AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0552440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552440 MtrunA17_Chr3g0112041 91.057 123 8 1 560 679 61 183 1.61e-56 194
Msa0552440 MtrunA17_Chr4g0031921 60.938 128 42 3 549 673 51 173 1.97e-34 132
Msa0552440 MtrunA17_Chr4g0031911 59.375 128 44 3 549 673 51 173 3.88e-32 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0552440 AT3G55530.1 84.615 117 14 2 560 673 62 177 1.13e-46 167

Find 241 sgRNAs with CRISPR-Local

Find 802 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTCATATTATAAAATA+TGG 0.209225 4_1:-49080032 None:intergenic
GCAGCAGCCAGTGGCCTTCT+TGG 0.225465 4_1:+49077851 Msa0552440:CDS
GGCTGCTGCTGCATGAGCTT+GGG 0.225768 4_1:-49077837 None:intergenic
CTATGCACTAGTCCCGTTTC+TGG 0.229114 4_1:-49080293 None:intergenic
TGGCTGCTGCTGCATGAGCT+TGG 0.233454 4_1:-49077838 None:intergenic
GTCCACAAATACAAGGTTTC+TGG 0.243519 4_1:+49078188 Msa0552440:CDS
ATTAAAACTTTCCACAAGTT+TGG 0.270086 4_1:-49079950 None:intergenic
TATTCCGAATTTCATAGTTC+TGG 0.273830 4_1:+49068722 Msa0552440:CDS
ACCTGAAGCTTTGTGGTATT+GGG 0.289083 4_1:+49075611 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+49070159 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+49070791 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+49071125 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+49071462 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.292410 4_1:+49071803 Msa0552440:CDS
CCGTTCCGCTTTATCATCAC+TGG 0.294393 4_1:-49080538 None:intergenic
TATGGTTGTAGATTATGTTT+TGG 0.299380 4_1:+49080009 Msa0552440:three_prime_UTR
CACCTGAAGCTTTGTGGTAT+TGG 0.307162 4_1:+49075610 Msa0552440:CDS
TAGCTTGCCCTCCTTGCTTC+AGG 0.316481 4_1:+49078896 Msa0552440:CDS
CTAGGGGTGTTGTTTGTATC+AGG 0.316792 4_1:+49070625 Msa0552440:CDS
GCAGGGATGTTGTTTGTATC+AGG 0.335179 4_1:+49068437 Msa0552440:CDS
AGAAAATTATAACATTTATT+CGG 0.335338 4_1:+49072249 Msa0552440:intron
GTAGGGGTGTTGTTTGTATC+AGG 0.344140 4_1:+49072452 Msa0552440:CDS
GTAGGGGTGTTGTTTGTATC+AGG 0.344140 4_1:+49072930 Msa0552440:CDS
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+49069992 Msa0552440:CDS
GCAGGGGTGTTGTTTGTATC+AGG 0.351233 4_1:+49073387 Msa0552440:CDS
AGAAAATTATAACATTTATT+CGG 0.351761 4_1:+49069633 Msa0552440:CDS
AAATACCTTCAATGCAATTT+CGG 0.353076 4_1:+49080162 Msa0552440:three_prime_UTR
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+49070960 Msa0552440:CDS
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+49071294 Msa0552440:CDS
GCAGGGGAATTGTATGTATC+AGG 0.358223 4_1:+49071973 Msa0552440:CDS
GGAACAAATTATAAGGCTTC+CGG 0.358326 4_1:-49080242 None:intergenic
ATGTTAAGGAACAAATTATA+AGG 0.359162 4_1:-49080249 None:intergenic
GGATCGAGGGGACGCATTGC+AGG 0.362841 4_1:+49070773 Msa0552440:CDS
TCCCAATACCACAAAGCTTC+AGG 0.364461 4_1:-49075612 None:intergenic
AGAAAATTATAACATTTATT+CGG 0.366799 4_1:+49072727 Msa0552440:intron
AATTCGGAATAAATGTTAAC+AGG 0.367199 4_1:-49069777 None:intergenic
TTATGAAACTTTAAGAGCTC+TGG 0.370204 4_1:+49078106 Msa0552440:CDS
GAGGGGACACATTGCATTGC+AGG 0.371812 4_1:+49071785 Msa0552440:CDS
CGGTTCGAGGGACACGATAC+AGG 0.372624 4_1:+49072747 Msa0552440:CDS
ACAGGGGTGTTGTATGTATC+AGG 0.375367 4_1:+49072765 Msa0552440:CDS
GGAACGAGGGGACGCATTGC+AGG 0.377245 4_1:+49071107 Msa0552440:CDS
GCACGGGTGTTGTATGTATC+AGG 0.378032 4_1:+49073222 Msa0552440:CDS
ATGTAGCCTCGAAGCTTTGT+AGG 0.380636 4_1:+49080205 Msa0552440:three_prime_UTR
GCAGGGGTGTTGTATGTATC+AGG 0.381683 4_1:+49069671 Msa0552440:CDS
GCAGGGGTGTTGTATGTATC+AGG 0.381683 4_1:+49070460 Msa0552440:CDS
GCAGGGGTGTTGTATGTATC+AGG 0.381683 4_1:+49072287 Msa0552440:CDS
TGTTTGGAGACTTCCAGATA+TGG 0.383401 4_1:+49077550 Msa0552440:CDS
ATCTCTTCCTCGGACATAGA+AGG 0.384845 4_1:-49078152 None:intergenic
GCAGGGATGTTGTTTGTCTC+AGG 0.388069 4_1:+49073554 Msa0552440:CDS
TGTCTTTCAAACCCAGGTCT+AGG 0.389680 4_1:+49068060 Msa0552440:five_prime_UTR
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+49070141 Msa0552440:CDS
GGATCGAGGGGACACATTGC+AGG 0.398883 4_1:+49073536 Msa0552440:CDS
GGATCGAGGGGACACATTGC+AGG 0.399391 4_1:+49071444 Msa0552440:CDS
CGATCCAGAACTATGAAATT+CGG 0.400422 4_1:-49068726 None:intergenic
CGATCTGGTTCTTCAAAAGA+AGG 0.400490 4_1:-49068122 None:intergenic
TAGCCACGTTTACAATGTTA+AGG 0.401215 4_1:-49080263 None:intergenic
CGATCCAGAACTACAAAATT+CGG 0.401279 4_1:-49069793 None:intergenic
CGATCCAGAACTACAAAATT+CGG 0.401279 4_1:-49070591 None:intergenic
TAAAAGTTTAAAATTGAAAC+AGG 0.402809 4_1:-49079988 None:intergenic
GGATCCAGAACTACAAAATT+CGG 0.406448 4_1:-49073353 None:intergenic
CTGCGGCAACAAGGGATTTG+CGG 0.412826 4_1:+49079824 Msa0552440:CDS
ACGGGAGTCTTTAAGTCATA+AGG 0.413942 4_1:+49080403 Msa0552440:three_prime_UTR
AGGATTGCACTGCTTGTGTT+TGG 0.414613 4_1:+49077534 Msa0552440:intron
TGCTTGGCTGACATCATCAT+GGG 0.416444 4_1:-49075693 None:intergenic
AATCCCTTGTTGCCGCAGCC+AGG 0.416854 4_1:-49079819 None:intergenic
GCAGGGGTGTTGTATGTTAC+AGG 0.417903 4_1:+49068925 Msa0552440:CDS
CATCAGATATAGCCCATATC+TGG 0.418485 4_1:-49077563 None:intergenic
GTGCGAAATTGCAGACAGAT+TGG 0.419355 4_1:-49068091 None:intergenic
TGCTGTACAGGTTAGGTTGT+TGG 0.423397 4_1:+49076842 Msa0552440:intron
TGGATCCAGGGACACGATGC+AGG 0.427684 4_1:+49073369 Msa0552440:CDS
TGGATCAAGGGACACGATGC+AGG 0.429703 4_1:+49073047 Msa0552440:CDS
TTGAATGTTTATTTAAGGTA+TGG 0.430611 4_1:-49080586 None:intergenic
TCAGAAGGTAGAAGTTGTAT+TGG 0.431779 4_1:+49076867 Msa0552440:CDS
AACTGCCGAAATTGCATTGA+AGG 0.433351 4_1:-49080167 None:intergenic
AACGGTCACCTGAAGCTTTG+TGG 0.436580 4_1:+49075604 Msa0552440:CDS
AATAAAGAAGATTACCGATC+TGG 0.441308 4_1:-49068137 None:intergenic
GCAGGGGTGTTGTATGAATC+AGG 0.443379 4_1:+49070325 Msa0552440:CDS
GCAGGGGTGTTGTATGAATC+AGG 0.443379 4_1:+49072617 Msa0552440:CDS
AACTTTAAGAGCTCTGGATT+CGG 0.443410 4_1:+49078112 Msa0552440:CDS
TTCAGCTGGCACTTCTTGAT+CGG 0.445031 4_1:+49077939 Msa0552440:CDS
GTAGGTGAAACAGAGATTGC+CGG 0.446732 4_1:+49080223 Msa0552440:three_prime_UTR
GCAGGGGTGTTGTATGTTAG+AGG 0.450711 4_1:+49073065 Msa0552440:CDS
TGCGAAATTGCAGACAGATT+GGG 0.452742 4_1:-49068090 None:intergenic
AGGTACCCTTGTACCTTGCT+TGG 0.453384 4_1:-49075709 None:intergenic
TAAAGACTCCCGTGAATGTC+GGG 0.455030 4_1:-49080393 None:intergenic
TGGATCAAGGGACATGATGC+AGG 0.456519 4_1:+49068907 Msa0552440:CDS
TTATAACATTTACACGATGC+AGG 0.457652 4_1:+49070442 Msa0552440:CDS
GGCTAATTCTATCCAGAAAC+GGG 0.458178 4_1:+49080281 Msa0552440:three_prime_UTR
CGGCTTGCAAGTGCTATTGA+TGG 0.461962 4_1:-49077902 None:intergenic
TCAGCTGGCACTTCTTGATC+GGG 0.463787 4_1:+49077940 Msa0552440:CDS
CGTTCCGCTTTATCATCACT+GGG 0.465347 4_1:-49080537 None:intergenic
GACCAGAAACCTTGTATTTG+TGG 0.466017 4_1:-49078190 None:intergenic
ACACCCCTGCATCGTGTCCC+TGG 0.466443 4_1:-49073374 None:intergenic
TGGATCGAGGGACACGATGC+AGG 0.467043 4_1:+49068419 Msa0552440:exon
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+49069974 Msa0552440:CDS
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+49070307 Msa0552440:CDS
TGGATCGAGGGACACGATGC+AGG 0.467916 4_1:+49072599 Msa0552440:CDS
GTTTGGAGACTTCCAGATAT+GGG 0.469760 4_1:+49077551 Msa0552440:CDS
TGGATCGAGGGACACGATGC+AGG 0.469936 4_1:+49070942 Msa0552440:CDS
AAGATCGAGGGACACGATGC+AGG 0.469936 4_1:+49071276 Msa0552440:CDS
TAGATCGAGGGACACGATGC+AGG 0.474673 4_1:+49071955 Msa0552440:CDS
TTGCTTGGCTGACATCATCA+TGG 0.474830 4_1:-49075694 None:intergenic
GCTCACTTGCAGTGTATGAT+TGG 0.478221 4_1:+49078845 Msa0552440:CDS
AGAAAATAATAATCTATCGT+TGG 0.482734 4_1:+49067929 Msa0552440:five_prime_UTR
GATCGGGAGTTTGATGATCT+AGG 0.485183 4_1:+49077956 Msa0552440:CDS
TTCATTCTGTGATACGCACT+TGG 0.486224 4_1:-49080073 None:intergenic
TTGCAGCTCTGGCTAGTGCT+TGG 0.489119 4_1:+49077752 Msa0552440:intron
TCGTGTTTGAAGACACTTGA+AGG 0.493320 4_1:+49077595 Msa0552440:CDS
AGGCTAGTTGCATTGATCCC+TGG 0.497142 4_1:+49079801 Msa0552440:CDS
AGGGCGTCTCAGACTTCAGC+TGG 0.499276 4_1:+49077925 Msa0552440:CDS
CGGATCGAGGGACACGATGC+AGG 0.500527 4_1:+49069653 Msa0552440:CDS
CGGATCGAGGGACACGATGC+AGG 0.500527 4_1:+49072269 Msa0552440:CDS
TGGCTAATTCTATCCAGAAA+CGG 0.509071 4_1:+49080280 Msa0552440:three_prime_UTR
ATCCCTTGTTGCCGCAGCCA+GGG 0.509449 4_1:-49079818 None:intergenic
TGATTGGAGCAAGTTTATGT+TGG 0.509867 4_1:+49078861 Msa0552440:CDS
TCTTGATGGCTACAATGCTA+AGG 0.511885 4_1:+49077780 Msa0552440:CDS
GCGTGCAAGTACAGCCACTT+AGG 0.514350 4_1:-49067998 None:intergenic
TATAACATTTATTCGGTTCG+AGG 0.517127 4_1:+49072734 Msa0552440:CDS
TTTCAAACCCAGGTCTAGGT+TGG 0.518913 4_1:+49068064 Msa0552440:five_prime_UTR
TGGCATTGAATGCTATCAAA+AGG 0.520255 4_1:-49080566 None:intergenic
GAAACCTTGTATTTGTGGAC+AGG 0.524408 4_1:-49078185 None:intergenic
CGAGGCTACATACAATCCTC+AGG 0.524500 4_1:-49080193 None:intergenic
CAGGATAATTCAAATGCGGT+TGG 0.526813 4_1:+49078798 Msa0552440:CDS
AAGAGCATTTATCTCTTCCT+CGG 0.528824 4_1:-49078162 None:intergenic
TTGGGTTTCCAACCTAGACC+TGG 0.529232 4_1:-49068072 None:intergenic
GCTCATGCAGCAGCAGCCAG+TGG 0.529345 4_1:+49077842 Msa0552440:CDS
GTTTCACCTACAAAGCTTCG+AGG 0.531446 4_1:-49080211 None:intergenic
TGTGTGGCCAAGAAGGCCAC+TGG 0.533669 4_1:-49077858 None:intergenic
CGTGAATGTCGGGTTTGTTG+TGG 0.535944 4_1:-49080383 None:intergenic
TGTCAGCCAAGCAAGGTACA+AGG 0.535950 4_1:+49075703 Msa0552440:CDS
GTGTCTTCAAACACGACTCA+CGG 0.536372 4_1:-49077588 None:intergenic
CATTTATTAATCCAAACTTG+TGG 0.537070 4_1:+49079939 Msa0552440:three_prime_UTR
GTTGTTTGTCTTTCAAACCC+AGG 0.537316 4_1:+49068054 Msa0552440:five_prime_UTR
TATAACATTTACACGATGCA+GGG 0.538658 4_1:+49070443 Msa0552440:CDS
ATCCCTGGCTGCGGCAACAA+GGG 0.539645 4_1:+49079816 Msa0552440:CDS
ACAACAAACCCGACATTCAC+GGG 0.539924 4_1:+49080385 Msa0552440:three_prime_UTR
TCGTTTGTGGCAGAAGACAC+AGG 0.541361 4_1:+49078779 Msa0552440:intron
CACAACAAACCCGACATTCA+CGG 0.543492 4_1:+49080384 Msa0552440:three_prime_UTR
GATCCCTGGCTGCGGCAACA+AGG 0.547198 4_1:+49079815 Msa0552440:CDS
TCTTCCTGTCCACAAATACA+AGG 0.550485 4_1:+49078181 Msa0552440:CDS
CAGATATGGGCTATATCTGA+TGG 0.553081 4_1:+49077564 Msa0552440:CDS
TGTTACCCGTGCGTTTCTTG+TGG 0.553708 4_1:+49077648 Msa0552440:CDS
ATAACATTTATTCGGTTCGA+GGG 0.554262 4_1:+49072735 Msa0552440:CDS
TGCCTCTTCGAATTCTTGAA+CGG 0.557552 4_1:+49075586 Msa0552440:CDS
ATAACATTTATTCGGATCGA+GGG 0.558498 4_1:+49069641 Msa0552440:CDS
ATAACATTTATTCGGATCGA+GGG 0.558498 4_1:+49072257 Msa0552440:CDS
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+49070142 Msa0552440:CDS
GATCGAGGGGACACATTGCA+GGG 0.559933 4_1:+49073537 Msa0552440:CDS
TTCTTGGCCACACAGAACTA+CGG 0.560332 4_1:+49077867 Msa0552440:CDS
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+49068743 Msa0552440:CDS
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+49069810 Msa0552440:CDS
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+49072435 Msa0552440:CDS
GGATCGAGGGACAAAACGTA+GGG 0.561022 4_1:+49072913 Msa0552440:CDS
TTTCACAAGAGCCTCGACTT+CGG 0.561783 4_1:-49080319 None:intergenic
GATCGAGGGGACGCATTGCA+GGG 0.563633 4_1:+49070774 Msa0552440:CDS
GGATCGAGGGACAAAACCTA+GGG 0.564009 4_1:+49070608 Msa0552440:CDS
GGTAGAAGTTGTATTGGAGT+CGG 0.564071 4_1:+49076873 Msa0552440:CDS
GATCGAGGGGACACATTGCA+GGG 0.564670 4_1:+49071445 Msa0552440:CDS
AGATCGAGGGACACGATGCA+GGG 0.567214 4_1:+49071277 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+49069975 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+49070308 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.569592 4_1:+49072600 Msa0552440:CDS
CAAAAGAACTTGCAATTAAG+CGG 0.569807 4_1:-49080512 None:intergenic
TATAACATTTATTCGGATCG+AGG 0.571512 4_1:+49069640 Msa0552440:CDS
TATAACATTTATTCGGATCG+AGG 0.571512 4_1:+49072256 Msa0552440:CDS
AAACAGACCTGAAGCAAGGA+GGG 0.572290 4_1:-49078903 None:intergenic
TGGATCGAGGGACAAAACCT+AGG 0.573601 4_1:+49070607 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.573641 4_1:+49070943 Msa0552440:CDS
GGATCCAGGGACACGATGCA+GGG 0.574165 4_1:+49073370 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.575783 4_1:+49069654 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.575783 4_1:+49072270 Msa0552440:CDS
GGATCAAGGGACACGATGCA+GGG 0.576185 4_1:+49073048 Msa0552440:CDS
GTTAGGTTGTTGGAATCAGA+AGG 0.577503 4_1:+49076852 Msa0552440:CDS
AGATCGAGGGACACGATGCA+GGG 0.578378 4_1:+49071956 Msa0552440:CDS
CAATAGCACTTGCAAGCCGA+GGG 0.579957 4_1:+49077906 Msa0552440:CDS
ACTTGCGAGTCTGAATTCAC+AGG 0.580218 4_1:+49075668 Msa0552440:CDS
GATCGAGGGACACGATGCAC+GGG 0.580715 4_1:+49073206 Msa0552440:CDS
TGTCTTCAAACACGACTCAC+GGG 0.581712 4_1:-49077587 None:intergenic
TCAATAGCACTTGCAAGCCG+AGG 0.581721 4_1:+49077905 Msa0552440:CDS
TGGGTTTCCAACCTAGACCT+GGG 0.581878 4_1:-49068071 None:intergenic
TTAAAGACTCCCGTGAATGT+CGG 0.582049 4_1:-49080394 None:intergenic
AGAAACGCACGGGTAACAAA+CGG 0.583364 4_1:-49077643 None:intergenic
GGTTCGAGGGACACGATACA+GGG 0.584816 4_1:+49072748 Msa0552440:CDS
AGGGGACACATTGCATTGCA+GGG 0.585514 4_1:+49071786 Msa0552440:CDS
CTGATACAAACAACACCCCT+AGG 0.586109 4_1:-49070624 None:intergenic
GCTGAAGTCTGAGACGCCCT+CGG 0.586735 4_1:-49077922 None:intergenic
GAACGAGGGGACGCATTGCA+GGG 0.588553 4_1:+49071108 Msa0552440:CDS
ATTTCATAGTTCTGGATCGA+GGG 0.589226 4_1:+49068730 Msa0552440:CDS
TACTGCACCTTCTATGTCCG+AGG 0.589699 4_1:+49078145 Msa0552440:CDS
CGCAACACAACATAACTAAG+TGG 0.592443 4_1:+49068020 Msa0552440:five_prime_UTR
CGTGTTTGAAGACACTTGAA+GGG 0.593182 4_1:+49077596 Msa0552440:CDS
GGATCAAGGGACATGATGCA+GGG 0.595399 4_1:+49068908 Msa0552440:CDS
GGATCGAGGGACACGATGCA+CGG 0.598901 4_1:+49073205 Msa0552440:CDS
GTTGCATTGATCCCTGGCTG+CGG 0.599433 4_1:+49079807 Msa0552440:CDS
GGATCGAGGGACACGATGCA+GGG 0.601952 4_1:+49068420 Msa0552440:exon
TGAACCCAGTGATGATAAAG+CGG 0.607976 4_1:+49080533 Msa0552440:three_prime_UTR
CTTGCAAGTGCTATTGATGG+AGG 0.610782 4_1:-49077899 None:intergenic
CTTGCGAGTCTGAATTCACA+GGG 0.614185 4_1:+49075669 Msa0552440:CDS
AAATACATAATTGAGCGCAA+TGG 0.614605 4_1:-49080346 None:intergenic
GCAAGTGAGCTCATCATCAG+AGG 0.615069 4_1:-49078832 None:intergenic
GCTTGGCTGACATCATCATG+GGG 0.617695 4_1:-49075692 None:intergenic
TCCTACCACAAGAAACGCAC+GGG 0.620429 4_1:-49077653 None:intergenic
GTAGTTCTGTGTGGCCAAGA+AGG 0.622680 4_1:-49077865 None:intergenic
GATCCAGGGACACGATGCAG+GGG 0.623000 4_1:+49073371 Msa0552440:CDS
CGATCCAGAACTACAAAATG+CGG 0.631710 4_1:-49073188 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+49069976 Msa0552440:CDS
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+49070309 Msa0552440:CDS
GATCGAGGGACACGATGCAG+GGG 0.632473 4_1:+49072601 Msa0552440:CDS
GTGCATAGAAGCCGAAGTCG+AGG 0.634827 4_1:+49080308 Msa0552440:three_prime_UTR
AATTTCATAGTTCTGGATCG+AGG 0.637639 4_1:+49068729 Msa0552440:CDS
GTCAGCCAAGCAAGGTACAA+GGG 0.642769 4_1:+49075704 Msa0552440:CDS
ATGATGATGTCAGCCAAGCA+AGG 0.643183 4_1:+49075696 Msa0552440:CDS
AATGAAACAGACCTGAAGCA+AGG 0.644664 4_1:-49078907 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.645320 4_1:+49071278 Msa0552440:CDS
CTCCTACCACAAGAAACGCA+CGG 0.646206 4_1:-49077654 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.652045 4_1:+49070944 Msa0552440:CDS
GTGAATTCAGACTCGCAAGT+GGG 0.653816 4_1:-49075665 None:intergenic
GATCAAGGGACACGATGCAG+GGG 0.655314 4_1:+49073049 Msa0552440:CDS
GTTCCTTAACATTGTAAACG+TGG 0.656496 4_1:+49080260 Msa0552440:three_prime_UTR
GATCGAGGGACACGATGCAG+GGG 0.658760 4_1:+49069655 Msa0552440:CDS
GATCGAGGGACACGATGCAG+GGG 0.658760 4_1:+49072271 Msa0552440:CDS
TGTGAATTCAGACTCGCAAG+TGG 0.664881 4_1:-49075666 None:intergenic
GATCGAGGGACACGATGCAG+GGG 0.665111 4_1:+49071957 Msa0552440:CDS
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+49068742 Msa0552440:CDS
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+49069809 Msa0552440:CDS
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+49072434 Msa0552440:CDS
TGGATCGAGGGACAAAACGT+AGG 0.665605 4_1:+49072912 Msa0552440:CDS
ATAACATTTACACGATGCAG+GGG 0.665898 4_1:+49070444 Msa0552440:CDS
GACACAGGATAATTCAAATG+CGG 0.672978 4_1:+49078794 Msa0552440:CDS
GATCAAGGGACATGATGCAG+GGG 0.677215 4_1:+49068909 Msa0552440:CDS
GAAACAGACCTGAAGCAAGG+AGG 0.677621 4_1:-49078904 None:intergenic
AATTTCGGCAGTTACACCTG+AGG 0.678139 4_1:+49080177 Msa0552440:three_prime_UTR
CCAGTGATGATAAAGCGGAA+CGG 0.692513 4_1:+49080538 Msa0552440:three_prime_UTR
GACCGTTCAAGAATTCGAAG+AGG 0.699725 4_1:-49075588 None:intergenic
TATGCAACCGTAGTTCTGTG+TGG 0.732630 4_1:-49077874 None:intergenic
GTTCGAGGGACACGATACAG+GGG 0.745981 4_1:+49072749 Msa0552440:CDS
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+49068744 Msa0552440:CDS
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+49069811 Msa0552440:CDS
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+49072436 Msa0552440:CDS
GATCGAGGGACAAAACGTAG+GGG 0.771509 4_1:+49072914 Msa0552440:CDS
GATCGAGGGACAAAACCTAG+GGG 0.787271 4_1:+49070609 Msa0552440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAATTTAATTTTGTAC+AGG - chr4_1:49068381-49068400 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:49068706-49068725 Msa0552440:intron 10.0%
!! ACAAAATTATAACATTTATT+CGG + chr4_1:49069186-49069205 Msa0552440:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:49068706-49068725 Msa0552440:intron 10.0%
!! ACAAAATTATAACATTTATT+CGG + chr4_1:49069186-49069205 Msa0552440:intron 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:49068706-49068725 Msa0552440:intron 10.0%
!!! TAAATAATATAATTTTGTAC+AGG - chr4_1:49070734-49070753 None:intergenic 10.0%
!! ATGAAGAATAAAAAAAAAAT+TGG - chr4_1:49071703-49071722 None:intergenic 10.0%
!!! TAAATGTTATAATTTTCTAA+AGG - chr4_1:49072247-49072266 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:49068706-49068725 Msa0552440:intron 10.0%
!!! TAAATTTTATAATTTTGTAC+AGG - chr4_1:49072561-49072580 None:intergenic 10.0%
!! AGAAAATTATAACATTTATT+CGG + chr4_1:49068706-49068725 Msa0552440:intron 10.0%
!! GAAATATAAAATTGATAAAA+TGG + chr4_1:49073914-49073933 Msa0552440:intron 10.0%
!! TGTTTGTTTAATATATAATT+TGG - chr4_1:49076490-49076509 None:intergenic 10.0%
!! TCTTTATATAATTTAAAAAC+TGG + chr4_1:49076736-49076755 Msa0552440:intron 10.0%
!!! TTATTTTGAATGTTTATTTA+AGG - chr4_1:49080594-49080613 None:intergenic 10.0%
!!! AAGAAATATATTTTTTGTTG+AGG + chr4_1:49067879-49067898 Msa0552440:five_prime_UTR 15.0%
!!! TAAATTTTATAATTTTGTCC+AGG - chr4_1:49068539-49068558 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!! ATAAAAAAAGATTGAAACAT+AGG - chr4_1:49068791-49068810 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:49068798-49068817 Msa0552440:intron 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:49069184-49069203 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:49069184-49069203 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!! ATAAAAATAGATTGAAACAT+AGG - chr4_1:49069858-49069877 None:intergenic 15.0%
!!! AATCTATTTTTATTGTTTGA+TGG + chr4_1:49069865-49069884 Msa0552440:intron 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:49068798-49068817 Msa0552440:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:49070102-49070121 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!! ATAAAAAAAGATTGAAACAT+AGG - chr4_1:49068791-49068810 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:49068798-49068817 Msa0552440:intron 15.0%
!!! ATGAAAAAGCAAAAAATTTT+TGG - chr4_1:49070866-49070885 None:intergenic 15.0%
!! GTGAAAAAGAAAAAAAAATT+TGG - chr4_1:49071031-49071050 None:intergenic 15.0%
!!! ATGAAAAAGCAAAAAAATTT+TGG - chr4_1:49071200-49071219 None:intergenic 15.0%
!! GAAAAAGAAAGAAAAAAAAT+TGG - chr4_1:49071365-49071384 None:intergenic 15.0%
!!! ATGAAAATGCAAAAAAATTT+TGG - chr4_1:49071538-49071557 None:intergenic 15.0%
!! ATGAAAAAGCAAAAAAAAAT+TGG - chr4_1:49071879-49071898 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!! ATAAAAAAAGATTGAAACAT+AGG - chr4_1:49068791-49068810 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:49068798-49068817 Msa0552440:intron 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!!! TAAATGTTATAATTTTCTAC+AGG - chr4_1:49068704-49068723 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:49069184-49069203 None:intergenic 15.0%
!!! TAAATGTTATAATTTTGTAC+AGG - chr4_1:49069184-49069203 None:intergenic 15.0%
!!! AATCTTTTTTTATTGTTTGA+TGG + chr4_1:49068798-49068817 Msa0552440:intron 15.0%
!!! TAAATGTTATATTTTTGTAC+AGG - chr4_1:49070102-49070121 None:intergenic 15.0%
!!! ATGAAAAAGCAAATTTTTTT+TGG - chr4_1:49070231-49070250 None:intergenic 15.0%
!! AAAATACCATATTATCAAAA+TGG + chr4_1:49074134-49074153 Msa0552440:intron 15.0%
!! ATATATCAAGAACTTAATTT+CGG + chr4_1:49074287-49074306 Msa0552440:intron 15.0%
!!! GTTTTATAATTTCATTTTCT+AGG + chr4_1:49074821-49074840 Msa0552440:intron 15.0%
!!! AAAAATTAATTGTTGTTTGT+TGG - chr4_1:49075947-49075966 None:intergenic 15.0%
!! TTTATCAAAACAAAATGAAA+AGG + chr4_1:49076450-49076469 Msa0552440:intron 15.0%
!! AATATTATTATCAACGTATA+AGG - chr4_1:49076765-49076784 None:intergenic 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:49077263-49077282 Msa0552440:intron 15.0%
!! ATTAGCTAATCTTATTAAAA+AGG + chr4_1:49077263-49077282 Msa0552440:intron 15.0%
!! TAACATGAAAAAATAATTGA+TGG - chr4_1:49077508-49077527 None:intergenic 15.0%
!! AAAAGAACAAAATTAGATAT+AGG - chr4_1:49077684-49077703 None:intergenic 15.0%
!! AAATTGAAAATTCATATTTG+AGG + chr4_1:49078361-49078380 Msa0552440:intron 15.0%
!! AATTGAAAATTCATATTTGA+GGG + chr4_1:49078362-49078381 Msa0552440:intron 15.0%
!!! AATATTTTGGATAATTAACT+CGG + chr4_1:49078586-49078605 Msa0552440:intron 15.0%
!!! AACTACAGATAAAATTTTAT+AGG - chr4_1:49079293-49079312 None:intergenic 15.0%
!!! TAAAAGTTTAAAATTGAAAC+AGG - chr4_1:49079991-49080010 None:intergenic 15.0%
!!! GTTTCAATTTTAAACTTTTA+TGG + chr4_1:49079991-49080010 Msa0552440:three_prime_UTR 15.0%
!!! ATTATGTATTTTTTATTCTC+TGG + chr4_1:49080358-49080377 Msa0552440:three_prime_UTR 15.0%
!!! TCACTTTTTAATTTATTTTC+AGG - chr4_1:49080432-49080451 None:intergenic 15.0%
!! AGAAAATAATAATCTATCGT+TGG + chr4_1:49067929-49067948 Msa0552440:five_prime_UTR 20.0%
!!! TATTTTAGTTGACTAATAAG+TGG + chr4_1:49067956-49067975 Msa0552440:five_prime_UTR 20.0%
!!! CTTTGTTTTTTATTGTTTGA+TGG + chr4_1:49068471-49068490 Msa0552440:intron 20.0%
!! ATAAAAAAAGATTGAAACAC+AGG - chr4_1:49070023-49070042 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:49070115-49070134 Msa0552440:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:49070190-49070209 None:intergenic 20.0%
!!! GATGAAAAAGCAAATTTTTT+TGG - chr4_1:49070232-49070251 None:intergenic 20.0%
!!! TAAATGTTATAATTTTCTCC+AGG - chr4_1:49070569-49070588 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:49070822-49070841 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:49070822-49070841 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:49070822-49070841 None:intergenic 20.0%
!! AAAAAAGAAGATTGAAACAT+AGG - chr4_1:49070822-49070841 None:intergenic 20.0%
!! AATAAAAAAAGATTGAAACG+TGG - chr4_1:49072004-49072023 None:intergenic 20.0%
!!! ACATTTATTCCTAATTTTGT+AGG + chr4_1:49070115-49070134 Msa0552440:intron 20.0%
!! TAAAAAGAAGATTCAAACAT+AGG - chr4_1:49070190-49070209 None:intergenic 20.0%
!!! ATGAACAAGCAAATTTTTTT+TGG - chr4_1:49073796-49073815 None:intergenic 20.0%
!!! GTTGGCAAATTTTATAATTT+TGG - chr4_1:49073839-49073858 None:intergenic 20.0%
!!! TAAGAACCATTTTGATAATA+TGG - chr4_1:49074143-49074162 None:intergenic 20.0%
!! TTATTTGACTATTCTTTACA+TGG - chr4_1:49074325-49074344 None:intergenic 20.0%
!! ACAACAAAATACTTTATTAG+AGG + chr4_1:49074506-49074525 Msa0552440:intron 20.0%
!! ACTGTTGTATATGAAATAAA+AGG - chr4_1:49074599-49074618 None:intergenic 20.0%
!! ATTATAAAACTAGTTACAGT+AGG - chr4_1:49074811-49074830 None:intergenic 20.0%
!! ATCTACAATTTAAATAAGAG+AGG + chr4_1:49075021-49075040 Msa0552440:intron 20.0%
!! TCTACAATTTAAATAAGAGA+GGG + chr4_1:49075022-49075041 Msa0552440:intron 20.0%
!! ATGCAATACATGAAAAAAAT+AGG - chr4_1:49075263-49075282 None:intergenic 20.0%
!! TATATAATGAGTACAAAAAG+TGG - chr4_1:49075829-49075848 None:intergenic 20.0%
!! TATAAAGTTAACTGTTGATA+TGG + chr4_1:49075845-49075864 Msa0552440:intron 20.0%
!! CTTCCTGTTTATATATATAA+AGG + chr4_1:49075908-49075927 Msa0552440:intron 20.0%
!! ATGCCTTTATATATATAAAC+AGG - chr4_1:49075914-49075933 None:intergenic 20.0%
!! AAGTAAAAGAAACAGTTAAA+GGG + chr4_1:49076519-49076538 Msa0552440:intron 20.0%
!! CAACTAGAATTTATTTATCA+TGG + chr4_1:49077006-49077025 Msa0552440:intron 20.0%
!! AAGCAATTACTGTAAATTTA+TGG + chr4_1:49077091-49077110 Msa0552440:intron 20.0%
!!! TTTTTTCAATCTATTCTCAA+GGG + chr4_1:49077124-49077143 Msa0552440:intron 20.0%
!! AAACTAAATCTTCAAACAAT+AGG - chr4_1:49077474-49077493 None:intergenic 20.0%
!! AGAAAAAAAAAAACTGAGTA+AGG - chr4_1:49078071-49078090 None:intergenic 20.0%
!! AATGTCAAAATCCATTTAAA+GGG - chr4_1:49078256-49078275 None:intergenic 20.0%
!!! AAGCTGTAATTTCAATATTT+TGG + chr4_1:49078573-49078592 Msa0552440:intron 20.0%
!!! ATTTTATCTGTAGTTGAAAT+TGG + chr4_1:49079298-49079317 Msa0552440:intron 20.0%
!!! TAAAATGCTTTTCAAAACAA+GGG - chr4_1:49079344-49079363 None:intergenic 20.0%
!!! TTTTGAAAAGCATTTTACTT+TGG + chr4_1:49079347-49079366 Msa0552440:intron 20.0%
!!! AATATCTACACAACTTTTTT+GGG - chr4_1:49079585-49079604 None:intergenic 20.0%
!!! AAATATCTACACAACTTTTT+TGG - chr4_1:49079586-49079605 None:intergenic 20.0%
!! ATGTTAAGGAACAAATTATA+AGG - chr4_1:49080252-49080271 None:intergenic 20.0%
!!! TTTTTGACAAGTTATTTGAA+TGG + chr4_1:49080482-49080501 Msa0552440:three_prime_UTR 20.0%
!!! TTGAATGTTTATTTAAGGTA+TGG - chr4_1:49080589-49080608 None:intergenic 20.0%
!!! CTTTTTTTGTTTTGTCACAA+AGG - chr4_1:49068169-49068188 None:intergenic 25.0%
! CTACAAAATTCGGAATAAAA+GGG - chr4_1:49068352-49068371 None:intergenic 25.0%
! ACTACAAAATTCGGAATAAA+AGG - chr4_1:49068353-49068372 None:intergenic 25.0%
!! GGTGAAAAAGCAAATTTTAT+TGG - chr4_1:49068832-49068851 None:intergenic 25.0%
!! GGTGAAAAAGCAAAAATTTT+TGG - chr4_1:49068997-49069016 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:49069146-49069165 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:49069146-49069165 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:49069146-49069165 None:intergenic 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:49069146-49069165 None:intergenic 25.0%
! AATTCGGAATAAATGTTAAC+AGG - chr4_1:49069780-49069799 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:49070064-49070083 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:49070287-49070306 Msa0552440:intron 25.0%
!!! GGTGAAAAAGCAAATTTTTT+TGG - chr4_1:49069146-49069165 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:49070287-49070306 Msa0552440:intron 25.0%
! TGTACAAGTAAAAATGAATG+AGG - chr4_1:49071053-49071072 None:intergenic 25.0%
!! TATTCCGAATTTTGTAGTTA+TGG + chr4_1:49071423-49071442 Msa0552440:intron 25.0%
! AATAAAGAAAGATTGAAACG+TGG - chr4_1:49070991-49071010 None:intergenic 25.0%
!!! TCATCTCATTCATTTTTTAC+TGG + chr4_1:49071383-49071402 Msa0552440:intron 25.0%
!! TATTCCGAATTTTGTAGTTA+TGG + chr4_1:49071423-49071442 Msa0552440:intron 25.0%
! ATGGAGAAGGAAAAAAAATT+TGG - chr4_1:49072044-49072063 None:intergenic 25.0%
! CAAGTAAAAAATGAATGAGA+TGG - chr4_1:49071386-49071405 None:intergenic 25.0%
! ATAAAAAAAGATTGACACAC+AGG - chr4_1:49073418-49073437 None:intergenic 25.0%
!! GTGAAAAAGCAAATTTTGTT+TGG - chr4_1:49070064-49070083 None:intergenic 25.0%
!! TATTCCTAATTTTGTAGTTC+TGG + chr4_1:49070287-49070306 Msa0552440:intron 25.0%
! GCAAAAAAAATGTCAAATGT+TGG - chr4_1:49073857-49073876 None:intergenic 25.0%
!!! TTTTTTTTGCTTCTCATTGT+TGG + chr4_1:49073867-49073886 Msa0552440:intron 25.0%
! GTTATTTGCAGTAATGTTTA+AGG + chr4_1:49074530-49074549 Msa0552440:intron 25.0%
! AGGAATAACAAAATCGAAAA+AGG - chr4_1:49074579-49074598 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+CGG - chr4_1:49074631-49074650 None:intergenic 25.0%
! AACCATTGTTCTGTTATAAA+AGG + chr4_1:49074749-49074768 Msa0552440:intron 25.0%
!!! GCTACTCTGTTTTTATTTAT+GGG - chr4_1:49074891-49074910 None:intergenic 25.0%
!! TGATTTTATGATATGCTGAT+TGG - chr4_1:49074936-49074955 None:intergenic 25.0%
! ATTTAAATAAGAGAGGGAAA+TGG + chr4_1:49075028-49075047 Msa0552440:intron 25.0%
!!! TCTTTTGAACAGTTTGAAAT+TGG + chr4_1:49075340-49075359 Msa0552440:intron 25.0%
!! GCAGATTTTCAAATAAAGAA+AGG - chr4_1:49075410-49075429 None:intergenic 25.0%
! AACATTACAAGGAAAAAATG+AGG - chr4_1:49075432-49075451 None:intergenic 25.0%
! ATATTTCAACGAACATTACA+AGG - chr4_1:49075443-49075462 None:intergenic 25.0%
!!! TATATTTTCTCTTAGCTTTC+TGG + chr4_1:49075475-49075494 Msa0552440:intron 25.0%
! ATAATTTGGCAAATTGTAGA+AGG - chr4_1:49076476-49076495 None:intergenic 25.0%
! GAAGTAAAAGAAACAGTTAA+AGG + chr4_1:49076518-49076537 Msa0552440:intron 25.0%
!! TATAAAGTGTCAGTATCTTA+TGG - chr4_1:49077038-49077057 None:intergenic 25.0%
! TAAGATACTGACACTTTATA+TGG + chr4_1:49077038-49077057 Msa0552440:intron 25.0%
! TGTAAATTTATGGTTATGCT+TGG + chr4_1:49077101-49077120 Msa0552440:intron 25.0%
!!! GTTTTTTCAATCTATTCTCA+AGG + chr4_1:49077123-49077142 Msa0552440:intron 25.0%
!! AATAATTGATGGTAACTACA+TGG - chr4_1:49077497-49077516 None:intergenic 25.0%
!!! ATTTTTTCATGTTACCAATC+AGG + chr4_1:49077514-49077533 Msa0552440:intron 25.0%
! GAATGTCAAAATCCATTTAA+AGG - chr4_1:49078257-49078276 None:intergenic 25.0%
!! GTTATTTCGATTAAGAACTT+TGG + chr4_1:49078482-49078501 Msa0552440:intron 25.0%
! TAGTTAGTTATGTTAAAGTC+TGG + chr4_1:49078634-49078653 Msa0552440:intron 25.0%
! AGTTAGTTATGTTAAAGTCT+GGG + chr4_1:49078635-49078654 Msa0552440:intron 25.0%
!! TACAATCTTTTCATTTAGTG+TGG + chr4_1:49078727-49078746 Msa0552440:intron 25.0%
!! GTAAAATGCTTTTCAAAACA+AGG - chr4_1:49079345-49079364 None:intergenic 25.0%
! GAACAAAAAAAATAGTGTTC+AGG - chr4_1:49079418-49079437 None:intergenic 25.0%
!!! CACTATTTTTTTTGTTCCTA+TGG + chr4_1:49079421-49079440 Msa0552440:intron 25.0%
!! ATCAGTTTCTAGATTCTAAA+CGG - chr4_1:49079462-49079481 None:intergenic 25.0%
!!! ACTGAAATGTTGATTTAATG+TGG - chr4_1:49079613-49079632 None:intergenic 25.0%
! AAGTGAAGTAAATATTTGTG+CGG + chr4_1:49079636-49079655 Msa0552440:intron 25.0%
! CAATAGTCAATATTGTTCAT+AGG - chr4_1:49079667-49079686 None:intergenic 25.0%
! CTAAGTATAAAAAAACCTCA+TGG + chr4_1:49079707-49079726 Msa0552440:intron 25.0%
! CATTTATTAATCCAAACTTG+TGG + chr4_1:49079939-49079958 Msa0552440:three_prime_UTR 25.0%
! ATTAAAACTTTCCACAAGTT+TGG - chr4_1:49079953-49079972 None:intergenic 25.0%
! GAAACAGGACTAAAAAAAAA+TGG - chr4_1:49079976-49079995 None:intergenic 25.0%
!! TATGGTTGTAGATTATGTTT+TGG + chr4_1:49080009-49080028 Msa0552440:three_prime_UTR 25.0%
! AAATACCTTCAATGCAATTT+CGG + chr4_1:49080162-49080181 Msa0552440:three_prime_UTR 25.0%
CTTTGTTCAAAAAACCTAAG+TGG + chr4_1:49067984-49068003 Msa0552440:five_prime_UTR 30.0%
AATAAAGAAGATTACCGATC+TGG - chr4_1:49068140-49068159 None:intergenic 30.0%
!! TTGTTTTGTCACAAAGGATA+AGG - chr4_1:49068163-49068182 None:intergenic 30.0%
CAGGTGAAAACTACAAAATT+CGG - chr4_1:49068362-49068381 None:intergenic 30.0%
!!! TGAAAAGGGGGAATTTTTTT+TGG - chr4_1:49068505-49068524 None:intergenic 30.0%
AGGTGAAAACTGAATGAAAA+GGG - chr4_1:49068519-49068538 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! GGTGAAAAGGCAAAAAATTT+TGG - chr4_1:49068667-49068686 None:intergenic 30.0%
TATTCCGAATTTCATAGTTC+TGG + chr4_1:49068722-49068741 Msa0552440:CDS 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:49068894-49068913 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:49068894-49068913 Msa0552440:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:49068895-49068914 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
GGTGAAAAGGCAAAAAAATT+TGG - chr4_1:49069743-49069762 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:49070120-49070139 Msa0552440:intron 30.0%
TTATAACATTTACACGATGC+AGG + chr4_1:49070442-49070461 Msa0552440:CDS 30.0%
TATAACATTTACACGATGCA+GGG + chr4_1:49070443-49070462 Msa0552440:CDS 30.0%
! GGTGAAAAGGCAAAAATTTT+TGG - chr4_1:49070532-49070551 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
CGATCTTGAACTACAAAATT+AGG - chr4_1:49071263-49071282 None:intergenic 30.0%
! AATTTTGTAGTTCAAGATCG+AGG + chr4_1:49071263-49071282 Msa0552440:intron 30.0%
! ATTTTGTAGTTCAAGATCGA+GGG + chr4_1:49071264-49071283 Msa0552440:intron 30.0%
CGATCCATAACTACAAAATT+CGG - chr4_1:49071430-49071449 None:intergenic 30.0%
! AATTTTGTAGTTATGGATCG+AGG + chr4_1:49071430-49071449 Msa0552440:intron 30.0%
! ATTTTGTAGTTATGGATCGA+GGG + chr4_1:49071431-49071450 Msa0552440:intron 30.0%
! CGATCTAGAACTACAAAATT+AGG - chr4_1:49071601-49071620 None:intergenic 30.0%
!!! AATTTTGTAGTTCTAGATCG+AGG + chr4_1:49071601-49071620 Msa0552440:intron 30.0%
!!! ATTTTGTAGTTCTAGATCGA+GGG + chr4_1:49071602-49071621 Msa0552440:intron 30.0%
CGATCCATAACTACAAAATT+CGG - chr4_1:49071430-49071449 None:intergenic 30.0%
! AATTTTGTAGTTATGGATCG+AGG + chr4_1:49071430-49071449 Msa0552440:intron 30.0%
! ATTTTGTAGTTATGGATCGA+GGG + chr4_1:49071431-49071450 Msa0552440:intron 30.0%
! CGATCTAGAACTACAAAATT+AGG - chr4_1:49071601-49071620 None:intergenic 30.0%
!!! AATTTTGTAGTTCTAGATCG+AGG + chr4_1:49071601-49071620 Msa0552440:intron 30.0%
!!! ATTTTGTAGTTCTAGATCGA+GGG + chr4_1:49071602-49071621 Msa0552440:intron 30.0%
AAAAATGAATGAGATGGAGA+AGG - chr4_1:49072057-49072076 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
TATAACATTTATTCGGATCG+AGG + chr4_1:49069043-49069062 Msa0552440:intron 30.0%
ATAACATTTATTCGGATCGA+GGG + chr4_1:49069044-49069063 Msa0552440:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! GGTGAAAAAGCAAATTTTGT+TGG - chr4_1:49072524-49072543 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATAACATTTATTCGGTTCG+AGG + chr4_1:49072734-49072753 Msa0552440:CDS 30.0%
! ATAACATTTATTCGGTTCGA+GGG + chr4_1:49072735-49072754 Msa0552440:CDS 30.0%
! GGTGAAAAGGCAAAAAATTT+TGG - chr4_1:49068667-49068686 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
TGATCCAGAACTACAAAATT+CGG - chr4_1:49068894-49068913 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCA+AGG + chr4_1:49068894-49068913 Msa0552440:intron 30.0%
!!! ATTTTGTAGTTCTGGATCAA+GGG + chr4_1:49068895-49068914 Msa0552440:intron 30.0%
!!! GGTGAAAAGGCAAATTTTTT+TGG - chr4_1:49073294-49073313 None:intergenic 30.0%
! TATTCCGAATTTTGTAGTTC+TGG + chr4_1:49068557-49068576 Msa0552440:intron 30.0%
! TATTCCTAATTTTGTAGGTC+TGG + chr4_1:49070120-49070139 Msa0552440:intron 30.0%
AGATCCAGAACTACAAAATT+AGG - chr4_1:49073690-49073709 None:intergenic 30.0%
!!! AATTTTGTAGTTCTGGATCT+AGG + chr4_1:49073690-49073709 Msa0552440:intron 30.0%
!!! ATTTTGTAGTTCTGGATCTA+GGG + chr4_1:49073691-49073710 Msa0552440:intron 30.0%
ACTTAAACCTTGAAAAGTTG+GGG - chr4_1:49073968-49073987 None:intergenic 30.0%
GACTTAAACCTTGAAAAGTT+GGG - chr4_1:49073969-49073988 None:intergenic 30.0%
TGACTTAAACCTTGAAAAGT+TGG - chr4_1:49073970-49073989 None:intergenic 30.0%
!! GCTTTAGATTTTGTAAGACT+TGG - chr4_1:49074001-49074020 None:intergenic 30.0%
GTTCAGAAAAGAGAAAAAGA+AGG - chr4_1:49074067-49074086 None:intergenic 30.0%
! TTTTTGTGCAAAATTGCAGA+TGG - chr4_1:49074116-49074135 None:intergenic 30.0%
ATTTCCCTTAAATGTCCTTT+GGG - chr4_1:49074171-49074190 None:intergenic 30.0%
AATTTCCCTTAAATGTCCTT+TGG - chr4_1:49074172-49074191 None:intergenic 30.0%
TATCAAGAACTTAATTTCGG+AGG + chr4_1:49074290-49074309 Msa0552440:intron 30.0%
AATAAGACGAAAGAATGAAC+AGG - chr4_1:49074391-49074410 None:intergenic 30.0%
GAAACAACGATGAGAAAAAA+GGG - chr4_1:49074442-49074461 None:intergenic 30.0%
AGAAACAACGATGAGAAAAA+AGG - chr4_1:49074443-49074462 None:intergenic 30.0%
! GTTTAAAATAGCAACTAGAG+TGG - chr4_1:49074732-49074751 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG - chr4_1:49074754-49074773 None:intergenic 30.0%
TAGAGGTGAAATGAAAGTTA+AGG - chr4_1:49074858-49074877 None:intergenic 30.0%
!!! GGCTACTCTGTTTTTATTTA+TGG - chr4_1:49074892-49074911 None:intergenic 30.0%
! ATATGCTGATTGGTTGAAAT+TGG - chr4_1:49074926-49074945 None:intergenic 30.0%
CATCAGATGTAAAGAAATGA+TGG + chr4_1:49074963-49074982 Msa0552440:intron 30.0%
! AAAAGCATGGTTGGAAAAAA+TGG - chr4_1:49075106-49075125 None:intergenic 30.0%
! AAAGAAAGGTGTATTTGCAT+GGG - chr4_1:49075396-49075415 None:intergenic 30.0%
! TAAAGAAAGGTGTATTTGCA+TGG - chr4_1:49075397-49075416 None:intergenic 30.0%
!! AGAGATTTCCATTTTTCTCA+AGG - chr4_1:49075732-49075751 None:intergenic 30.0%
TATATAAACAGGAAGATACC+AGG - chr4_1:49075903-49075922 None:intergenic 30.0%
ATATAACAATCAGTGAGTTC+TGG - chr4_1:49075990-49076009 None:intergenic 30.0%
ATCTCCTCAAAAGAAAGTTT+GGG - chr4_1:49076027-49076046 None:intergenic 30.0%
! TTTGTGCAAATTTTTACTGC+AGG - chr4_1:49076064-49076083 None:intergenic 30.0%
CACAAATTTGCACAAATTTG+AGG + chr4_1:49076095-49076114 Msa0552440:intron 30.0%
! ATGCTTCTTGTGATTTCTTT+TGG + chr4_1:49076139-49076158 Msa0552440:intron 30.0%
GTACGAATCTATCATCAATT+TGG + chr4_1:49076161-49076180 Msa0552440:intron 30.0%
CAGTAATTCAAAAAGCTCAA+TGG - chr4_1:49076216-49076235 None:intergenic 30.0%
! TTTTGAATTACTGTCTCGAA+TGG + chr4_1:49076223-49076242 Msa0552440:intron 30.0%
TGATTCTGCTTTATAACTGA+GGG - chr4_1:49076389-49076408 None:intergenic 30.0%
TACAGACATAATTAGCTACA+TGG - chr4_1:49076564-49076583 None:intergenic 30.0%
! TCATAATCTCAAGTCTTATC+TGG + chr4_1:49076682-49076701 Msa0552440:intron 30.0%
!! CTTTCTTTTTGAAAAGGCAA+AGG - chr4_1:49076925-49076944 None:intergenic 30.0%
GGATTACTATAGTCAACAAT+GGG - chr4_1:49077295-49077314 None:intergenic 30.0%
AGGATTACTATAGTCAACAA+TGG - chr4_1:49077296-49077315 None:intergenic 30.0%
AACGAAAACTAAATCTTCAC+GGG - chr4_1:49077371-49077390 None:intergenic 30.0%
CAACGAAAACTAAATCTTCA+CGG - chr4_1:49077372-49077391 None:intergenic 30.0%
! TTATGAAACTTTAAGAGCTC+TGG + chr4_1:49078106-49078125 Msa0552440:CDS 30.0%
TGTTATTACCTCCCTTTAAA+TGG + chr4_1:49078242-49078261 Msa0552440:intron 30.0%
ATTTGAGGGTGAAAAAGTAA+AGG + chr4_1:49078376-49078395 Msa0552440:intron 30.0%
!!! ATTGAAATGCTGATTTTCAC+TGG + chr4_1:49078456-49078475 Msa0552440:intron 30.0%
GTAATAATAGGCATCACTAA+AGG - chr4_1:49078510-49078529 None:intergenic 30.0%
ACACGACATAGAGTAATAAT+AGG - chr4_1:49078522-49078541 None:intergenic 30.0%
! CATTTTATCTGCATATGAAG+AGG + chr4_1:49078545-49078564 Msa0552440:intron 30.0%
GTTAGTTATGTTAAAGTCTG+GGG + chr4_1:49078636-49078655 Msa0552440:intron 30.0%
TTAGTTATGTTAAAGTCTGG+GGG + chr4_1:49078637-49078656 Msa0552440:intron 30.0%
AATGTTGTATACTCGTCATA+CGG - chr4_1:49078684-49078703 None:intergenic 30.0%
! GATTCATTTCTTTTCGTTTG+TGG + chr4_1:49078766-49078785 Msa0552440:intron 30.0%
CGTGTATTCTTTGTATGTAT+TGG + chr4_1:49079056-49079075 Msa0552440:intron 30.0%
TGATTATGTGAGAAGAAATC+TGG + chr4_1:49079094-49079113 Msa0552440:intron 30.0%
ATCTAACATAGGGTTTACAA+AGG + chr4_1:49079126-49079145 Msa0552440:intron 30.0%
TCTAACATAGGGTTTACAAA+GGG + chr4_1:49079127-49079146 Msa0552440:intron 30.0%
! TCAGTTTCTAGATTCTAAAC+GGG - chr4_1:49079461-49079480 None:intergenic 30.0%
CAAGGAAAAAACTAGATTAG+GGG - chr4_1:49079562-49079581 None:intergenic 30.0%
GCAAGGAAAAAACTAGATTA+GGG - chr4_1:49079563-49079582 None:intergenic 30.0%
!! TGTTTTTATCTTGTAGTCTC+AGG + chr4_1:49079781-49079800 Msa0552440:intron 30.0%
AAATACATAATTGAGCGCAA+TGG - chr4_1:49080349-49080368 None:intergenic 30.0%
CAAAAGAACTTGCAATTAAG+CGG - chr4_1:49080515-49080534 None:intergenic 30.0%
!! CTTCTTTTGAAGAACCAGAT+CGG + chr4_1:49068123-49068142 Msa0552440:five_prime_UTR 35.0%
TTTGAAAACCCAGATCTATC+TGG + chr4_1:49068209-49068228 Msa0552440:intron 35.0%
ACAAAAGAGATTATCCGATC+TGG - chr4_1:49068282-49068301 None:intergenic 35.0%
! TATTCCGAATTTTGTAGCTC+TGG + chr4_1:49068399-49068418 Msa0552440:intron 35.0%
GTGAAAACTGAATGAAAAGG+GGG - chr4_1:49068517-49068536 None:intergenic 35.0%
GGTGAAAACTGAATGAAAAG+GGG - chr4_1:49068518-49068537 None:intergenic 35.0%
CAGGTGAAAACTGAATGAAA+AGG - chr4_1:49068520-49068539 None:intergenic 35.0%
! CTTTTCATTCAGTTTTCACC+TGG + chr4_1:49068518-49068537 Msa0552440:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:49068680-49068699 None:intergenic 35.0%
CGATCCAGAACTATGAAATT+CGG - chr4_1:49068729-49068748 None:intergenic 35.0%
!! AATTTCATAGTTCTGGATCG+AGG + chr4_1:49068729-49068748 Msa0552440:CDS 35.0%
!! ATTTCATAGTTCTGGATCGA+GGG + chr4_1:49068730-49068749 Msa0552440:CDS 35.0%
GTACATGTGAAAACTGAATG+AGG - chr4_1:49068853-49068872 None:intergenic 35.0%
TACAGGTGAAAAACTGAATG+AGG - chr4_1:49069167-49069186 None:intergenic 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:49068680-49068699 None:intergenic 35.0%
TAACAGGTGAAAACTGAATG+AGG - chr4_1:49069764-49069783 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
! GGTGAAAAGGCAAATTTTGT+TGG - chr4_1:49069899-49069918 None:intergenic 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:49068680-49068699 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:49069920-49069939 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
CGATCCAGAACTACAAAATT+AGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
ATAACATTTACACGATGCAG+GGG + chr4_1:49070444-49070463 Msa0552440:CDS 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:49068680-49068699 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
! CGTGAAAAGGCAAATTTTGT+TGG - chr4_1:49070697-49070716 None:intergenic 35.0%
GAAAACTGAATGACGTGAAA+AGG - chr4_1:49070078-49070097 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
CGATCCAGAACTACAAAATT+AGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
CGTTCCAGAACTACAAAATT+CGG - chr4_1:49071093-49071112 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGAACG+AGG + chr4_1:49071093-49071112 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGAACGA+GGG + chr4_1:49071094-49071113 Msa0552440:intron 35.0%
! TTTTGTAGTTATGGATCGAG+GGG + chr4_1:49071432-49071451 Msa0552440:intron 35.0%
! TTTTGTAGTTATGGATCGAG+GGG + chr4_1:49071432-49071451 Msa0552440:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
CTAAAGGTGAAAACTGAAAG+AGG - chr4_1:49072231-49072250 None:intergenic 35.0%
! GGTGAAACGGCAAAAATTTT+TGG - chr4_1:49072359-49072378 None:intergenic 35.0%
GAAAACTGAATGAGGTGAAA+CGG - chr4_1:49068680-49068699 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
GTACAGGTGAAAACTTAATG+AGG - chr4_1:49072545-49072564 None:intergenic 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
CGATCCAGAACTACAAAATT+CGG - chr4_1:49068564-49068583 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCG+AGG + chr4_1:49068564-49068583 Msa0552440:intron 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
GTACAGGTGAAAACTTAATG+AGG - chr4_1:49072545-49072564 None:intergenic 35.0%
! TATTCCGCATTTTGTAGTTC+TGG + chr4_1:49073184-49073203 Msa0552440:CDS 35.0%
!!! ATTTTGTAGTTCTGGATCGA+GGG + chr4_1:49068565-49068584 Msa0552440:intron 35.0%
GAAAACTGAATGAGGTGAAA+AGG - chr4_1:49068680-49068699 None:intergenic 35.0%
CTACAAGTGAAAACTGAATG+AGG - chr4_1:49069920-49069939 None:intergenic 35.0%
GGATCCAGAACTACAAAATT+CGG - chr4_1:49073356-49073375 None:intergenic 35.0%
!!! AATTTTGTAGTTCTGGATCC+AGG + chr4_1:49073356-49073375 Msa0552440:CDS 35.0%
!!! ATTTTGTAGTTCTGGATCCA+GGG + chr4_1:49073357-49073376 Msa0552440:CDS 35.0%
CAGAATCTGCTCTTCAATTA+CGG - chr4_1:49073895-49073914 None:intergenic 35.0%
!!! TGGTTTTAAACGCTTACTCT+TGG + chr4_1:49073934-49073953 Msa0552440:intron 35.0%
!!! GGTTTTAAACGCTTACTCTT+GGG + chr4_1:49073935-49073954 Msa0552440:intron 35.0%
CTTAAACCTTGAAAAGTTGG+GGG - chr4_1:49073967-49073986 None:intergenic 35.0%
ATGGTTCTTATAACACCCAA+AGG + chr4_1:49074153-49074172 Msa0552440:intron 35.0%
TAACACCCAAAGGACATTTA+AGG + chr4_1:49074163-49074182 Msa0552440:intron 35.0%
AACACCCAAAGGACATTTAA+GGG + chr4_1:49074164-49074183 Msa0552440:intron 35.0%
GAAAAAAGGGAAAGGAGAAA+GGG - chr4_1:49074429-49074448 None:intergenic 35.0%
AGAAAAAAGGGAAAGGAGAA+AGG - chr4_1:49074430-49074449 None:intergenic 35.0%
AACGATGAGAAAAAAGGGAA+AGG - chr4_1:49074437-49074456 None:intergenic 35.0%
TTATGGGTTTCATGTGATAG+AGG - chr4_1:49074875-49074894 None:intergenic 35.0%
TTGAAATTGGTATGGCTAGT+TGG - chr4_1:49074913-49074932 None:intergenic 35.0%
! CTGATTGGTTGAAATTGGTA+TGG - chr4_1:49074921-49074940 None:intergenic 35.0%
CACAAATAAGAGGTTAAGGT+TGG - chr4_1:49075060-49075079 None:intergenic 35.0%
! AGAAAAGGTGCACAAATAAG+AGG - chr4_1:49075070-49075089 None:intergenic 35.0%
! GTGATGAAGAGAGGTATATT+GGG - chr4_1:49075145-49075164 None:intergenic 35.0%
! AGTGATGAAGAGAGGTATAT+TGG - chr4_1:49075146-49075165 None:intergenic 35.0%
AGAATCTTAGTGATGAAGAG+AGG - chr4_1:49075154-49075173 None:intergenic 35.0%
AAGAGACAAATCAGAACAGT+GGG - chr4_1:49075324-49075343 None:intergenic 35.0%
AAAGAGACAAATCAGAACAG+TGG - chr4_1:49075325-49075344 None:intergenic 35.0%
! GATATTAGCTTATGGCCATT+TGG - chr4_1:49075507-49075526 None:intergenic 35.0%
TGGCCATAAGCTAATATCTT+AGG + chr4_1:49075509-49075528 Msa0552440:intron 35.0%
! CAGCCTAAGATATTAGCTTA+TGG - chr4_1:49075515-49075534 None:intergenic 35.0%
! AACTCCCAAACTTTCTTTTG+AGG + chr4_1:49076020-49076039 Msa0552440:intron 35.0%
GATCTCCTCAAAAGAAAGTT+TGG - chr4_1:49076028-49076047 None:intergenic 35.0%
TGGAAAATCTCAGAAGCTAT+TGG - chr4_1:49076196-49076215 None:intergenic 35.0%
TACGATGCAGATAAAAGAAC+CGG - chr4_1:49076275-49076294 None:intergenic 35.0%
ATTACACTCTTTAGTCCACA+TGG + chr4_1:49076299-49076318 Msa0552440:intron 35.0%
!!! AGTCCACATGGTGAATTTTT+TGG + chr4_1:49076311-49076330 Msa0552440:intron 35.0%
CTTCCAAAAAATTCACCATG+TGG - chr4_1:49076317-49076336 None:intergenic 35.0%
GATTCTGCTTTATAACTGAG+GGG - chr4_1:49076388-49076407 None:intergenic 35.0%
CTGATTCTGCTTTATAACTG+AGG - chr4_1:49076390-49076409 None:intergenic 35.0%
ACATAATTAGCTACATGGTG+TGG - chr4_1:49076559-49076578 None:intergenic 35.0%
TTACACTATTTGAGCTTTGC+AGG + chr4_1:49076633-49076652 Msa0552440:intron 35.0%
GAGATTATGACATAGATGCA+AGG - chr4_1:49076672-49076691 None:intergenic 35.0%
CTTTACTTCCAGTCACAATT+AGG - chr4_1:49076713-49076732 None:intergenic 35.0%
TCAGAAGGTAGAAGTTGTAT+TGG + chr4_1:49076867-49076886 Msa0552440:CDS 35.0%
TTAAGTAAGTAGTCTTCCCT+CGG - chr4_1:49077333-49077352 None:intergenic 35.0%
GAAGACTACTTACTTAACAC+TGG + chr4_1:49077336-49077355 Msa0552440:intron 35.0%
!! TTACTTAACACTGGCTTTCT+TGG + chr4_1:49077345-49077364 Msa0552440:intron 35.0%
! GGAGTACTATAGTCAACAAT+GGG - chr4_1:49077434-49077453 None:intergenic 35.0%
!! AGGAGTACTATAGTCAACAA+TGG - chr4_1:49077435-49077454 None:intergenic 35.0%
TAGGAAGACTAAATGATAGC+AGG - chr4_1:49077455-49077474 None:intergenic 35.0%
AAACAGAATGAACAGCATTG+AGG - chr4_1:49077734-49077753 None:intergenic 35.0%
!! AACTTTAAGAGCTCTGGATT+CGG + chr4_1:49078112-49078131 Msa0552440:CDS 35.0%
!! AAGAGCATTTATCTCTTCCT+CGG - chr4_1:49078165-49078184 None:intergenic 35.0%
!! TGGCAGATTACTTACTTTTG+GGG - chr4_1:49078215-49078234 None:intergenic 35.0%
!! CTGGCAGATTACTTACTTTT+GGG - chr4_1:49078216-49078235 None:intergenic 35.0%
! TCTGGCAGATTACTTACTTT+TGG - chr4_1:49078217-49078236 None:intergenic 35.0%
GGAGGTAATAACAATTGATC+TGG - chr4_1:49078235-49078254 None:intergenic 35.0%
GTCAAAATCCATTTAAAGGG+AGG - chr4_1:49078253-49078272 None:intergenic 35.0%
! ATAGTGAGTTTCATTTTCCG+AGG - chr4_1:49078325-49078344 None:intergenic 35.0%
! TCTTTTCATTTAGTGTGGAG+TGG + chr4_1:49078732-49078751 Msa0552440:intron 35.0%
GACACAGGATAATTCAAATG+CGG + chr4_1:49078794-49078813 Msa0552440:CDS 35.0%
TGATTGGAGCAAGTTTATGT+TGG + chr4_1:49078861-49078880 Msa0552440:CDS 35.0%
GAACATTAGCAGAGATGATT+CGG - chr4_1:49079003-49079022 None:intergenic 35.0%
AACTTGATGAGAACGAAAAC+AGG + chr4_1:49079203-49079222 Msa0552440:intron 35.0%
TGTTCAGGTGAAGTTTCAAT+AGG - chr4_1:49079403-49079422 None:intergenic 35.0%
GGAGAAATCATTCATTCCAT+AGG - chr4_1:49079440-49079459 None:intergenic 35.0%
GGCAAGGAAAAAACTAGATT+AGG - chr4_1:49079564-49079583 None:intergenic 35.0%
GTCAATATTGTTCATAGGCA+TGG - chr4_1:49079662-49079681 None:intergenic 35.0%
GGAACAAATTATAAGGCTTC+CGG - chr4_1:49080245-49080264 None:intergenic 35.0%
GTTCCTTAACATTGTAAACG+TGG + chr4_1:49080260-49080279 Msa0552440:three_prime_UTR 35.0%
TAGCCACGTTTACAATGTTA+AGG - chr4_1:49080266-49080285 None:intergenic 35.0%
TGGCTAATTCTATCCAGAAA+CGG + chr4_1:49080280-49080299 Msa0552440:three_prime_UTR 35.0%
! TGGCATTGAATGCTATCAAA+AGG - chr4_1:49080569-49080588 None:intergenic 35.0%
CGCAACACAACATAACTAAG+TGG + chr4_1:49068020-49068039 Msa0552440:five_prime_UTR 40.0%
GTTGTTTGTCTTTCAAACCC+AGG + chr4_1:49068054-49068073 Msa0552440:five_prime_UTR 40.0%
TGCGAAATTGCAGACAGATT+GGG - chr4_1:49068093-49068112 None:intergenic 40.0%
!! CGATCTGGTTCTTCAAAAGA+AGG - chr4_1:49068125-49068144 None:intergenic 40.0%
!! GGTTGTTCTAAAGGAGATTG+AGG - chr4_1:49068261-49068280 None:intergenic 40.0%
!! CTCCTTTAGAACAACCAGAT+CGG + chr4_1:49068265-49068284 Msa0552440:intron 40.0%
ATCCGATCTGGTTGTTCTAA+AGG - chr4_1:49068270-49068289 None:intergenic 40.0%
CGATCCAGAGCTACAAAATT+CGG - chr4_1:49068406-49068425 None:intergenic 40.0%
!!! AATTTTGTAGCTCTGGATCG+AGG + chr4_1:49068406-49068425 Msa0552440:intron 40.0%
!!! ATTTTGTAGCTCTGGATCGA+GGG + chr4_1:49068407-49068426 Msa0552440:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
!!! GTAGGGGTGTTGTTTTTATC+AGG + chr4_1:49068760-49068779 Msa0552440:CDS 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
GTACAGGTGAAAACTGAATG+AGG - chr4_1:49069466-49069485 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
!!! GTAGGGGTGTTGTTTTTATC+AGG + chr4_1:49068760-49068779 Msa0552440:CDS 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:49070127-49070146 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:49070127-49070146 Msa0552440:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:49070128-49070147 Msa0552440:intron 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
!!! TTTTGTAGTTCTGGATCGAG+GGG + chr4_1:49068566-49068585 Msa0552440:intron 40.0%
!!! TTTTGTAGTTCTGGAACGAG+GGG + chr4_1:49071095-49071114 Msa0552440:intron 40.0%
ACCTGATACATACAATTCCC+CGG - chr4_1:49070964-49070983 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
CTACAGGTGAAAACTGAATG+AGG - chr4_1:49068688-49068707 None:intergenic 40.0%
CGATCCAGAACTACAAAATG+CGG - chr4_1:49073191-49073210 None:intergenic 40.0%
!!! CATTTTGTAGTTCTGGATCG+AGG + chr4_1:49073191-49073210 Msa0552440:CDS 40.0%
CGATCCAGACCTACAAAATT+AGG - chr4_1:49070127-49070146 None:intergenic 40.0%
! AATTTTGTAGGTCTGGATCG+AGG + chr4_1:49070127-49070146 Msa0552440:intron 40.0%
! ATTTTGTAGGTCTGGATCGA+GGG + chr4_1:49070128-49070147 Msa0552440:intron 40.0%
! GCAGAGATGTTGTTTGTATC+AGG + chr4_1:49073721-49073740 Msa0552440:intron 40.0%
AGCAGTAACGATGTTCATTC+TGG + chr4_1:49074018-49074037 Msa0552440:intron 40.0%
CAAAATTGCAGATGGAAAGG+CGG - chr4_1:49074108-49074127 None:intergenic 40.0%
GTGCAAAATTGCAGATGGAA+AGG - chr4_1:49074111-49074130 None:intergenic 40.0%
ACAAGTAGCGTTTCAAGAAC+TGG + chr4_1:49074237-49074256 Msa0552440:intron 40.0%
AGAACTTAATTTCGGAGGCA+CGG + chr4_1:49074295-49074314 Msa0552440:intron 40.0%
TGTTGTGCATAATCGCAGAT+GGG - chr4_1:49074492-49074511 None:intergenic 40.0%
TTGTTGTGCATAATCGCAGA+TGG - chr4_1:49074493-49074512 None:intergenic 40.0%
TGTCTATGCTACAGAGCTAT+AGG + chr4_1:49074705-49074724 Msa0552440:intron 40.0%
GGTGCACAAATAAGAGGTTA+AGG - chr4_1:49075064-49075083 None:intergenic 40.0%
!! GGTGGACTGACTTAAAGAAA+AGG - chr4_1:49075085-49075104 None:intergenic 40.0%
AGCATGGTTGGAAAAAATGG+TGG - chr4_1:49075103-49075122 None:intergenic 40.0%
! AGCATTCACAAAAGCATGGT+TGG - chr4_1:49075115-49075134 None:intergenic 40.0%
! ACCATGCTTTTGTGAATGCT+TGG + chr4_1:49075115-49075134 Msa0552440:intron 40.0%
! CCATGCTTTTGTGAATGCTT+GGG + chr4_1:49075116-49075135 Msa0552440:intron 40.0%
TTCCAGATCACGTGTAGATT+AGG + chr4_1:49075188-49075207 Msa0552440:intron 40.0%
TCCAGATCACGTGTAGATTA+GGG + chr4_1:49075189-49075208 Msa0552440:intron 40.0%
!! TTAGGGTATTGCATATTCCC+TGG + chr4_1:49075206-49075225 Msa0552440:intron 40.0%
!! TAGGGTATTGCATATTCCCT+GGG + chr4_1:49075207-49075226 Msa0552440:intron 40.0%
TTATTTGTGACACACTCCCA+GGG - chr4_1:49075226-49075245 None:intergenic 40.0%
TCCTCTTCCACTTCTTAGTT+AGG + chr4_1:49075369-49075388 Msa0552440:intron 40.0%
CCTCTTCCACTTCTTAGTTA+GGG + chr4_1:49075370-49075389 Msa0552440:intron 40.0%
TGCCTCTTCGAATTCTTGAA+CGG + chr4_1:49075586-49075605 Msa0552440:CDS 40.0%
! ACCTGAAGCTTTGTGGTATT+GGG + chr4_1:49075611-49075630 Msa0552440:CDS 40.0%
!! CAAGGGTACCTTGAGAAAAA+TGG + chr4_1:49075721-49075740 Msa0552440:intron 40.0%
TAAACAGGAAGATACCAGGA+GGG - chr4_1:49075899-49075918 None:intergenic 40.0%
ATAAACAGGAAGATACCAGG+AGG - chr4_1:49075900-49075919 None:intergenic 40.0%
TCATTATCTGCTGCTAGTTC+CGG + chr4_1:49076253-49076272 Msa0552440:intron 40.0%
CTGATGGTACAGTCAAAAAG+TGG - chr4_1:49076348-49076367 None:intergenic 40.0%
TACCATCAGTTCAAAAGTCC+CGG + chr4_1:49076359-49076378 Msa0552440:intron 40.0%
TTTATAACTGAGGGGATACC+GGG - chr4_1:49076380-49076399 None:intergenic 40.0%
CTTTATAACTGAGGGGATAC+CGG - chr4_1:49076381-49076400 None:intergenic 40.0%
CTATTTGAGCTTTGCAGGTT+CGG + chr4_1:49076638-49076657 Msa0552440:intron 40.0%
TATTTGAGCTTTGCAGGTTC+GGG + chr4_1:49076639-49076658 Msa0552440:intron 40.0%
CTTCCAGTCACAATTAGGTA+TGG - chr4_1:49076708-49076727 None:intergenic 40.0%
! GTTAGGTTGTTGGAATCAGA+AGG + chr4_1:49076852-49076871 Msa0552440:CDS 40.0%
GGTAGAAGTTGTATTGGAGT+CGG + chr4_1:49076873-49076892 Msa0552440:CDS 40.0%
AGTTGTATTGGAGTCGGTAT+AGG + chr4_1:49076879-49076898 Msa0552440:intron 40.0%
!! GTCGCGCTTTCTTTTTGAAA+AGG - chr4_1:49076931-49076950 None:intergenic 40.0%
! CTGCTATCATTTTGTTCCGA+GGG + chr4_1:49077314-49077333 Msa0552440:intron 40.0%
TGTTTGGAGACTTCCAGATA+TGG + chr4_1:49077550-49077569 Msa0552440:CDS 40.0%
GTTTGGAGACTTCCAGATAT+GGG + chr4_1:49077551-49077570 Msa0552440:CDS 40.0%
CATCAGATATAGCCCATATC+TGG - chr4_1:49077566-49077585 None:intergenic 40.0%
! CAGATATGGGCTATATCTGA+TGG + chr4_1:49077564-49077583 Msa0552440:CDS 40.0%
TCGTGTTTGAAGACACTTGA+AGG + chr4_1:49077595-49077614 Msa0552440:CDS 40.0%
CGTGTTTGAAGACACTTGAA+GGG + chr4_1:49077596-49077615 Msa0552440:CDS 40.0%
!!! AGTGCTTGGTGTTTTCTTGA+TGG + chr4_1:49077766-49077785 Msa0552440:CDS 40.0%
! TCTTGATGGCTACAATGCTA+AGG + chr4_1:49077780-49077799 Msa0552440:CDS 40.0%
TCTTCCTGTCCACAAATACA+AGG + chr4_1:49078181-49078200 Msa0552440:CDS 40.0%
GAAACCTTGTATTTGTGGAC+AGG - chr4_1:49078188-49078207 None:intergenic 40.0%
GTCCACAAATACAAGGTTTC+TGG + chr4_1:49078188-49078207 Msa0552440:CDS 40.0%
GACCAGAAACCTTGTATTTG+TGG - chr4_1:49078193-49078212 None:intergenic 40.0%
! ATGTTTTCTTTCCCCATCCT+CGG + chr4_1:49078305-49078324 Msa0552440:intron 40.0%
! AGTTTCATTTTCCGAGGATG+GGG - chr4_1:49078319-49078338 None:intergenic 40.0%
! GAGTTTCATTTTCCGAGGAT+GGG - chr4_1:49078320-49078339 None:intergenic 40.0%
! TGAGTTTCATTTTCCGAGGA+TGG - chr4_1:49078321-49078340 None:intergenic 40.0%
CAGGATAATTCAAATGCGGT+TGG + chr4_1:49078798-49078817 Msa0552440:CDS 40.0%
AATGAAACAGACCTGAAGCA+AGG - chr4_1:49078910-49078929 None:intergenic 40.0%
AACATAGGGTTTACAAAGGG+TGG + chr4_1:49079130-49079149 Msa0552440:intron 40.0%
! AACTCAAGCTCATGATGGAA+TGG - chr4_1:49079378-49079397 None:intergenic 40.0%
AGGTAAACTCAAGCTCATGA+TGG - chr4_1:49079383-49079402 None:intergenic 40.0%
GGAAAAAACTAGATTAGGGG+AGG - chr4_1:49079559-49079578 None:intergenic 40.0%
!!! CTACACAACTTTTTTGGGCA+AGG - chr4_1:49079580-49079599 None:intergenic 40.0%
! TCGACAAAGTATCAACCATG+AGG - chr4_1:49079725-49079744 None:intergenic 40.0%
TTCATTCTGTGATACGCACT+TGG - chr4_1:49080076-49080095 None:intergenic 40.0%
AACTGCCGAAATTGCATTGA+AGG - chr4_1:49080170-49080189 None:intergenic 40.0%
GGCTAATTCTATCCAGAAAC+GGG + chr4_1:49080281-49080300 Msa0552440:three_prime_UTR 40.0%
TTAAAGACTCCCGTGAATGT+CGG - chr4_1:49080397-49080416 None:intergenic 40.0%
ACGGGAGTCTTTAAGTCATA+AGG + chr4_1:49080403-49080422 Msa0552440:three_prime_UTR 40.0%
TGAACCCAGTGATGATAAAG+CGG + chr4_1:49080533-49080552 Msa0552440:three_prime_UTR 40.0%
TGTCTTTCAAACCCAGGTCT+AGG + chr4_1:49068060-49068079 Msa0552440:five_prime_UTR 45.0%
TTTCAAACCCAGGTCTAGGT+TGG + chr4_1:49068064-49068083 Msa0552440:five_prime_UTR 45.0%
GTGCGAAATTGCAGACAGAT+TGG - chr4_1:49068094-49068113 None:intergenic 45.0%
CTGGGTTTCCAGATAGATCT+GGG - chr4_1:49068220-49068239 None:intergenic 45.0%
TCTGGGTTTCCAGATAGATC+TGG - chr4_1:49068221-49068240 None:intergenic 45.0%
TCTATCTGGAAACCCAGATC+TGG + chr4_1:49068223-49068242 Msa0552440:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:49070129-49070148 Msa0552440:intron 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
! CACCTCATTCAGTTTTCACC+TGG + chr4_1:49068683-49068702 Msa0552440:intron 45.0%
CTCCAGGTGAAAACTGAATG+AGG - chr4_1:49070553-49070572 None:intergenic 45.0%
CTGATACAAACAACACCCCT+AGG - chr4_1:49069994-49070013 None:intergenic 45.0%
!! CTAGGGGTGTTGTTTGTATC+AGG + chr4_1:49070625-49070644 Msa0552440:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:49070960-49070979 Msa0552440:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:49070960-49070979 Msa0552440:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
! GCAGGGATGTTGTTTGTATC+AGG + chr4_1:49068437-49068456 Msa0552440:CDS 45.0%
GCAGGGGAATTGTATGTATC+AGG + chr4_1:49070960-49070979 Msa0552440:CDS 45.0%
!! GTAGGGGTGTTGTTTGTATC+AGG + chr4_1:49072452-49072471 Msa0552440:CDS 45.0%
!! ACAGGGGTGTTGTATGTATC+AGG + chr4_1:49072765-49072784 Msa0552440:CDS 45.0%
!! GTAGGGGTGTTGTTTGTATC+AGG + chr4_1:49072452-49072471 Msa0552440:CDS 45.0%
! TTTTGTAGGTCTGGATCGAG+GGG + chr4_1:49070129-49070148 Msa0552440:intron 45.0%
ACCTTGAAAAGTTGGGGGTA+GGG - chr4_1:49073962-49073981 None:intergenic 45.0%
AACCTTGAAAAGTTGGGGGT+AGG - chr4_1:49073963-49073982 None:intergenic 45.0%
CCCAAGCATTCACAAAAGCA+TGG - chr4_1:49075119-49075138 None:intergenic 45.0%
ACCCTAATCTACACGTGATC+TGG - chr4_1:49075193-49075212 None:intergenic 45.0%
CTTATTTGTGACACACTCCC+AGG - chr4_1:49075227-49075246 None:intergenic 45.0%
TACCGTGATCCCTAGAAATG+AGG + chr4_1:49075294-49075313 Msa0552440:intron 45.0%
! GTCCTCATTTCTAGGGATCA+CGG - chr4_1:49075299-49075318 None:intergenic 45.0%
AGACAAATCAGAACAGTGGG+TGG - chr4_1:49075321-49075340 None:intergenic 45.0%
CTAAGAAGTGGAAGAGGACT+TGG - chr4_1:49075367-49075386 None:intergenic 45.0%
CCCTAACTAAGAAGTGGAAG+AGG - chr4_1:49075373-49075392 None:intergenic 45.0%
!! GCTTTCTGGTTTCGTCCAAA+TGG + chr4_1:49075489-49075508 Msa0552440:intron 45.0%
GACCGTTCAAGAATTCGAAG+AGG - chr4_1:49075591-49075610 None:intergenic 45.0%
! CACCTGAAGCTTTGTGGTAT+TGG + chr4_1:49075610-49075629 Msa0552440:CDS 45.0%
TCCCAATACCACAAAGCTTC+AGG - chr4_1:49075615-49075634 None:intergenic 45.0%
GTGAATTCAGACTCGCAAGT+GGG - chr4_1:49075668-49075687 None:intergenic 45.0%
TGTGAATTCAGACTCGCAAG+TGG - chr4_1:49075669-49075688 None:intergenic 45.0%
ACTTGCGAGTCTGAATTCAC+AGG + chr4_1:49075668-49075687 Msa0552440:CDS 45.0%
CTTGCGAGTCTGAATTCACA+GGG + chr4_1:49075669-49075688 Msa0552440:CDS 45.0%
TGCTTGGCTGACATCATCAT+GGG - chr4_1:49075696-49075715 None:intergenic 45.0%
TTGCTTGGCTGACATCATCA+TGG - chr4_1:49075697-49075716 None:intergenic 45.0%
! ATGATGATGTCAGCCAAGCA+AGG + chr4_1:49075696-49075715 Msa0552440:CDS 45.0%
! CCATGTTATGTTGTGCCGTT+AGG - chr4_1:49075775-49075794 None:intergenic 45.0%
CCTAACGGCACAACATAACA+TGG + chr4_1:49075772-49075791 Msa0552440:intron 45.0%
AAAGTGGTTCAAGAGCAGCA+TGG - chr4_1:49075813-49075832 None:intergenic 45.0%
GGGTACGATGATGAAGAAAC+TGG - chr4_1:49075878-49075897 None:intergenic 45.0%
AAACAGGAAGATACCAGGAG+GGG - chr4_1:49075898-49075917 None:intergenic 45.0%
! TACCGGGACTTTTGAACTGA+TGG - chr4_1:49076364-49076383 None:intergenic 45.0%
TGGCCATACCTAATTGTGAC+TGG + chr4_1:49076702-49076721 Msa0552440:intron 45.0%
GCTTGCAATGCACTGTGTTA+AGG + chr4_1:49076790-49076809 Msa0552440:intron 45.0%
ACCTAACCTGTACAGCATGT+GGG - chr4_1:49076839-49076858 None:intergenic 45.0%
AACCTAACCTGTACAGCATG+TGG - chr4_1:49076840-49076859 None:intergenic 45.0%
! TGCTGTACAGGTTAGGTTGT+TGG + chr4_1:49076842-49076861 Msa0552440:intron 45.0%
ATAGGTCACATGTGAGCTGT+TGG + chr4_1:49076897-49076916 Msa0552440:intron 45.0%
AAGCGCGACATCTTTGTTAG+TGG + chr4_1:49076942-49076961 Msa0552440:intron 45.0%
ACATCTTTGTTAGTGGCAGC+AGG + chr4_1:49076949-49076968 Msa0552440:intron 45.0%
CCTCGGAACAAAATGATAGC+AGG - chr4_1:49077316-49077335 None:intergenic 45.0%
! CCTGCTATCATTTTGTTCCG+AGG + chr4_1:49077313-49077332 Msa0552440:intron 45.0%
ACAAGCAGTGCAATCCTGAT+TGG - chr4_1:49077531-49077550 None:intergenic 45.0%
AGGATTGCACTGCTTGTGTT+TGG + chr4_1:49077534-49077553 Msa0552440:intron 45.0%
TGTCTTCAAACACGACTCAC+GGG - chr4_1:49077590-49077609 None:intergenic 45.0%
GTGTCTTCAAACACGACTCA+CGG - chr4_1:49077591-49077610 None:intergenic 45.0%
AGAAACGCACGGGTAACAAA+CGG - chr4_1:49077646-49077665 None:intergenic 45.0%
GTTCATTCTGTTTGCAGCTC+TGG + chr4_1:49077741-49077760 Msa0552440:intron 45.0%
TTCTTGGCCACACAGAACTA+CGG + chr4_1:49077867-49077886 Msa0552440:CDS 45.0%
! TATGCAACCGTAGTTCTGTG+TGG - chr4_1:49077877-49077896 None:intergenic 45.0%
! CTTGCAAGTGCTATTGATGG+AGG - chr4_1:49077902-49077921 None:intergenic 45.0%
TTCAGCTGGCACTTCTTGAT+CGG + chr4_1:49077939-49077958 Msa0552440:CDS 45.0%
! GATCGGGAGTTTGATGATCT+AGG + chr4_1:49077956-49077975 Msa0552440:CDS 45.0%
ATCTCTTCCTCGGACATAGA+AGG - chr4_1:49078155-49078174 None:intergenic 45.0%
CGTCATACGGTAACATCAAG+TGG - chr4_1:49078671-49078690 None:intergenic 45.0%
TTCATTTAGTGTGGAGTGGC+AGG + chr4_1:49078736-49078755 Msa0552440:intron 45.0%
GCTCACTTGCAGTGTATGAT+TGG + chr4_1:49078845-49078864 Msa0552440:CDS 45.0%
AAACAGACCTGAAGCAAGGA+GGG - chr4_1:49078906-49078925 None:intergenic 45.0%
! TGAGAAGAAATCTGGAGCGT+TGG + chr4_1:49079102-49079121 Msa0552440:intron 45.0%
!! GAGCGTTGGCATCTAACATA+GGG + chr4_1:49079116-49079135 Msa0552440:intron 45.0%
TGTAGATACCTGACCTTGCA+TGG + chr4_1:49079527-49079546 Msa0552440:intron 45.0%
AATTTCGGCAGTTACACCTG+AGG + chr4_1:49080177-49080196 Msa0552440:three_prime_UTR 45.0%
! ATGTAGCCTCGAAGCTTTGT+AGG + chr4_1:49080205-49080224 Msa0552440:three_prime_UTR 45.0%
GTTTCACCTACAAAGCTTCG+AGG - chr4_1:49080214-49080233 None:intergenic 45.0%
GTAGGTGAAACAGAGATTGC+CGG + chr4_1:49080223-49080242 Msa0552440:three_prime_UTR 45.0%
TTTCACAAGAGCCTCGACTT+CGG - chr4_1:49080322-49080341 None:intergenic 45.0%
CACAACAAACCCGACATTCA+CGG + chr4_1:49080384-49080403 Msa0552440:three_prime_UTR 45.0%
ACAACAAACCCGACATTCAC+GGG + chr4_1:49080385-49080404 Msa0552440:three_prime_UTR 45.0%
TAAAGACTCCCGTGAATGTC+GGG - chr4_1:49080396-49080415 None:intergenic 45.0%
CGTTCCGCTTTATCATCACT+GGG - chr4_1:49080540-49080559 None:intergenic 45.0%
CCAGTGATGATAAAGCGGAA+CGG + chr4_1:49080538-49080557 Msa0552440:three_prime_UTR 45.0%
!! ATAAAAAAATATTTAAACAT+AGG - chr4_1:49072961-49072980 None:intergenic 5.0%
!! TTTATTCATATTATAAAATA+TGG - chr4_1:49080035-49080054 None:intergenic 5.0%
TGGGTTTCCAACCTAGACCT+GGG - chr4_1:49068074-49068093 None:intergenic 50.0%
TTGGGTTTCCAACCTAGACC+TGG - chr4_1:49068075-49068094 None:intergenic 50.0%
AAGTGCAAGTCGCCAGATCT+GGG - chr4_1:49068238-49068257 None:intergenic 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:49068742-49068761 Msa0552440:CDS 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:49068743-49068762 Msa0552440:CDS 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:49068744-49068763 Msa0552440:CDS 50.0%
TGGATCAAGGGACATGATGC+AGG + chr4_1:49068907-49068926 Msa0552440:CDS 50.0%
GGATCAAGGGACATGATGCA+GGG + chr4_1:49068908-49068927 Msa0552440:CDS 50.0%
GATCAAGGGACATGATGCAG+GGG + chr4_1:49068909-49068928 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGTTAC+AGG + chr4_1:49068925-49068944 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:49068742-49068761 Msa0552440:CDS 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:49068743-49068762 Msa0552440:CDS 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:49068744-49068763 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:49069992-49070011 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG + chr4_1:49070325-49070344 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
TGGATCGAGGGACAAAACCT+AGG + chr4_1:49070607-49070626 Msa0552440:CDS 50.0%
GGATCGAGGGACAAAACCTA+GGG + chr4_1:49070608-49070627 Msa0552440:CDS 50.0%
GATCGAGGGACAAAACCTAG+GGG + chr4_1:49070609-49070628 Msa0552440:CDS 50.0%
TAGATCGAGGGACTTGATGC+CGG + chr4_1:49071614-49071633 Msa0552440:intron 50.0%
GCCGGGGAATTGTATGTATC+AGG + chr4_1:49071632-49071651 Msa0552440:intron 50.0%
AGGGGACACATTGCATTGCA+GGG + chr4_1:49071786-49071805 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG + chr4_1:49070325-49070344 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGTATC+AGG + chr4_1:49068595-49068614 Msa0552440:intron 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:49068742-49068761 Msa0552440:CDS 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:49068743-49068762 Msa0552440:CDS 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:49068744-49068763 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGAATC+AGG + chr4_1:49070325-49070344 Msa0552440:CDS 50.0%
TGGATCGAGGGACAAAACGT+AGG + chr4_1:49068742-49068761 Msa0552440:CDS 50.0%
GGATCGAGGGACAAAACGTA+GGG + chr4_1:49068743-49068762 Msa0552440:CDS 50.0%
GATCGAGGGACAAAACGTAG+GGG + chr4_1:49068744-49068763 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTATGTTAG+AGG + chr4_1:49073065-49073084 Msa0552440:CDS 50.0%
! GCACGGGTGTTGTATGTATC+AGG + chr4_1:49073222-49073241 Msa0552440:CDS 50.0%
!! GCAGGGGTGTTGTTTGTATC+AGG + chr4_1:49069992-49070011 Msa0552440:CDS 50.0%
! GCAGGGATGTTGTTTGTCTC+AGG + chr4_1:49073554-49073573 Msa0552440:CDS 50.0%
! ACCCTACCCCCAACTTTTCA+AGG + chr4_1:49073958-49073977 Msa0552440:intron 50.0%
GTGCATAATCGCAGATGGGA+AGG - chr4_1:49074488-49074507 None:intergenic 50.0%
GTGGGTGGTCCTCATTTCTA+GGG - chr4_1:49075306-49075325 None:intergenic 50.0%
AGTGGGTGGTCCTCATTTCT+AGG - chr4_1:49075307-49075326 None:intergenic 50.0%
CATGGGCCCTAACTAAGAAG+TGG - chr4_1:49075379-49075398 None:intergenic 50.0%
AACGGTCACCTGAAGCTTTG+TGG + chr4_1:49075604-49075623 Msa0552440:CDS 50.0%
GCTTGGCTGACATCATCATG+GGG - chr4_1:49075695-49075714 None:intergenic 50.0%
TGTCAGCCAAGCAAGGTACA+AGG + chr4_1:49075703-49075722 Msa0552440:CDS 50.0%
GTCAGCCAAGCAAGGTACAA+GGG + chr4_1:49075704-49075723 Msa0552440:CDS 50.0%
AGGTACCCTTGTACCTTGCT+TGG - chr4_1:49075712-49075731 None:intergenic 50.0%
GCCTCCATCAATCTGCCTAA+CGG + chr4_1:49075757-49075776 Msa0552440:intron 50.0%
! TGTGCCGTTAGGCAGATTGA+TGG - chr4_1:49075764-49075783 None:intergenic 50.0%
! GCTTTGCAGGTTCGGGTTTA+CGG + chr4_1:49076646-49076665 Msa0552440:intron 50.0%
ACAATGCCCACATGCTGTAC+AGG + chr4_1:49076830-49076849 Msa0552440:intron 50.0%
TGTTACCCGTGCGTTTCTTG+TGG + chr4_1:49077648-49077667 Msa0552440:CDS 50.0%
TCCTACCACAAGAAACGCAC+GGG - chr4_1:49077656-49077675 None:intergenic 50.0%
CTCCTACCACAAGAAACGCA+CGG - chr4_1:49077657-49077676 None:intergenic 50.0%
! GTAGTTCTGTGTGGCCAAGA+AGG - chr4_1:49077868-49077887 None:intergenic 50.0%
! CGGCTTGCAAGTGCTATTGA+TGG - chr4_1:49077905-49077924 None:intergenic 50.0%
TCAATAGCACTTGCAAGCCG+AGG + chr4_1:49077905-49077924 Msa0552440:CDS 50.0%
CAATAGCACTTGCAAGCCGA+GGG + chr4_1:49077906-49077925 Msa0552440:CDS 50.0%
TCAGCTGGCACTTCTTGATC+GGG + chr4_1:49077940-49077959 Msa0552440:CDS 50.0%
TACTGCACCTTCTATGTCCG+AGG + chr4_1:49078145-49078164 Msa0552440:CDS 50.0%
TCGTTTGTGGCAGAAGACAC+AGG + chr4_1:49078779-49078798 Msa0552440:intron 50.0%
GCAAGTGAGCTCATCATCAG+AGG - chr4_1:49078835-49078854 None:intergenic 50.0%
GAAACAGACCTGAAGCAAGG+AGG - chr4_1:49078907-49078926 None:intergenic 50.0%
!! GGAGCGTTGGCATCTAACAT+AGG + chr4_1:49079115-49079134 Msa0552440:intron 50.0%
! AGGCTAGTTGCATTGATCCC+TGG + chr4_1:49079801-49079820 Msa0552440:CDS 50.0%
CGAGGCTACATACAATCCTC+AGG - chr4_1:49080196-49080215 None:intergenic 50.0%
CTATGCACTAGTCCCGTTTC+TGG - chr4_1:49080296-49080315 None:intergenic 50.0%
!! CGTGAATGTCGGGTTTGTTG+TGG - chr4_1:49080386-49080405 None:intergenic 50.0%
CCGTTCCGCTTTATCATCAC+TGG - chr4_1:49080541-49080560 None:intergenic 50.0%
GCGTGCAAGTACAGCCACTT+AGG - chr4_1:49068001-49068020 None:intergenic 55.0%
GAAGTGCAAGTCGCCAGATC+TGG - chr4_1:49068239-49068258 None:intergenic 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:49070142-49070161 Msa0552440:CDS 55.0%
AAGATCGAGGGACACGATGC+AGG + chr4_1:49071276-49071295 Msa0552440:CDS 55.0%
AGATCGAGGGACACGATGCA+GGG + chr4_1:49071277-49071296 Msa0552440:CDS 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:49070142-49070161 Msa0552440:CDS 55.0%
AGATCGAGGGACTTGATGCC+GGG + chr4_1:49071615-49071634 Msa0552440:intron 55.0%
GAGGGGACACATTGCATTGC+AGG + chr4_1:49071785-49071804 Msa0552440:CDS 55.0%
TAGATCGAGGGACACGATGC+AGG + chr4_1:49071955-49071974 Msa0552440:CDS 55.0%
AGATCGAGGGACACGATGCA+GGG + chr4_1:49071277-49071296 Msa0552440:CDS 55.0%
GGTTCGAGGGACACGATACA+GGG + chr4_1:49072748-49072767 Msa0552440:CDS 55.0%
GTTCGAGGGACACGATACAG+GGG + chr4_1:49072749-49072768 Msa0552440:CDS 55.0%
TGGATCAAGGGACACGATGC+AGG + chr4_1:49073047-49073066 Msa0552440:CDS 55.0%
GGATCAAGGGACACGATGCA+GGG + chr4_1:49073048-49073067 Msa0552440:CDS 55.0%
GATCAAGGGACACGATGCAG+GGG + chr4_1:49073049-49073068 Msa0552440:CDS 55.0%
GATCGAGGGGACACATTGCA+GGG + chr4_1:49070142-49070161 Msa0552440:CDS 55.0%
! ATGGAAAGGCGGCAAGTTGG+AGG - chr4_1:49074097-49074116 None:intergenic 55.0%
CAGATGGAAAGGCGGCAAGT+TGG - chr4_1:49074100-49074119 None:intergenic 55.0%
GCCGTTAGGCAGATTGATGG+AGG - chr4_1:49075761-49075780 None:intergenic 55.0%
CTTCATCATCGTACCCCTCC+TGG + chr4_1:49075882-49075901 Msa0552440:intron 55.0%
GCCCACATGCTGTACAGGTT+AGG + chr4_1:49076835-49076854 Msa0552440:intron 55.0%
ACCCGTGCGTTTCTTGTGGT+AGG + chr4_1:49077652-49077671 Msa0552440:intron 55.0%
CGTGCGTTTCTTGTGGTAGG+AGG + chr4_1:49077655-49077674 Msa0552440:intron 55.0%
! TTGCAGCTCTGGCTAGTGCT+TGG + chr4_1:49077752-49077771 Msa0552440:intron 55.0%
! TAGCTTGCCCTCCTTGCTTC+AGG + chr4_1:49078896-49078915 Msa0552440:CDS 55.0%
! GTTGCATTGATCCCTGGCTG+CGG + chr4_1:49079807-49079826 Msa0552440:CDS 55.0%
CTGCGGCAACAAGGGATTTG+CGG + chr4_1:49079824-49079843 Msa0552440:CDS 55.0%
GTGCATAGAAGCCGAAGTCG+AGG + chr4_1:49080308-49080327 Msa0552440:three_prime_UTR 55.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:49070141-49070160 Msa0552440:CDS 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GATCGAGGGGACGCATTGCA+GGG + chr4_1:49070774-49070793 Msa0552440:CDS 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GAACGAGGGGACGCATTGCA+GGG + chr4_1:49071108-49071127 Msa0552440:CDS 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:49070141-49070160 Msa0552440:CDS 60.0%
GATCGAGGGACTTGATGCCG+GGG + chr4_1:49071616-49071635 Msa0552440:intron 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
TGGATCGAGGGACACGATGC+AGG + chr4_1:49068419-49068438 Msa0552440:exon 60.0%
GGATCGAGGGACACGATGCA+GGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAG+GGG + chr4_1:49068421-49068440 Msa0552440:exon 60.0%
CGGTTCGAGGGACACGATAC+AGG + chr4_1:49072747-49072766 Msa0552440:CDS 60.0%
GGATCGAGGGACACGATGCA+CGG + chr4_1:49068420-49068439 Msa0552440:exon 60.0%
GATCGAGGGACACGATGCAC+GGG + chr4_1:49073206-49073225 Msa0552440:CDS 60.0%
TGGATCCAGGGACACGATGC+AGG + chr4_1:49073369-49073388 Msa0552440:CDS 60.0%
GGATCCAGGGACACGATGCA+GGG + chr4_1:49073370-49073389 Msa0552440:CDS 60.0%
GATCCAGGGACACGATGCAG+GGG + chr4_1:49073371-49073390 Msa0552440:CDS 60.0%
GGATCGAGGGGACACATTGC+AGG + chr4_1:49070141-49070160 Msa0552440:CDS 60.0%
GGCTGCTGCTGCATGAGCTT+GGG - chr4_1:49077840-49077859 None:intergenic 60.0%
! GCTGAAGTCTGAGACGCCCT+CGG - chr4_1:49077925-49077944 None:intergenic 60.0%
! AGGGCGTCTCAGACTTCAGC+TGG + chr4_1:49077925-49077944 Msa0552440:CDS 60.0%
GGCACACACCATGCAAGGTC+AGG - chr4_1:49079538-49079557 None:intergenic 60.0%
ATCCCTGGCTGCGGCAACAA+GGG + chr4_1:49079816-49079835 Msa0552440:CDS 60.0%
ATCCCTTGTTGCCGCAGCCA+GGG - chr4_1:49079821-49079840 None:intergenic 60.0%
AATCCCTTGTTGCCGCAGCC+AGG - chr4_1:49079822-49079841 None:intergenic 60.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
GGATCGAGGGGACGCATTGC+AGG + chr4_1:49070773-49070792 Msa0552440:CDS 65.0%
GGAACGAGGGGACGCATTGC+AGG + chr4_1:49071107-49071126 Msa0552440:CDS 65.0%
CGGATCGAGGGACACGATGC+AGG + chr4_1:49069056-49069075 Msa0552440:intron 65.0%
ACACCCCTGCATCGTGTCCC+TGG - chr4_1:49068585-49068604 None:intergenic 65.0%
! GGGGAGGCACACACCATGCA+AGG - chr4_1:49079543-49079562 None:intergenic 65.0%
GATCCCTGGCTGCGGCAACA+AGG + chr4_1:49079815-49079834 Msa0552440:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 49067860 49080671 49067860 ID=Msa0552440;Name=Msa0552440
chr4_1 mRNA 49067860 49080671 49067860 ID=Msa0552440-mRNA-1;Parent=Msa0552440;Name=Msa0552440-mRNA-1;_AED=0.23;_eAED=0.23;_QI=304|0.54|0.64|0.88|0.24|0.38|34|805|737
chr4_1 exon 49067860 49068144 49067860 ID=Msa0552440-mRNA-1:exon:13555;Parent=Msa0552440-mRNA-1
chr4_1 exon 49068416 49068458 49068416 ID=Msa0552440-mRNA-1:exon:13556;Parent=Msa0552440-mRNA-1
chr4_1 exon 49068708 49068781 49068708 ID=Msa0552440-mRNA-1:exon:13557;Parent=Msa0552440-mRNA-1
chr4_1 exon 49068904 49068946 49068904 ID=Msa0552440-mRNA-1:exon:13558;Parent=Msa0552440-mRNA-1
chr4_1 exon 49069622 49069692 49069622 ID=Msa0552440-mRNA-1:exon:13559;Parent=Msa0552440-mRNA-1
chr4_1 exon 49069771 49069848 49069771 ID=Msa0552440-mRNA-1:exon:13560;Parent=Msa0552440-mRNA-1
chr4_1 exon 49069971 49070013 49069971 ID=Msa0552440-mRNA-1:exon:13561;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070137 49070180 49070137 ID=Msa0552440-mRNA-1:exon:13562;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070304 49070346 49070304 ID=Msa0552440-mRNA-1:exon:13563;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070438 49070481 49070438 ID=Msa0552440-mRNA-1:exon:13564;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070560 49070646 49070560 ID=Msa0552440-mRNA-1:exon:13565;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070769 49070812 49070769 ID=Msa0552440-mRNA-1:exon:13566;Parent=Msa0552440-mRNA-1
chr4_1 exon 49070939 49070981 49070939 ID=Msa0552440-mRNA-1:exon:13567;Parent=Msa0552440-mRNA-1
chr4_1 exon 49071103 49071146 49071103 ID=Msa0552440-mRNA-1:exon:13568;Parent=Msa0552440-mRNA-1
chr4_1 exon 49071273 49071315 49071273 ID=Msa0552440-mRNA-1:exon:13569;Parent=Msa0552440-mRNA-1
chr4_1 exon 49071440 49071483 49071440 ID=Msa0552440-mRNA-1:exon:13570;Parent=Msa0552440-mRNA-1
chr4_1 exon 49071776 49071824 49071776 ID=Msa0552440-mRNA-1:exon:13571;Parent=Msa0552440-mRNA-1
chr4_1 exon 49071952 49071994 49071952 ID=Msa0552440-mRNA-1:exon:13572;Parent=Msa0552440-mRNA-1
chr4_1 exon 49072251 49072308 49072251 ID=Msa0552440-mRNA-1:exon:13573;Parent=Msa0552440-mRNA-1
chr4_1 exon 49072431 49072473 49072431 ID=Msa0552440-mRNA-1:exon:13574;Parent=Msa0552440-mRNA-1
chr4_1 exon 49072596 49072638 49072596 ID=Msa0552440-mRNA-1:exon:13575;Parent=Msa0552440-mRNA-1
chr4_1 exon 49072729 49072786 49072729 ID=Msa0552440-mRNA-1:exon:13576;Parent=Msa0552440-mRNA-1
chr4_1 exon 49072909 49072951 49072909 ID=Msa0552440-mRNA-1:exon:13577;Parent=Msa0552440-mRNA-1
chr4_1 exon 49073044 49073086 49073044 ID=Msa0552440-mRNA-1:exon:13578;Parent=Msa0552440-mRNA-1
chr4_1 exon 49073157 49073243 49073157 ID=Msa0552440-mRNA-1:exon:13579;Parent=Msa0552440-mRNA-1
chr4_1 exon 49073335 49073408 49073335 ID=Msa0552440-mRNA-1:exon:13580;Parent=Msa0552440-mRNA-1
chr4_1 exon 49073532 49073575 49073532 ID=Msa0552440-mRNA-1:exon:13581;Parent=Msa0552440-mRNA-1
chr4_1 exon 49075574 49075725 49075574 ID=Msa0552440-mRNA-1:exon:13582;Parent=Msa0552440-mRNA-1
chr4_1 exon 49076852 49076894 49076852 ID=Msa0552440-mRNA-1:exon:13583;Parent=Msa0552440-mRNA-1
chr4_1 exon 49077536 49077669 49077536 ID=Msa0552440-mRNA-1:exon:13584;Parent=Msa0552440-mRNA-1
chr4_1 exon 49077758 49077977 49077758 ID=Msa0552440-mRNA-1:exon:13585;Parent=Msa0552440-mRNA-1
chr4_1 exon 49078105 49078219 49078105 ID=Msa0552440-mRNA-1:exon:13586;Parent=Msa0552440-mRNA-1
chr4_1 exon 49078792 49078917 49078792 ID=Msa0552440-mRNA-1:exon:13587;Parent=Msa0552440-mRNA-1
chr4_1 exon 49079797 49080671 49079797 ID=Msa0552440-mRNA-1:exon:13588;Parent=Msa0552440-mRNA-1
chr4_1 five_prime_UTR 49067860 49068144 49067860 ID=Msa0552440-mRNA-1:five_prime_utr;Parent=Msa0552440-mRNA-1
chr4_1 five_prime_UTR 49068416 49068434 49068416 ID=Msa0552440-mRNA-1:five_prime_utr;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49068435 49068458 49068435 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49068708 49068781 49068708 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49068904 49068946 49068904 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49069622 49069692 49069622 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49069771 49069848 49069771 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49069971 49070013 49069971 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070137 49070180 49070137 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070304 49070346 49070304 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070438 49070481 49070438 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070560 49070646 49070560 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070769 49070812 49070769 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49070939 49070981 49070939 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49071103 49071146 49071103 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49071273 49071315 49071273 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49071440 49071483 49071440 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49071776 49071824 49071776 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49071952 49071994 49071952 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49072251 49072308 49072251 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49072431 49072473 49072431 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49072596 49072638 49072596 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49072729 49072786 49072729 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49072909 49072951 49072909 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49073044 49073086 49073044 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49073157 49073243 49073157 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49073335 49073408 49073335 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49073532 49073575 49073532 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49075574 49075725 49075574 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49076852 49076894 49076852 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49077536 49077669 49077536 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49077758 49077977 49077758 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49078105 49078219 49078105 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49078792 49078917 49078792 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 CDS 49079797 49079866 49079797 ID=Msa0552440-mRNA-1:cds;Parent=Msa0552440-mRNA-1
chr4_1 three_prime_UTR 49079867 49080671 49079867 ID=Msa0552440-mRNA-1:three_prime_utr;Parent=Msa0552440-mRNA-1
Gene Sequence

>Msa0552440

ATGCAGGGATGTTGTTTGTATCAGAAAATTATAACATTTATTCCGAATTTCATAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTTTATCAGTTCTGGATCAAGGGACATGATGCAGGGGTGTTGTATGTTACAGTTTTCACCTGTAGAAAATTATAACATTTATTCGGATCGAGGGACACGATGCAGGGGTGTTGTATGTATCAGTTTTCACCTGTTAACATTTATTCCGAATTTTGTAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTTTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTATGAATCAGAAAATTATAACATTTACACGATGCAGGGGTGTTGTATGTATCAGTTTTCACCTGGAGAAAATTATAACATTTATTCCGAATTTTGTAGTTCTGGATCGAGGGACAAAACCTAGGGGTGTTGTTTGTATCAGTTCTGGATCGAGGGGACGCATTGCAGGGATGTTGTTTGTATCAGTTCTGGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGTTCTGGAACGAGGGGACGCATTGCAGGGATGTTGTTTGTATCAGTTCAAGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGTTATGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTATCAGTTATGGATCGAGGGGACACATTGCATTGCAGGGATGTTGTTTGTATCAGTTCTAGATCGAGGGACACGATGCAGGGGAATTGTATGTATCAGAAAATTATAACATTTATTCGGATCGAGGGACACGATGCAGGGGTGTTGTATGTATCAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTGTATCAGTTCTGGATCGAGGGACACGATGCAGGGGTGTTGTATGAATCAGAAAATTATAACATTTATTCGGTTCGAGGGACACGATACAGGGGTGTTGTATGTATCAGTTCTGGATCGAGGGACAAAACGTAGGGGTGTTGTTTGTATCAGTTCTGGATCAAGGGACACGATGCAGGGGTGTTGTATGTTAGAGTTTTCACCTGTACAAAATTATAACATTTATTCCGCATTTTGTAGTTCTGGATCGAGGGACACGATGCACGGGTGTTGTATGTATCAGAAAATTATAACATTTATTCCGAATTTTGTAGTTCTGGATCCAGGGACACGATGCAGGGGTGTTGTTTGTATCAGGTCTGGATCGAGGGGACACATTGCAGGGATGTTGTTTGTCTCAGCACTGAAGTTATTGCCTCTTCGAATTCTTGAACGGTCACCTGAAGCTTTGTGGTATTGGGAAGCTGCATATTTTCACAATCGTAGAATACTCCCACTTGCGAGTCTGAATTCACAGGGCCCCATGATGATGTCAGCCAAGCAAGGTACAAGGGTTAGGTTGTTGGAATCAGAAGGTAGAAGTTGTATTGGAGTCGGATTGCACTGCTTGTGTTTGGAGACTTCCAGATATGGGCTATATCTGATGGCCCGTGAGTCGTGTTTGAAGACACTTGAAGGGCACATTTCAAGTGTGTTAACAGCACCGTTTGTTACCCGTGCGTTTCTTGTGCTCTGGCTAGTGCTTGGTGTTTTCTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAAGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGCCACACAGAACTACGGTTGCATATGCCTCCATCAATAGCACTTGCAAGCCGAGGGCGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCTATGTCCGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCCCAAAAAAGACACAGGATAATTCAAATGCGGTTGGAAACTCAAAAGCCTCTGATGATGAGCTCACTTGCAGTGTATGATTGGAGCAAGTTTATGTTGGAGATGTACTTCGTAGCTTGCCCTCCTTGCTTCAGTCTCAGGCTAGTTGCATTGATCCCTGGCTGCGGCAACAAGGGATTTGCGGTTTTTATACTGAGATTATGA
Protein sequence

>Msa0552440

MQGCCLYQKIITFIPNFIVLDRGTKRRGVVFISSGSRDMMQGCCMLQFSPVENYNIYSDRGTRCRGVVCISFHLLTFIPNFVVLDRGTKRRGVVFISSGSRDTMQGCCLYQVWIEGTHCRDVVCISSGSRDTMQGCCMNQKIITFTRCRGVVCISFHLEKIITFIPNFVVLDRGTKPRGVVCISSGSRGRIAGMLFVSVLDRGTRCRGIVCISSGTRGRIAGMLFVSVQDRGTRCRGIVCISYGSRGHIAGMLFVSVMDRGDTLHCRDVVCISSRSRDTMQGNCMYQKIITFIRIEGHDAGVLYVSVLDRGTKRRGVVCISSGSRDTMQGCCMNQKIITFIRFEGHDTGVLYVSVLDRGTKRRGVVCISSGSRDTMQGCCMLEFSPVQNYNIYSAFCSSGSRDTMHGCCMYQKIITFIPNFVVLDPGTRCRGVVCIRSGSRGHIAGMLFVSALKLLPLRILERSPEALWYWEAAYFHNRRILPLASLNSQGPMMMSAKQGTRVRLLESEGRSCIGVGLHCLCLETSRYGLYLMARESCLKTLEGHISSVLTAPFVTRAFLVLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMSEEEINALPVHKYKVSGPQKRHRIIQMRLETQKPLMMSSLAVYDWSKFMLEMYFVACPPCFSLRLVALIPGCGNKGFAVFILRL*