AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0559460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0559460 MtrunA17_Chr4g0049411 96.388 526 19 0 5 530 4 529 0.0 1037
Msa0559460 MtrunA17_Chr3g0141051 65.649 524 166 3 10 530 19 531 0.0 697
Msa0559460 MtrunA17_Chr5g0428201 70.108 465 137 2 63 525 73 537 0.0 671
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0559460 AT1G58290.1 71.150 461 126 3 65 522 79 535 0.0 664
Msa0559460 AT1G09940.1 70.236 467 132 4 63 527 68 529 0.0 658
Msa0559460 AT2G31250.1 61.505 465 166 7 68 527 67 523 0.0 542

Find 164 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGGTGCATTTGGGAATTT+TGG 0.112763 4_1:-58644336 None:intergenic
GATGCTAGGGTGTTGGTAAT+TGG 0.178842 4_1:+58645394 Msa0559460:CDS
GGTCTTGACTCCCTTGTTCT+TGG 0.227585 4_1:+58645160 Msa0559460:CDS
TTGACGTGTTAAATTCAGTA+TGG 0.264009 4_1:-58646374 None:intergenic
ATGCTAGGGTGTTGGTAATT+GGG 0.270117 4_1:+58645395 Msa0559460:CDS
TCAGATCTTGTTGTATAATA+AGG 0.278776 4_1:+58645105 Msa0559460:CDS
TGGGGAGGGAATGTGGATTT+AGG 0.284186 4_1:-58644293 None:intergenic
AGCAATGTATGCCCTTAGTA+TGG 0.288199 4_1:+58645993 Msa0559460:CDS
GTTAAACAAGTTGTTAAATC+TGG 0.297055 4_1:+58645205 Msa0559460:CDS
ACTTGAGGCCACTGAGCTTC+TGG 0.297366 4_1:-58644625 None:intergenic
GGGAAGAGTGGCGGTGGAGG+AGG 0.297442 4_1:-58644240 None:intergenic
TTATAGAGATGAGGTTGATA+TGG 0.305491 4_1:+58646399 Msa0559460:three_prime_UTR
GAAGCTAGTGATTAAACATT+TGG 0.322618 4_1:+58645432 Msa0559460:CDS
ATCAGAACGAAGGGTGCATT+TGG 0.332400 4_1:-58644345 None:intergenic
GGAGGGAAGAGTGGCGGTGG+AGG 0.337458 4_1:-58644243 None:intergenic
AAGCGTTCAGAGTCTTCTTT+TGG 0.341676 4_1:+58645370 Msa0559460:CDS
GGTAATTGGGGCAGGGAAGA+TGG 0.349586 4_1:+58645408 Msa0559460:CDS
ATCGTTGGTTTGGTTTGGTT+TGG 0.358493 4_1:-58644015 None:intergenic
GGAAGCACGGGGAATTATTC+AGG 0.359513 4_1:+58645819 Msa0559460:CDS
GCTCTAAATTTCTTAATAGT+AGG 0.365495 4_1:-58645889 None:intergenic
TCAGTGGCCTCAAGTTATTC+AGG 0.365530 4_1:+58644633 Msa0559460:CDS
GGCTATCTCTGTTGGAAAAC+GGG 0.366509 4_1:+58645276 Msa0559460:CDS
ACAATATCGTTGGTTTGGTT+TGG 0.386818 4_1:-58644020 None:intergenic
GTAATTGGGGCAGGGAAGAT+GGG 0.387293 4_1:+58645409 Msa0559460:CDS
ATTAAACATTTGGTTGCTAA+AGG 0.398912 4_1:+58645442 Msa0559460:CDS
ACATGACAATATCGTTGGTT+TGG 0.401419 4_1:-58644025 None:intergenic
AGTTTCTCGCGCATCTCAAC+AGG 0.404341 4_1:-58644595 None:intergenic
AAGAGCAGCATAATTGTGAT+TGG 0.413113 4_1:+58644553 Msa0559460:CDS
AAGAGAAAGTCAATGCCATT+AGG 0.420004 4_1:+58645497 Msa0559460:CDS
CTTCTCACACCTTGGCCAAC+CGG 0.420234 4_1:-58645658 None:intergenic
GATTGCAAGGGAAGGAAGGA+AGG 0.421934 4_1:-58644192 None:intergenic
AGTAATAAATAATTTATGAA+TGG 0.422544 4_1:-58644105 None:intergenic
ACGCCTGGATCCACGTTCCT+TGG 0.425824 4_1:-58645706 None:intergenic
AAGGAAGGAAGGAGTGTGAT+CGG 0.425920 4_1:-58644181 None:intergenic
TATAGAGATGAGGTTGATAT+GGG 0.433896 4_1:+58646400 Msa0559460:three_prime_UTR
GACTCCCTTGTTCTTGGAGA+AGG 0.433930 4_1:+58645166 Msa0559460:CDS
ACAGAGACTAACATTTCGTC+TGG 0.438749 4_1:+58645304 Msa0559460:CDS
GATCTCGAGAGGAGAAGGTT+TGG 0.440833 4_1:-58644396 None:intergenic
CTCAAGCAGGCTATCTCTGT+TGG 0.440868 4_1:+58645268 Msa0559460:CDS
GCAATCTCAATGGCGGCTGC+AGG 0.442620 4_1:+58644209 Msa0559460:exon
GGTTTGGTTTGGTTTGGTAA+TGG 0.443405 4_1:-58644009 None:intergenic
ATCTCAATGGCGGCTGCAGG+TGG 0.446675 4_1:+58644212 Msa0559460:exon
TGAGACGGAAATATCATTGA+TGG 0.449585 4_1:+58646134 Msa0559460:CDS
TCCTTCCCTTGCAATCTCAA+TGG 0.451770 4_1:+58644199 Msa0559460:exon
ATTGTGAATAAGCTACTTCA+TGG 0.456488 4_1:+58646018 Msa0559460:CDS
AGGCTATCTCTGTTGGAAAA+CGG 0.456584 4_1:+58645275 Msa0559460:CDS
TTAAACATTTGGTTGCTAAA+GGG 0.458547 4_1:+58645443 Msa0559460:CDS
ATCCTTCAACTCCTTCCTAA+TGG 0.459263 4_1:-58645512 None:intergenic
TCAGAACGAAGGGTGCATTT+GGG 0.463289 4_1:-58644344 None:intergenic
AAATCTGGACAAGGGGTGCC+AGG 0.464157 4_1:+58645220 Msa0559460:CDS
GAGTCGATGGGGAGGGAATG+TGG 0.465485 4_1:-58644300 None:intergenic
TGCCATTAGGAAGGAGTTGA+AGG 0.465860 4_1:+58645510 Msa0559460:CDS
GTAATAAATAATTTATGAAT+GGG 0.470375 4_1:-58644104 None:intergenic
TAATTGGGGCAGGGAAGATG+GGG 0.470519 4_1:+58645410 Msa0559460:CDS
TAGACCTCTTTCTGATATGA+TGG 0.471217 4_1:+58645549 Msa0559460:CDS
AGGAAGGAAGGAGTGTGATC+GGG 0.472398 4_1:-58644180 None:intergenic
TTCTCAAGTTCCGACACGCC+TGG 0.475568 4_1:-58645721 None:intergenic
TGGGAATGGGTCGGTGATGT+AGG 0.476101 4_1:+58643967 None:intergenic
GGAGGAGGGAAGAGTGGCGG+TGG 0.476461 4_1:-58644246 None:intergenic
GGAGGAATTGAATACATTTG+AGG 0.476494 4_1:+58645840 Msa0559460:CDS
TATTCACAATACCCATACTA+AGG 0.478653 4_1:-58646005 None:intergenic
AGAAAAGATCAGAGTCAAGA+TGG 0.484888 4_1:+58646158 Msa0559460:CDS
AATTTAGAGCTTATGTTGAA+AGG 0.485422 4_1:+58645902 Msa0559460:CDS
ATCATTTCATGCCATTCCCA+TGG 0.485449 4_1:+58646227 Msa0559460:three_prime_UTR
TTTCTTACTGTCAGCTGAAG+AGG 0.489860 4_1:-58644426 None:intergenic
TTCTGTTAGTTCAGCTGCTG+TGG 0.490414 4_1:+58645333 Msa0559460:CDS
TGCTAGGGTGTTGGTAATTG+GGG 0.492079 4_1:+58645396 Msa0559460:CDS
GAACGTGGAGATTCTTCCTC+CGG 0.497442 4_1:+58645639 Msa0559460:CDS
TGACGTGTTAAATTCAGTAT+GGG 0.499841 4_1:-58646373 None:intergenic
AGGGTGTTGGTAATTGGGGC+AGG 0.500166 4_1:+58645400 Msa0559460:CDS
ATTCCAAGGAACGTGGATCC+AGG 0.507096 4_1:+58645703 Msa0559460:CDS
AAGAAACATGACAATATCGT+TGG 0.507202 4_1:-58644030 None:intergenic
GCAAGGAATAGTTAGTAGCT+AGG 0.511865 4_1:-58644128 None:intergenic
AGGTGAAAATTTGACGGAGG+AGG 0.517351 4_1:-58644261 None:intergenic
GAGGCTGATGTGATCTTCAC+TGG 0.518849 4_1:+58645583 Msa0559460:CDS
TAGTTCAGCTGCTGTGGAGT+TGG 0.523446 4_1:+58645339 Msa0559460:CDS
AAGGATTAGAGCTTCTGAGC+TGG 0.524082 4_1:+58645921 Msa0559460:CDS
ACAGAAAGCTATGGAAGCAC+GGG 0.524843 4_1:+58645807 Msa0559460:CDS
GACTAACATTTCGTCTGGGT+CGG 0.525209 4_1:+58645309 Msa0559460:CDS
AATAAGTGGTTTGCTCAAGC+AGG 0.526192 4_1:+58645255 Msa0559460:CDS
ATCTGATGTTTAGAAATCTC+AGG 0.527073 4_1:-58645088 None:intergenic
TTGGCCAAGGTGTGAGAAGA+CGG 0.528492 4_1:+58645662 Msa0559460:CDS
TTAAGGATCTCGAGAGGAGA+AGG 0.534319 4_1:-58644401 None:intergenic
TTGAGCAGGTGAAAATTTGA+CGG 0.538274 4_1:-58644267 None:intergenic
CTTGCAGTTGCAGCCACCAT+GGG 0.538624 4_1:-58646243 None:intergenic
TACTATTGTAATGTACAAGA+TGG 0.543267 4_1:-58646271 None:intergenic
GTGTTAGAGAAGTCACTGAT+TGG 0.544478 4_1:+58644749 Msa0559460:CDS
ATGAATGAATTAAGAATGCA+AGG 0.545249 4_1:-58644145 None:intergenic
GGATAGACAACAGAAAGCTA+TGG 0.551254 4_1:+58645798 Msa0559460:CDS
CATTCCATCATATCAGAAAG+AGG 0.552097 4_1:-58645553 None:intergenic
CAGCCGCCATTGAGATTGCA+AGG 0.553091 4_1:-58644205 None:intergenic
GGTGAAAATTTGACGGAGGA+GGG 0.557302 4_1:-58644260 None:intergenic
ATTCTTCCTCCGGTTGGCCA+AGG 0.557516 4_1:+58645649 Msa0559460:CDS
GTGGAGATTCTTCCTCCGGT+TGG 0.559100 4_1:+58645643 Msa0559460:CDS
AACAGAAAGCTATGGAAGCA+CGG 0.561734 4_1:+58645806 Msa0559460:CDS
GCTTGCAGTTGCAGCCACCA+TGG 0.562243 4_1:-58646244 None:intergenic
GAAAAGATCAGAGTCAAGAT+GGG 0.562597 4_1:+58646159 Msa0559460:CDS
CAAGTTGTTAAATCTGGACA+AGG 0.563618 4_1:+58645211 Msa0559460:CDS
GGGTGTTAAAAGAGAGTCGA+TGG 0.563812 4_1:-58644313 None:intergenic
ATGGTCCTATGCAGCATCTG+AGG 0.564451 4_1:+58646037 Msa0559460:CDS
GAAAGTCAATGCCATTAGGA+AGG 0.565681 4_1:+58645501 Msa0559460:CDS
TTGAGATTGCAAGGGAAGGA+AGG 0.569159 4_1:-58644196 None:intergenic
TCACACCTCAGATGCTGCAT+AGG 0.570792 4_1:-58646042 None:intergenic
TAAAAGAGAGTCGATGGGGA+GGG 0.571739 4_1:-58644307 None:intergenic
ATGCAGCATCTGAGGTGTGA+TGG 0.572614 4_1:+58646045 Msa0559460:CDS
TCGTTGATATATCTATTCCA+AGG 0.575192 4_1:+58645689 Msa0559460:CDS
GTGGATTTAGGAAATTGAGC+AGG 0.575666 4_1:-58644281 None:intergenic
GCAATGTATGCCCTTAGTAT+GGG 0.576353 4_1:+58645994 Msa0559460:CDS
AGTTGCAGCCACCATGGGAA+TGG 0.577781 4_1:-58646238 None:intergenic
CATCTGTTTGAAGTAGCTGC+TGG 0.577887 4_1:+58645139 Msa0559460:CDS
AGAAGTTGTTGATGCTAACA+AGG 0.578083 4_1:+58645774 Msa0559460:CDS
ATTTCATGCCATTCCCATGG+TGG 0.578728 4_1:+58646230 Msa0559460:three_prime_UTR
ATGTTTAGAAATCTCAGGTA+CGG 0.580762 4_1:-58645083 None:intergenic
GACGTGTTAAATTCAGTATG+GGG 0.581110 4_1:-58646372 None:intergenic
AAATAATTTATGAATGGGCG+CGG 0.582597 4_1:-58644099 None:intergenic
TTAAAAGAGAGTCGATGGGG+AGG 0.584069 4_1:-58644308 None:intergenic
TTTGACCTTCTCCAAGAACA+AGG 0.584511 4_1:-58645171 None:intergenic
TGCAGCATCTGAGGTGTGAT+GGG 0.584786 4_1:+58646046 Msa0559460:CDS
GATGCGTGGTGACGTCTCGA+AGG 0.587941 4_1:+58645960 Msa0559460:CDS
AATTGAATACATTTGAGGCG+TGG 0.589108 4_1:+58645845 Msa0559460:CDS
GCCATTGAGATTGCAAGGGA+AGG 0.589122 4_1:-58644200 None:intergenic
TTTGACGGAGGAGGGAAGAG+TGG 0.600481 4_1:-58644252 None:intergenic
TCACACTCCGCATGACGAGA+TGG 0.607110 4_1:+58646438 Msa0559460:three_prime_UTR
AAGGGGATTATCAGAACGAA+GGG 0.610103 4_1:-58644354 None:intergenic
TAACACCGCGGTGTTGAGAG+AGG 0.614922 4_1:-58644732 None:intergenic
AACACCGCGGTGTTGAGAGA+GGG 0.615162 4_1:-58644731 None:intergenic
AGAGCCGTCTTCTCACACCT+TGG 0.615615 4_1:-58645666 None:intergenic
ACGTCAAATTTATAGAGATG+AGG 0.617422 4_1:+58646390 Msa0559460:three_prime_UTR
GACGGAGGAGGGAAGAGTGG+CGG 0.619304 4_1:-58644249 None:intergenic
TTCCCTTGCAATCTCAATGG+CGG 0.621726 4_1:+58644202 Msa0559460:exon
GATCAGAGTCAAGATGGGAA+AGG 0.621872 4_1:+58646164 Msa0559460:CDS
ATTCACAATACCCATACTAA+GGG 0.623282 4_1:-58646004 None:intergenic
GGTGTTAAAAGAGAGTCGAT+GGG 0.629384 4_1:-58644312 None:intergenic
TATGATGGAATGTGCTGCTG+AGG 0.629809 4_1:+58645564 Msa0559460:CDS
TTGTAATGTACAAGATGGAG+AGG 0.633836 4_1:-58646266 None:intergenic
CAGAGACTAACATTTCGTCT+GGG 0.635999 4_1:+58645305 Msa0559460:CDS
AGTTGTTAAATCTGGACAAG+GGG 0.636682 4_1:+58645213 Msa0559460:CDS
GAACGTGGATCCAGGCGTGT+CGG 0.638878 4_1:+58645711 Msa0559460:CDS
AGTCACTGATTGGATCTCCA+AGG 0.639826 4_1:+58644759 Msa0559460:CDS
GGGTGTTGGTAATTGGGGCA+GGG 0.641450 4_1:+58645401 Msa0559460:CDS
TACTTCAAACAGATGTTGTG+TGG 0.642747 4_1:-58645131 None:intergenic
GAAGGGGATTATCAGAACGA+AGG 0.645234 4_1:-58644355 None:intergenic
ACAAGAACCATCTCGTCATG+CGG 0.648065 4_1:-58646445 None:intergenic
TATATCTATTCCAAGGAACG+TGG 0.651140 4_1:+58645696 Msa0559460:CDS
AAGTTGTTAAATCTGGACAA+GGG 0.651987 4_1:+58645212 Msa0559460:CDS
CTCACACCTTGGCCAACCGG+AGG 0.652057 4_1:-58645655 None:intergenic
CAGAATGTATGATCTTGAGA+CGG 0.654392 4_1:+58646119 Msa0559460:CDS
CATAACTCCTGAATAACTTG+AGG 0.655387 4_1:-58644640 None:intergenic
AGCCGCCATTGAGATTGCAA+GGG 0.656342 4_1:-58644204 None:intergenic
ATACGGAGGGGACTATACAT+TGG 0.658282 4_1:+58646346 Msa0559460:three_prime_UTR
TTGACCTTCTCCAAGAACAA+GGG 0.668022 4_1:-58645170 None:intergenic
AGCAGGTGAAAATTTGACGG+AGG 0.668447 4_1:-58644264 None:intergenic
GTGTTAAAAGAGAGTCGATG+GGG 0.677380 4_1:-58644311 None:intergenic
GGGTCGGTGATGTAGGCGTG+TGG 0.678434 4_1:+58643974 Msa0559460:five_prime_UTR
GATTATGAATGGGAATGGGT+CGG 0.683700 4_1:+58643958 None:intergenic
TTGCAATTCCAGAAGCTCAG+TGG 0.683759 4_1:+58644617 Msa0559460:CDS
AGCACGGGGAATTATTCAGG+AGG 0.690702 4_1:+58645822 Msa0559460:CDS
GGTGTTGAGAGAGGGCAACA+AGG 0.693165 4_1:-58644723 None:intergenic
CAGAAAGCTATGGAAGCACG+GGG 0.698718 4_1:+58645808 Msa0559460:CDS
AAATGTTTGTCAAAGATGCG+TGG 0.708070 4_1:+58645946 Msa0559460:CDS
AGTTGTTGATGCTAACAAGG+AGG 0.725440 4_1:+58645777 Msa0559460:CDS
GTTGCCCTCTCTCAACACCG+CGG 0.747760 4_1:+58644727 Msa0559460:CDS
CAGTGACTTCTCTAACACCG+CGG 0.783803 4_1:-58644744 None:intergenic
GAATGCACTAGTGTACAATG+TGG 0.788796 4_1:+58645741 Msa0559460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAATAAATAATTTATGAAT+GGG - chr4_1:58644107-58644126 None:intergenic 10.0%
!! AGTAATAAATAATTTATGAA+TGG - chr4_1:58644108-58644127 None:intergenic 10.0%
!!! TTATTATATTTTTACAGTTT+AGG + chr4_1:58644926-58644945 Msa0559460:intron 10.0%
!!! TATTATATTTTTACAGTTTA+GGG + chr4_1:58644927-58644946 Msa0559460:intron 10.0%
!!! TATCATTTTTTAACATTATA+CGG + chr4_1:58646329-58646348 Msa0559460:three_prime_UTR 10.0%
!! TAAATTTGATGTATTCTATA+TGG + chr4_1:58644887-58644906 Msa0559460:intron 15.0%
!! TAAAAATATAATAAGTACGT+AGG - chr4_1:58644920-58644939 None:intergenic 15.0%
!!! TTTCTGTTTTTGTTTGTTTT+AGG + chr4_1:58644517-58644536 Msa0559460:intron 20.0%
!!! ATTTTTTAACATTATACGGA+GGG + chr4_1:58646333-58646352 Msa0559460:three_prime_UTR 20.0%
! ATGAATGAATTAAGAATGCA+AGG - chr4_1:58644148-58644167 None:intergenic 25.0%
!!! GTTTGTTTTAGGATATACAA+AGG + chr4_1:58644528-58644547 Msa0559460:intron 25.0%
! AGATATATGAATACATACCT+TGG - chr4_1:58644779-58644798 None:intergenic 25.0%
! AATACATCAAATTTAGTCTC+TGG - chr4_1:58644882-58644901 None:intergenic 25.0%
! GATGTATTCTATATGGTTTA+TGG + chr4_1:58644894-58644913 Msa0559460:intron 25.0%
!! TCAGATCTTGTTGTATAATA+AGG + chr4_1:58645105-58645124 Msa0559460:CDS 25.0%
! GTTAAACAAGTTGTTAAATC+TGG + chr4_1:58645205-58645224 Msa0559460:CDS 25.0%
! ATTAAACATTTGGTTGCTAA+AGG + chr4_1:58645442-58645461 Msa0559460:CDS 25.0%
! TTAAACATTTGGTTGCTAAA+GGG + chr4_1:58645443-58645462 Msa0559460:CDS 25.0%
!!! GTTCTCTTTTGAAAACAAAA+GGG - chr4_1:58645623-58645642 None:intergenic 25.0%
!! GCTCTAAATTTCTTAATAGT+AGG - chr4_1:58645892-58645911 None:intergenic 25.0%
!! AATTTAGAGCTTATGTTGAA+AGG + chr4_1:58645902-58645921 Msa0559460:CDS 25.0%
! TACTATTGTAATGTACAAGA+TGG - chr4_1:58646274-58646293 None:intergenic 25.0%
!!! CATTTTTTAACATTATACGG+AGG + chr4_1:58646332-58646351 Msa0559460:three_prime_UTR 25.0%
!!! TTTTTTAACATTATACGGAG+GGG + chr4_1:58646334-58646353 Msa0559460:three_prime_UTR 25.0%
!! TATCTTTTCTGTCAATCTTT+TGG + chr4_1:58646581-58646600 Msa0559460:three_prime_UTR 25.0%
AAGAAACATGACAATATCGT+TGG - chr4_1:58644033-58644052 None:intergenic 30.0%
TTATTTGACCAGACAAAAAG+TGG - chr4_1:58644073-58644092 None:intergenic 30.0%
AAATAATTTATGAATGGGCG+CGG - chr4_1:58644102-58644121 None:intergenic 30.0%
TCTCTGGTATTAAGATCTTA+GGG - chr4_1:58644866-58644885 None:intergenic 30.0%
AATTGCAGGGATTAAATTGA+TGG + chr4_1:58644954-58644973 Msa0559460:intron 30.0%
!! TTGATGATTTTGCAGAAAAG+TGG + chr4_1:58645055-58645074 Msa0559460:intron 30.0%
! TGATGATTTTGCAGAAAAGT+GGG + chr4_1:58645056-58645075 Msa0559460:intron 30.0%
ATGTTTAGAAATCTCAGGTA+CGG - chr4_1:58645086-58645105 None:intergenic 30.0%
ATCTGATGTTTAGAAATCTC+AGG - chr4_1:58645091-58645110 None:intergenic 30.0%
AAGTTGTTAAATCTGGACAA+GGG + chr4_1:58645212-58645231 Msa0559460:CDS 30.0%
!! CTTATTTTCCTATCAAAACC+TGG - chr4_1:58645241-58645260 None:intergenic 30.0%
!! GGTTTTGATAGGAAAATAAG+TGG + chr4_1:58645241-58645260 Msa0559460:CDS 30.0%
GAAGCTAGTGATTAAACATT+TGG + chr4_1:58645432-58645451 Msa0559460:CDS 30.0%
!! CGTTCTCTTTTGAAAACAAA+AGG - chr4_1:58645624-58645643 None:intergenic 30.0%
!! TTTGTTTTCAAAAGAGAACG+TGG + chr4_1:58645624-58645643 Msa0559460:CDS 30.0%
TCGTTGATATATCTATTCCA+AGG + chr4_1:58645689-58645708 Msa0559460:CDS 30.0%
ATTCACAATACCCATACTAA+GGG - chr4_1:58646007-58646026 None:intergenic 30.0%
TATTCACAATACCCATACTA+AGG - chr4_1:58646008-58646027 None:intergenic 30.0%
ATTGTGAATAAGCTACTTCA+TGG + chr4_1:58646018-58646037 Msa0559460:CDS 30.0%
TTAAAAAATGAGTCTCCCAA+GGG - chr4_1:58646308-58646327 None:intergenic 30.0%
ATTAAAAAATGAGTCTCCCA+AGG - chr4_1:58646309-58646328 None:intergenic 30.0%
TGACGTGTTAAATTCAGTAT+GGG - chr4_1:58646376-58646395 None:intergenic 30.0%
TTGACGTGTTAAATTCAGTA+TGG - chr4_1:58646377-58646396 None:intergenic 30.0%
ACGTCAAATTTATAGAGATG+AGG + chr4_1:58646390-58646409 Msa0559460:three_prime_UTR 30.0%
!! TTATAGAGATGAGGTTGATA+TGG + chr4_1:58646399-58646418 Msa0559460:three_prime_UTR 30.0%
!! TATAGAGATGAGGTTGATAT+GGG + chr4_1:58646400-58646419 Msa0559460:three_prime_UTR 30.0%
!!! TGTTTTGAAGTATATGCATC+TGG + chr4_1:58646552-58646571 Msa0559460:three_prime_UTR 30.0%
!! ACAATATCGTTGGTTTGGTT+TGG - chr4_1:58644023-58644042 None:intergenic 35.0%
! ACATGACAATATCGTTGGTT+TGG - chr4_1:58644028-58644047 None:intergenic 35.0%
TTGAGCAGGTGAAAATTTGA+CGG - chr4_1:58644270-58644289 None:intergenic 35.0%
!! AACGATGACATTTTGAGGAA+GGG - chr4_1:58644375-58644394 None:intergenic 35.0%
!! AAACGATGACATTTTGAGGA+AGG - chr4_1:58644376-58644395 None:intergenic 35.0%
! TTGGAAACGATGACATTTTG+AGG - chr4_1:58644380-58644399 None:intergenic 35.0%
AAGAGCAGCATAATTGTGAT+TGG + chr4_1:58644553-58644572 Msa0559460:CDS 35.0%
CATAACTCCTGAATAACTTG+AGG - chr4_1:58644643-58644662 None:intergenic 35.0%
GATCTTAGGGACTAAATTGA+CGG - chr4_1:58644853-58644872 None:intergenic 35.0%
GTCTCTGGTATTAAGATCTT+AGG - chr4_1:58644867-58644886 None:intergenic 35.0%
AGTTTAGGGACTAAATTGCA+GGG + chr4_1:58644941-58644960 Msa0559460:intron 35.0%
! GATGATTTTGCAGAAAAGTG+GGG + chr4_1:58645057-58645076 Msa0559460:intron 35.0%
TACTTCAAACAGATGTTGTG+TGG - chr4_1:58645134-58645153 None:intergenic 35.0%
CAAGTTGTTAAATCTGGACA+AGG + chr4_1:58645211-58645230 Msa0559460:CDS 35.0%
AGTTGTTAAATCTGGACAAG+GGG + chr4_1:58645213-58645232 Msa0559460:CDS 35.0%
AAGAGAAAGTCAATGCCATT+AGG + chr4_1:58645497-58645516 Msa0559460:CDS 35.0%
TAGACCTCTTTCTGATATGA+TGG + chr4_1:58645549-58645568 Msa0559460:CDS 35.0%
CATTCCATCATATCAGAAAG+AGG - chr4_1:58645556-58645575 None:intergenic 35.0%
TATATCTATTCCAAGGAACG+TGG + chr4_1:58645696-58645715 Msa0559460:CDS 35.0%
AGAAGTTGTTGATGCTAACA+AGG + chr4_1:58645774-58645793 Msa0559460:CDS 35.0%
GGAGGAATTGAATACATTTG+AGG + chr4_1:58645840-58645859 Msa0559460:CDS 35.0%
! AATTGAATACATTTGAGGCG+TGG + chr4_1:58645845-58645864 Msa0559460:CDS 35.0%
AAATGTTTGTCAAAGATGCG+TGG + chr4_1:58645946-58645965 Msa0559460:CDS 35.0%
CAGAATGTATGATCTTGAGA+CGG + chr4_1:58646119-58646138 Msa0559460:CDS 35.0%
TGAGACGGAAATATCATTGA+TGG + chr4_1:58646134-58646153 Msa0559460:CDS 35.0%
AGAAAAGATCAGAGTCAAGA+TGG + chr4_1:58646158-58646177 Msa0559460:CDS 35.0%
GAAAAGATCAGAGTCAAGAT+GGG + chr4_1:58646159-58646178 Msa0559460:CDS 35.0%
TTGTAATGTACAAGATGGAG+AGG - chr4_1:58646269-58646288 None:intergenic 35.0%
!!! TAGTATCTTTTTCAGACCCT+TGG + chr4_1:58646289-58646308 Msa0559460:three_prime_UTR 35.0%
!!! AGTATCTTTTTCAGACCCTT+GGG + chr4_1:58646290-58646309 Msa0559460:three_prime_UTR 35.0%
GACGTGTTAAATTCAGTATG+GGG - chr4_1:58646375-58646394 None:intergenic 35.0%
!! GGTTTGGTTTGGTTTGGTAA+TGG - chr4_1:58644012-58644031 None:intergenic 40.0%
!! ATCGTTGGTTTGGTTTGGTT+TGG - chr4_1:58644018-58644037 None:intergenic 40.0%
!!! TACCTGTTCCACTTTTTGTC+TGG + chr4_1:58644062-58644081 Msa0559460:five_prime_UTR 40.0%
GCAAGGAATAGTTAGTAGCT+AGG - chr4_1:58644131-58644150 None:intergenic 40.0%
GTGGATTTAGGAAATTGAGC+AGG - chr4_1:58644284-58644303 None:intergenic 40.0%
GTGTTAAAAGAGAGTCGATG+GGG - chr4_1:58644314-58644333 None:intergenic 40.0%
GGTGTTAAAAGAGAGTCGAT+GGG - chr4_1:58644315-58644334 None:intergenic 40.0%
! AGGGTGCATTTGGGAATTTT+GGG - chr4_1:58644338-58644357 None:intergenic 40.0%
!! AAGGGTGCATTTGGGAATTT+TGG - chr4_1:58644339-58644358 None:intergenic 40.0%
AAGGGGATTATCAGAACGAA+GGG - chr4_1:58644357-58644376 None:intergenic 40.0%
!! ACGATGACATTTTGAGGAAG+GGG - chr4_1:58644374-58644393 None:intergenic 40.0%
! TGTCAGCTGAAGAGGTTTTA+AGG - chr4_1:58644421-58644440 None:intergenic 40.0%
TTTCTTACTGTCAGCTGAAG+AGG - chr4_1:58644429-58644448 None:intergenic 40.0%
GTGTTAGAGAAGTCACTGAT+TGG + chr4_1:58644749-58644768 Msa0559460:CDS 40.0%
CAGTTTAGGGACTAAATTGC+AGG + chr4_1:58644940-58644959 Msa0559460:intron 40.0%
TTGACCTTCTCCAAGAACAA+GGG - chr4_1:58645173-58645192 None:intergenic 40.0%
TTTGACCTTCTCCAAGAACA+AGG - chr4_1:58645174-58645193 None:intergenic 40.0%
!! AATAAGTGGTTTGCTCAAGC+AGG + chr4_1:58645255-58645274 Msa0559460:CDS 40.0%
AGGCTATCTCTGTTGGAAAA+CGG + chr4_1:58645275-58645294 Msa0559460:CDS 40.0%
ACAGAGACTAACATTTCGTC+TGG + chr4_1:58645304-58645323 Msa0559460:CDS 40.0%
CAGAGACTAACATTTCGTCT+GGG + chr4_1:58645305-58645324 Msa0559460:CDS 40.0%
! AAGCGTTCAGAGTCTTCTTT+TGG + chr4_1:58645370-58645389 Msa0559460:CDS 40.0%
!!! AGTCTTCTTTTGGTGATGCT+AGG + chr4_1:58645380-58645399 Msa0559460:CDS 40.0%
!!! GTCTTCTTTTGGTGATGCTA+GGG + chr4_1:58645381-58645400 Msa0559460:CDS 40.0%
!! ATGCTAGGGTGTTGGTAATT+GGG + chr4_1:58645395-58645414 Msa0559460:CDS 40.0%
!! TGCTAAAGGGTGTCGAAAAA+TGG + chr4_1:58645456-58645475 Msa0559460:CDS 40.0%
GAAAGTCAATGCCATTAGGA+AGG + chr4_1:58645501-58645520 Msa0559460:CDS 40.0%
ATCCTTCAACTCCTTCCTAA+TGG - chr4_1:58645515-58645534 None:intergenic 40.0%
GAATGCACTAGTGTACAATG+TGG + chr4_1:58645741-58645760 Msa0559460:CDS 40.0%
AGTTGTTGATGCTAACAAGG+AGG + chr4_1:58645777-58645796 Msa0559460:CDS 40.0%
GGATAGACAACAGAAAGCTA+TGG + chr4_1:58645798-58645817 Msa0559460:CDS 40.0%
AACAGAAAGCTATGGAAGCA+CGG + chr4_1:58645806-58645825 Msa0559460:CDS 40.0%
AGCAATGTATGCCCTTAGTA+TGG + chr4_1:58645993-58646012 Msa0559460:CDS 40.0%
GCAATGTATGCCCTTAGTAT+GGG + chr4_1:58645994-58646013 Msa0559460:CDS 40.0%
ATCATTTCATGCCATTCCCA+TGG + chr4_1:58646227-58646246 Msa0559460:three_prime_UTR 40.0%
!!! TGCTGATTTTTTGCAAGTGC+TGG + chr4_1:58646506-58646525 Msa0559460:three_prime_UTR 40.0%
GACCAGACAAAAAGTGGAAC+AGG - chr4_1:58644067-58644086 None:intergenic 45.0%
! AAGGAAGGAAGGAGTGTGAT+CGG - chr4_1:58644184-58644203 None:intergenic 45.0%
TTGAGATTGCAAGGGAAGGA+AGG - chr4_1:58644199-58644218 None:intergenic 45.0%
TCCTTCCCTTGCAATCTCAA+TGG + chr4_1:58644199-58644218 Msa0559460:exon 45.0%
TTCCCTTGCAATCTCAATGG+CGG + chr4_1:58644202-58644221 Msa0559460:exon 45.0%
GGTGAAAATTTGACGGAGGA+GGG - chr4_1:58644263-58644282 None:intergenic 45.0%
AGGTGAAAATTTGACGGAGG+AGG - chr4_1:58644264-58644283 None:intergenic 45.0%
AGCAGGTGAAAATTTGACGG+AGG - chr4_1:58644267-58644286 None:intergenic 45.0%
TAAAAGAGAGTCGATGGGGA+GGG - chr4_1:58644310-58644329 None:intergenic 45.0%
TTAAAAGAGAGTCGATGGGG+AGG - chr4_1:58644311-58644330 None:intergenic 45.0%
GGGTGTTAAAAGAGAGTCGA+TGG - chr4_1:58644316-58644335 None:intergenic 45.0%
! GGTGCATTTGGGAATTTTGG+GGG - chr4_1:58644336-58644355 None:intergenic 45.0%
! GGGTGCATTTGGGAATTTTG+GGG - chr4_1:58644337-58644356 None:intergenic 45.0%
! TCAGAACGAAGGGTGCATTT+GGG - chr4_1:58644347-58644366 None:intergenic 45.0%
! ATCAGAACGAAGGGTGCATT+TGG - chr4_1:58644348-58644367 None:intergenic 45.0%
GAAGGGGATTATCAGAACGA+AGG - chr4_1:58644358-58644377 None:intergenic 45.0%
TTAAGGATCTCGAGAGGAGA+AGG - chr4_1:58644404-58644423 None:intergenic 45.0%
!!! GAGGTTTTAAGGATCTCGAG+AGG - chr4_1:58644410-58644429 None:intergenic 45.0%
TTGCAATTCCAGAAGCTCAG+TGG + chr4_1:58644617-58644636 Msa0559460:CDS 45.0%
TCAGTGGCCTCAAGTTATTC+AGG + chr4_1:58644633-58644652 Msa0559460:CDS 45.0%
! AGTCACTGATTGGATCTCCA+AGG + chr4_1:58644759-58644778 Msa0559460:CDS 45.0%
CATACAGAGCAGAATGAAGC+AGG - chr4_1:58644806-58644825 None:intergenic 45.0%
! CATCTGTTTGAAGTAGCTGC+TGG + chr4_1:58645139-58645158 Msa0559460:CDS 45.0%
GGCTATCTCTGTTGGAAAAC+GGG + chr4_1:58645276-58645295 Msa0559460:CDS 45.0%
GACTAACATTTCGTCTGGGT+CGG + chr4_1:58645309-58645328 Msa0559460:CDS 45.0%
TTCTGTTAGTTCAGCTGCTG+TGG + chr4_1:58645333-58645352 Msa0559460:CDS 45.0%
!!! TTTTGGTGATGCTAGGGTGT+TGG + chr4_1:58645387-58645406 Msa0559460:CDS 45.0%
!! GATGCTAGGGTGTTGGTAAT+TGG + chr4_1:58645394-58645413 Msa0559460:CDS 45.0%
!! TGCTAGGGTGTTGGTAATTG+GGG + chr4_1:58645396-58645415 Msa0559460:CDS 45.0%
TGCCATTAGGAAGGAGTTGA+AGG + chr4_1:58645510-58645529 Msa0559460:CDS 45.0%
! TATGATGGAATGTGCTGCTG+AGG + chr4_1:58645564-58645583 Msa0559460:CDS 45.0%
! ACAGAAAGCTATGGAAGCAC+GGG + chr4_1:58645807-58645826 Msa0559460:CDS 45.0%
AAGGATTAGAGCTTCTGAGC+TGG + chr4_1:58645921-58645940 Msa0559460:CDS 45.0%
!! TGAGAGCACGCATGTTTTCA+AGG - chr4_1:58646098-58646117 None:intergenic 45.0%
GATCAGAGTCAAGATGGGAA+AGG + chr4_1:58646164-58646183 Msa0559460:CDS 45.0%
ATTTCATGCCATTCCCATGG+TGG + chr4_1:58646230-58646249 Msa0559460:three_prime_UTR 45.0%
ATACGGAGGGGACTATACAT+TGG + chr4_1:58646346-58646365 Msa0559460:three_prime_UTR 45.0%
ACAAGAACCATCTCGTCATG+CGG - chr4_1:58646448-58646467 None:intergenic 45.0%
!!! TTTTTAAAATTAAATTGAAA+TGG - chr4_1:58644471-58644490 None:intergenic 5.0%
!!! TAATTTTAAAAAAATCTTAT+AGG + chr4_1:58644479-58644498 Msa0559460:intron 5.0%
!!! AATTTTAAAAAAATCTTATA+GGG + chr4_1:58644480-58644499 Msa0559460:intron 5.0%
! AGGAAGGAAGGAGTGTGATC+GGG - chr4_1:58644183-58644202 None:intergenic 50.0%
GATTGCAAGGGAAGGAAGGA+AGG - chr4_1:58644195-58644214 None:intergenic 50.0%
GCCATTGAGATTGCAAGGGA+AGG - chr4_1:58644203-58644222 None:intergenic 50.0%
AGCCGCCATTGAGATTGCAA+GGG - chr4_1:58644207-58644226 None:intergenic 50.0%
TGGGGAGGGAATGTGGATTT+AGG - chr4_1:58644296-58644315 None:intergenic 50.0%
GATCTCGAGAGGAGAAGGTT+TGG - chr4_1:58644399-58644418 None:intergenic 50.0%
AGTTTCTCGCGCATCTCAAC+AGG - chr4_1:58644598-58644617 None:intergenic 50.0%
CAGTGACTTCTCTAACACCG+CGG - chr4_1:58644747-58644766 None:intergenic 50.0%
CAGAGCAGAATGAAGCAGGA+TGG - chr4_1:58644802-58644821 None:intergenic 50.0%
GGTCTTGACTCCCTTGTTCT+TGG + chr4_1:58645160-58645179 Msa0559460:CDS 50.0%
GACTCCCTTGTTCTTGGAGA+AGG + chr4_1:58645166-58645185 Msa0559460:CDS 50.0%
!!! AAGGGGTGCCAGGTTTTGAT+AGG + chr4_1:58645230-58645249 Msa0559460:CDS 50.0%
CTCAAGCAGGCTATCTCTGT+TGG + chr4_1:58645268-58645287 Msa0559460:CDS 50.0%
TAGTTCAGCTGCTGTGGAGT+TGG + chr4_1:58645339-58645358 Msa0559460:CDS 50.0%
GTAATTGGGGCAGGGAAGAT+GGG + chr4_1:58645409-58645428 Msa0559460:CDS 50.0%
TAATTGGGGCAGGGAAGATG+GGG + chr4_1:58645410-58645429 Msa0559460:CDS 50.0%
GAGGCTGATGTGATCTTCAC+TGG + chr4_1:58645583-58645602 Msa0559460:CDS 50.0%
GAACGTGGAGATTCTTCCTC+CGG + chr4_1:58645639-58645658 Msa0559460:CDS 50.0%
TTGGCCAAGGTGTGAGAAGA+CGG + chr4_1:58645662-58645681 Msa0559460:CDS 50.0%
ATTCCAAGGAACGTGGATCC+AGG + chr4_1:58645703-58645722 Msa0559460:CDS 50.0%
! CAGAAAGCTATGGAAGCACG+GGG + chr4_1:58645808-58645827 Msa0559460:CDS 50.0%
! GGAAGCACGGGGAATTATTC+AGG + chr4_1:58645819-58645838 Msa0559460:CDS 50.0%
AGCACGGGGAATTATTCAGG+AGG + chr4_1:58645822-58645841 Msa0559460:CDS 50.0%
ATGGTCCTATGCAGCATCTG+AGG + chr4_1:58646037-58646056 Msa0559460:CDS 50.0%
TCACACCTCAGATGCTGCAT+AGG - chr4_1:58646045-58646064 None:intergenic 50.0%
! ATGCAGCATCTGAGGTGTGA+TGG + chr4_1:58646045-58646064 Msa0559460:CDS 50.0%
! TGCAGCATCTGAGGTGTGAT+GGG + chr4_1:58646046-58646065 Msa0559460:CDS 50.0%
CAGCCGCCATTGAGATTGCA+AGG - chr4_1:58644208-58644227 None:intergenic 55.0%
TTTGACGGAGGAGGGAAGAG+TGG - chr4_1:58644255-58644274 None:intergenic 55.0%
ACTTGAGGCCACTGAGCTTC+TGG - chr4_1:58644628-58644647 None:intergenic 55.0%
! GGTGTTGAGAGAGGGCAACA+AGG - chr4_1:58644726-58644745 None:intergenic 55.0%
! AACACCGCGGTGTTGAGAGA+GGG - chr4_1:58644734-58644753 None:intergenic 55.0%
! TAACACCGCGGTGTTGAGAG+AGG - chr4_1:58644735-58644754 None:intergenic 55.0%
!! AAATCTGGACAAGGGGTGCC+AGG + chr4_1:58645220-58645239 Msa0559460:CDS 55.0%
!! AGGGTGTTGGTAATTGGGGC+AGG + chr4_1:58645400-58645419 Msa0559460:CDS 55.0%
!! GGGTGTTGGTAATTGGGGCA+GGG + chr4_1:58645401-58645420 Msa0559460:CDS 55.0%
GGTAATTGGGGCAGGGAAGA+TGG + chr4_1:58645408-58645427 Msa0559460:CDS 55.0%
GTGGAGATTCTTCCTCCGGT+TGG + chr4_1:58645643-58645662 Msa0559460:CDS 55.0%
! ATTCTTCCTCCGGTTGGCCA+AGG + chr4_1:58645649-58645668 Msa0559460:CDS 55.0%
CTTCTCACACCTTGGCCAAC+CGG - chr4_1:58645661-58645680 None:intergenic 55.0%
AGAGCCGTCTTCTCACACCT+TGG - chr4_1:58645669-58645688 None:intergenic 55.0%
TTCTCAAGTTCCGACACGCC+TGG - chr4_1:58645724-58645743 None:intergenic 55.0%
AGTTGCAGCCACCATGGGAA+TGG - chr4_1:58646241-58646260 None:intergenic 55.0%
CTTGCAGTTGCAGCCACCAT+GGG - chr4_1:58646246-58646265 None:intergenic 55.0%
TCACACTCCGCATGACGAGA+TGG + chr4_1:58646438-58646457 Msa0559460:three_prime_UTR 55.0%
GCAATCTCAATGGCGGCTGC+AGG + chr4_1:58644209-58644228 Msa0559460:exon 60.0%
ATCTCAATGGCGGCTGCAGG+TGG + chr4_1:58644212-58644231 Msa0559460:exon 60.0%
GAGTCGATGGGGAGGGAATG+TGG - chr4_1:58644303-58644322 None:intergenic 60.0%
GTTGCCCTCTCTCAACACCG+CGG + chr4_1:58644727-58644746 Msa0559460:CDS 60.0%
ACGCCTGGATCCACGTTCCT+TGG - chr4_1:58645709-58645728 None:intergenic 60.0%
GAACGTGGATCCAGGCGTGT+CGG + chr4_1:58645711-58645730 Msa0559460:CDS 60.0%
! GATGCGTGGTGACGTCTCGA+AGG + chr4_1:58645960-58645979 Msa0559460:CDS 60.0%
GCTTGCAGTTGCAGCCACCA+TGG - chr4_1:58646247-58646266 None:intergenic 60.0%
GGGTCGGTGATGTAGGCGTG+TGG + chr4_1:58643974-58643993 Msa0559460:five_prime_UTR 65.0%
GACGGAGGAGGGAAGAGTGG+CGG - chr4_1:58644252-58644271 None:intergenic 65.0%
CTCACACCTTGGCCAACCGG+AGG - chr4_1:58645658-58645677 None:intergenic 65.0%
GGGAAGAGTGGCGGTGGAGG+AGG - chr4_1:58644243-58644262 None:intergenic 70.0%
GGAGGGAAGAGTGGCGGTGG+AGG - chr4_1:58644246-58644265 None:intergenic 70.0%
GGAGGAGGGAAGAGTGGCGG+TGG - chr4_1:58644249-58644268 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 58643970 58646614 58643970 ID=Msa0559460;Name=Msa0559460
chr4_1 mRNA 58643970 58646614 58643970 ID=Msa0559460-mRNA-1;Parent=Msa0559460;Name=Msa0559460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=248|1|1|1|1|1|3|417|530
chr4_1 exon 58643970 58644440 58643970 ID=Msa0559460-mRNA-1:exon:17865;Parent=Msa0559460-mRNA-1
chr4_1 exon 58644539 58644780 58644539 ID=Msa0559460-mRNA-1:exon:17866;Parent=Msa0559460-mRNA-1
chr4_1 exon 58645070 58646614 58645070 ID=Msa0559460-mRNA-1:exon:17867;Parent=Msa0559460-mRNA-1
chr4_1 five_prime_UTR 58643970 58644217 58643970 ID=Msa0559460-mRNA-1:five_prime_utr;Parent=Msa0559460-mRNA-1
chr4_1 CDS 58644218 58644440 58644218 ID=Msa0559460-mRNA-1:cds;Parent=Msa0559460-mRNA-1
chr4_1 CDS 58644539 58644780 58644539 ID=Msa0559460-mRNA-1:cds;Parent=Msa0559460-mRNA-1
chr4_1 CDS 58645070 58646197 58645070 ID=Msa0559460-mRNA-1:cds;Parent=Msa0559460-mRNA-1
chr4_1 three_prime_UTR 58646198 58646614 58646198 ID=Msa0559460-mRNA-1:three_prime_utr;Parent=Msa0559460-mRNA-1
Gene Sequence

>Msa0559460

ATGGCGGCTGCAGGTGGCGCATCCTCCTCCACCGCCACTCTTCCCTCCTCCGTCAAATTTTCACCTGCTCAATTTCCTAAATCCACATTCCCTCCCCATCGACTCTCTTTTAACACCCCCAAAATTCCCAAATGCACCCTTCGTTCTGATAATCCCCTTCCTCAAAATGTCATCGTTTCCAAACCTTCTCCTCTCGAGATCCTTAAAACCTCTTCAGCTGACAGATATACAAAGGAAAAGAGCAGCATAATTGTGATTGGTTTGAATGTTCACACTGCTCCTGTTGAGATGCGCGAGAAACTTGCAATTCCAGAAGCTCAGTGGCCTCAAGTTATTCAGGAGTTATGTGCTCTTAATCATATTGAAGAAGCAGCTGTTCTCAGCACATGTAATCGAATTGAAATATACCTTGTTGCCCTCTCTCAACACCGCGGTGTTAGAGAAGTCACTGATTGGATCTCCAAGAAAAGTGGGGTTTCCGTACCTGAGATTTCTAAACATCAGATCTTGTTGTATAATAAGGATGCCACACAACATCTGTTTGAAGTAGCTGCTGGTCTTGACTCCCTTGTTCTTGGAGAAGGTCAAATTCTTTCTCAAGTTAAACAAGTTGTTAAATCTGGACAAGGGGTGCCAGGTTTTGATAGGAAAATAAGTGGTTTGCTCAAGCAGGCTATCTCTGTTGGAAAACGGGTTCGAACAGAGACTAACATTTCGTCTGGGTCGGTTTCTGTTAGTTCAGCTGCTGTGGAGTTGGCGCTTATGAAGCGTTCAGAGTCTTCTTTTGGTGATGCTAGGGTGTTGGTAATTGGGGCAGGGAAGATGGGGAAGCTAGTGATTAAACATTTGGTTGCTAAAGGGTGTCGAAAAATGGTTGTTGTTAATAGAAGTGAAGAGAAAGTCAATGCCATTAGGAAGGAGTTGAAGGATGTTGACATAGTATATAGACCTCTTTCTGATATGATGGAATGTGCTGCTGAGGCTGATGTGATCTTCACTGGTACTGCATCTGAGTCCCTTTTGTTTTCAAAAGAGAACGTGGAGATTCTTCCTCCGGTTGGCCAAGGTGTGAGAAGACGGCTCTTCGTTGATATATCTATTCCAAGGAACGTGGATCCAGGCGTGTCGGAACTTGAGAATGCACTAGTGTACAATGTGGATGATCTTCGAGAAGTTGTTGATGCTAACAAGGAGGATAGACAACAGAAAGCTATGGAAGCACGGGGAATTATTCAGGAGGAATTGAATACATTTGAGGCGTGGAAAGACTCTCTTGAAACTGTTCCTACTATTAAGAAATTTAGAGCTTATGTTGAAAGGATTAGAGCTTCTGAGCTGGAAAAATGTTTGTCAAAGATGCGTGGTGACGTCTCGAAGGAACAGAAAGAAGCAATGTATGCCCTTAGTATGGGTATTGTGAATAAGCTACTTCATGGTCCTATGCAGCATCTGAGGTGTGATGGGAATGATAATAAATGTCTTGACGAAGTCCTTGAAAACATGCGTGCTCTCAACAGAATGTATGATCTTGAGACGGAAATATCATTGATGGAAGAAAAGATCAGAGTCAAGATGGGAAAGGCTAAGAAGTAA
Protein sequence

>Msa0559460

MAAAGGASSSTATLPSSVKFSPAQFPKSTFPPHRLSFNTPKIPKCTLRSDNPLPQNVIVSKPSPLEILKTSSADRYTKEKSSIIVIGLNVHTAPVEMREKLAIPEAQWPQVIQELCALNHIEEAAVLSTCNRIEIYLVALSQHRGVREVTDWISKKSGVSVPEISKHQILLYNKDATQHLFEVAAGLDSLVLGEGQILSQVKQVVKSGQGVPGFDRKISGLLKQAISVGKRVRTETNISSGSVSVSSAAVELALMKRSESSFGDARVLVIGAGKMGKLVIKHLVAKGCRKMVVVNRSEEKVNAIRKELKDVDIVYRPLSDMMECAAEADVIFTGTASESLLFSKENVEILPPVGQGVRRRLFVDISIPRNVDPGVSELENALVYNVDDLREVVDANKEDRQQKAMEARGIIQEELNTFEAWKDSLETVPTIKKFRAYVERIRASELEKCLSKMRGDVSKEQKEAMYALSMGIVNKLLHGPMQHLRCDGNDNKCLDEVLENMRALNRMYDLETEISLMEEKIRVKMGKAKK*