGCTTTGTGGTAT+TGG + chr4_1:48556503-48556522 Msa0552110:five_prime_UTR 50.0%
TCCCAATACCACAAAGCTGC+AGG - chr4_1:48556508-48556527 Msa0552120:CDS 50.0%
GCTTGGCTGACATCATCATG+GGG - chr4_1:48556588-48556607 Msa0552120:CDS 50.0%
TGTCAGCCAAGCAAGGTACA+AGG + chr4_1:48556596-48556615 Msa0552110:five_prime_UTR 50.0%
GTCAGCCAAGCAAGGTACAA+GGG + chr4_1:48556597-48556616 Msa0552110:five_prime_UTR 50.0%
AGGTACCCTTGTACCTTGCT+TGG - chr4_1:48556605-48556624 Msa0552120:CDS 50.0%
TAGGCAGATTGATGGAGGCA+AGG - chr4_1:48556649-48556668 Msa0552120:CDS 50.0%
GCCTCCATCAATCTGCCTAA+CGG + chr4_1:48556650-48556669 Msa0552110:five_prime_UTR 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG - chr4_1:48556657-48556676 Msa0552120:CDS 50.0%
! GAGGGGTACGATGAAGAAAC+TGG - chr4_1:48556771-48556790 Msa0552120:CDS 50.0%
TTTCTTCATCGTACCCCTCC+TGG + chr4_1:48556772-48556791 Msa0552110:intron 50.0%
! GCTTTGCAGGTTCGGGTTTA+CGG + chr4_1:48557536-48557555 Msa0552110:intron 50.0%
ACAATGCCCACATGCTGTAC+AGG + chr4_1:48557720-48557739 Msa0552110:intron 50.0%
AAGCGCGGCATCTTTGTTAG+TGG + chr4_1:48557832-48557851 Msa0552110:five_prime_UTR 50.0%
GCATCTTTGTTAGTGGCAGC+AGG + chr4_1:48557839-48557858 Msa0552110:five_prime_UTR 50.0%
GATGTGGCAGCTCCAATTAG+TGG + chr4_1:48558161-48558180 Msa0552110:CDS 50.0%
AGCTCCAATTAGTGGCTCTC+AGG + chr4_1:48558169-48558188 Msa0552110:CDS 50.0%
CCAACCTGAGAGCCACTAAT+TGG - chr4_1:48558176-48558195 None:intergenic 50.0%
CCAATTAGTGGCTCTCAGGT+TGG + chr4_1:48558173-48558192 Msa0552110:intron 50.0%
ACAAGCAGTGCCATCCTGAT+TGG - chr4_1:48558502-48558521 None:intergenic 50.0%
AGGATGGCACTGCTTGTGTT+TGG + chr4_1:48558505-48558524 Msa0552110:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG + chr4_1:48558619-48558638 Msa0552110:three_prime_UTR 50.0%
TCCTACCACAAGAAACGCAC+GGG - chr4_1:48558627-48558646 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG - chr4_1:48558628-48558647 None:intergenic 50.0%
! GTAGTTCTGTGTGGCCAAGA+AGG - chr4_1:48567775-48567794 None:intergenic 50.0%
TCAGCTGGCACTTCTTGATC+GGG + chr4_1:48567849-48567868 Msa0552110:intron 50.0%
TACTGCACCTTCTATGTCCG+AGG + chr4_1:48568054-48568073 Msa0552110:intron 50.0%
TCGTTTGTGGCAGAAGACAC+GGG + chr4_1:48568736-48568755 Msa0552110:intron 50.0%
GCAAGTGAGCTCATCATCAG+AGG - chr4_1:48568792-48568811 None:intergenic 50.0%
GCTCACTTGCAGTGTATGCT+TGG + chr4_1:48568802-48568821 Msa0552110:intron 50.0%
GAAACAGACCTGATGCAAGC+AGG - chr4_1:48568864-48568883 None:intergenic 50.0%
!! GGAGCGTTGGCATCTAACAT+AGG + chr4_1:48569072-48569091 Msa0552110:intron 50.0%
! AGGCTAGTTGCATTGATCCC+TGG + chr4_1:48569758-48569777 Msa0552110:intron 50.0%
CGAGGCTACATACAATCCTC+AGG - chr4_1:48570153-48570172 None:intergenic 50.0%
! TAGCCTCGAAGCTTTGTAGG+TGG + chr4_1:48570165-48570184 Msa0552110:intron 50.0%
GTTCCACCTACAAAGCTTCG+AGG - chr4_1:48570171-48570190 None:intergenic 50.0%
GTAGGTGGAACAGAGATTGC+CGG + chr4_1:48570180-48570199 Msa0552110:intron 50.0%
CTATGCACTAGTCCCGTTTC+TGG - chr4_1:48570253-48570272 None:intergenic 50.0%
!! CGTGAATGTCGGGTTTGTTG+TGG - chr4_1:48570343-48570362 None:intergenic 50.0%
GCTCACTTTCTCTCTCTAGC+GGG - chr4_1:48570694-48570713 None:intergenic 50.0%
AGGACACGTGGGTGACATTT+GGG - chr4_1:48570790-48570809 None:intergenic 50.0%
TAGGACACGTGGGTGACATT+TGG - chr4_1:48570791-48570810 None:intergenic 50.0%
TGACCCACATAATAGGGCCA+TGG + chr4_1:48570852-48570871 Msa0552110:intron 50.0%
TTCCTTAACCAGTGCCCTAG+GGG - chr4_1:48571866-48571885 None:intergenic 50.0%
CTTCCTTAACCAGTGCCCTA+GGG - chr4_1:48571867-48571886 None:intergenic 50.0%
ACGTCTAGCACCTGTTCTAG+TGG + chr4_1:48572396-48572415 Msa0552110:intron 50.0%
TCTGCAACTGCCACTAGAAC+AGG - chr4_1:48572409-48572428 None:intergenic 50.0%
! TGGGACTTTGGTGCATTCAG+TGG - chr4_1:48572528-48572547 None:intergenic 50.0%
TGTGTCAATGACCGCAGCTA+GGG - chr4_1:48572805-48572824 None:intergenic 50.0%
TTGTGTCAATGACCGCAGCT+AGG - chr4_1:48572806-48572825 None:intergenic 50.0%
AGACGGAAACAAACGAGCCT+TGG - chr4_1:48558922-48558941 Msa0552130:CDS 50.0%
CTATGTGCAGGTGGAATCCT+AGG - chr4_1:48559290-48559309 Msa0552130:intron 50.0%
!! CACAGGCATCGGTAAAGGTA+TGG - chr4_1:48559528-48559547 Msa0552130:intron 50.0%
!! GAATGCACAGGCATCGGTAA+AGG - chr4_1:48559533-48559552 Msa0552130:CDS 50.0%
GAGTAAAGGTGGGCAATGCA+AGG - chr4_1:48559585-48559604 Msa0552130:CDS 50.0%
CTCTCACAGCTTCTGCAGTA+TGG + chr4_1:48559602-48559621 Msa0552110:intron 50.0%
ACGTTGATGCGGGTCTCAAT+TGG - chr4_1:48559634-48559653 Msa0552130:CDS 50.0%
AAGGTCTTGGACTCTGGTAC+AGG + chr4_1:48559685-48559704 Msa0552110:intron 50.0%
GACTCTGGTACAGGACAACA+AGG + chr4_1:48559694-48559713 Msa0552110:intron 50.0%
ATTACGCTGTTGGGAGAACG+GGG - chr4_1:48559871-48559890 Msa0552130:intron 50.0%
! TTGGTCGGCTCAAGTGTCTA+GGG - chr4_1:48560204-48560223 Msa0552130:intron 50.0%
! TTTGGTCGGCTCAAGTGTCT+AGG - chr4_1:48560205-48560224 Msa0552130:intron 50.0%
CAGTACCTGCACATTACCCA+CGG + chr4_1:48560237-48560256 Msa0552110:intron 50.0%
GTATATGTTGCCTCGACCGT+GGG - chr4_1:48560256-48560275 Msa0552130:intron 50.0%
CGAGGCAACATATACGCAGA+AGG + chr4_1:48560261-48560280 Msa0552110:intron 50.0%
AGCATTCAACGCGCGTAGAT+TGG - chr4_1:48560572-48560591 Msa0552130:intron 50.0%
ATTGTAAGGGGCTTATGCCC+TGG - chr4_1:48560602-48560621 Msa0552130:intron 50.0%
TGGGTTTCCAACCTAGACCT+GGG - chr4_1:48561686-48561705 None:intergenic 50.0%
TTGGGTTTCCAACCTAGACC+TGG - chr4_1:48561687-48561706 None:intergenic 50.0%
AAGTGCAAGTCGCCAGATCT+GGG - chr4_1:48561850-48561869 None:intergenic 50.0%
TGGATCAAGGGACATGATGC+AGG + chr4_1:48562192-48562211 Msa0552110:intron 50.0%
GGATCAAGGGACATGATGCA+GGG + chr4_1:48562193-48562212 Msa0552110:intron 50.0%
GATCAAGGGACATGATGCAG+GGG + chr4_1:48562194-48562213 Msa0552110:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48553423-48553442 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTATGTTAG+AGG + chr4_1:48553587-48553606 Msa0552110:intron 50.0%
! GCACGGGTGTTGTATGTATC+AGG + chr4_1:48553744-48553763 Msa0552110:five_prime_UTR 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48553909-48553928 Msa0552110:five_prime_UTR 50.0%
! GCAGGGATGTTGTTTGTCTC+AGG + chr4_1:48554076-48554095 Msa0552110:five_prime_UTR 50.0%
! ACGCTACCCCCAACTTTTCA+AGG + chr4_1:48554465-48554484 Msa0552110:intron 50.0%
CATGGGCCCTAACTAAGAAG+TGG + chr4_1:48578584-48578603 Msa0552110:three_prime_UTR 50.0%
GGACAAATCAGAACAGTGGG+TGG + chr4_1:48578642-48578661 Msa0552110:three_prime_UTR 50.0%
! TCGAAGAGGCACAGAGCTAT+AGG - chr4_1:48579265-48579284 Msa0552150:CDS 50.0%
AACGGTCACCTGAAGCTTTG+TGG + chr4_1:48579292-48579311 Msa0552110:intron 50.0%
GCTTGGCTGACATCATCATG+GGG - chr4_1:48556588-48556607 Msa0552120:CDS 50.0%
TGTCAGCCAAGCAAGGTACA+AGG + chr4_1:48556596-48556615 Msa0552110:five_prime_UTR 50.0%
GTCAGCCAAGCAAGGTACAA+GGG + chr4_1:48556597-48556616 Msa0552110:five_prime_UTR 50.0%
AGGTACCCTTGTACCTTGCT+TGG - chr4_1:48556605-48556624 Msa0552120:CDS 50.0%
TAGGCAGATTGATGGAGGCA+AGG - chr4_1:48556649-48556668 Msa0552120:CDS 50.0%
GCCTCCATCAATCTGCCTAA+CGG + chr4_1:48556650-48556669 Msa0552110:five_prime_UTR 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG - chr4_1:48556657-48556676 Msa0552120:CDS 50.0%
! GCTTTGCAGGTTCGGGTTTA+CGG + chr4_1:48557536-48557555 Msa0552110:intron 50.0%
ACAATGCCCACATGCTGTAC+AGG + chr4_1:48557720-48557739 Msa0552110:intron 50.0%
GATGTGGCAGCTCCAATTAG+TGG + chr4_1:48558161-48558180 Msa0552110:CDS 50.0%
ACAAGCAGTGCGATCCTGAT+TGG - chr4_1:48581300-48581319 None:intergenic 50.0%
AGGATCGCACTGCTTGTGTT+TGG + chr4_1:48581303-48581322 Msa0552110:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG + chr4_1:48558619-48558638 Msa0552110:three_prime_UTR 50.0%
TCCTACCACAAGAAACGCAC+GGG - chr4_1:48558627-48558646 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG - chr4_1:48558628-48558647 None:intergenic 50.0%
! GTAGTTCTGTGTGGCCAAGA+AGG - chr4_1:48567775-48567794 None:intergenic 50.0%
TCAGCTGGCACTTCTTGATC+GGG + chr4_1:48567849-48567868 Msa0552110:intron 50.0%
TACTGCACCTTCTATGTCCG+AGG + chr4_1:48568054-48568073 Msa0552110:intron 50.0%
TCGTTTGTGGCAGAAGACAC+GGG + chr4_1:48568736-48568755 Msa0552110:intron 50.0%
GCAAGTGAGCTCATCATCAG+AGG - chr4_1:48568792-48568811 None:intergenic 50.0%
GCTCACTTGCAGTGTATGCT+TGG + chr4_1:48568802-48568821 Msa0552110:intron 50.0%
GAAACAGACCTGATGCAAGC+AGG - chr4_1:48568864-48568883 None:intergenic 50.0%
!! GGAGCGTTGGCATCTAACAT+AGG + chr4_1:48569072-48569091 Msa0552110:intron 50.0%
! AGGCTAGTTGCATTGATCCC+TGG + chr4_1:48569758-48569777 Msa0552110:intron 50.0%
CGAGGCTACATACAATCCTC+AGG - chr4_1:48570153-48570172 None:intergenic 50.0%
! TAGCCTCGAAGCTTTGTAGG+TGG + chr4_1:48570165-48570184 Msa0552110:intron 50.0%
GTTCCACCTACAAAGCTTCG+AGG - chr4_1:48570171-48570190 None:intergenic 50.0%
GTAGGTGGAACAGAGATTGC+CGG + chr4_1:48570180-48570199 Msa0552110:intron 50.0%
CTATGCACTAGTCCCGTTTC+TGG - chr4_1:48570253-48570272 None:intergenic 50.0%
!! CGTGAATGTCGGGTTTGTTG+TGG - chr4_1:48570343-48570362 None:intergenic 50.0%
GCTCACTTTCTCTCTCTAGC+GGG - chr4_1:48570694-48570713 None:intergenic 50.0%
TGGATCAAGGGACACGATGC+AGG + chr4_1:48553569-48553588 Msa0552110:intron 55.0%
GGATCAAGGGACACGATGCA+GGG + chr4_1:48553570-48553589 Msa0552110:intron 55.0%
GATCAAGGGACACGATGCAG+GGG + chr4_1:48553571-48553590 Msa0552110:intron 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48554059-48554078 Msa0552110:five_prime_UTR 55.0%
! ATGGAAAGGCGGCAAGTTGG+AGG - chr4_1:48554603-48554622 None:intergenic 55.0%
CAGATGGAAAGGCGGCAAGT+TGG - chr4_1:48554606-48554625 None:intergenic 55.0%
AACGGTCACCTGCAGCTTTG+TGG + chr4_1:48556497-48556516 Msa0552110:five_prime_UTR 55.0%
GCCGTTAGGCAGATTGATGG+AGG - chr4_1:48556654-48556673 Msa0552120:CDS 55.0%
GCCCACATGCTGTACAGGTT+AGG + chr4_1:48557725-48557744 Msa0552110:intron 55.0%
AGATGGTCTCTCGGACGATG+TGG + chr4_1:48558145-48558164 Msa0552110:exon 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG + chr4_1:48558623-48558642 Msa0552110:intron 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG + chr4_1:48558626-48558645 Msa0552110:intron 55.0%
TCATGTCAACGTGGCTCGCT+TGG - chr4_1:48558958-48558977 Msa0552130:CDS 55.0%
! GAACTGGGGAAGGGAGCTTT+TGG - chr4_1:48559098-48559117 Msa0552130:CDS 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr4_1:48560257-48560276 Msa0552130:intron 55.0%
!! TCGAGTTGTCGGTGTCGTTG+TGG - chr4_1:48560454-48560473 Msa0552130:CDS 55.0%
CTGTTGGGGGCTTATGCTCT+GGG - chr4_1:48560642-48560661 Msa0552130:intron 55.0%
GCGTGCAAGTACAGCCACTT+AGG - chr4_1:48561613-48561632 None:intergenic 55.0%
GAAGTGCAAGTCGCCAGATC+TGG - chr4_1:48561851-48561870 None:intergenic 55.0%
TGGATCAAGGGACACGATGC+AGG + chr4_1:48553569-48553588 Msa0552110:intron 55.0%
GGATCAAGGGACACGATGCA+GGG + chr4_1:48553570-48553589 Msa0552110:intron 55.0%
GATCAAGGGACACGATGCAG+GGG + chr4_1:48553571-48553590 Msa0552110:intron 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48554059-48554078 Msa0552110:five_prime_UTR 55.0%
! ATGGAAAGGCCGCAAGTTGG+AGG - chr4_1:48563539-48563558 None:intergenic 55.0%
CAGATGGAAAGGCCGCAAGT+TGG - chr4_1:48563542-48563561 None:intergenic 55.0%
AACGGTCACCTGCAGCTTTG+TGG + chr4_1:48556497-48556516 Msa0552110:five_prime_UTR 55.0%
GCCGTTAGGCAGATTGATGG+AGG - chr4_1:48556654-48556673 Msa0552120:CDS 55.0%
GCCCACATGCTGTACAGGTT+AGG + chr4_1:48557725-48557744 Msa0552110:intron 55.0%
AGATGGTCTCTCGGACGATG+TGG + chr4_1:48558145-48558164 Msa0552110:exon 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG + chr4_1:48558623-48558642 Msa0552110:intron 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG + chr4_1:48558626-48558645 Msa0552110:intron 55.0%
! TTGCAGCTCTGGCTAGTGCT+TGG + chr4_1:48567659-48567678 Msa0552110:intron 55.0%
! TGAAGTCTGAGACACGCCCT+CGG - chr4_1:48567832-48567851 None:intergenic 55.0%
! TAGCTTGCCCTGCTTGCATC+AGG + chr4_1:48568853-48568872 Msa0552110:intron 55.0%
! GTTGCATTGATCCCTGGCTG+CGG + chr4_1:48569764-48569783 Msa0552110:intron 55.0%
CTGCGGCAACAAGGGATTTG+CGG + chr4_1:48569781-48569800 Msa0552110:intron 55.0%
GTGCATAGAAGCCGAAGTCG+AGG + chr4_1:48570265-48570284 Msa0552110:intron 55.0%
TCTCTCTCCCAGATCTGAGC+AGG - chr4_1:48570656-48570675 None:intergenic 55.0%
GCTTCCTTAACCAGTGCCCT+AGG - chr4_1:48571868-48571887 None:intergenic 55.0%
GGTTTCCTTAACCAGTGCCC+CGG + chr4_1:48571977-48571996 Msa0552110:intron 55.0%
GTTTCCTTAACCAGTGCCCC+GGG + chr4_1:48571978-48571997 Msa0552110:intron 55.0%
TTTCCTTAACCAGTGCCCCG+GGG + chr4_1:48571979-48571998 Msa0552110:intron 55.0%
TTGTGTTAACCTGTGCCCCC+GGG - chr4_1:48571998-48572017 None:intergenic 55.0%
GTTGTGTTAACCTGTGCCCC+CGG - chr4_1:48571999-48572018 None:intergenic 55.0%
! CGGAGATGACATCTAGCTCC+AGG + chr4_1:48572368-48572387 Msa0552110:intron 55.0%
AGGTGCTAGACGTCTGAACC+TGG - chr4_1:48572389-48572408 None:intergenic 55.0%
CGGGATGCTGCAGCTTGAAA+TGG - chr4_1:48572704-48572723 None:intergenic 55.0%
CTTTGGGTACACTGCGACAG+AGG - chr4_1:48572779-48572798 None:intergenic 55.0%
ACCCAAAGTTCCCCTAGCTG+CGG + chr4_1:48572791-48572810 Msa0552110:intron 55.0%
ACCGCAGCTAGGGGAACTTT+GGG - chr4_1:48572795-48572814 None:intergenic 55.0%
GTGTCAATGACCGCAGCTAG+GGG - chr4_1:48572804-48572823 None:intergenic 55.0%
TCATGTCAACGTGGCTCGCT+TGG - chr4_1:48558958-48558977 Msa0552130:CDS 55.0%
! GAACTGGGGAAGGGAGCTTT+TGG - chr4_1:48559098-48559117 Msa0552130:CDS 55.0%
CGTATATGTTGCCTCGACCG+TGG - chr4_1:48560257-48560276 Msa0552130:intron 55.0%
!! TCGAGTTGTCGGTGTCGTTG+TGG - chr4_1:48560454-48560473 Msa0552130:CDS 55.0%
CTGTTGGGGGCTTATGCTCT+GGG - chr4_1:48560642-48560661 Msa0552130:intron 55.0%
GCGTGCAAGTACAGCCACTT+AGG - chr4_1:48561613-48561632 None:intergenic 55.0%
GAAGTGCAAGTCGCCAGATC+TGG - chr4_1:48561851-48561870 None:intergenic 55.0%
TGGATCAAGGGACACGATGC+AGG + chr4_1:48553569-48553588 Msa0552110:intron 55.0%
GGATCAAGGGACACGATGCA+GGG + chr4_1:48553570-48553589 Msa0552110:intron 55.0%
GATCAAGGGACACGATGCAG+GGG + chr4_1:48553571-48553590 Msa0552110:intron 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48554059-48554078 Msa0552110:five_prime_UTR 55.0%
! ATGGAAAGGCGGCAAGTTGG+AGG - chr4_1:48554603-48554622 None:intergenic 55.0%
CAGATGGAAAGGCGGCAAGT+TGG - chr4_1:48554606-48554625 None:intergenic 55.0%
GCCGTTAGGCAGATTGATGG+AGG - chr4_1:48556654-48556673 Msa0552120:CDS 55.0%
CTTCATCATCGTACCCCTCC+TGG + chr4_1:48579570-48579589 Msa0552110:intron 55.0%
GCCCACATGCTGTACAGGTT+AGG + chr4_1:48557725-48557744 Msa0552110:intron 55.0%
AGATGGTCTCTCGGACGATG+TGG + chr4_1:48558145-48558164 Msa0552110:exon 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG + chr4_1:48558623-48558642 Msa0552110:intron 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG + chr4_1:48558626-48558645 Msa0552110:intron 55.0%
! TTGCAGCTCTGGCTAGTGCT+TGG + chr4_1:48567659-48567678 Msa0552110:intron 55.0%
! TGAAGTCTGAGACACGCCCT+CGG - chr4_1:48567832-48567851 None:intergenic 55.0%
! TAGCTTGCCCTGCTTGCATC+AGG + chr4_1:48568853-48568872 Msa0552110:intron 55.0%
! GTTGCATTGATCCCTGGCTG+CGG + chr4_1:48569764-48569783 Msa0552110:intron 55.0%
CTGCGGCAACAAGGGATTTG+CGG + chr4_1:48569781-48569800 Msa0552110:intron 55.0%
GTGCATAGAAGCCGAAGTCG+AGG + chr4_1:48570265-48570284 Msa0552110:intron 55.0%
TCTCTCTCCCAGATCTGAGC+AGG - chr4_1:48570656-48570675 None:intergenic 55.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48553407-48553426 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+CGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAC+GGG + chr4_1:48553728-48553747 Msa0552110:five_prime_UTR 60.0%
TGGATCCAGGGACACGATGC+AGG + chr4_1:48553891-48553910 Msa0552110:five_prime_UTR 60.0%
GGATCCAGGGACACGATGCA+GGG + chr4_1:48553892-48553911 Msa0552110:five_prime_UTR 60.0%
GATCCAGGGACACGATGCAG+GGG + chr4_1:48553893-48553912 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48554058-48554077 Msa0552110:five_prime_UTR 60.0%
GTCAACGTGGCTCGCTTGGT+TGG - chr4_1:48558954-48558973 Msa0552130:CDS 60.0%
CTCGACCGTGGGTAATGTGC+AGG - chr4_1:48560245-48560264 Msa0552130:intron 60.0%
CTGCACATTACCCACGGTCG+AGG + chr4_1:48560243-48560262 Msa0552110:intron 60.0%
CCTGTTGGGGGCTTATGCTC+TGG - chr4_1:48560643-48560662 Msa0552130:intron 60.0%
CCAGAGCATAAGCCCCCAAC+AGG + chr4_1:48560640-48560659 Msa0552110:intron 60.0%
TCCAGGGCATAAGCCCCCAA+CGG + chr4_1:48560677-48560696 Msa0552110:intron 60.0%
TCTGTTGGGGGCTTATGCCC+TGG - chr4_1:48560720-48560739 Msa0552130:intron 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48553726-48553745 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48553407-48553426 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+CGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAC+GGG + chr4_1:48553728-48553747 Msa0552110:five_prime_UTR 60.0%
TGGATCCAGGGACACGATGC+AGG + chr4_1:48553891-48553910 Msa0552110:five_prime_UTR 60.0%
GGATCCAGGGACACGATGCA+GGG + chr4_1:48553892-48553911 Msa0552110:five_prime_UTR 60.0%
GATCCAGGGACACGATGCAG+GGG + chr4_1:48553893-48553912 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48554058-48554077 Msa0552110:five_prime_UTR 60.0%
GGCTGCTGCTGCATGAGCTT+GGG - chr4_1:48567747-48567766 None:intergenic 60.0%
TGGCTGCTGCTGCATGAGCT+TGG - chr4_1:48567748-48567767 None:intergenic 60.0%
TGTGTGGCCAAGAAGGCCAC+TGG - chr4_1:48567768-48567787 None:intergenic 60.0%
GGCGTGTCTCAGACTTCAGC+TGG + chr4_1:48567834-48567853 Msa0552110:intron 60.0%
GGCACACACCATGCAAGGTC+AGG - chr4_1:48569495-48569514 None:intergenic 60.0%
ATCCCTGGCTGCGGCAACAA+GGG + chr4_1:48569773-48569792 Msa0552110:intron 60.0%
ATCCCTTGTTGCCGCAGCCA+GGG - chr4_1:48569778-48569797 None:intergenic 60.0%
AATCCCTTGTTGCCGCAGCC+AGG - chr4_1:48569779-48569798 None:intergenic 60.0%
!! TGCCCCTAGGGCACTGGTTA+AGG + chr4_1:48571861-48571880 Msa0552110:intron 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr4_1:48571980-48571999 Msa0552110:intron 60.0%
TGTGTTAACCTGTGCCCCCG+GGG - chr4_1:48571997-48572016 None:intergenic 60.0%
GACCGCAGCTAGGGGAACTT+TGG - chr4_1:48572796-48572815 None:intergenic 60.0%
GTCAACGTGGCTCGCTTGGT+TGG - chr4_1:48558954-48558973 Msa0552130:CDS 60.0%
CTCGACCGTGGGTAATGTGC+AGG - chr4_1:48560245-48560264 Msa0552130:intron 60.0%
CTGCACATTACCCACGGTCG+AGG + chr4_1:48560243-48560262 Msa0552110:intron 60.0%
CCTGTTGGGGGCTTATGCTC+TGG - chr4_1:48560643-48560662 Msa0552130:intron 60.0%
CCAGAGCATAAGCCCCCAAC+AGG + chr4_1:48560640-48560659 Msa0552110:intron 60.0%
TCCAGGGCATAAGCCCCCAA+CGG + chr4_1:48560677-48560696 Msa0552110:intron 60.0%
TCTGTTGGGGGCTTATGCCC+TGG - chr4_1:48560720-48560739 Msa0552130:intron 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48553726-48553745 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48553407-48553426 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGACACGATGCA+CGG + chr4_1:48553406-48553425 Msa0552110:five_prime_UTR 60.0%
GATCGAGGGACACGATGCAC+GGG + chr4_1:48553728-48553747 Msa0552110:five_prime_UTR 60.0%
TGGATCCAGGGACACGATGC+AGG + chr4_1:48553891-48553910 Msa0552110:five_prime_UTR 60.0%
GGATCCAGGGACACGATGCA+GGG + chr4_1:48553892-48553911 Msa0552110:five_prime_UTR 60.0%
GATCCAGGGACACGATGCAG+GGG + chr4_1:48553893-48553912 Msa0552110:five_prime_UTR 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48554058-48554077 Msa0552110:five_prime_UTR 60.0%
GGCTGCTGCTGCATGAGCTT+GGG - chr4_1:48567747-48567766 None:intergenic 60.0%
TGGCTGCTGCTGCATGAGCT+TGG - chr4_1:48567748-48567767 None:intergenic 60.0%
TGTGTGGCCAAGAAGGCCAC+TGG - chr4_1:48567768-48567787 None:intergenic 60.0%
GGCGTGTCTCAGACTTCAGC+TGG + chr4_1:48567834-48567853 Msa0552110:intron 60.0%
GGCACACACCATGCAAGGTC+AGG - chr4_1:48569495-48569514 None:intergenic 60.0%
ATCCCTGGCTGCGGCAACAA+GGG + chr4_1:48569773-48569792 Msa0552110:intron 60.0%
ATCCCTTGTTGCCGCAGCCA+GGG - chr4_1:48569778-48569797 None:intergenic 60.0%
AATCCCTTGTTGCCGCAGCC+AGG - chr4_1:48569779-48569798 None:intergenic 60.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48553405-48553424 Msa0552110:five_prime_UTR 65.0%
ACACCCCTGCATCGTGTCCC+TGG - chr4_1:48553413-48553432 None:intergenic 65.0%
CCAGGGCATAAGCCCCCAAC+GGG + chr4_1:48560678-48560697 Msa0552110:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48553405-48553424 Msa0552110:five_prime_UTR 65.0%
ACACCCCTGCATCGTGTCCC+TGG - chr4_1:48553413-48553432 None:intergenic 65.0%
GCTCATGCAGCAGCAGCCAG+TGG + chr4_1:48567749-48567768 Msa0552110:intron 65.0%
GCAGCAGCCAGTGGCCTTCT+TGG + chr4_1:48567758-48567777 Msa0552110:intron 65.0%
! GGGGAGGCACACACCATGCA+AGG - chr4_1:48569500-48569519 None:intergenic 65.0%
GATCCCTGGCTGCGGCAACA+AGG + chr4_1:48569772-48569791 Msa0552110:intron 65.0%
AACCAGTGCCCCTAGGGCAC+TGG + chr4_1:48571855-48571874 Msa0552110:intron 65.0%
! AACCAGTGCCCTAGGGGCAC+TGG - chr4_1:48571860-48571879 None:intergenic 65.0%
CCAGGGCATAAGCCCCCAAC+GGG + chr4_1:48560678-48560697 Msa0552110:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48553405-48553424 Msa0552110:five_prime_UTR 65.0%
ACACCCCTGCATCGTGTCCC+TGG - chr4_1:48553413-48553432 None:intergenic 65.0%
GCTCATGCAGCAGCAGCCAG+TGG + chr4_1:48567749-48567768 Msa0552110:intron 65.0%
GCAGCAGCCAGTGGCCTTCT+TGG + chr4_1:48567758-48567777 Msa0552110:intron 65.0%
! GGGGAGGCACACACCATGCA+AGG - chr4_1:48569500-48569519 None:intergenic 65.0%
GATCCCTGGCTGCGGCAACA+AGG + chr4_1:48569772-48569791 Msa0552110:intron 65.0%
CCCGTTGGGGGCTTATGCCC+TGG - chr4_1:48560681-48560700 Msa0552130:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr4_1:48571985-48572004 None:intergenic 70.0%
CCCGTTGGGGGCTTATGCCC+TGG - chr4_1:48560681-48560700 Msa0552130:intron 70.0%
! AACCAGTGCCCCGGGGGCAC+AGG + chr4_1:48571986-48572005 Msa0552110:intron 75.0%
AACCTGTGCCCCCGGGGCAC+TGG - chr4_1:48571991-48572010 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 48553385 48584592 48553385 ID=Msa0552110;Name=Msa0552110
chr4_1 mRNA 48553385 48584592 48553385 ID=Msa0552110-mRNA-1;Parent=Msa0552110;Name=Msa0552110-mRNA-1;_AED=0.30;_eAED=0.30;_QI=637|0.93|0.97|0.97|0.12|0.05|34|3498|68
chr4_1 exon 48553385 48553462 48553385 ID=Msa0552110-mRNA-1:exon:13273;Parent=Msa0552110-mRNA-1
chr4_1 exon 48553535 48553550 48553535 ID=Msa0552110-mRNA-1:exon:13274;Parent=Msa0552110-mRNA-1
chr4_1 exon 48553723 48553765 48553723 ID=Msa0552110-mRNA-1:exon:13275;Parent=Msa0552110-mRNA-1
chr4_1 exon 48553888 48553930 48553888 ID=Msa0552110-mRNA-1:exon:13276;Parent=Msa0552110-mRNA-1
chr4_1 exon 48554054 48554097 48554054 ID=Msa0552110-mRNA-1:exon:13277;Parent=Msa0552110-mRNA-1
chr4_1 exon 48554222 48554264 48554222 ID=Msa0552110-mRNA-1:exon:13278;Parent=Msa0552110-mRNA-1
chr4_1 exon 48556467 48556686 48556467 ID=Msa0552110-mRNA-1:exon:13279;Parent=Msa0552110-mRNA-1
chr4_1 exon 48557742 48557860 48557742 ID=Msa0552110-mRNA-1:exon:13280;Parent=Msa0552110-mRNA-1
chr4_1 exon 48558116 48558190 48558116 ID=Msa0552110-mRNA-1:exon:13281;Parent=Msa0552110-mRNA-1
chr4_1 exon 48558280 48558394 48558280 ID=Msa0552110-mRNA-1:exon:13282;Parent=Msa0552110-mRNA-1
chr4_1 exon 48558507 48558640 48558507 ID=Msa0552110-mRNA-1:exon:13283;Parent=Msa0552110-mRNA-1
chr4_1 exon 48561688 48561756 48561688 ID=Msa0552110-mRNA-1:exon:13284;Parent=Msa0552110-mRNA-1
chr4_1 exon 48562028 48562070 48562028 ID=Msa0552110-mRNA-1:exon:13285;Parent=Msa0552110-mRNA-1
chr4_1 exon 48562824 48562850 48562824 ID=Msa0552110-mRNA-1:exon:13286;Parent=Msa0552110-mRNA-1
chr4_1 exon 48567680 48567715 48567680 ID=Msa0552110-mRNA-1:exon:13287;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576190 48576232 48576190 ID=Msa0552110-mRNA-1:exon:13288;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576351 48576393 48576351 ID=Msa0552110-mRNA-1:exon:13289;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576500 48576541 48576500 ID=Msa0552110-mRNA-1:exon:13290;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576664 48576706 48576664 ID=Msa0552110-mRNA-1:exon:13291;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576821 48576863 48576821 ID=Msa0552110-mRNA-1:exon:13292;Parent=Msa0552110-mRNA-1
chr4_1 exon 48576986 48577028 48576986 ID=Msa0552110-mRNA-1:exon:13293;Parent=Msa0552110-mRNA-1
chr4_1 exon 48577152 48577195 48577152 ID=Msa0552110-mRNA-1:exon:13294;Parent=Msa0552110-mRNA-1
chr4_1 exon 48577320 48578058 48577320 ID=Msa0552110-mRNA-1:exon:13295;Parent=Msa0552110-mRNA-1
chr4_1 exon 48578134 48578263 48578134 ID=Msa0552110-mRNA-1:exon:13296;Parent=Msa0552110-mRNA-1
chr4_1 exon 48578393 48578920 48578393 ID=Msa0552110-mRNA-1:exon:13297;Parent=Msa0552110-mRNA-1
chr4_1 exon 48580540 48580658 48580540 ID=Msa0552110-mRNA-1:exon:13298;Parent=Msa0552110-mRNA-1
chr4_1 exon 48580914 48580988 48580914 ID=Msa0552110-mRNA-1:exon:13299;Parent=Msa0552110-mRNA-1
chr4_1 exon 48581305 48581438 48581305 ID=Msa0552110-mRNA-1:exon:13300;Parent=Msa0552110-mRNA-1
chr4_1 exon 48581527 48581748 48581527 ID=Msa0552110-mRNA-1:exon:13301;Parent=Msa0552110-mRNA-1
chr4_1 exon 48581876 48581990 48581876 ID=Msa0552110-mRNA-1:exon:13302;Parent=Msa0552110-mRNA-1
chr4_1 exon 48582609 48582734 48582609 ID=Msa0552110-mRNA-1:exon:13303;Parent=Msa0552110-mRNA-1
chr4_1 exon 48583614 48584193 48583614 ID=Msa0552110-mRNA-1:exon:13304;Parent=Msa0552110-mRNA-1
chr4_1 exon 48584330 48584408 48584330 ID=Msa0552110-mRNA-1:exon:13305;Parent=Msa0552110-mRNA-1
chr4_1 exon 48584504 48584592 48584504 ID=Msa0552110-mRNA-1:exon:13306;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48553385 48553462 48553385 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48553535 48553550 48553535 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48553723 48553765 48553723 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48553888 48553930 48553888 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48554054 48554097 48554054 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48554222 48554264 48554222 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48556467 48556686 48556467 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48557742 48557860 48557742 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 five_prime_UTR 48558116 48558146 48558116 ID=Msa0552110-mRNA-1:five_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 CDS 48558147 48558190 48558147 ID=Msa0552110-mRNA-1:cds;Parent=Msa0552110-mRNA-1
chr4_1 CDS 48558280 48558394 48558280 ID=Msa0552110-mRNA-1:cds;Parent=Msa0552110-mRNA-1
chr4_1 CDS 48558507 48558554 48558507 ID=Msa0552110-mRNA-1:cds;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48558555 48558640 48558555 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48561688 48561756 48561688 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48562028 48562070 48562028 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48562824 48562850 48562824 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48567680 48567715 48567680 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576190 48576232 48576190 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576351 48576393 48576351 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576500 48576541 48576500 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576664 48576706 48576664 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576821 48576863 48576821 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48576986 48577028 48576986 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48577152 48577195 48577152 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48577320 48578058 48577320 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48578134 48578263 48578134 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48578393 48578920 48578393 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48580540 48580658 48580540 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48580914 48580988 48580914 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48581305 48581438 48581305 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48581527 48581748 48581527 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48581876 48581990 48581876 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48582609 48582734 48582609 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48583614 48584193 48583614 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48584330 48584408 48584330 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
chr4_1 three_prime_UTR 48584504 48584592 48584504 ID=Msa0552110-mRNA-1:three_prime_utr;Parent=Msa0552110-mRNA-1
Gene Sequence

>Msa0552110

ATGGTCTCTCGGACGATGTGGCAGCTCCAATTAGTGGCTCTCAGTAATCCTGCTATCATTTTGTTCCGAGGGAAGACTACTTACTTTACACTGGCTTTCTTGGCCCGTGAAGATTTAGTTTTTGTTGTTTTTCTTATATCAGCTAATCTTATTAAAAAGGATGGCACTGCTTGTGTTTGGAGACTTCCAGATATGGGCTATATCTGA

Protein sequence

>Msa0552110

MVSRTMWQLQLVALSNPAIILFRGKTTYFTLAFLAREDLVFVVFLISANLIKKDGTACVWRLPDMGYI*