AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0552340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 199 sgRNAs with CRISPR-Local

Find 830 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTCATATTATAAAATA+TGG 0.209225 4_1:-48935785 None:intergenic
GCAGCAGCCAGTGGCCTTCT+TGG 0.225465 4_1:+48933603 Msa0552340:three_prime_UTR
GGCTGCTGCTGCATGAGCTT+GGG 0.225768 4_1:-48933589 None:intergenic
CTATGCACTAGTCCCGTTTC+TGG 0.229114 4_1:-48936046 None:intergenic
TGGCTGCTGCTGCATGAGCT+TGG 0.233454 4_1:-48933590 None:intergenic
GTCCACAAATACAAGGTTTC+TGG 0.243519 4_1:+48933941 Msa0552340:three_prime_UTR
ATTAAAACTTTCCACAAGTT+TGG 0.270086 4_1:-48935703 None:intergenic
ACCTGAAGCTTTGTGGTATT+GGG 0.289083 4_1:+48931363 Msa0552340:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+48925866 Msa0552340:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+48926534 Msa0552340:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+48927668 Msa0552340:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+48928006 Msa0552340:CDS
CCGTTCCGCTTTATCATCAC+TGG 0.294393 4_1:-48936291 None:intergenic
TATGGTTGTAGATTATGTTT+TGG 0.299380 4_1:+48935762 Msa0552340:three_prime_UTR
CACCTGAAGCTTTGTGGTAT+TGG 0.307162 4_1:+48931362 Msa0552340:CDS
TAGCTTGCCCTCCTTGCTTC+AGG 0.316481 4_1:+48934649 Msa0552340:three_prime_UTR
GCGGGGATGTTGTTTGTATC+AGG 0.333623 4_1:+48926200 Msa0552340:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.335179 4_1:+48923845 Msa0552340:CDS
GTAGGGGTGTTGTTTGTATC+AGG 0.344140 4_1:+48928681 Msa0552340:CDS
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+48925699 Msa0552340:CDS
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+48926033 Msa0552340:CDS
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+48926367 Msa0552340:CDS
AAATACCTTCAATGCAATTT+CGG 0.353076 4_1:+48935915 Msa0552340:three_prime_UTR
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+48927500 Msa0552340:CDS
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+48927838 Msa0552340:CDS
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+48928516 Msa0552340:CDS
GGAACAAATTATAAGGCTTC+CGG 0.358326 4_1:-48935995 None:intergenic
ATGTTAAGGAACAAATTATA+AGG 0.359162 4_1:-48936002 None:intergenic
TCCCAATACCACAAAGCTTC+AGG 0.364461 4_1:-48931364 None:intergenic
GGATCGAGGGGACACATTGC+GGG 0.364921 4_1:+48926182 Msa0552340:CDS
TTATGAAACTTTAAGAGCTC+TGG 0.370204 4_1:+48933859 Msa0552340:three_prime_UTR
GGAACGAGGGGACGCATTGC+AGG 0.377245 4_1:+48927650 Msa0552340:CDS
ATGTAGCCTCGAAGCTTTGT+AGG 0.380636 4_1:+48935958 Msa0552340:three_prime_UTR
TGTTTGGAGACTTCCAGATA+TGG 0.383401 4_1:+48933302 Msa0552340:three_prime_UTR
ATCTCTTCCTCGGACATAGA+AGG 0.384845 4_1:-48933905 None:intergenic
GCAGGGATGTTGTTTGTCTC+AGG 0.388069 4_1:+48929305 Msa0552340:CDS
TGTCTTTCAAACCCAGGTCT+AGG 0.389680 4_1:+48923468 Msa0552340:five_prime_UTR
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+48925848 Msa0552340:CDS
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+48926516 Msa0552340:CDS
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+48929287 Msa0552340:CDS
GGATCGAGGGGACACATTGC+AGG 0.399391 4_1:+48927988 Msa0552340:CDS
CGATCTGGTTCTTCAAAAGA+AGG 0.400490 4_1:-48923530 None:intergenic
TAGCCACGTTTACAATGTTA+AGG 0.401215 4_1:-48936016 None:intergenic
TAAAAGTTTAAAATTGAAAC+AGG 0.402809 4_1:-48935741 None:intergenic
CTGCGGCAACAAGGGATTTG+CGG 0.412826 4_1:+48935577 Msa0552340:three_prime_UTR
ACGGGAGTCTTTAAGTCATA+AGG 0.413942 4_1:+48936156 Msa0552340:three_prime_UTR
AGGATTGCACTGCTTGTGTT+TGG 0.414613 4_1:+48933286 Msa0552340:intron
TGCTTGGCTGACATCATCAT+GGG 0.416444 4_1:-48931445 None:intergenic
AATCCCTTGTTGCCGCAGCC+AGG 0.416854 4_1:-48935572 None:intergenic
GCAGGGGTGTTGTATGTTAC+AGG 0.417903 4_1:+48924333 Msa0552340:CDS
CATCAGATATAGCCCATATC+TGG 0.418485 4_1:-48933315 None:intergenic
GTGCGAAATTGCAGACAGAT+TGG 0.419355 4_1:-48923499 None:intergenic
TGCTGTACAGGTTAGGTTGT+TGG 0.423397 4_1:+48932594 Msa0552340:intron
TGGATCGTGGGACACGATGC+AGG 0.424618 4_1:+48926683 Msa0552340:CDS
TTGAATGTTTATTTAAGGTA+TGG 0.430611 4_1:-48936339 None:intergenic
TCAGAAGGTAGAAGTTGTAT+TGG 0.431779 4_1:+48932619 Msa0552340:three_prime_UTR
AACTGCCGAAATTGCATTGA+AGG 0.433351 4_1:-48935920 None:intergenic
AACGGTCACCTGAAGCTTTG+TGG 0.436580 4_1:+48931356 Msa0552340:CDS
AAGCGCGACATCTTTGTTAG+TGG 0.437300 4_1:+48932694 Msa0552340:three_prime_UTR
AATAAAGAAGATTACCGATC+TGG 0.441308 4_1:-48923545 None:intergenic
GCAGGGGTGTTGTATGAATC+AGG 0.443379 4_1:+48926701 Msa0552340:CDS
AACTTTAAGAGCTCTGGATT+CGG 0.443410 4_1:+48933865 Msa0552340:three_prime_UTR
TTCAGCTGGCACTTCTTGAT+CGG 0.445031 4_1:+48933691 Msa0552340:three_prime_UTR
GTAGGTGAAACAGAGATTGC+CGG 0.446732 4_1:+48935976 Msa0552340:three_prime_UTR
CCATGTTATGTTGTGCCGTT+AGG 0.448547 4_1:-48931524 None:intergenic
TGCGAAATTGCAGACAGATT+GGG 0.452742 4_1:-48923498 None:intergenic
AGGTACCCTTGTACCTTGCT+TGG 0.453384 4_1:-48931461 None:intergenic
TAAAGACTCCCGTGAATGTC+GGG 0.455030 4_1:-48936146 None:intergenic
TGGATCAAGGGACATGATGC+AGG 0.456519 4_1:+48924315 Msa0552340:CDS
GGCTAATTCTATCCAGAAAC+GGG 0.458178 4_1:+48936034 Msa0552340:three_prime_UTR
CGGCTTGCAAGTGCTATTGA+TGG 0.461962 4_1:-48933654 None:intergenic
TCAGCTGGCACTTCTTGATC+GGG 0.463787 4_1:+48933692 Msa0552340:three_prime_UTR
CGTTCCGCTTTATCATCACT+GGG 0.465347 4_1:-48936290 None:intergenic
GACCAGAAACCTTGTATTTG+TGG 0.466017 4_1:-48933943 None:intergenic
TGGATCGAGGGACACGATGC+AGG 0.467043 4_1:+48923827 Msa0552340:exon
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+48925681 Msa0552340:CDS
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+48926015 Msa0552340:CDS
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+48926349 Msa0552340:CDS
GTTTGGAGACTTCCAGATAT+GGG 0.469760 4_1:+48933303 Msa0552340:three_prime_UTR
AAGATCGAGGGACACGATGC+AGG 0.469936 4_1:+48927482 Msa0552340:CDS
AAGATCGAGGGACACGATGC+AGG 0.469936 4_1:+48927820 Msa0552340:CDS
TAGATCGAGGGACACGATGC+AGG 0.474673 4_1:+48928498 Msa0552340:intron
TTGCTTGGCTGACATCATCA+TGG 0.474830 4_1:-48931446 None:intergenic
GCTCACTTGCAGTGTATGAT+TGG 0.478221 4_1:+48934598 Msa0552340:three_prime_UTR
AGAAAATAATAATCTATCGT+TGG 0.482734 4_1:+48923337 Msa0552340:five_prime_UTR
AGTTGTATTGGAGTCGGTAT+AGG 0.482906 4_1:+48932631 Msa0552340:three_prime_UTR
GATCGGGAGTTTGATGATCT+AGG 0.485183 4_1:+48933708 Msa0552340:three_prime_UTR
TTCATTCTGTGATACGCACT+TGG 0.486224 4_1:-48935826 None:intergenic
TTGCAGCTCTGGCTAGTGCT+TGG 0.489119 4_1:+48933504 Msa0552340:intron
TCGTGTTTGAAGACACTTGA+AGG 0.493320 4_1:+48933347 Msa0552340:three_prime_UTR
AGGCTAGTTGCATTGATCCC+TGG 0.497142 4_1:+48935554 Msa0552340:three_prime_UTR
AGGGCGTCTCAGACTTCAGC+TGG 0.499276 4_1:+48933677 Msa0552340:three_prime_UTR
ACATCTTTGTTAGTGGCAGC+AGG 0.500908 4_1:+48932701 Msa0552340:three_prime_UTR
TGTGCCGTTAGGCAGATTGA+TGG 0.507564 4_1:-48931513 None:intergenic
TGGCTAATTCTATCCAGAAA+CGG 0.509071 4_1:+48936033 Msa0552340:three_prime_UTR
ATCCCTTGTTGCCGCAGCCA+GGG 0.509449 4_1:-48935571 None:intergenic
TGATTGGAGCAAGTTTATGT+TGG 0.509867 4_1:+48934614 Msa0552340:three_prime_UTR
TCTTGATGGCTACAATGCTA+AGG 0.511885 4_1:+48933532 Msa0552340:three_prime_UTR
GCGTGCAAGTACAGCCACTT+AGG 0.514350 4_1:-48923406 None:intergenic
TTTCAAACCCAGGTCTAGGT+TGG 0.518913 4_1:+48923472 Msa0552340:five_prime_UTR
TGGCATTGAATGCTATCAAA+AGG 0.520255 4_1:-48936319 None:intergenic
GAAACCTTGTATTTGTGGAC+AGG 0.524408 4_1:-48933938 None:intergenic
CGAGGCTACATACAATCCTC+AGG 0.524500 4_1:-48935946 None:intergenic
CAGGATAATTCAAATGCGGT+TGG 0.526813 4_1:+48934551 Msa0552340:three_prime_UTR
AAGAGCATTTATCTCTTCCT+CGG 0.528824 4_1:-48933915 None:intergenic
TTGGGTTTCCAACCTAGACC+TGG 0.529232 4_1:-48923480 None:intergenic
GCTCATGCAGCAGCAGCCAG+TGG 0.529345 4_1:+48933594 Msa0552340:three_prime_UTR
GTTTCACCTACAAAGCTTCG+AGG 0.531446 4_1:-48935964 None:intergenic
TGTGTGGCCAAGAAGGCCAC+TGG 0.533669 4_1:-48933610 None:intergenic
CGTGAATGTCGGGTTTGTTG+TGG 0.535944 4_1:-48936136 None:intergenic
TGTCAGCCAAGCAAGGTACA+AGG 0.535950 4_1:+48931455 Msa0552340:CDS
GTGTCTTCAAACACGACTCA+CGG 0.536372 4_1:-48933340 None:intergenic
CATTTATTAATCCAAACTTG+TGG 0.537070 4_1:+48935692 Msa0552340:three_prime_UTR
GTTGTTTGTCTTTCAAACCC+AGG 0.537316 4_1:+48923462 Msa0552340:five_prime_UTR
GGATCGTGGGACACGATGCA+GGG 0.539319 4_1:+48926684 Msa0552340:CDS
ATAGGTCACATGTGAGCTGT+TGG 0.539352 4_1:+48932649 Msa0552340:three_prime_UTR
ATCCCTGGCTGCGGCAACAA+GGG 0.539645 4_1:+48935569 Msa0552340:three_prime_UTR
ACAACAAACCCGACATTCAC+GGG 0.539924 4_1:+48936138 Msa0552340:three_prime_UTR
TCGTTTGTGGCAGAAGACAC+AGG 0.541361 4_1:+48934532 Msa0552340:intron
CACAACAAACCCGACATTCA+CGG 0.543492 4_1:+48936137 Msa0552340:three_prime_UTR
GATCCCTGGCTGCGGCAACA+AGG 0.547198 4_1:+48935568 Msa0552340:three_prime_UTR
TCTTCCTGTCCACAAATACA+AGG 0.550485 4_1:+48933934 Msa0552340:three_prime_UTR
CAGATATGGGCTATATCTGA+TGG 0.553081 4_1:+48933316 Msa0552340:three_prime_UTR
TGTTACCCGTGCGTTTCTTG+TGG 0.553708 4_1:+48933400 Msa0552340:three_prime_UTR
GATCGAGGGGACACATTGCG+GGG 0.556518 4_1:+48926183 Msa0552340:CDS
TGCCTCTTCGAATTCTTGAA+CGG 0.557552 4_1:+48931338 Msa0552340:CDS
TGGATCGAGGGGACACATTG+CGG 0.559674 4_1:+48926181 Msa0552340:CDS
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+48925849 Msa0552340:CDS
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+48926517 Msa0552340:CDS
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+48929288 Msa0552340:CDS
TTCTTGGCCACACAGAACTA+CGG 0.560332 4_1:+48933619 Msa0552340:three_prime_UTR
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+48925517 Msa0552340:CDS
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+48928664 Msa0552340:CDS
TTTCACAAGAGCCTCGACTT+CGG 0.561783 4_1:-48936072 None:intergenic
GGTAGAAGTTGTATTGGAGT+CGG 0.564071 4_1:+48932625 Msa0552340:three_prime_UTR
GATCGAGGGGACACATTGCA+GGG 0.564670 4_1:+48927989 Msa0552340:CDS
AGATCGAGGGACACGATGCA+GGG 0.567214 4_1:+48927483 Msa0552340:CDS
AGATCGAGGGACACGATGCA+GGG 0.567214 4_1:+48927821 Msa0552340:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+48925682 Msa0552340:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+48926016 Msa0552340:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+48926350 Msa0552340:CDS
CAAAAGAACTTGCAATTAAG+CGG 0.569807 4_1:-48936265 None:intergenic
AAACAGACCTGAAGCAAGGA+GGG 0.572290 4_1:-48934656 None:intergenic
CCTAACGGCACAACATAACA+TGG 0.576607 4_1:+48931524 Msa0552340:three_prime_UTR
GTTAGGTTGTTGGAATCAGA+AGG 0.577503 4_1:+48932604 Msa0552340:three_prime_UTR
AGATCGAGGGACACGATGCA+GGG 0.578378 4_1:+48928499 Msa0552340:intron
CAATAGCACTTGCAAGCCGA+GGG 0.579957 4_1:+48933658 Msa0552340:three_prime_UTR
ACTTGCGAGTCTGAATTCAC+AGG 0.580218 4_1:+48931420 Msa0552340:CDS
GCCTCCATCAATCTGCCTAA+CGG 0.580649 4_1:+48931509 Msa0552340:three_prime_UTR
TGTCTTCAAACACGACTCAC+GGG 0.581712 4_1:-48933339 None:intergenic
TCAATAGCACTTGCAAGCCG+AGG 0.581721 4_1:+48933657 Msa0552340:three_prime_UTR
TGGGTTTCCAACCTAGACCT+GGG 0.581878 4_1:-48923479 None:intergenic
TTAAAGACTCCCGTGAATGT+CGG 0.582049 4_1:-48936147 None:intergenic
AGAAACGCACGGGTAACAAA+CGG 0.583364 4_1:-48933395 None:intergenic
GCTGAAGTCTGAGACGCCCT+CGG 0.586735 4_1:-48933674 None:intergenic
GAACGAGGGGACGCATTGCA+GGG 0.588553 4_1:+48927651 Msa0552340:CDS
TACTGCACCTTCTATGTCCG+AGG 0.589699 4_1:+48933898 Msa0552340:three_prime_UTR
CGCAACACAACATAACTAAG+TGG 0.592443 4_1:+48923428 Msa0552340:five_prime_UTR
CGTGTTTGAAGACACTTGAA+GGG 0.593182 4_1:+48933348 Msa0552340:three_prime_UTR
GGATCAAGGGACATGATGCA+GGG 0.595399 4_1:+48924316 Msa0552340:CDS
GTTGCATTGATCCCTGGCTG+CGG 0.599433 4_1:+48935560 Msa0552340:three_prime_UTR
AATTCTGTAGTTCAAGATCG+AGG 0.601426 4_1:+48927469 Msa0552340:intron
GGATCGAGGGACACGATGCA+GGG 0.601952 4_1:+48923828 Msa0552340:exon
ATTCTGTAGTTCAAGATCGA+GGG 0.603502 4_1:+48927470 Msa0552340:intron
TGAACCCAGTGATGATAAAG+CGG 0.607976 4_1:+48936286 Msa0552340:three_prime_UTR
CTTGCAAGTGCTATTGATGG+AGG 0.610782 4_1:-48933651 None:intergenic
GCCGTTAGGCAGATTGATGG+AGG 0.611185 4_1:-48931510 None:intergenic
CTTGCGAGTCTGAATTCACA+GGG 0.614185 4_1:+48931421 Msa0552340:CDS
AAATACATAATTGAGCGCAA+TGG 0.614605 4_1:-48936099 None:intergenic
GCAAGTGAGCTCATCATCAG+AGG 0.615069 4_1:-48934585 None:intergenic
GCTTGGCTGACATCATCATG+GGG 0.617695 4_1:-48931444 None:intergenic
TCCTACCACAAGAAACGCAC+GGG 0.620429 4_1:-48933405 None:intergenic
GATCGTGGGACACGATGCAG+GGG 0.622017 4_1:+48926685 Msa0552340:CDS
GTAGTTCTGTGTGGCCAAGA+AGG 0.622680 4_1:-48933617 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+48925683 Msa0552340:CDS
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+48926017 Msa0552340:CDS
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+48926351 Msa0552340:CDS
GTGCATAGAAGCCGAAGTCG+AGG 0.634827 4_1:+48936061 Msa0552340:three_prime_UTR
GTCAGCCAAGCAAGGTACAA+GGG 0.642769 4_1:+48931456 Msa0552340:CDS
ATGATGATGTCAGCCAAGCA+AGG 0.643183 4_1:+48931448 Msa0552340:CDS
AATGAAACAGACCTGAAGCA+AGG 0.644664 4_1:-48934660 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.645320 4_1:+48927484 Msa0552340:CDS
GATCGAGGGACACGATGCAG+GGG 0.645320 4_1:+48927822 Msa0552340:CDS
CTCCTACCACAAGAAACGCA+CGG 0.646206 4_1:-48933406 None:intergenic
GTGAATTCAGACTCGCAAGT+GGG 0.653816 4_1:-48931417 None:intergenic
GTTCCTTAACATTGTAAACG+TGG 0.656496 4_1:+48936013 Msa0552340:three_prime_UTR
TGTGAATTCAGACTCGCAAG+TGG 0.664881 4_1:-48931418 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.665111 4_1:+48928500 Msa0552340:intron
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+48925516 Msa0552340:CDS
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+48928663 Msa0552340:CDS
GACACAGGATAATTCAAATG+CGG 0.672978 4_1:+48934547 Msa0552340:three_prime_UTR
GATCAAGGGACATGATGCAG+GGG 0.677215 4_1:+48924317 Msa0552340:CDS
GAAACAGACCTGAAGCAAGG+AGG 0.677621 4_1:-48934657 None:intergenic
AATTTCGGCAGTTACACCTG+AGG 0.678139 4_1:+48935930 Msa0552340:three_prime_UTR
CCAGTGATGATAAAGCGGAA+CGG 0.692513 4_1:+48936291 Msa0552340:three_prime_UTR
GACCGTTCAAGAATTCGAAG+AGG 0.699725 4_1:-48931340 None:intergenic
TATGCAACCGTAGTTCTGTG+TGG 0.732630 4_1:-48933626 None:intergenic
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+48925518 Msa0552340:CDS
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+48928665 Msa0552340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAATTTAATTTTGTAC+AGG - chr4_1:48923789-48923808 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!! ACAAAATTATAACATTTATT+CGG + chr4_1:48924595-48924614 Msa0552340:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!! ACAAAATTATAACATTTATT+CGG + chr4_1:48924595-48924614 Msa0552340:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!! ACAAAATTATAACATTTATT+CGG + chr4_1:48924595-48924614 Msa0552340:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:48924114-48924133 Msa0552340:intron 10.0%
!!! TAAATAATATAATTTTGTAC+AGG - chr4_1:48927273-48927292 None:intergenic 10.0%
!! GAAAAAGAAAAAAAAAAAAT+TGG - chr4_1:48927571-48927590 None:intergenic 10.0%
!! GAAATATAAAATTGATAAAA+TGG + chr4_1:48929665-48929684 Msa0552340:intron 10.0%
!! TGTTTGTTTAATATATAATT+TGG - chr4_1:48932242-48932261 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+TGG + chr4_1:48932488-48932507 Msa0552340:intron 10.0%
!!! TTATTTTGAATGTTTATTTA+AGG - chr4_1:48936347-48936366 None:intergenic 10.0%
!!! AAGAAATATATTTTTTGTTG+AGG + chr4_1:48923287-48923306 Msa0552340:five_prime_UTR 15.0%
!!! TAAATTTTATAATTTTGTCC+AGG - chr4_1:48923947-48923966 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!! ATAAAAAAAGATTGAAACAT+AGG - chr4_1:48924199-48924218 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48924206-48924225 Msa0552340:intron 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48924593-48924612 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48924593-48924612 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48924593-48924612 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!! ATAAAAATAGATTGAAACAT+AGG - chr4_1:48925565-48925584 None:intergenic 15.0%
!!! AATCTATTTTTATTGTTTGA+TGG + chr4_1:48925572-48925591 Msa0552340:intron 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48924206-48924225 Msa0552340:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48925809-48925828 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48924206-48924225 Msa0552340:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48925809-48925828 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48926273-48926292 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48924206-48924225 Msa0552340:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48925809-48925828 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48926273-48926292 None:intergenic 15.0%
!! ATAAAAAAAGATTGAAACAT+AGG - chr4_1:48924199-48924218 None:intergenic 15.0%
!!! AATCTTTTTTTATAGTTTGA+TGG + chr4_1:48927202-48927221 Msa0552340:intron 15.0%
!!! ATGAAAAAGCAAAAAAATTT+TGG - chr4_1:48927406-48927425 None:intergenic 15.0%
!! ATGAAAAAGCAAAAAAAATT+TGG - chr4_1:48927744-48927763 None:intergenic 15.0%
!! GAAAAAGAAAGAAAAAAAAT+TGG - chr4_1:48927909-48927928 None:intergenic 15.0%
!! ATGAAGAACAAAAAAAAAAT+TGG - chr4_1:48928246-48928265 None:intergenic 15.0%
!! ATGAAAAAGCAAAAAAAAAT+TGG - chr4_1:48928422-48928441 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:48924112-48924131 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48924593-48924612 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:48924593-48924612 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:48924206-48924225 Msa0552340:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:48925809-48925828 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:48926273-48926292 None:intergenic 15.0%
!! AAAATACCATATTATCAAAA+TGG + chr4_1:48929886-48929905 Msa0552340:intron 15.0%
!! ATATATCAAGAACTTAATTT+CGG + chr4_1:48930039-48930058 Msa0552340:intron 15.0%
!!! GTTTTATAATTTCATTTTCT+AGG + chr4_1:48930573-48930592 Msa0552340:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG - chr4_1:48931699-48931718 None:intergenic 15.0%
!! TTTATCAAAACAAAATGAAA+AGG + chr4_1:48932202-48932221 Msa0552340:intron 15.0%
!! AATATTATTATCAACGTATA+AGG - chr4_1:48932517-48932536 None:intergenic 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:48933015-48933034 Msa0552340:intron 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:48933015-48933034 Msa0552340:intron 15.0%
!! AAAAGAACAAAATTAGATAT+AGG - chr4_1:48933436-48933455 None:intergenic 15.0%
!! AAATTGAAAATTCATATTTG+AGG + chr4_1:48934114-48934133 Msa0552340:intron 15.0%
!! AATTGAAAATTCATATTTGA+GGG + chr4_1:48934115-48934134 Msa0552340:intron 15.0%
!!! AATATTTTGGATAATTAACT+CGG + chr4_1:48934339-48934358 Msa0552340:intron 15.0%
!!! AACTACAGATAAAATTTTAT+AGG - chr4_1:48935046-48935065 None:intergenic 15.0%
!!! TAAAAGTTTAAAATTGAAAC+AGG - chr4_1:48935744-48935763 None:intergenic 15.0%
!!! GTTTCAATTTTAAACTTTTA+TGG + chr4_1:48935744-48935763 Msa0552340:three_prime_UTR 15.0%
!!! ATTATGTATTTTTTATTCTC+TGG + chr4_1:48936111-48936130 Msa0552340:three_prime_UTR 15.0%
!!! TCACTTTTTAATTTATTTTC+AGG - chr4_1:48936185-48936204 None:intergenic 15.0%
!! AGAAAATAATAATCTATCGT+TGG + chr4_1:48923337-48923356 Msa0552340:five_prime_UTR 20.0%
!!! TATTTTAGTTGACTAATAAG+TGG + chr4_1:48923364-48923383 Msa0552340:five_prime_UTR 20.0%
!!! CTTTGTTTTTTATTGTTTGA+TGG + chr4_1:48923879-48923898 Msa0552340:intron 20.0%
!!! GTGAAAAAGCAAAAAATTTT+TGG - chr4_1:48924405-48924424 None:intergenic 20.0%
!! ATAAAAAAAGATTGAAACAC+AGG - chr4_1:48925730-48925749 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:48925822-48925841 Msa0552340:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48925897-48925916 None:intergenic 20.0%
!!! ACGAAAAAGCAAATTTTTTT+TGG - chr4_1:48925939-48925958 None:intergenic 20.0%
!! ATAAAAAAAGATTGAAACAC+AGG - chr4_1:48925730-48925749 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:48925822-48925841 Msa0552340:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48925897-48925916 None:intergenic 20.0%
!! ATAAAAAAAGATTGAAACAC+AGG - chr4_1:48925730-48925749 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:48925822-48925841 Msa0552340:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48925897-48925916 None:intergenic 20.0%
!!! TAAATGTTATAATTTTCTCC+AGG - chr4_1:48926810-48926829 None:intergenic 20.0%
!!! TAAATGTTATAATTTTCTCC+AGG - chr4_1:48926810-48926829 None:intergenic 20.0%
!!! TAAATGTTATAATTTTCTCC+AGG - chr4_1:48926810-48926829 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:48927361-48927380 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:48927361-48927380 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:48927361-48927380 None:intergenic 20.0%
!! GATGAAAATGCAAAAAAATT+TGG - chr4_1:48928082-48928101 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:48927361-48927380 None:intergenic 20.0%
!! AATAAAAAAAGATTGAAACG+TGG - chr4_1:48928547-48928566 None:intergenic 20.0%
!! ATGAAGAAGGAAAAAAAATT+TGG - chr4_1:48928587-48928606 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:48925822-48925841 Msa0552340:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:48925897-48925916 None:intergenic 20.0%
!!! ATGAACAAGCAAATTTTTTT+TGG - chr4_1:48929547-48929566 None:intergenic 20.0%
!!! CAAATTTTATAATTTTGGAC+AGG - chr4_1:48929585-48929604 None:intergenic 20.0%
!!! GTTGGCAAATTTTATAATTT+TGG - chr4_1:48929590-48929609 None:intergenic 20.0%
!!! TAAGAACCATTTTGATAATA+TGG - chr4_1:48929895-48929914 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG - chr4_1:48930077-48930096 None:intergenic 20.0%
!! ACAACAAAATACTTTATTAG+AGG + chr4_1:48930258-48930277 Msa0552340:intron 20.0%
!! ACTGTTGTATATGAAATAAA+AGG - chr4_1:48930351-48930370 None:intergenic 20.0%
!! ATTATAAAACTAGTTACAGT+AGG - chr4_1:48930563-48930582 None:intergenic 20.0%
!! ATCTACAATTTAAATAAGAG+AGG + chr4_1:48930773-48930792 Msa0552340:intron 20.0%
!! TCTACAATTTAAATAAGAGA+GGG + chr4_1:48930774-48930793 Msa0552340:intron 20.0%
!! ATGCAATACATGAAAAAAAT+AGG - chr4_1:48931015-48931034 None:intergenic 20.0%
!! TATATAATGAGTACAAAAAG+TGG - chr4_1:48931581-48931600 None:intergenic 20.0%
!! TATAAAGTTAACTGTTGATA+TGG + chr4_1:48931597-48931616 Msa0552340:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG + chr4_1:48931660-48931679 Msa0552340:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG - chr4_1:48931666-48931685 None:intergenic 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG + chr4_1:48932271-48932290 Msa0552340:intron 20.0%
!! CAACTAGAATTTATTTATCA+TGG + chr4_1:48932758-48932777 Msa0552340:intron 20.0%
!! AAGCAATTACTGTAAATTTA+TGG + chr4_1:48932843-48932862 Msa0552340:intron 20.0%
!!! TTTTTTCAATCTATTCTCAA+GGG + chr4_1:48932876-48932895 Msa0552340:intron 20.0%
!! AAACTAAATCTTCAAACAAT+AGG - chr4_1:48933226-48933245 None:intergenic 20.0%
!! GAAAAAAAAAAAACTGAGTA+AGG - chr4_1:48933823-48933842 None:intergenic 20.0%
!! AATGTCAAAATCCATTTAAA+GGG - chr4_1:48934009-48934028 None:intergenic 20.0%
!!! AAGCTGTAATTTCAATATTT+TGG + chr4_1:48934326-48934345 Msa0552340:intron 20.0%
!!! ATTTTATCTGTAGTTGAAAT+TGG + chr4_1:48935051-48935070 Msa0552340:intron 20.0%
!!! TAAAATGCTTTTCAAAACAA+GGG - chr4_1:48935097-48935116 None:intergenic 20.0%
!!! TTTTGAAAAGCATTTTACTT+TGG + chr4_1:48935100-48935119 Msa0552340:intron 20.0%
!!! AATATCTACACAACTTTTTT+GGG - chr4_1:48935338-48935357 None:intergenic 20.0%
!!! AAATATCTACACAACTTTTT+TGG - chr4_1:48935339-48935358 None:intergenic 20.0%
!! ATGTTAAGGAACAAATTATA+AGG - chr4_1:48936005-48936024 None:intergenic 20.0%
!!! TTTTTGACAAGTTATTTGAA+TGG + chr4_1:48936235-48936254 Msa0552340:three_prime_UTR 20.0%
!!! TTGAATGTTTATTTAAGGTA+TGG - chr4_1:48936342-48936361 None:intergenic 20.0%
!!! CTTTTTTTGTTTTGTCACAA+AGG - chr4_1:48923577-48923596 None:intergenic 25.0%
! CTACAAAATTCGGAATAAAA+GGG - chr4_1:48923760-48923779 None:intergenic 25.0%
! ACTACAAAATTCGGAATAAA+AGG - chr4_1:48923761-48923780 None:intergenic 25.0%
!! GGTGAAAAAGCAAATTTTAT+TGG - chr4_1:48924240-48924259 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
! AATTCGGAATAAATGTTAAC+AGG - chr4_1:48925487-48925506 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48925771-48925790 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48925771-48925790 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48925771-48925790 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:48926663-48926682 Msa0552340:intron 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:48924555-48924574 None:intergenic 25.0%
! GTACAAGTAAAAAATGAATG+AGG - chr4_1:48927595-48927614 None:intergenic 25.0%
!! TATTCCGAATTTTGTAGTTA+TGG + chr4_1:48927967-48927986 Msa0552340:intron 25.0%
! AATAAAGAAAGATTGAAACG+TGG - chr4_1:48927531-48927550 None:intergenic 25.0%
!! TATTCCGAATTTTGTAGTTA+TGG + chr4_1:48927967-48927986 Msa0552340:intron 25.0%
! AAAAATGAATGAGATGAAGA+AGG - chr4_1:48928259-48928278 None:intergenic 25.0%
! ATAAAAAAAGATTGACACAC+AGG - chr4_1:48929169-48929188 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:48925771-48925790 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:48926663-48926682 Msa0552340:intron 25.0%
! GCAAAAAAAATGTCAAATGT+TGG - chr4_1:48929608-48929627 None:intergenic 25.0%
!!! TTTTTTTTGCTTCTCATTGT+TGG + chr4_1:48929618-48929637 Msa0552340:intron 25.0%
! GTTATTTGCAGTAATGTTTA+AGG + chr4_1:48930282-48930301 Msa0552340:intron 25.0%
! AGGAATAACAAAATCGAAAA+AGG - chr4_1:48930331-48930350 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+CGG - chr4_1:48930383-48930402 None:intergenic 25.0%
! AACCATTGTTCTGTTATAAA+AGG + chr4_1:48930501-48930520 Msa0552340:intron 25.0%
! TAGAGATGAAATGAAAGTTA+AGG - chr4_1:48930610-48930629 None:intergenic 25.0%
!!! GCTACTCTGTTTTTATTTAT+GGG - chr4_1:48930643-48930662 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG - chr4_1:48930688-48930707 None:intergenic 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG + chr4_1:48930780-48930799 Msa0552340:intron 25.0%
!!! TCTTTTGAACAGTTTGAAAT+TGG + chr4_1:48931092-48931111 Msa0552340:intron 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG - chr4_1:48931162-48931181 None:intergenic 25.0%
! AACATTACAAGGAAAAAATG+AGG - chr4_1:48931184-48931203 None:intergenic 25.0%
! ATATTTCAACGAACATTACA+AGG - chr4_1:48931195-48931214 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG + chr4_1:48931227-48931246 Msa0552340:intron 25.0%
! ATAATTTGGCAAATTGTAGA+AGG - chr4_1:48932228-48932247 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG + chr4_1:48932270-48932289 Msa0552340:intron 25.0%
!! TATAAAGTGTCAGTATCTTA+TGG - chr4_1:48932790-48932809 None:intergenic 25.0%
! TAAGATACTGACACTTTATA+TGG + chr4_1:48932790-48932809 Msa0552340:intron 25.0%
! TGTAAATTTATGGTTATGCT+TGG + chr4_1:48932853-48932872 Msa0552340:intron 25.0%
!!! GTTTTTTCAATCTATTCTCA+AGG + chr4_1:48932875-48932894 Msa0552340:intron 25.0%
! GAATGTCAAAATCCATTTAA+AGG - chr4_1:48934010-48934029 None:intergenic 25.0%
!! GTTATTTCGATTAAGAACTT+TGG + chr4_1:48934235-48934254 Msa0552340:intron 25.0%
! TAGTTAGTTATGTTAAAGTC+TGG + chr4_1:48934387-48934406 Msa0552340:intron 25.0%
! AGTTAGTTATGTTAAAGTCT+GGG + chr4_1:48934388-48934407 Msa0552340:intron 25.0%
!! TACAATCTTTTCATTTAGTG+TGG + chr4_1:48934480-48934499 Msa0552340:intron 25.0%
!! GTAAAATGCTTTTCAAAACA+AGG - chr4_1:48935098-48935117 None:intergenic 25.0%
! GAACAAAAAAAATAGTGTTC+AGG - chr4_1:48935171-48935190 None:intergenic 25.0%
!!! CACTATTTTTTTTGTTCCTA+TGG + chr4_1:48935174-48935193 Msa0552340:intron 25.0%
!! ATCAGTTTCTAGATTCTAAA+CGG - chr4_1:48935215-48935234 None:intergenic 25.0%
!!! ACTGAAATGTTGATTTAATG+TGG - chr4_1:48935366-48935385 None:intergenic 25.0%
! AAGTGAAGTAAATATTTGTG+CGG + chr4_1:48935389-48935408 Msa0552340:intron 25.0%
! CAATAGTCAATATTGTTCAT+AGG - chr4_1:48935420-48935439 None:intergenic 25.0%
! CTAAGTATAAAAAAACCTCA+TGG + chr4_1:48935460-48935479 Msa0552340:intron 25.0%
! CATTTATTAATCCAAACTTG+TGG + chr4_1:48935692-48935711 Msa0552340:three_prime_UTR 25.0%
! ATTAAAACTTTCCACAAGTT+TGG - chr4_1:48935706-48935725 None:intergenic 25.0%
! GAAACAGGACTAAAAAAAAA+TGG - chr4_1:48935729-48935748 None:intergenic 25.0%
!! TATGGTTGTAGATTATGTTT+TGG + chr4_1:48935762-48935781 Msa0552340:three_prime_UTR 25.0%
! AAATACCTTCAATGCAATTT+CGG + chr4_1:48935915-48935934 Msa0552340:three_prime_UTR 25.0%
CTTTGTTCAAAAAACCTAAG+TGG + chr4_1:48923392-48923411 Msa0552340:five_prime_UTR 30.0%
AATAAAGAAGATTACCGATC+TGG - chr4_1:48923548-48923567 None:intergenic 30.0%
!! TTGTTTTGTCACAAAGGATA+AGG - chr4_1:48923571-48923590 None:intergenic 30.0%
CAGGTGAAAACTACAAAATT+CGG - chr4_1:48923770-48923789 None:intergenic 30.0%
!!! TGAAAAGGGGGAATTTTTTT+TGG - chr4_1:48923913-48923932 None:intergenic 30.0%
AGGTGAAAACTGAATGAAAA+GGG - chr4_1:48923927-48923946 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! GGTGAAAAGGCAAAAAATTT+TGG - chr4_1:48924075-48924094 None:intergenic 30.0%
TATTCCGAATTTCATAGTTC+TGG + chr4_1:48924130-48924149 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48924302-48924321 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48924302-48924321 Msa0552340:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48924303-48924322 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
GGTGAAAAGGCAAAAAAATT+TGG - chr4_1:48925450-48925469 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:48925827-48925846 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:48925827-48925846 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:48925827-48925846 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:48924452-48924471 Msa0552340:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:48924453-48924472 Msa0552340:intron 30.0%
! GGTGAAAAGGCAAAAATTTT+TGG - chr4_1:48927071-48927090 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
CGATCTTGAACTACAAAATT+AGG - chr4_1:48927807-48927826 None:intergenic 30.0%
! AATTTTGTAGTTCAAGATCG+AGG + chr4_1:48927807-48927826 Msa0552340:intron 30.0%
! ATTTTGTAGTTCAAGATCGA+GGG + chr4_1:48927808-48927827 Msa0552340:intron 30.0%
CGATCCATAACTACAAAATT+CGG - chr4_1:48927974-48927993 None:intergenic 30.0%
! AATTTTGTAGTTATGGATCG+AGG + chr4_1:48927974-48927993 Msa0552340:intron 30.0%
! ATTTTGTAGTTATGGATCGA+GGG + chr4_1:48927975-48927994 Msa0552340:intron 30.0%
! CGATCTAGAACTACAAAATT+AGG - chr4_1:48928144-48928163 None:intergenic 30.0%
!!! AATTTTGTAGTTCTAGATCG+AGG + chr4_1:48928144-48928163 Msa0552340:intron 30.0%
!!! ATTTTGTAGTTCTAGATCGA+GGG + chr4_1:48928145-48928164 Msa0552340:intron 30.0%
CGATCCATAACTACAAAATT+CGG - chr4_1:48927974-48927993 None:intergenic 30.0%
! AATTTTGTAGTTATGGATCG+AGG + chr4_1:48927974-48927993 Msa0552340:intron 30.0%
! ATTTTGTAGTTATGGATCGA+GGG + chr4_1:48927975-48927994 Msa0552340:intron 30.0%
! CGATCTAGAACTACAAAATT+AGG - chr4_1:48928144-48928163 None:intergenic 30.0%
!!! AATTTTGTAGTTCTAGATCG+AGG + chr4_1:48928144-48928163 Msa0552340:intron 30.0%
!!! ATTTTGTAGTTCTAGATCGA+GGG + chr4_1:48928145-48928164 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:48924302-48924321 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:48924302-48924321 Msa0552340:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:48924303-48924322 Msa0552340:intron 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG - chr4_1:48929045-48929064 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:48923965-48923984 Msa0552340:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:48925827-48925846 Msa0552340:intron 30.0%
AGATCCAGAACTACAAAATT+AGG - chr4_1:48929441-48929460 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCT+AGG + chr4_1:48929441-48929460 Msa0552340:intron 30.0%
!!! ATTTTGTAGTTCTGGATCTA+GGG + chr4_1:48929442-48929461 Msa0552340:intron 30.0%
ACTTAAACCTTGAAAAGTTG+GGG - chr4_1:48929719-48929738 None:intergenic 30.0%
GACTTAAACCTTGAAAAGTT+GGG - chr4_1:48929720-48929739 None:intergenic 30.0%
TGACTTAAACCTTGAAAAGT+TGG - chr4_1:48929721-48929740 None:intergenic 30.0%
!! GCTTTAGATTTTGTAAGACT+TGG - chr4_1:48929752-48929771 None:intergenic 30.0%
GTTCAGAAAAGAGAAAAAGA+AGG - chr4_1:48929819-48929838 None:intergenic 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG - chr4_1:48929868-48929887 None:intergenic 30.0%
ATTTCCCTTAAATGTCCTTT+GGG - chr4_1:48929923-48929942 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG - chr4_1:48929924-48929943 None:intergenic 30.0%
TATCAAGAACTTAATTTCGG+AGG + chr4_1:48930042-48930061 Msa0552340:intron 30.0%
AATAAGACGAAAGAATGAAC+AGG - chr4_1:48930143-48930162 None:intergenic 30.0%
GAAACAACGATGAGAAAAAA+GGG - chr4_1:48930194-48930213 None:intergenic 30.0%
AGAAACAACGATGAGAAAAA+AGG - chr4_1:48930195-48930214 None:intergenic 30.0%
!! GTTTTAAATAGCAACTAGAG+TGG - chr4_1:48930484-48930503 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG - chr4_1:48930506-48930525 None:intergenic 30.0%
!!! GGCTACTCTGTTTTTATTTA+TGG - chr4_1:48930644-48930663 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG - chr4_1:48930678-48930697 None:intergenic 30.0%
CATCAGATGTAAAGAAATGA+TGG + chr4_1:48930715-48930734 Msa0552340:intron 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG - chr4_1:48930858-48930877 None:intergenic 30.0%
! AAAGAAAGGTGTATTTGCAT+GGG - chr4_1:48931148-48931167 None:intergenic 30.0%
! TAAAGAAAGGTGTATTTGCA+TGG - chr4_1:48931149-48931168 None:intergenic 30.0%
!! AGAGATTTCCATTTTTCTCA+AGG - chr4_1:48931484-48931503 None:intergenic 30.0%
TATATAAACAGGAAGATACC+AGG - chr4_1:48931655-48931674 None:intergenic 30.0%
ATATAACAATCAGTGAGTTC+TGG - chr4_1:48931742-48931761 None:intergenic 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG - chr4_1:48931779-48931798 None:intergenic 30.0%
! TTTGTGCAAATTTTTACTGC+AGG - chr4_1:48931816-48931835 None:intergenic 30.0%
CACAAATTTGCACAAATTTG+AGG + chr4_1:48931847-48931866 Msa0552340:intron 30.0%
! ATGCTTCTTGTGATTTCTTT+TGG + chr4_1:48931891-48931910 Msa0552340:intron 30.0%
GTACGAATCTATCATCAATT+TGG + chr4_1:48931913-48931932 Msa0552340:intron 30.0%
CAGTAATTCAAAAAGCTCAA+TGG - chr4_1:48931968-48931987 None:intergenic 30.0%
! TTTTGAATTACTGTCTCGAA+TGG + chr4_1:48931975-48931994 Msa0552340:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG - chr4_1:48932141-48932160 None:intergenic 30.0%
TACAGACATAATTAGCTACA+TGG - chr4_1:48932316-48932335 None:intergenic 30.0%
! TCATAATCTCAAGTCTTATC+TGG + chr4_1:48932434-48932453 Msa0552340:intron 30.0%
!! CTTTCTTTTTGAAAAGGCAA+AGG - chr4_1:48932677-48932696 None:intergenic 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:48933047-48933066 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:48933048-48933067 None:intergenic 30.0%
AACGAAAACTAAATCTTCAC+GGG - chr4_1:48933123-48933142 None:intergenic 30.0%
CAACGAAAACTAAATCTTCA+CGG - chr4_1:48933124-48933143 None:intergenic 30.0%
! TTATGAAACTTTAAGAGCTC+TGG + chr4_1:48933859-48933878 Msa0552340:three_prime_UTR 30.0%
TGTTATTACCTCCCTTTAAA+TGG + chr4_1:48933995-48934014 Msa0552340:intron 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG + chr4_1:48934129-48934148 Msa0552340:intron 30.0%
!!! ATTGAAATGCTGATTTTCAC+TGG + chr4_1:48934209-48934228 Msa0552340:intron 30.0%
GTAATAATAGGCATCACTAA+AGG - chr4_1:48934263-48934282 None:intergenic 30.0%
ACACGACATAGAGTAATAAT+AGG - chr4_1:48934275-48934294 None:intergenic 30.0%
! CATTTTATCTGCATATGAAG+AGG + chr4_1:48934298-48934317 Msa0552340:intron 30.0%
GTTAGTTATGTTAAAGTCTG+GGG + chr4_1:48934389-48934408 Msa0552340:intron 30.0%
TTAGTTATGTTAAAGTCTGG+GGG + chr4_1:48934390-48934409 Msa0552340:intron 30.0%
AATGTTGTATACTCGTCATA+CGG - chr4_1:48934437-48934456 None:intergenic 30.0%
! GATTCATTTCTTTTCGTTTG+TGG + chr4_1:48934519-48934538 Msa0552340:intron 30.0%
CGTGTATTCTTTGTATGTAT+TGG + chr4_1:48934809-48934828 Msa0552340:intron 30.0%
TGATTATGTGAGAAGAAATC+TGG + chr4_1:48934847-48934866 Msa0552340:intron 30.0%
ATCTAACATAGGGTTTACAA+AGG + chr4_1:48934879-48934898 Msa0552340:intron 30.0%
TCTAACATAGGGTTTACAAA+GGG + chr4_1:48934880-48934899 Msa0552340:intron 30.0%
! TCAGTTTCTAGATTCTAAAC+GGG - chr4_1:48935214-48935233 None:intergenic 30.0%
CAAGGAAAAAACTAGATTAG+GGG - chr4_1:48935315-48935334 None:intergenic 30.0%
GCAAGGAAAAAACTAGATTA+GGG - chr4_1:48935316-48935335 None:intergenic 30.0%
!! TGTTTTTATCTTGTAGTCTC+AGG + chr4_1:48935534-48935553 Msa0552340:intron 30.0%
AAATACATAATTGAGCGCAA+TGG - chr4_1:48936102-48936121 None:intergenic 30.0%
CAAAAGAACTTGCAATTAAG+CGG - chr4_1:48936268-48936287 None:intergenic 30.0%
!! CTTCTTTTGAAGAACCAGAT+CGG + chr4_1:48923531-48923550 Msa0552340:five_prime_UTR 35.0%
TTTGAAAACCCAGATCTATC+TGG + chr4_1:48923617-48923636 Msa0552340:intron 35.0%
ACAAAAGAGATTATCCGATC+TGG - chr4_1:48923690-48923709 None:intergenic 35.0%
! TATTCCGAATTTTGTAGCTC+TGG + chr4_1:48923807-48923826 Msa0552340:intron 35.0%
GTGAAAACTGAATGAAAAGG+GGG - chr4_1:48923925-48923944 None:intergenic 35.0%
GGTGAAAACTGAATGAAAAG+GGG - chr4_1:48923926-48923945 None:intergenic 35.0%
CAGGTGAAAACTGAATGAAA+AGG - chr4_1:48923928-48923947 None:intergenic 35.0%
! CTTTTCATTCAGTTTTCACC+TGG + chr4_1:48923926-48923945 Msa0552340:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48924088-48924107 None:intergenic 35.0%
CGATCCAGAACTATGAAATT+CGG - chr4_1:48924137-48924156 None:intergenic 35.0%
!! AATTTCATAGTTCTGGATCG+AGG + chr4_1:48924137-48924156 Msa0552340:intron 35.0%
!! ATTTCATAGTTCTGGATCGA+GGG + chr4_1:48924138-48924157 Msa0552340:intron 35.0%
GTACATGTGAAAACTGAATG+AGG - chr4_1:48924261-48924280 None:intergenic 35.0%
TACAGGTGAAAAACTGAATG+AGG - chr4_1:48924576-48924595 None:intergenic 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48924088-48924107 None:intergenic 35.0%
TAACAGGTGAAAACTGAATG+AGG - chr4_1:48925471-48925490 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
! GGTGAAAAGGCAAATTTTGT+TGG - chr4_1:48925606-48925625 None:intergenic 35.0%
GAAAACTGAATGTGGTGAAA+AGG - chr4_1:48925619-48925638 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+TGG - chr4_1:48925627-48925646 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
CGATCCAGAACTACAAAATT+AGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+TGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGT+GGG + chr4_1:48926671-48926690 Msa0552340:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48924088-48924107 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
! CGTGAAAAGGCAAATTTTGT+TGG - chr4_1:48927236-48927255 None:intergenic 35.0%
GAAAACTGAATGACGTGAAA+AGG - chr4_1:48925785-48925804 None:intergenic 35.0%
CGTTCCAGAACTACAAAATT+CGG - chr4_1:48927298-48927317 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGAACG+AGG + chr4_1:48927298-48927317 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGAACGA+GGG + chr4_1:48927299-48927318 Msa0552340:intron 35.0%
CGATCTTGAACTACAGAATT+AGG - chr4_1:48927469-48927488 None:intergenic 35.0%
AATTCTGTAGTTCAAGATCG+AGG + chr4_1:48927469-48927488 Msa0552340:intron 35.0%
ATTCTGTAGTTCAAGATCGA+GGG + chr4_1:48927470-48927489 Msa0552340:intron 35.0%
CGTTCCAGAACTACAAAATT+CGG - chr4_1:48927298-48927317 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGAACG+AGG + chr4_1:48927298-48927317 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGAACGA+GGG + chr4_1:48927299-48927318 Msa0552340:intron 35.0%
! TTTTGTAGTTATGGATCGAG+GGG + chr4_1:48927976-48927995 Msa0552340:intron 35.0%
! TTTTGTAGTTATGGATCGAG+GGG + chr4_1:48927976-48927995 Msa0552340:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:48923972-48923991 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:48923972-48923991 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
GTACAGGTGTAAACTTAATG+AGG - chr4_1:48928901-48928920 None:intergenic 35.0%
! TATTCCGCATTTTGTAGTTC+TGG + chr4_1:48928935-48928954 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:48923973-48923992 Msa0552340:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:48924088-48924107 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:48925627-48925646 None:intergenic 35.0%
GGATCCAGAACTACAAAATT+CGG - chr4_1:48929107-48929126 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCC+AGG + chr4_1:48929107-48929126 Msa0552340:intron 35.0%
!!! ATTTTGTAGTTCTGGATCCA+GGG + chr4_1:48929108-48929127 Msa0552340:intron 35.0%
CAGAATCTGCTCTTCAATTA+CGG - chr4_1:48929646-48929665 None:intergenic 35.0%
!!! TGGTTTTAAACGCTTACTCT+TGG + chr4_1:48929685-48929704 Msa0552340:intron 35.0%
!!! GGTTTTAAACGCTTACTCTT+GGG + chr4_1:48929686-48929705 Msa0552340:intron 35.0%
CTTAAACCTTGAAAAGTTGG+GGG - chr4_1:48929718-48929737 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG + chr4_1:48929905-48929924 Msa0552340:intron 35.0%
TAACACCCAAAGGACATTTA+AGG + chr4_1:48929915-48929934 Msa0552340:intron 35.0%
AACACCCAAAGGACATTTAA+GGG + chr4_1:48929916-48929935 Msa0552340:intron 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG - chr4_1:48930181-48930200 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG - chr4_1:48930182-48930201 None:intergenic 35.0%
AACGATGAGAAAAAAGGGAA+AGG - chr4_1:48930189-48930208 None:intergenic 35.0%
TTGAAATTGGTATGGCTAGT+TGG - chr4_1:48930665-48930684 None:intergenic 35.0%
! CTGATTGGTTGAAATTGGTA+TGG - chr4_1:48930673-48930692 None:intergenic 35.0%
CACAAATAAGAGGTTAAGGT+TGG - chr4_1:48930812-48930831 None:intergenic 35.0%
! AGAAAAGGTGCACAAATAAG+AGG - chr4_1:48930822-48930841 None:intergenic 35.0%
! GGTTGACTGACTTAAAGAAA+AGG - chr4_1:48930837-48930856 None:intergenic 35.0%
! GTGATGAAGAGAGGTATATT+GGG - chr4_1:48930897-48930916 None:intergenic 35.0%
! AGTGATGAAGAGAGGTATAT+TGG - chr4_1:48930898-48930917 None:intergenic 35.0%
AGAATCTTAGTGATGAAGAG+AGG - chr4_1:48930906-48930925 None:intergenic 35.0%
AAGAGACAAATCAGAACAGT+GGG - chr4_1:48931076-48931095 None:intergenic 35.0%
AAAGAGACAAATCAGAACAG+TGG - chr4_1:48931077-48931096 None:intergenic 35.0%
! GATATTAGCTTATGGCCATT+TGG - chr4_1:48931259-48931278 None:intergenic 35.0%
TGGCCATAAGCTAATATCTT+AGG + chr4_1:48931261-48931280 Msa0552340:intron 35.0%
! CAGCCTAAGATATTAGCTTA+TGG - chr4_1:48931267-48931286 None:intergenic 35.0%
! AACTCCCAAACTTTCTTTTG+AGG + chr4_1:48931772-48931791 Msa0552340:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG - chr4_1:48931780-48931799 None:intergenic 35.0%
TGGAAAATCTCAGAAGCTAT+TGG - chr4_1:48931948-48931967 None:intergenic 35.0%
TACGATGCAGATAAAAGAAC+CGG - chr4_1:48932027-48932046 None:intergenic 35.0%
ATTACACTCTTTAGTCCACA+TGG + chr4_1:48932051-48932070 Msa0552340:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG + chr4_1:48932063-48932082 Msa0552340:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG - chr4_1:48932069-48932088 None:intergenic 35.0%
GATTCTGCTTTATAACTGAG+GGG - chr4_1:48932140-48932159 None:intergenic 35.0%
CTGATTCTGCTTTATAACTG+AGG - chr4_1:48932142-48932161 None:intergenic 35.0%
ACATAATTAGCTACATGGTG+TGG - chr4_1:48932311-48932330 None:intergenic 35.0%
TTACACTATTTGAGCTTTGC+AGG + chr4_1:48932385-48932404 Msa0552340:intron 35.0%
GAGATTATGACATAGATGCA+AGG - chr4_1:48932424-48932443 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG - chr4_1:48932465-48932484 None:intergenic 35.0%
TCAGAAGGTAGAAGTTGTAT+TGG + chr4_1:48932619-48932638 Msa0552340:three_prime_UTR 35.0%
TTAAGTAAGTAGTCTTCCCT+CGG - chr4_1:48933085-48933104 None:intergenic 35.0%
GAAGACTACTTACTTAACAC+TGG + chr4_1:48933088-48933107 Msa0552340:intron 35.0%
!! TTACTTAACACTGGCTTTCT+TGG + chr4_1:48933097-48933116 Msa0552340:intron 35.0%
! GGAGTACTATAGTCAACAAT+GGG - chr4_1:48933186-48933205 None:intergenic 35.0%
!! AGGAGTACTATAGTCAACAA+TGG - chr4_1:48933187-48933206 None:intergenic 35.0%
TAGGAAGACTAAATGATAGC+AGG - chr4_1:48933207-48933226 None:intergenic 35.0%
AAACAGAATGAACAGCATTG+AGG - chr4_1:48933486-48933505 None:intergenic 35.0%
!! AACTTTAAGAGCTCTGGATT+CGG + chr4_1:48933865-48933884 Msa0552340:three_prime_UTR 35.0%
!! AAGAGCATTTATCTCTTCCT+CGG - chr4_1:48933918-48933937 None:intergenic 35.0%
!! TGGCAGATTACTTACTTTTG+GGG - chr4_1:48933968-48933987 None:intergenic 35.0%
!! CTGGCAGATTACTTACTTTT+GGG - chr4_1:48933969-48933988 None:intergenic 35.0%
! TCTGGCAGATTACTTACTTT+TGG - chr4_1:48933970-48933989 None:intergenic 35.0%
GGAGGTAATAACAATTGATC+TGG - chr4_1:48933988-48934007 None:intergenic 35.0%
GTCAAAATCCATTTAAAGGG+AGG - chr4_1:48934006-48934025 None:intergenic 35.0%
! ATATTTTCTTTCCCCATCCT+CGG + chr4_1:48934058-48934077 Msa0552340:intron 35.0%
! ATAGTGAGTTTCATTTTCCG+AGG - chr4_1:48934078-48934097 None:intergenic 35.0%
! TCTTTTCATTTAGTGTGGAG+TGG + chr4_1:48934485-48934504 Msa0552340:intron 35.0%
GACACAGGATAATTCAAATG+CGG + chr4_1:48934547-48934566 Msa0552340:three_prime_UTR 35.0%
TGATTGGAGCAAGTTTATGT+TGG + chr4_1:48934614-48934633 Msa0552340:three_prime_UTR 35.0%
AACTTGATGAGAACGAAAAC+AGG + chr4_1:48934956-48934975 Msa0552340:intron 35.0%
TGTTCAGGTGAAGTTTCAAT+AGG - chr4_1:48935156-48935175 None:intergenic 35.0%
GGAGAAATCATTCATTCCAT+AGG - chr4_1:48935193-48935212 None:intergenic 35.0%
GGCAAGGAAAAAACTAGATT+AGG - chr4_1:48935317-48935336 None:intergenic 35.0%
GTCAATATTGTTCATAGGCA+TGG - chr4_1:48935415-48935434 None:intergenic 35.0%
GGAACAAATTATAAGGCTTC+CGG - chr4_1:48935998-48936017 None:intergenic 35.0%
GTTCCTTAACATTGTAAACG+TGG + chr4_1:48936013-48936032 Msa0552340:three_prime_UTR 35.0%
TAGCCACGTTTACAATGTTA+AGG - chr4_1:48936019-48936038 None:intergenic 35.0%
TGGCTAATTCTATCCAGAAA+CGG + chr4_1:48936033-48936052 Msa0552340:three_prime_UTR 35.0%
! TGGCATTGAATGCTATCAAA+AGG - chr4_1:48936322-48936341 None:intergenic 35.0%
CGCAACACAACATAACTAAG+TGG + chr4_1:48923428-48923447 Msa0552340:five_prime_UTR 40.0%
GTTGTTTGTCTTTCAAACCC+AGG + chr4_1:48923462-48923481 Msa0552340:five_prime_UTR 40.0%
TGCGAAATTGCAGACAGATT+GGG - chr4_1:48923501-48923520 None:intergenic 40.0%
!! CGATCTGGTTCTTCAAAAGA+AGG - chr4_1:48923533-48923552 None:intergenic 40.0%
!! GGTTGTTCTAAAGGAGATTG+AGG - chr4_1:48923669-48923688 None:intergenic 40.0%
!! CTCCTTTAGAACAACCAGAT+CGG + chr4_1:48923673-48923692 Msa0552340:intron 40.0%
ATCCGATCTGGTTGTTCTAA+AGG - chr4_1:48923678-48923697 None:intergenic 40.0%
CGATCCAGAGCTACAAAATT+CGG - chr4_1:48923814-48923833 None:intergenic 40.0%
!!! AATTTTGTAGCTCTGGATCG+AGG + chr4_1:48923814-48923833 Msa0552340:intron 40.0%
!!! ATTTTGTAGCTCTGGATCGA+GGG + chr4_1:48923815-48923834 Msa0552340:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48924096-48924115 None:intergenic 40.0%
!!! GTAGGGGTGTTGTTTTTATC+AGG + chr4_1:48924168-48924187 Msa0552340:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48924096-48924115 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48924096-48924115 None:intergenic 40.0%
GTACAGGTGAAAACTGAATG+AGG - chr4_1:48924875-48924894 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48924096-48924115 None:intergenic 40.0%
GTACAGGTGAAAACTGAATG+AGG - chr4_1:48924875-48924894 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:48924096-48924115 None:intergenic 40.0%
!!! GTAGGGGTGTTGTTTTTATC+AGG + chr4_1:48924168-48924187 Msa0552340:intron 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:48925834-48925853 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:48925834-48925853 Msa0552340:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:48925835-48925854 Msa0552340:intron 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:48925834-48925853 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:48925834-48925853 Msa0552340:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:48925835-48925854 Msa0552340:intron 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:48925834-48925853 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:48925834-48925853 Msa0552340:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:48925835-48925854 Msa0552340:intron 40.0%
!!! TTTTGTAGTTCTGGAACGAG+GGG + chr4_1:48927300-48927319 Msa0552340:intron 40.0%
!!! TTTTGTAGTTCTGGAACGAG+GGG + chr4_1:48927300-48927319 Msa0552340:intron 40.0%
ACCTGATACATACAATTCCC+CGG - chr4_1:48927504-48927523 None:intergenic 40.0%
CGATCCAGAACTACAAAATG+CGG - chr4_1:48928942-48928961 None:intergenic 40.0%
!!! CATTTTGTAGTTCTGGATCG+AGG + chr4_1:48928942-48928961 Msa0552340:intron 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:48925834-48925853 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:48925834-48925853 Msa0552340:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:48925835-48925854 Msa0552340:intron 40.0%
! GCAGAGATGTTGTTTGTATC+AGG + chr4_1:48929472-48929491 Msa0552340:intron 40.0%
AGCAGTAACGATGTTCATTC+TGG + chr4_1:48929769-48929788 Msa0552340:intron 40.0%
CAAAATTGCAGATGGAAAGG+CGG - chr4_1:48929860-48929879 None:intergenic 40.0%
GTGCAAAATTGCAGATGGAA+AGG - chr4_1:48929863-48929882 None:intergenic 40.0%
ACAAGTAGCGTTTCAAGAAC+TGG + chr4_1:48929989-48930008 Msa0552340:intron 40.0%
AGAACTTAATTTCGGAGGCA+CGG + chr4_1:48930047-48930066 Msa0552340:intron 40.0%
TGTTGTGCATAATCGCAGAT+GGG - chr4_1:48930244-48930263 None:intergenic 40.0%
TTGTTGTGCATAATCGCAGA+TGG - chr4_1:48930245-48930264 None:intergenic 40.0%
TGTCTATGCTACAGAGCTAT+AGG + chr4_1:48930457-48930476 Msa0552340:intron 40.0%
GGTGCACAAATAAGAGGTTA+AGG - chr4_1:48930816-48930835 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG - chr4_1:48930867-48930886 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG + chr4_1:48930867-48930886 Msa0552340:intron 40.0%
! CCATGCTTTTGTGAATGCTT+GGG + chr4_1:48930868-48930887 Msa0552340:intron 40.0%
TTCCAGATCACGTGTAGATT+AGG + chr4_1:48930940-48930959 Msa0552340:intron 40.0%
TCCAGATCACGTGTAGATTA+GGG + chr4_1:48930941-48930960 Msa0552340:intron 40.0%
!! TTAGGGTATTGCATATTCCC+TGG + chr4_1:48930958-48930977 Msa0552340:intron 40.0%
!! TAGGGTATTGCATATTCCCT+GGG + chr4_1:48930959-48930978 Msa0552340:intron 40.0%
TTATTTGTGACACACTCCCA+GGG - chr4_1:48930978-48930997 None:intergenic 40.0%
TCCTCTTCCACTTCTTAGTT+AGG + chr4_1:48931121-48931140 Msa0552340:intron 40.0%
CCTCTTCCACTTCTTAGTTA+GGG + chr4_1:48931122-48931141 Msa0552340:intron 40.0%
TGCCTCTTCGAATTCTTGAA+CGG + chr4_1:48931338-48931357 Msa0552340:CDS 40.0%
! ACCTGAAGCTTTGTGGTATT+GGG + chr4_1:48931363-48931382 Msa0552340:CDS 40.0%
!! CAAGGGTACCTTGAGAAAAA+TGG + chr4_1:48931473-48931492 Msa0552340:exon 40.0%
TAAACAGGAAGATACCAGGA+GGG - chr4_1:48931651-48931670 None:intergenic 40.0%
ATAAACAGGAAGATACCAGG+AGG - chr4_1:48931652-48931671 None:intergenic 40.0%
TCATTATCTGCTGCTAGTTC+CGG + chr4_1:48932005-48932024 Msa0552340:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG - chr4_1:48932100-48932119 None:intergenic 40.0%
TACCATCAGTTCAAAAGTCC+CGG + chr4_1:48932111-48932130 Msa0552340:intron 40.0%
TTTATAACTGAGGGGATACC+GGG - chr4_1:48932132-48932151 None:intergenic 40.0%
CTTTATAACTGAGGGGATAC+CGG - chr4_1:48932133-48932152 None:intergenic 40.0%
CTATTTGAGCTTTGCAGGTT+CGG + chr4_1:48932390-48932409 Msa0552340:intron 40.0%
TATTTGAGCTTTGCAGGTTC+GGG + chr4_1:48932391-48932410 Msa0552340:intron 40.0%
CTTCCAGTCACAATTAGGTA+TGG - chr4_1:48932460-48932479 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG + chr4_1:48932604-48932623 Msa0552340:three_prime_UTR 40.0%
GGTAGAAGTTGTATTGGAGT+CGG + chr4_1:48932625-48932644 Msa0552340:three_prime_UTR 40.0%
AGTTGTATTGGAGTCGGTAT+AGG + chr4_1:48932631-48932650 Msa0552340:three_prime_UTR 40.0%
!! GTCGCGCTTTCTTTTTGAAA+AGG - chr4_1:48932683-48932702 None:intergenic 40.0%
! CTGCTATCATTTTGTTCCGA+GGG + chr4_1:48933066-48933085 Msa0552340:intron 40.0%
TGTTTGGAGACTTCCAGATA+TGG + chr4_1:48933302-48933321 Msa0552340:three_prime_UTR 40.0%
GTTTGGAGACTTCCAGATAT+GGG + chr4_1:48933303-48933322 Msa0552340:three_prime_UTR 40.0%
CATCAGATATAGCCCATATC+TGG - chr4_1:48933318-48933337 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG + chr4_1:48933316-48933335 Msa0552340:three_prime_UTR 40.0%
TCGTGTTTGAAGACACTTGA+AGG + chr4_1:48933347-48933366 Msa0552340:three_prime_UTR 40.0%
CGTGTTTGAAGACACTTGAA+GGG + chr4_1:48933348-48933367 Msa0552340:three_prime_UTR 40.0%
!!! AGTGCTTGGTGTTTTCTTGA+TGG + chr4_1:48933518-48933537 Msa0552340:three_prime_UTR 40.0%
! TCTTGATGGCTACAATGCTA+AGG + chr4_1:48933532-48933551 Msa0552340:three_prime_UTR 40.0%
TCTTCCTGTCCACAAATACA+AGG + chr4_1:48933934-48933953 Msa0552340:three_prime_UTR 40.0%
GAAACCTTGTATTTGTGGAC+AGG - chr4_1:48933941-48933960 None:intergenic 40.0%
GTCCACAAATACAAGGTTTC+TGG + chr4_1:48933941-48933960 Msa0552340:three_prime_UTR 40.0%
GACCAGAAACCTTGTATTTG+TGG - chr4_1:48933946-48933965 None:intergenic 40.0%
! AGTTTCATTTTCCGAGGATG+GGG - chr4_1:48934072-48934091 None:intergenic 40.0%
! GAGTTTCATTTTCCGAGGAT+GGG - chr4_1:48934073-48934092 None:intergenic 40.0%
! TGAGTTTCATTTTCCGAGGA+TGG - chr4_1:48934074-48934093 None:intergenic 40.0%
CAGGATAATTCAAATGCGGT+TGG + chr4_1:48934551-48934570 Msa0552340:three_prime_UTR 40.0%
AATGAAACAGACCTGAAGCA+AGG - chr4_1:48934663-48934682 None:intergenic 40.0%
AACATAGGGTTTACAAAGGG+TGG + chr4_1:48934883-48934902 Msa0552340:intron 40.0%
! AACTCAAGCTCATGATGGAA+TGG - chr4_1:48935131-48935150 None:intergenic 40.0%
AGGTAAACTCAAGCTCATGA+TGG - chr4_1:48935136-48935155 None:intergenic 40.0%
GGAAAAAACTAGATTAGGGG+AGG - chr4_1:48935312-48935331 None:intergenic 40.0%
!!! CTACACAACTTTTTTGGGCA+AGG - chr4_1:48935333-48935352 None:intergenic 40.0%
! TCGACAAAGTATCAACCATG+AGG - chr4_1:48935478-48935497 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG - chr4_1:48935829-48935848 None:intergenic 40.0%
AACTGCCGAAATTGCATTGA+AGG - chr4_1:48935923-48935942 None:intergenic 40.0%
GGCTAATTCTATCCAGAAAC+GGG + chr4_1:48936034-48936053 Msa0552340:three_prime_UTR 40.0%
TTAAAGACTCCCGTGAATGT+CGG - chr4_1:48936150-48936169 None:intergenic 40.0%
ACGGGAGTCTTTAAGTCATA+AGG + chr4_1:48936156-48936175 Msa0552340:three_prime_UTR 40.0%
TGAACCCAGTGATGATAAAG+CGG + chr4_1:48936286-48936305 Msa0552340:three_prime_UTR 40.0%
TGTCTTTCAAACCCAGGTCT+AGG + chr4_1:48923468-48923487 Msa0552340:five_prime_UTR 45.0%
TTTCAAACCCAGGTCTAGGT+TGG + chr4_1:48923472-48923491 Msa0552340:five_prime_UTR 45.0%
GTGCGAAATTGCAGACAGAT+TGG - chr4_1:48923502-48923521 None:intergenic 45.0%
CTGGGTTTCCAGATAGATCT+GGG - chr4_1:48923628-48923647 None:intergenic 45.0%
TCTGGGTTTCCAGATAGATC+TGG - chr4_1:48923629-48923648 None:intergenic 45.0%
TCTATCTGGAAACCCAGATC+TGG + chr4_1:48923631-48923650 Msa0552340:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:48925836-48925855 Msa0552340:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:48925836-48925855 Msa0552340:intron 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:48925836-48925855 Msa0552340:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
! CACCTCATTCAGTTTTCACC+TGG + chr4_1:48924091-48924110 Msa0552340:intron 45.0%
CTCCAGGTGAAAACTGAATG+AGG - chr4_1:48926794-48926813 None:intergenic 45.0%
! CACCTCATTCAGTTTTCACC+TGG + chr4_1:48924091-48924110 Msa0552340:intron 45.0%
CTCCAGGTGAAAACTGAATG+AGG - chr4_1:48926794-48926813 None:intergenic 45.0%
! CACCTCATTCAGTTTTCACC+TGG + chr4_1:48924091-48924110 Msa0552340:intron 45.0%
CTCCAGGTGAAAACTGAATG+AGG - chr4_1:48926794-48926813 None:intergenic 45.0%
CTGATACAAACAACACCCCT+AGG - chr4_1:48925701-48925720 None:intergenic 45.0%
!! CTAGGGGTGTTGTTTGTATC+AGG + chr4_1:48927164-48927183 Msa0552340:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:48927500-48927519 Msa0552340:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:48927500-48927519 Msa0552340:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:48923845-48923864 Msa0552340:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:48927500-48927519 Msa0552340:CDS 45.0%
!! GTAGGGGTGTTGTTTGTATC+AGG + chr4_1:48928681-48928700 Msa0552340:CDS 45.0%
!! ATGCAGGGGTGTTGTATGTT+AGG + chr4_1:48924331-48924350 Msa0552340:CDS 45.0%
!! TGCAGGGGTGTTGTATGTTA+GGG + chr4_1:48924332-48924351 Msa0552340:CDS 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:48925836-48925855 Msa0552340:intron 45.0%
ACCTTGAAAAGTTGGGGGTA+GGG - chr4_1:48929713-48929732 None:intergenic 45.0%
AACCTTGAAAAGTTGGGGGT+AGG - chr4_1:48929714-48929733 None:intergenic 45.0%
CCCAAGCATTCACAAAAGCA+TGG - chr4_1:48930871-48930890 None:intergenic 45.0%
ACCCTAATCTACACGTGATC+TGG - chr4_1:48930945-48930964 None:intergenic 45.0%
CTTATTTGTGACACACTCCC+AGG - chr4_1:48930979-48930998 None:intergenic 45.0%
TACCGTGATCCCTAGAAATG+AGG + chr4_1:48931046-48931065 Msa0552340:intron 45.0%
! GTCCTCATTTCTAGGGATCA+CGG - chr4_1:48931051-48931070 None:intergenic 45.0%
AGACAAATCAGAACAGTGGG+TGG - chr4_1:48931073-48931092 None:intergenic 45.0%
CTAAGAAGTGGAAGAGGACT+TGG - chr4_1:48931119-48931138 None:intergenic 45.0%
CCCTAACTAAGAAGTGGAAG+AGG - chr4_1:48931125-48931144 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG + chr4_1:48931241-48931260 Msa0552340:intron 45.0%
GACCGTTCAAGAATTCGAAG+AGG - chr4_1:48931343-48931362 None:intergenic 45.0%
! CACCTGAAGCTTTGTGGTAT+TGG + chr4_1:48931362-48931381 Msa0552340:CDS 45.0%
TCCCAATACCACAAAGCTTC+AGG - chr4_1:48931367-48931386 None:intergenic 45.0%
GTGAATTCAGACTCGCAAGT+GGG - chr4_1:48931420-48931439 None:intergenic 45.0%
TGTGAATTCAGACTCGCAAG+TGG - chr4_1:48931421-48931440 None:intergenic 45.0%
ACTTGCGAGTCTGAATTCAC+AGG + chr4_1:48931420-48931439 Msa0552340:CDS 45.0%
CTTGCGAGTCTGAATTCACA+GGG + chr4_1:48931421-48931440 Msa0552340:CDS 45.0%
TGCTTGGCTGACATCATCAT+GGG - chr4_1:48931448-48931467 None:intergenic 45.0%
TTGCTTGGCTGACATCATCA+TGG - chr4_1:48931449-48931468 None:intergenic 45.0%
! ATGATGATGTCAGCCAAGCA+AGG + chr4_1:48931448-48931467 Msa0552340:CDS 45.0%
! CCATGTTATGTTGTGCCGTT+AGG - chr4_1:48931527-48931546 None:intergenic 45.0%
CCTAACGGCACAACATAACA+TGG + chr4_1:48931524-48931543 Msa0552340:three_prime_UTR 45.0%
AAAGTGGTTCAAGAGCAGCA+TGG - chr4_1:48931565-48931584 None:intergenic 45.0%
GGGTACGATGATGAAGAAAC+TGG - chr4_1:48931630-48931649 None:intergenic 45.0%
AAACAGGAAGATACCAGGAG+GGG - chr4_1:48931650-48931669 None:intergenic 45.0%
! TACCGGGACTTTTGAACTGA+TGG - chr4_1:48932116-48932135 None:intergenic 45.0%
TGGCCATACCTAATTGTGAC+TGG + chr4_1:48932454-48932473 Msa0552340:intron 45.0%
GCTTGCAATGCACTGTGTTA+AGG + chr4_1:48932542-48932561 Msa0552340:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG - chr4_1:48932591-48932610 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG - chr4_1:48932592-48932611 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG + chr4_1:48932594-48932613 Msa0552340:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG + chr4_1:48932649-48932668 Msa0552340:three_prime_UTR 45.0%
AAGCGCGACATCTTTGTTAG+TGG + chr4_1:48932694-48932713 Msa0552340:three_prime_UTR 45.0%
ACATCTTTGTTAGTGGCAGC+AGG + chr4_1:48932701-48932720 Msa0552340:three_prime_UTR 45.0%
CCTCGGAACAAAATGATAGC+AGG - chr4_1:48933068-48933087 None:intergenic 45.0%
! CCTGCTATCATTTTGTTCCG+AGG + chr4_1:48933065-48933084 Msa0552340:intron 45.0%
ACAAGCAGTGCAATCCTGAT+TGG - chr4_1:48933283-48933302 None:intergenic 45.0%
AGGATTGCACTGCTTGTGTT+TGG + chr4_1:48933286-48933305 Msa0552340:intron 45.0%
TGTCTTCAAACACGACTCAC+GGG - chr4_1:48933342-48933361 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG - chr4_1:48933343-48933362 None:intergenic 45.0%
AGAAACGCACGGGTAACAAA+CGG - chr4_1:48933398-48933417 None:intergenic 45.0%
GTTCATTCTGTTTGCAGCTC+TGG + chr4_1:48933493-48933512 Msa0552340:intron 45.0%
TTCTTGGCCACACAGAACTA+CGG + chr4_1:48933619-48933638 Msa0552340:three_prime_UTR 45.0%
! TATGCAACCGTAGTTCTGTG+TGG - chr4_1:48933629-48933648 None:intergenic 45.0%
! CTTGCAAGTGCTATTGATGG+AGG - chr4_1:48933654-48933673 None:intergenic 45.0%
TTCAGCTGGCACTTCTTGAT+CGG + chr4_1:48933691-48933710 Msa0552340:three_prime_UTR 45.0%
! GATCGGGAGTTTGATGATCT+AGG + chr4_1:48933708-48933727 Msa0552340:three_prime_UTR 45.0%
ATCTCTTCCTCGGACATAGA+AGG - chr4_1:48933908-48933927 None:intergenic 45.0%
CGTCATACGGTAACATCAAG+TGG - chr4_1:48934424-48934443 None:intergenic 45.0%
TTCATTTAGTGTGGAGTGGC+AGG + chr4_1:48934489-48934508 Msa0552340:intron 45.0%
GCTCACTTGCAGTGTATGAT+TGG + chr4_1:48934598-48934617 Msa0552340:three_prime_UTR 45.0%
AAACAGACCTGAAGCAAGGA+GGG - chr4_1:48934659-48934678 None:intergenic 45.0%
! TGAGAAGAAATCTGGAGCGT+TGG + chr4_1:48934855-48934874 Msa0552340:intron 45.0%
!! GAGCGTTGGCATCTAACATA+GGG + chr4_1:48934869-48934888 Msa0552340:intron 45.0%
TGTAGATACCTGACCTTGCA+TGG + chr4_1:48935280-48935299 Msa0552340:intron 45.0%
AATTTCGGCAGTTACACCTG+AGG + chr4_1:48935930-48935949 Msa0552340:three_prime_UTR 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG + chr4_1:48935958-48935977 Msa0552340:three_prime_UTR 45.0%
GTTTCACCTACAAAGCTTCG+AGG - chr4_1:48935967-48935986 None:intergenic 45.0%
GTAGGTGAAACAGAGATTGC+CGG + chr4_1:48935976-48935995 Msa0552340:three_prime_UTR 45.0%
TTTCACAAGAGCCTCGACTT+CGG - chr4_1:48936075-48936094 None:intergenic 45.0%
CACAACAAACCCGACATTCA+CGG + chr4_1:48936137-48936156 Msa0552340:three_prime_UTR 45.0%
ACAACAAACCCGACATTCAC+GGG + chr4_1:48936138-48936157 Msa0552340:three_prime_UTR 45.0%
TAAAGACTCCCGTGAATGTC+GGG - chr4_1:48936149-48936168 None:intergenic 45.0%
CGTTCCGCTTTATCATCACT+GGG - chr4_1:48936293-48936312 None:intergenic 45.0%
CCAGTGATGATAAAGCGGAA+CGG + chr4_1:48936291-48936310 Msa0552340:three_prime_UTR 45.0%
!! ATAAAAAAATATTTAAACAT+AGG - chr4_1:48928712-48928731 None:intergenic 5.0%
!! TTTATTCATATTATAAAATA+TGG - chr4_1:48935788-48935807 None:intergenic 5.0%
TGGGTTTCCAACCTAGACCT+GGG - chr4_1:48923482-48923501 None:intergenic 50.0%
TTGGGTTTCCAACCTAGACC+TGG - chr4_1:48923483-48923502 None:intergenic 50.0%
AAGTGCAAGTCGCCAGATCT+GGG - chr4_1:48923646-48923665 None:intergenic 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:48924150-48924169 Msa0552340:intron 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:48924151-48924170 Msa0552340:intron 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:48924152-48924171 Msa0552340:intron 50.0%
TGGATCAAGGGACATGATGC+AGG + chr4_1:48924315-48924334 Msa0552340:CDS 50.0%
GGATCAAGGGACATGATGCA+GGG + chr4_1:48924316-48924335 Msa0552340:CDS 50.0%
GATCAAGGGACATGATGCAG+GGG + chr4_1:48924317-48924336 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTATGTTAC+AGG + chr4_1:48924333-48924352 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:48924150-48924169 Msa0552340:intron 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:48924151-48924170 Msa0552340:intron 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:48924152-48924171 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48925699-48925718 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48925699-48925718 Msa0552340:CDS 50.0%
! GCGGGGATGTTGTTTGTATC+AGG + chr4_1:48926200-48926219 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48925699-48925718 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG + chr4_1:48926701-48926720 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG + chr4_1:48926701-48926720 Msa0552340:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:48924003-48924022 Msa0552340:intron 50.0%
TGGATCGAGGGACAAAACCT+AGG + chr4_1:48927146-48927165 Msa0552340:intron 50.0%
GGATCGAGGGACAAAACCTA+GGG + chr4_1:48927147-48927166 Msa0552340:intron 50.0%
GATCGAGGGACAAAACCTAG+GGG + chr4_1:48927148-48927167 Msa0552340:intron 50.0%
GCCGGGGAATTGTATGTATC+AGG + chr4_1:48928175-48928194 Msa0552340:intron 50.0%
AGGGGACACATTGCATTGCA+GGG + chr4_1:48928329-48928348 Msa0552340:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:48924150-48924169 Msa0552340:intron 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:48924151-48924170 Msa0552340:intron 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:48924152-48924171 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTATGTTAG+GGG + chr4_1:48928816-48928835 Msa0552340:intron 50.0%
! GCACGGGTGTTGTATGTATC+AGG + chr4_1:48928973-48928992 Msa0552340:intron 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:48925699-48925718 Msa0552340:CDS 50.0%
! GCAGGGATGTTGTTTGTCTC+AGG + chr4_1:48929305-48929324 Msa0552340:CDS 50.0%
! ACCCTACCCCCAACTTTTCA+AGG + chr4_1:48929709-48929728 Msa0552340:intron 50.0%
GTGCATAATCGCAGATGGGA+AGG - chr4_1:48930240-48930259 None:intergenic 50.0%
GTGGGTGGTCCTCATTTCTA+GGG - chr4_1:48931058-48931077 None:intergenic 50.0%
AGTGGGTGGTCCTCATTTCT+AGG - chr4_1:48931059-48931078 None:intergenic 50.0%
CATGGGCCCTAACTAAGAAG+TGG - chr4_1:48931131-48931150 None:intergenic 50.0%
AACGGTCACCTGAAGCTTTG+TGG + chr4_1:48931356-48931375 Msa0552340:CDS 50.0%
GCTTGGCTGACATCATCATG+GGG - chr4_1:48931447-48931466 None:intergenic 50.0%
TGTCAGCCAAGCAAGGTACA+AGG + chr4_1:48931455-48931474 Msa0552340:CDS 50.0%
GTCAGCCAAGCAAGGTACAA+GGG + chr4_1:48931456-48931475 Msa0552340:CDS 50.0%
AGGTACCCTTGTACCTTGCT+TGG - chr4_1:48931464-48931483 None:intergenic 50.0%
GCCTCCATCAATCTGCCTAA+CGG + chr4_1:48931509-48931528 Msa0552340:three_prime_UTR 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG - chr4_1:48931516-48931535 None:intergenic 50.0%
! GCTTTGCAGGTTCGGGTTTA+CGG + chr4_1:48932398-48932417 Msa0552340:intron 50.0%
ACAATGCCCACATGCTGTAC+AGG + chr4_1:48932582-48932601 Msa0552340:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG + chr4_1:48933400-48933419 Msa0552340:three_prime_UTR 50.0%
TCCTACCACAAGAAACGCAC+GGG - chr4_1:48933408-48933427 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG - chr4_1:48933409-48933428 None:intergenic 50.0%
! GTAGTTCTGTGTGGCCAAGA+AGG - chr4_1:48933620-48933639 None:intergenic 50.0%
! CGGCTTGCAAGTGCTATTGA+TGG - chr4_1:48933657-48933676 None:intergenic 50.0%
TCAATAGCACTTGCAAGCCG+AGG + chr4_1:48933657-48933676 Msa0552340:three_prime_UTR 50.0%
CAATAGCACTTGCAAGCCGA+GGG + chr4_1:48933658-48933677 Msa0552340:three_prime_UTR 50.0%
TCAGCTGGCACTTCTTGATC+GGG + chr4_1:48933692-48933711 Msa0552340:three_prime_UTR 50.0%
TACTGCACCTTCTATGTCCG+AGG + chr4_1:48933898-48933917 Msa0552340:three_prime_UTR 50.0%
TCGTTTGTGGCAGAAGACAC+AGG + chr4_1:48934532-48934551 Msa0552340:intron 50.0%
GCAAGTGAGCTCATCATCAG+AGG - chr4_1:48934588-48934607 None:intergenic 50.0%
GAAACAGACCTGAAGCAAGG+AGG - chr4_1:48934660-48934679 None:intergenic 50.0%
!! GGAGCGTTGGCATCTAACAT+AGG + chr4_1:48934868-48934887 Msa0552340:intron 50.0%
! AGGCTAGTTGCATTGATCCC+TGG + chr4_1:48935554-48935573 Msa0552340:three_prime_UTR 50.0%
CGAGGCTACATACAATCCTC+AGG - chr4_1:48935949-48935968 None:intergenic 50.0%
CTATGCACTAGTCCCGTTTC+TGG - chr4_1:48936049-48936068 None:intergenic 50.0%
!! CGTGAATGTCGGGTTTGTTG+TGG - chr4_1:48936139-48936158 None:intergenic 50.0%
CCGTTCCGCTTTATCATCAC+TGG - chr4_1:48936294-48936313 None:intergenic 50.0%
GCGTGCAAGTACAGCCACTT+AGG - chr4_1:48923409-48923428 None:intergenic 55.0%
GAAGTGCAAGTCGCCAGATC+TGG - chr4_1:48923647-48923666 None:intergenic 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48925849-48925868 Msa0552340:CDS 55.0%
TGGATCGAGGGGACACATTG+CGG + chr4_1:48925847-48925866 Msa0552340:CDS 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48925849-48925868 Msa0552340:CDS 55.0%
AAGATCGAGGGACACGATGC+AGG + chr4_1:48927482-48927501 Msa0552340:CDS 55.0%
AGATCGAGGGACACGATGCA+GGG + chr4_1:48927483-48927502 Msa0552340:CDS 55.0%
AAGATCGAGGGACACGATGC+AGG + chr4_1:48927482-48927501 Msa0552340:CDS 55.0%
AGATCGAGGGACACGATGCA+GGG + chr4_1:48927483-48927502 Msa0552340:CDS 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48925849-48925868 Msa0552340:CDS 55.0%
TAGATCGAGGGACACGATGC+CGG + chr4_1:48928157-48928176 Msa0552340:intron 55.0%
GAGGGGACACATTGCATTGC+AGG + chr4_1:48928328-48928347 Msa0552340:intron 55.0%
TAGATCGAGGGACACGATGC+AGG + chr4_1:48928157-48928176 Msa0552340:intron 55.0%
AGATCGAGGGACACGATGCA+GGG + chr4_1:48927483-48927502 Msa0552340:CDS 55.0%
TGGATCAAGGGACACGATGC+AGG + chr4_1:48928798-48928817 Msa0552340:intron 55.0%
GGATCAAGGGACACGATGCA+GGG + chr4_1:48928799-48928818 Msa0552340:intron 55.0%
GATCAAGGGACACGATGCAG+GGG + chr4_1:48928800-48928819 Msa0552340:intron 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:48925849-48925868 Msa0552340:CDS 55.0%
! ATGGAAAGGCGGCAAGTTGG+AGG - chr4_1:48929849-48929868 None:intergenic 55.0%
CAGATGGAAAGGCGGCAAGT+TGG - chr4_1:48929852-48929871 None:intergenic 55.0%
GCCGTTAGGCAGATTGATGG+AGG - chr4_1:48931513-48931532 None:intergenic 55.0%
CTTCATCATCGTACCCCTCC+TGG + chr4_1:48931634-48931653 Msa0552340:intron 55.0%
GCCCACATGCTGTACAGGTT+AGG + chr4_1:48932587-48932606 Msa0552340:intron 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG + chr4_1:48933404-48933423 Msa0552340:intron 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG + chr4_1:48933407-48933426 Msa0552340:intron 55.0%
! TTGCAGCTCTGGCTAGTGCT+TGG + chr4_1:48933504-48933523 Msa0552340:intron 55.0%
! TAGCTTGCCCTCCTTGCTTC+AGG + chr4_1:48934649-48934668 Msa0552340:three_prime_UTR 55.0%
! GTTGCATTGATCCCTGGCTG+CGG + chr4_1:48935560-48935579 Msa0552340:three_prime_UTR 55.0%
CTGCGGCAACAAGGGATTTG+CGG + chr4_1:48935577-48935596 Msa0552340:three_prime_UTR 55.0%
GTGCATAGAAGCCGAAGTCG+AGG + chr4_1:48936061-48936080 Msa0552340:three_prime_UTR 55.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48923827-48923846 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48923827-48923846 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48923827-48923846 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48925848-48925867 Msa0552340:CDS 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48923827-48923846 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGGACACATTGC+GGG + chr4_1:48925848-48925867 Msa0552340:CDS 60.0%
GATCGAGGGGACACATTGCG+GGG + chr4_1:48926183-48926202 Msa0552340:CDS 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:48923827-48923846 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48925848-48925867 Msa0552340:CDS 60.0%
TGGATCGTGGGACACGATGC+AGG + chr4_1:48926683-48926702 Msa0552340:CDS 60.0%
GGATCGTGGGACACGATGCA+GGG + chr4_1:48926684-48926703 Msa0552340:CDS 60.0%
GATCGTGGGACACGATGCAG+GGG + chr4_1:48926685-48926704 Msa0552340:CDS 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GAACGAGGGGACGCATTGCA+GGG + chr4_1:48927313-48927332 Msa0552340:intron 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GAACGAGGGGACGCATTGCA+GGG + chr4_1:48927313-48927332 Msa0552340:intron 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48925848-48925867 Msa0552340:CDS 60.0%
AGATCGAGGGACACGATGCC+GGG + chr4_1:48928158-48928177 Msa0552340:intron 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:48923829-48923848 Msa0552340:exon 60.0%
GGATCGAGGGACACGATGCA+CGG + chr4_1:48923828-48923847 Msa0552340:exon 60.0%
GATCGAGGGACACGATGCAC+GGG + chr4_1:48928957-48928976 Msa0552340:intron 60.0%
TGGATCCAGGGACACGATGC+AGG + chr4_1:48929120-48929139 Msa0552340:intron 60.0%
GGATCCAGGGACACGATGCA+GGG + chr4_1:48929121-48929140 Msa0552340:intron 60.0%
GATCCAGGGACACGATGCAG+GGG + chr4_1:48929122-48929141 Msa0552340:intron 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:48925848-48925867 Msa0552340:CDS 60.0%
GGCTGCTGCTGCATGAGCTT+GGG - chr4_1:48933592-48933611 None:intergenic 60.0%
TGGCTGCTGCTGCATGAGCT+TGG - chr4_1:48933593-48933612 None:intergenic 60.0%
TGTGTGGCCAAGAAGGCCAC+TGG - chr4_1:48933613-48933632 None:intergenic 60.0%
! GCTGAAGTCTGAGACGCCCT+CGG - chr4_1:48933677-48933696 None:intergenic 60.0%
! AGGGCGTCTCAGACTTCAGC+TGG + chr4_1:48933677-48933696 Msa0552340:three_prime_UTR 60.0%
GGCACACACCATGCAAGGTC+AGG - chr4_1:48935291-48935310 None:intergenic 60.0%
ATCCCTGGCTGCGGCAACAA+GGG + chr4_1:48935569-48935588 Msa0552340:three_prime_UTR 60.0%
ATCCCTTGTTGCCGCAGCCA+GGG - chr4_1:48935574-48935593 None:intergenic 60.0%
AATCCCTTGTTGCCGCAGCC+AGG - chr4_1:48935575-48935594 None:intergenic 60.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:48924465-48924484 Msa0552340:intron 65.0%
GGAACGAGGGGACGCATTGC+AGG + chr4_1:48927312-48927331 Msa0552340:intron 65.0%
GGAACGAGGGGACGCATTGC+AGG + chr4_1:48927312-48927331 Msa0552340:intron 65.0%
GATCGAGGGACACGATGCCG+GGG + chr4_1:48928159-48928178 Msa0552340:intron 65.0%
ACACCCCTGCATCGTGTCCC+TGG - chr4_1:48923993-48924012 None:intergenic 65.0%
GCTCATGCAGCAGCAGCCAG+TGG + chr4_1:48933594-48933613 Msa0552340:three_prime_UTR 65.0%
GCAGCAGCCAGTGGCCTTCT+TGG + chr4_1:48933603-48933622 Msa0552340:three_prime_UTR 65.0%
! GGGGAGGCACACACCATGCA+AGG - chr4_1:48935296-48935315 None:intergenic 65.0%
GATCCCTGGCTGCGGCAACA+AGG + chr4_1:48935568-48935587 Msa0552340:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 48923268 48936424 48923268 ID=Msa0552340;Name=Msa0552340
chr4_1 mRNA 48923268 48936424 48923268 ID=Msa0552340-mRNA-1;Parent=Msa0552340;Name=Msa0552340-mRNA-1;_AED=0.30;_eAED=0.30;_QI=304|0.66|0.96|1|0.58|0.8|25|1648|290
chr4_1 exon 48923268 48923552 48923268 ID=Msa0552340-mRNA-1:exon:13475;Parent=Msa0552340-mRNA-1
chr4_1 exon 48923824 48923866 48923824 ID=Msa0552340-mRNA-1:exon:13476;Parent=Msa0552340-mRNA-1
chr4_1 exon 48924312 48924354 48924312 ID=Msa0552340-mRNA-1:exon:13477;Parent=Msa0552340-mRNA-1
chr4_1 exon 48925513 48925555 48925513 ID=Msa0552340-mRNA-1:exon:13478;Parent=Msa0552340-mRNA-1
chr4_1 exon 48925678 48925720 48925678 ID=Msa0552340-mRNA-1:exon:13479;Parent=Msa0552340-mRNA-1
chr4_1 exon 48925844 48925887 48925844 ID=Msa0552340-mRNA-1:exon:13480;Parent=Msa0552340-mRNA-1
chr4_1 exon 48926012 48926054 48926012 ID=Msa0552340-mRNA-1:exon:13481;Parent=Msa0552340-mRNA-1
chr4_1 exon 48926178 48926221 48926178 ID=Msa0552340-mRNA-1:exon:13482;Parent=Msa0552340-mRNA-1
chr4_1 exon 48926346 48926388 48926346 ID=Msa0552340-mRNA-1:exon:13483;Parent=Msa0552340-mRNA-1
chr4_1 exon 48926512 48926555 48926512 ID=Msa0552340-mRNA-1:exon:13484;Parent=Msa0552340-mRNA-1
chr4_1 exon 48926680 48926722 48926680 ID=Msa0552340-mRNA-1:exon:13485;Parent=Msa0552340-mRNA-1
chr4_1 exon 48927479 48927521 48927479 ID=Msa0552340-mRNA-1:exon:13486;Parent=Msa0552340-mRNA-1
chr4_1 exon 48927646 48927689 48927646 ID=Msa0552340-mRNA-1:exon:13487;Parent=Msa0552340-mRNA-1
chr4_1 exon 48927817 48927859 48927817 ID=Msa0552340-mRNA-1:exon:13488;Parent=Msa0552340-mRNA-1
chr4_1 exon 48927984 48928027 48927984 ID=Msa0552340-mRNA-1:exon:13489;Parent=Msa0552340-mRNA-1
chr4_1 exon 48928501 48928537 48928501 ID=Msa0552340-mRNA-1:exon:13490;Parent=Msa0552340-mRNA-1
chr4_1 exon 48928660 48928702 48928660 ID=Msa0552340-mRNA-1:exon:13491;Parent=Msa0552340-mRNA-1
chr4_1 exon 48929283 48929326 48929283 ID=Msa0552340-mRNA-1:exon:13492;Parent=Msa0552340-mRNA-1
chr4_1 exon 48931326 48931545 48931326 ID=Msa0552340-mRNA-1:exon:13493;Parent=Msa0552340-mRNA-1
chr4_1 exon 48932604 48932722 48932604 ID=Msa0552340-mRNA-1:exon:13494;Parent=Msa0552340-mRNA-1
chr4_1 exon 48933288 48933421 48933288 ID=Msa0552340-mRNA-1:exon:13495;Parent=Msa0552340-mRNA-1
chr4_1 exon 48933510 48933729 48933510 ID=Msa0552340-mRNA-1:exon:13496;Parent=Msa0552340-mRNA-1
chr4_1 exon 48933858 48933972 48933858 ID=Msa0552340-mRNA-1:exon:13497;Parent=Msa0552340-mRNA-1
chr4_1 exon 48934545 48934670 48934545 ID=Msa0552340-mRNA-1:exon:13498;Parent=Msa0552340-mRNA-1
chr4_1 exon 48935550 48936424 48935550 ID=Msa0552340-mRNA-1:exon:13499;Parent=Msa0552340-mRNA-1
chr4_1 five_prime_UTR 48923268 48923552 48923268 ID=Msa0552340-mRNA-1:five_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 five_prime_UTR 48923824 48923842 48923824 ID=Msa0552340-mRNA-1:five_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48923843 48923866 48923843 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48924312 48924354 48924312 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48925513 48925555 48925513 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48925678 48925720 48925678 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48925844 48925887 48925844 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48926012 48926054 48926012 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48926178 48926221 48926178 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48926346 48926388 48926346 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48926512 48926555 48926512 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48926680 48926722 48926680 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48927479 48927521 48927479 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48927646 48927689 48927646 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48927817 48927859 48927817 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48927984 48928027 48927984 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48928501 48928537 48928501 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48928660 48928702 48928660 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48929283 48929326 48929283 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 CDS 48931326 48931486 48931326 ID=Msa0552340-mRNA-1:cds;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48931487 48931545 48931487 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48932604 48932722 48932604 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48933288 48933421 48933288 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48933510 48933729 48933510 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48933858 48933972 48933858 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48934545 48934670 48934545 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
chr4_1 three_prime_UTR 48935550 48936424 48935550 ID=Msa0552340-mRNA-1:three_prime_utr;Parent=Msa0552340-mRNA-1
Gene Sequence

>Msa0552340

ATGCAGGGATGTTGTTTGTATCAGTTCTGGATCAAGGGACATGATGCAGGGGTGTTGTATGTTACAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTTTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCGGGGATGTTGTTTGTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTATCAGTTCTGGATCGTGGGACACGATGCAGGGGTGTTGTATGAATCAGTTCAAGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGTTCTGGAACGAGGGGACGCATTGCAGGGATGTTGTTTGTATCAGTTCAAGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGTTATGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTATCAGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTCTCAGCACTGAAGTTATTGCCTCTTCGAATTCTTGAACGGTCACCTGAAGCTTTGTGGTATTGGGAAGCTGCATATTTTCACAATCGTAGAATACTCCCACTTGCGAGTCTGAATTCACAGGGCCCCATGATGATGTCAGCCAAGCAAGGTACAAGGGTACCTTGA
Protein sequence

>Msa0552340

MQGCCLYQFWIKGHDAGVLYVTVLDRGTKRRGVVFISSGSRDTMQGCCLYQVWIEGTHCRDVVCISSGSRDTMQGCCLYQVWIEGTHCGDVVCISSGSRDTMQGCCLYQVWIEGTHCRDVVCISSGSWDTMQGCCMNQFKIEGHDAGELYVSVLERGDALQGCCLYQFKIEGHDAGELYVSVMDRGDTLQGCCLYQIEGHDAGELYVSVLDRGTKRRGVVCIRSGSRGHIAGMLFVSALKLLPLRILERSPEALWYWEAAYFHNRRILPLASLNSQGPMMMSAKQGTRVP*