Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375130 | XP_013468422.1 | 96.737 | 613 | 17 | 1 | 1 | 610 | 3 | 615 | 0.0 | 1233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375130 | sp|Q7XJ98|MUR3_ARATH | 73.312 | 622 | 140 | 8 | 1 | 608 | 7 | 616 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375130 | A0A072VKC5 | 96.737 | 613 | 17 | 1 | 1 | 610 | 3 | 615 | 0.0 | 1233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1375130 | 0.847862 | 8.838420e-60 | -8.615850e-47 |
| Msa0092220 | Msa1375130 | 0.847097 | 1.434852e-59 | -8.615850e-47 |
| Msa1365820 | Msa1375130 | 0.842510 | 2.475219e-58 | -8.615850e-47 |
| Msa1375130 | Msa1442940 | 0.823399 | 1.414126e-53 | -8.615850e-47 |
| Msa1375130 | Msa1453430 | 0.834387 | 3.086288e-56 | -8.615850e-47 |
| Msa0610700 | Msa1375130 | -0.823297 | 1.494118e-53 | -8.615850e-47 |
| Msa0614480 | Msa1375130 | 0.806038 | 9.988922e-50 | -8.615850e-47 |
| Msa0721930 | Msa1375130 | 0.821679 | 3.550918e-53 | -8.615850e-47 |
| Msa0762930 | Msa1375130 | 0.819526 | 1.109094e-52 | -8.615850e-47 |
| Msa0126160 | Msa1375130 | 0.835885 | 1.293222e-56 | -8.615850e-47 |
| Msa0143590 | Msa1375130 | 0.823899 | 1.080556e-53 | -8.615850e-47 |
| Msa0177320 | Msa1375130 | 0.869363 | 3.274937e-66 | -8.615850e-47 |
| Msa0206440 | Msa1375130 | 0.800036 | 1.739681e-48 | -8.615850e-47 |
| Msa0207680 | Msa1375130 | 0.806584 | 7.664281e-50 | -8.615850e-47 |
| Msa0216340 | Msa1375130 | 0.803926 | 2.760310e-49 | -8.615850e-47 |
| Msa1249600 | Msa1375130 | 0.816113 | 6.536511e-52 | -8.615850e-47 |
| Msa1257570 | Msa1375130 | 0.804709 | 1.896064e-49 | -8.615850e-47 |
| Msa1304790 | Msa1375130 | 0.839324 | 1.696507e-57 | -8.615850e-47 |
| Msa1331300 | Msa1375130 | 0.801585 | 8.398865e-49 | -8.615850e-47 |
| Msa0386880 | Msa1375130 | 0.800122 | 1.671316e-48 | -8.615850e-47 |
| Msa0428210 | Msa1375130 | 0.849010 | 4.254927e-60 | -8.615850e-47 |
| Msa1013190 | Msa1375130 | 0.817300 | 3.541595e-52 | -8.615850e-47 |
| Msa1052000 | Msa1375130 | 0.825203 | 5.328414e-54 | -8.615850e-47 |
| Msa1096760 | Msa1375130 | 0.804503 | 2.093863e-49 | -8.615850e-47 |
| Msa0239560 | Msa1375130 | 0.822605 | 2.166392e-53 | -8.615850e-47 |
| Msa0256540 | Msa1375130 | 0.804468 | 2.128797e-49 | -8.615850e-47 |
| Msa0287680 | Msa1375130 | 0.805623 | 1.221069e-49 | -8.615850e-47 |
| Msa0318490 | Msa1375130 | 0.803473 | 3.428725e-49 | -8.615850e-47 |
| Msa0334320 | Msa1375130 | 0.804942 | 1.695129e-49 | -8.615850e-47 |
| Msa1140410 | Msa1375130 | 0.825346 | 4.929326e-54 | -8.615850e-47 |
| Msa1192180 | Msa1375130 | 0.828515 | 8.612765e-55 | -8.615850e-47 |
| Msa1207330 | Msa1375130 | 0.801736 | 7.822515e-49 | -8.615850e-47 |
| Msa0525880 | Msa1375130 | 0.825445 | 4.669132e-54 | -8.615850e-47 |
| Msa0559460 | Msa1375130 | 0.832723 | 8.031320e-56 | -8.615850e-47 |
| Msa0597700 | Msa1375130 | 0.808026 | 3.790463e-50 | -8.615850e-47 |
| Msa0842750 | Msa1375130 | 0.811010 | 8.668708e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375130 | MtrunA17_Chr1g0183211 | 96.737 | 613 | 17 | 1 | 1 | 610 | 3 | 615 | 0.0 | 1233 |
| Msa1375130 | MtrunA17_Chr7g0262171 | 76.316 | 608 | 71 | 5 | 1 | 607 | 1 | 536 | 0.0 | 943 |
| Msa1375130 | MtrunA17_Chr4g0073401 | 56.250 | 400 | 170 | 3 | 147 | 542 | 118 | 516 | 8.70e-170 | 493 |
| Msa1375130 | MtrunA17_Chr3g0121901 | 52.358 | 424 | 194 | 4 | 146 | 562 | 61 | 483 | 2.75e-168 | 488 |
| Msa1375130 | MtrunA17_Chr5g0423071 | 53.349 | 418 | 179 | 5 | 135 | 541 | 81 | 493 | 7.55e-162 | 472 |
| Msa1375130 | MtrunA17_Chr5g0446621 | 53.102 | 403 | 183 | 3 | 147 | 543 | 92 | 494 | 7.51e-154 | 452 |
| Msa1375130 | MtrunA17_Chr3g0078741 | 50.370 | 405 | 168 | 5 | 147 | 543 | 67 | 446 | 1.54e-139 | 414 |
| Msa1375130 | MtrunA17_Chr1g0163321 | 46.053 | 380 | 196 | 3 | 155 | 532 | 85 | 457 | 2.34e-116 | 354 |
| Msa1375130 | MtrunA17_Chr1g0163331 | 45.026 | 382 | 201 | 3 | 154 | 533 | 77 | 451 | 4.92e-115 | 351 |
| Msa1375130 | MtrunA17_Chr5g0446631 | 42.657 | 429 | 177 | 8 | 147 | 567 | 27 | 394 | 9.26e-113 | 343 |
| Msa1375130 | MtrunA17_Chr5g0397581 | 39.326 | 445 | 249 | 9 | 108 | 540 | 111 | 546 | 1.85e-110 | 342 |
| Msa1375130 | MtrunA17_Chr5g0397571 | 40.288 | 417 | 235 | 7 | 129 | 540 | 115 | 522 | 4.70e-105 | 327 |
| Msa1375130 | MtrunA17_Chr4g0067281 | 36.580 | 421 | 239 | 9 | 137 | 536 | 31 | 444 | 3.20e-84 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375130 | AT2G20370.1 | 73.312 | 622 | 140 | 8 | 1 | 608 | 7 | 616 | 0.0 | 920 |
| Msa1375130 | AT2G29040.1 | 56.444 | 450 | 183 | 6 | 139 | 582 | 288 | 730 | 0.0 | 543 |
| Msa1375130 | AT4G13990.2 | 50.957 | 418 | 200 | 4 | 149 | 562 | 95 | 511 | 8.59e-161 | 471 |
| Msa1375130 | AT4G13990.1 | 50.957 | 418 | 200 | 4 | 149 | 562 | 95 | 511 | 8.59e-161 | 471 |
| Msa1375130 | AT2G32750.1 | 49.761 | 418 | 202 | 4 | 136 | 547 | 70 | 485 | 2.37e-158 | 464 |
| Msa1375130 | AT2G32750.2 | 49.761 | 418 | 202 | 4 | 136 | 547 | 72 | 487 | 2.57e-158 | 464 |
| Msa1375130 | AT2G32740.1 | 46.602 | 412 | 209 | 6 | 138 | 540 | 55 | 464 | 2.87e-142 | 421 |
| Msa1375130 | AT2G31990.3 | 50.000 | 406 | 192 | 7 | 147 | 542 | 78 | 482 | 1.78e-141 | 420 |
| Msa1375130 | AT2G31990.1 | 50.000 | 406 | 192 | 7 | 147 | 542 | 70 | 474 | 1.84e-141 | 420 |
| Msa1375130 | AT2G31990.2 | 50.000 | 406 | 192 | 7 | 147 | 542 | 116 | 520 | 6.64e-141 | 420 |
| Msa1375130 | AT1G68470.1 | 45.812 | 382 | 193 | 6 | 154 | 532 | 73 | 443 | 3.53e-113 | 346 |
| Msa1375130 | AT5G62220.1 | 43.719 | 398 | 216 | 5 | 149 | 541 | 118 | 512 | 5.22e-111 | 343 |
| Msa1375130 | AT5G41250.1 | 40.201 | 398 | 222 | 7 | 144 | 537 | 172 | 557 | 1.68e-107 | 335 |
| Msa1375130 | AT1G63450.1 | 40.842 | 404 | 223 | 8 | 139 | 536 | 267 | 660 | 1.70e-107 | 338 |
| Msa1375130 | AT4G22580.1 | 36.409 | 401 | 236 | 8 | 149 | 536 | 37 | 431 | 2.21e-80 | 260 |
Find 147 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGCACGTTATCTT+TGG | 0.193030 | tig0019645:-3425 | Msa1375130:CDS |
| CCGTGGAATGCAAATGATTT+TGG | 0.193783 | tig0019645:-3180 | Msa1375130:CDS |
| CAACCGCCTCCGAGGAAAAT+TGG | 0.202255 | tig0019645:-3876 | Msa1375130:CDS |
| AGTGTAAAAGTTTGAGTCTT+TGG | 0.218524 | tig0019645:-3650 | Msa1375130:CDS |
| CTCCCTGACCAAATGGAAAA+AGG | 0.223737 | tig0019645:-4131 | Msa1375130:CDS |
| CTCATGATTCTCACTTGTTC+AGG | 0.224742 | tig0019645:+2685 | None:intergenic |
| TGATATTGCACGTTATCTTT+GGG | 0.257423 | tig0019645:-3424 | Msa1375130:CDS |
| GAATACTTGGTATAATTCTT+AGG | 0.301851 | tig0019645:+2778 | None:intergenic |
| TTCTCCGGTTGGTAAGCTTT+TGG | 0.334154 | tig0019645:-2992 | Msa1375130:CDS |
| AACAGAAACAGGTGTTGATT+TGG | 0.343201 | tig0019645:+3959 | None:intergenic |
| CTCTTTACCGCAACAGGGTC+AGG | 0.348005 | tig0019645:+3819 | None:intergenic |
| GCCTTTGATTCCATGTTGGC+TGG | 0.352901 | tig0019645:-2859 | Msa1375130:CDS |
| TTTACTACCAATGCTGGTCT+TGG | 0.356831 | tig0019645:-3612 | Msa1375130:CDS |
| GTGTCACTCTTTACCGCAAC+AGG | 0.361158 | tig0019645:+3813 | None:intergenic |
| CTGATTGATTTGGCATTGTC+AGG | 0.361929 | tig0019645:+3042 | None:intergenic |
| GTGTCATTCTTTATCACAAC+AGG | 0.366075 | tig0019645:+3843 | None:intergenic |
| TTGATGTTATATTTAGCAAT+AGG | 0.366737 | tig0019645:-3521 | Msa1375130:CDS |
| AAACTCTTCTCCACCTTCTC+AGG | 0.370250 | tig0019645:+3783 | None:intergenic |
| TTCTCCACCTTCTCAGGGAC+AGG | 0.370551 | tig0019645:+3789 | None:intergenic |
| ACAGTTCTGCTTGCAACCTC+AGG | 0.370804 | tig0019645:-2905 | Msa1375130:CDS |
| CTGACAATGCCAAATCAATC+AGG | 0.371478 | tig0019645:-3041 | Msa1375130:CDS |
| TTCTTTATCACAACAGGGTC+AGG | 0.396330 | tig0019645:+3849 | None:intergenic |
| TAACTGACCCCTGATTGATT+TGG | 0.399847 | tig0019645:+3032 | None:intergenic |
| CTTCGCTTGATCTGGTTGAC+TGG | 0.401762 | tig0019645:-3374 | Msa1375130:CDS |
| GGATGCGGCTTCGCTTGATC+TGG | 0.401985 | tig0019645:-3382 | Msa1375130:CDS |
| CCGCCGCTTGAGAATGTTGA+AGG | 0.412234 | tig0019645:-3588 | Msa1375130:CDS |
| ATGTGCATGATCTTCCTTCA+AGG | 0.413105 | tig0019645:-3695 | Msa1375130:CDS |
| TCATCAAAATGAACAGAAAC+AGG | 0.419490 | tig0019645:+3948 | None:intergenic |
| TAGTAGTATTATCAGCTCTA+AGG | 0.423263 | tig0019645:+4018 | None:intergenic |
| AACCGCCTCCGAGGAAAATT+GGG | 0.428718 | tig0019645:-3875 | Msa1375130:CDS |
| ATGAGACGGCGCCCTGTGGC+GGG | 0.436273 | tig0019645:-4158 | Msa1375130:CDS |
| TTGACAAAGTTACACATTTG+AGG | 0.437236 | tig0019645:-2561 | Msa1375130:CDS |
| CGGCATACACACAGTATACT+TGG | 0.437623 | tig0019645:-2807 | Msa1375130:CDS |
| ATATCCTCATTAAACCTTGA+AGG | 0.437861 | tig0019645:+3681 | None:intergenic |
| TTTATGAAAGCGTTGAAAAC+CGG | 0.445498 | tig0019645:-3756 | Msa1375130:CDS |
| CTCTTACGAATGTCGTCCTC+TGG | 0.446305 | tig0019645:+2745 | None:intergenic |
| AATGAGACGGCGCCCTGTGG+CGG | 0.447625 | tig0019645:-4159 | Msa1375130:CDS |
| ACGAGGTTGGTCCTCATGAA+TGG | 0.447808 | tig0019645:-2456 | Msa1375130:CDS |
| AAACATCTGCATTATGCTGC+TGG | 0.450155 | tig0019645:+2936 | None:intergenic |
| TGTCTTCTTCCATCCAGGTT+CGG | 0.450428 | tig0019645:-2827 | Msa1375130:CDS |
| GAGGTTTATCAATTACATCA+TGG | 0.456581 | tig0019645:+3913 | None:intergenic |
| TTACTACCAATGCTGGTCTT+GGG | 0.458270 | tig0019645:-3611 | Msa1375130:CDS |
| GGGCGTTCTCCCTGACCAAA+TGG | 0.465316 | tig0019645:-4138 | Msa1375130:CDS |
| TCAGGGAGAACGCCCGCCAC+AGG | 0.465895 | tig0019645:+4146 | None:intergenic |
| AAAATAAGAGTGATCCTTGT+GGG | 0.471762 | tig0019645:-3731 | Msa1375130:CDS |
| ATACCTGTCTTCTTCCATCC+AGG | 0.473157 | tig0019645:-2832 | Msa1375130:CDS |
| AGGTTTATCAATTACATCAT+GGG | 0.478661 | tig0019645:+3914 | None:intergenic |
| GGGTGGAAGTATGTAGGATA+AGG | 0.483181 | tig0019645:+3153 | None:intergenic |
| TGAGGCGATTAGAGAGGAAG+TGG | 0.488880 | tig0019645:-3092 | Msa1375130:CDS |
| GTCTGCCTTTGATTCCATGT+TGG | 0.489602 | tig0019645:-2863 | Msa1375130:CDS |
| CGGCGGCCCAAGACCAGCAT+TGG | 0.493353 | tig0019645:+3605 | None:intergenic |
| CAGTTGGAAATATGCTTTGT+TGG | 0.497546 | tig0019645:-2491 | Msa1375130:CDS |
| GAAATATGCTTTGTTGGATG+AGG | 0.505037 | tig0019645:-2485 | Msa1375130:CDS |
| TGATTTGGCATTGTCAGGAC+GGG | 0.505393 | tig0019645:+3047 | None:intergenic |
| TACTGTGTGTATGCCGAACC+TGG | 0.505471 | tig0019645:+2814 | None:intergenic |
| CGAGGTTGGTCCTCATGAAT+GGG | 0.505576 | tig0019645:-2455 | Msa1375130:CDS |
| TGGAATGAAGACAGAATACT+TGG | 0.505827 | tig0019645:+2765 | None:intergenic |
| TGTAAGTTTACTACCAATGC+TGG | 0.507525 | tig0019645:-3618 | Msa1375130:CDS |
| GTTTAATGAGGATATGTTGA+AGG | 0.509728 | tig0019645:-3673 | Msa1375130:CDS |
| AAGATGCTGATGTGTTCAAT+TGG | 0.511920 | tig0019645:-3125 | Msa1375130:CDS |
| TCTCCACCTTCTCAGGGACA+GGG | 0.514271 | tig0019645:+3790 | None:intergenic |
| CCGGAGTGGAGTATAATGAA+TGG | 0.516300 | tig0019645:-3339 | Msa1375130:CDS |
| TGTCTGAGGAAGAAACAGAC+TGG | 0.516652 | tig0019645:-3266 | Msa1375130:CDS |
| TTTGCAGGGTGGAAGTATGT+AGG | 0.517211 | tig0019645:+3147 | None:intergenic |
| GTATGCGACAAATCAGTTTG+CGG | 0.518425 | tig0019645:-3544 | Msa1375130:CDS |
| TCTTCCTTCAAGGTTTAATG+AGG | 0.519335 | tig0019645:-3685 | Msa1375130:CDS |
| TGAGCAATGTAGAAGTTCTC+CGG | 0.519680 | tig0019645:-3007 | Msa1375130:CDS |
| GGGTCAGCATATACTAGTCT+TGG | 0.523979 | tig0019645:+2640 | None:intergenic |
| TGCTGATGTGTTCAATTGGC+AGG | 0.526163 | tig0019645:-3121 | Msa1375130:CDS |
| ATGAGTATCGAGGAAATACT+TGG | 0.526952 | tig0019645:-2718 | Msa1375130:CDS |
| ACTTCATTGAGGAGAACAGT+TGG | 0.528023 | tig0019645:-2507 | Msa1375130:CDS |
| CGGAGTGGAGTATAATGAAT+GGG | 0.528397 | tig0019645:-3338 | Msa1375130:CDS |
| CAGAGGACGACATTCGTAAG+AGG | 0.529906 | tig0019645:-2744 | Msa1375130:CDS |
| TAATATCTCGAGGAGGGATG+CGG | 0.531248 | tig0019645:-3397 | Msa1375130:CDS |
| CGCCGCTTGAGAATGTTGAA+GGG | 0.533893 | tig0019645:-3587 | Msa1375130:CDS |
| CATTCCAAAAGCTTACCAAC+CGG | 0.535445 | tig0019645:+2988 | None:intergenic |
| GTCTTTAAGAGTTTCTAACT+TGG | 0.540665 | tig0019645:+2612 | None:intergenic |
| ATGGACATATTCTTTGCTGC+CGG | 0.540988 | tig0019645:+3222 | None:intergenic |
| ATATCAAACCCAGCATAAAA+CGG | 0.541005 | tig0019645:+3441 | None:intergenic |
| AAATATGCTTTGTTGGATGA+GGG | 0.541599 | tig0019645:-2484 | Msa1375130:CDS |
| CAAAGTTACACATTTGAGGA+AGG | 0.543709 | tig0019645:-2557 | Msa1375130:CDS |
| GTCTGAGGAAGAAACAGACT+GGG | 0.543879 | tig0019645:-3265 | Msa1375130:CDS |
| CCAAAATCATTTGCATTCCA+CGG | 0.546391 | tig0019645:+3180 | None:intergenic |
| CACCCCTGTCCCTGAGAAGG+TGG | 0.552156 | tig0019645:-3793 | Msa1375130:CDS |
| GCCAGCCAACATGGAATCAA+AGG | 0.555175 | tig0019645:+2858 | None:intergenic |
| CTCCACCTTCTCAGGGACAG+GGG | 0.556845 | tig0019645:+3791 | None:intergenic |
| GATATTGCACGTTATCTTTG+GGG | 0.556924 | tig0019645:-3423 | Msa1375130:CDS |
| TTGATTTGGCATTGTCAGGA+CGG | 0.559182 | tig0019645:+3046 | None:intergenic |
| AACTCTTCTCCACCTTCTCA+GGG | 0.560013 | tig0019645:+3784 | None:intergenic |
| TTGTTGCGGGGAGGATAACG+TGG | 0.563860 | tig0019645:-3302 | Msa1375130:CDS |
| AGTGAGAATCATGAGAGAAG+AGG | 0.567837 | tig0019645:-2677 | Msa1375130:CDS |
| TCTTTACCGCAACAGGGTCA+GGG | 0.571861 | tig0019645:+3820 | None:intergenic |
| CAGTTCTGCTTGCAACCTCA+GGG | 0.574443 | tig0019645:-2904 | Msa1375130:CDS |
| ATGATTCTCACTTGTTCAGG+AGG | 0.576058 | tig0019645:+2688 | None:intergenic |
| AAAGAATATGTCCATGCTTG+TGG | 0.578138 | tig0019645:-3214 | Msa1375130:CDS |
| GAACCTGGATGGAAGAAGAC+AGG | 0.581328 | tig0019645:+2829 | None:intergenic |
| AACATCTGCATTATGCTGCT+GGG | 0.583163 | tig0019645:+2937 | None:intergenic |
| TCAATTGGCAGGACAGAATG+AGG | 0.584744 | tig0019645:-3110 | Msa1375130:CDS |
| AGGTATACAGCCAGCCAACA+TGG | 0.585934 | tig0019645:+2849 | None:intergenic |
| TGACAATGCCAAATCAATCA+GGG | 0.586683 | tig0019645:-3040 | Msa1375130:CDS |
| GAGTTTCTAACTTGGAGCGA+GGG | 0.588810 | tig0019645:+2620 | None:intergenic |
| ATCATGAGAGAAGAGGTCAT+TGG | 0.590128 | tig0019645:-2670 | Msa1375130:CDS |
| GTGGAGTATAATGAATGGGA+AGG | 0.593191 | tig0019645:-3334 | Msa1375130:CDS |
| GGGTTATAATATCTCGAGGA+GGG | 0.593478 | tig0019645:-3403 | Msa1375130:CDS |
| GGCTTATGAAGAGGCCGGAG+TGG | 0.594655 | tig0019645:-3353 | Msa1375130:CDS |
| GCCGCTTGAGAATGTTGAAG+GGG | 0.594748 | tig0019645:-3586 | Msa1375130:CDS |
| TGACACCCCTGTCCCTGAGA+AGG | 0.599705 | tig0019645:-3796 | Msa1375130:CDS |
| AGAGTTTCTAACTTGGAGCG+AGG | 0.604913 | tig0019645:+2619 | None:intergenic |
| GTGTGTATGCCGAACCTGGA+TGG | 0.606530 | tig0019645:+2818 | None:intergenic |
| CCTTCAACATTCTCAAGCGG+CGG | 0.606943 | tig0019645:+3588 | None:intergenic |
| GGTTGCGATGATTTAACTCG+AGG | 0.608916 | tig0019645:+3894 | None:intergenic |
| ACTCGACTCTACCACAAGCA+TGG | 0.610855 | tig0019645:+3203 | None:intergenic |
| TGACTGGCTTATGAAGAGGC+CGG | 0.613272 | tig0019645:-3358 | Msa1375130:CDS |
| CAATGTAGAAGTTCTCCGGT+TGG | 0.619092 | tig0019645:-3003 | Msa1375130:CDS |
| CTTTACCGCAACAGGGTCAG+GGG | 0.619249 | tig0019645:+3821 | None:intergenic |
| GTGATCATCAACAAATTGAG+TGG | 0.619603 | tig0019645:+3986 | None:intergenic |
| GATTTGGCATTGTCAGGACG+GGG | 0.620412 | tig0019645:+3048 | None:intergenic |
| TGACACCCCTGACCCTGTTG+CGG | 0.622233 | tig0019645:-3826 | Msa1375130:CDS |
| TGGTTGACTGGCTTATGAAG+AGG | 0.623329 | tig0019645:-3362 | Msa1375130:CDS |
| GATGAGGGAAAACACGAGGT+TGG | 0.623860 | tig0019645:-2469 | Msa1375130:CDS |
| CCATTCATTATACTCCACTC+CGG | 0.623909 | tig0019645:+3339 | None:intergenic |
| AATCATCGCAACCGCCTCCG+AGG | 0.627422 | tig0019645:-3884 | Msa1375130:CDS |
| ACCCCTTCAACATTCTCAAG+CGG | 0.628618 | tig0019645:+3585 | None:intergenic |
| GTATTCTGTCTTCATTCCAG+AGG | 0.633027 | tig0019645:-2761 | Msa1375130:CDS |
| ACAGAATGAGGCGATTAGAG+AGG | 0.639158 | tig0019645:-3098 | Msa1375130:CDS |
| TTTGGGGTTATAATATCTCG+AGG | 0.641133 | tig0019645:-3407 | Msa1375130:CDS |
| TTGATTGAATGCAAATGAGA+CGG | 0.643214 | tig0019645:-4172 | None:intergenic |
| TGTTGCGGGGAGGATAACGT+GGG | 0.647158 | tig0019645:-3301 | Msa1375130:CDS |
| AAGAAAGGATCCCATTCATG+AGG | 0.647321 | tig0019645:+2445 | None:intergenic |
| AATAAGAGTGATCCTTGTGG+GGG | 0.649379 | tig0019645:-3729 | Msa1375130:CDS |
| GGGGTTATAATATCTCGAGG+AGG | 0.650227 | tig0019645:-3404 | Msa1375130:CDS |
| GAAAATAAGAGTGATCCTTG+TGG | 0.653504 | tig0019645:-3732 | Msa1375130:CDS |
| AAATAAGAGTGATCCTTGTG+GGG | 0.657313 | tig0019645:-3730 | Msa1375130:CDS |
| GCAAATGAGACGGCGCCCTG+TGG | 0.665026 | tig0019645:-4162 | None:intergenic |
| GACAATGCCAAATCAATCAG+GGG | 0.665818 | tig0019645:-3039 | Msa1375130:CDS |
| TAAGAGGAACATGAGTATCG+AGG | 0.675462 | tig0019645:-2728 | Msa1375130:CDS |
| AGGGTGATTCATACACTCGA+AGG | 0.675831 | tig0019645:-2885 | Msa1375130:CDS |
| AGCTTCAGCAGATGAATCAG+TGG | 0.683333 | tig0019645:+2390 | None:intergenic |
| GTTGGATGAGGGAAAACACG+AGG | 0.683608 | tig0019645:-2473 | Msa1375130:CDS |
| TGTCACTCTTTACCGCAACA+GGG | 0.687983 | tig0019645:+3814 | None:intergenic |
| TTGTGGTAGAGTCGAGTCCG+TGG | 0.690146 | tig0019645:-3197 | Msa1375130:CDS |
| TGTCATTCTTTATCACAACA+GGG | 0.695657 | tig0019645:+3844 | None:intergenic |
| CTGAGGAAGAAACAGACTGG+GGG | 0.706384 | tig0019645:-3263 | Msa1375130:CDS |
| ATAAGAGTGATCCTTGTGGG+GGG | 0.715435 | tig0019645:-3728 | Msa1375130:CDS |
| TCTGAGGAAGAAACAGACTG+GGG | 0.732806 | tig0019645:-3264 | Msa1375130:CDS |
| GCAGTATGAGTGCTTGACTG+AGG | 0.734277 | tig0019645:-3493 | Msa1375130:CDS |
| CGAGTGTATGAATCACCCTG+AGG | 0.742346 | tig0019645:+2889 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATGTTATATTTAGCAAT+AGG | - | tig0019645:2985-3004 | Msa1375130:CDS | 20.0% |
| !! | TATTGATAAAAACTTCATTG+AGG | - | tig0019645:3988-4007 | Msa1375130:CDS | 20.0% |
| !! | TTGATGTTATATTTAGCAAT+AGG | - | tig0019645:2985-3004 | Msa1375130:CDS | 20.0% |
| !! | TATTGATAAAAACTTCATTG+AGG | - | tig0019645:3988-4007 | Msa1375130:CDS | 20.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | + | tig0019645:2595-2614 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | + | tig0019645:3731-3750 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | + | tig0019645:4079-4098 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | - | tig0019645:4082-4101 | Msa1375130:CDS | 25.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | + | tig0019645:2595-2614 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | + | tig0019645:3731-3750 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | + | tig0019645:4079-4098 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | - | tig0019645:4082-4101 | Msa1375130:CDS | 25.0% |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | - | tig0019645:2436-2455 | Msa1375130:CDS | 30.0% |
| TAGTAGTATTATCAGCTCTA+AGG | + | tig0019645:2491-2510 | None:intergenic | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | + | tig0019645:2561-2580 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | + | tig0019645:2596-2615 | None:intergenic | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | + | tig0019645:2665-2684 | None:intergenic | 30.0% | |
| ! | GTTTTCAACGCTTTCATAAA+AGG | + | tig0019645:2750-2769 | None:intergenic | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | - | tig0019645:2750-2769 | Msa1375130:CDS | 30.0% |
| AAAATAAGAGTGATCCTTGT+GGG | - | tig0019645:2775-2794 | Msa1375130:CDS | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | + | tig0019645:2828-2847 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | - | tig0019645:2833-2852 | Msa1375130:CDS | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | - | tig0019645:2856-2875 | Msa1375130:CDS | 30.0% | |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | - | tig0019645:3056-3075 | Msa1375130:CDS | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | - | tig0019645:3057-3076 | Msa1375130:CDS | 30.0% |
| ATATCAAACCCAGCATAAAA+CGG | + | tig0019645:3068-3087 | None:intergenic | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | - | tig0019645:3081-3100 | Msa1375130:CDS | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | - | tig0019645:3082-3101 | Msa1375130:CDS | 30.0% | |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | - | tig0019645:3265-3284 | Msa1375130:CDS | 30.0% |
| ! | GTCTTTAAGAGTTTCTAACT+TGG | + | tig0019645:3897-3916 | None:intergenic | 30.0% |
| TTGACAAAGTTACACATTTG+AGG | - | tig0019645:3945-3964 | Msa1375130:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | - | tig0019645:4022-4041 | Msa1375130:CDS | 30.0% |
| AAACCAAAAAATGATGGTAG+TGG | - | tig0019645:4088-4107 | Msa1375130:CDS | 30.0% | |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | - | tig0019645:2436-2455 | Msa1375130:CDS | 30.0% |
| TAGTAGTATTATCAGCTCTA+AGG | + | tig0019645:2491-2510 | None:intergenic | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | + | tig0019645:2561-2580 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | + | tig0019645:2596-2615 | None:intergenic | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | + | tig0019645:2665-2684 | None:intergenic | 30.0% | |
| ! | GTTTTCAACGCTTTCATAAA+AGG | + | tig0019645:2750-2769 | None:intergenic | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | - | tig0019645:2750-2769 | Msa1375130:CDS | 30.0% |
| AAAATAAGAGTGATCCTTGT+GGG | - | tig0019645:2775-2794 | Msa1375130:CDS | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | + | tig0019645:2828-2847 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | - | tig0019645:2833-2852 | Msa1375130:CDS | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | - | tig0019645:2856-2875 | Msa1375130:CDS | 30.0% | |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | - | tig0019645:3056-3075 | Msa1375130:CDS | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | - | tig0019645:3057-3076 | Msa1375130:CDS | 30.0% |
| ATATCAAACCCAGCATAAAA+CGG | + | tig0019645:3068-3087 | None:intergenic | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | - | tig0019645:3081-3100 | Msa1375130:CDS | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | - | tig0019645:3082-3101 | Msa1375130:CDS | 30.0% | |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | - | tig0019645:3265-3284 | Msa1375130:CDS | 30.0% |
| ! | GTCTTTAAGAGTTTCTAACT+TGG | + | tig0019645:3897-3916 | None:intergenic | 30.0% |
| TTGACAAAGTTACACATTTG+AGG | - | tig0019645:3945-3964 | Msa1375130:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | - | tig0019645:4022-4041 | Msa1375130:CDS | 30.0% |
| AAACCAAAAAATGATGGTAG+TGG | - | tig0019645:4088-4107 | Msa1375130:CDS | 30.0% | |
| GTGATCATCAACAAATTGAG+TGG | + | tig0019645:2523-2542 | None:intergenic | 35.0% | |
| !! | AACAGAAACAGGTGTTGATT+TGG | + | tig0019645:2550-2569 | None:intergenic | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | + | tig0019645:2666-2685 | None:intergenic | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | + | tig0019645:2772-2791 | None:intergenic | 35.0% |
| GAAAATAAGAGTGATCCTTG+TGG | - | tig0019645:2774-2793 | Msa1375130:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | - | tig0019645:2776-2795 | Msa1375130:CDS | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | - | tig0019645:2821-2840 | Msa1375130:CDS | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | - | tig0019645:2888-2907 | Msa1375130:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | - | tig0019645:3083-3102 | Msa1375130:CDS | 35.0% | |
| ! | TTTGGGGTTATAATATCTCG+AGG | - | tig0019645:3099-3118 | Msa1375130:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | - | tig0019645:3190-3209 | Msa1375130:CDS | 35.0% |
| ! | AAGGATCATTTTCTTGTTGC+GGG | - | tig0019645:3191-3210 | Msa1375130:CDS | 35.0% |
| AAAGAATATGTCCATGCTTG+TGG | - | tig0019645:3292-3311 | Msa1375130:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | + | tig0019645:3329-3348 | None:intergenic | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | - | tig0019645:3381-3400 | Msa1375130:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | - | tig0019645:3466-3485 | Msa1375130:CDS | 35.0% | |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | - | tig0019645:3527-3546 | Msa1375130:CDS | 35.0% |
| TGGAATGAAGACAGAATACT+TGG | + | tig0019645:3744-3763 | None:intergenic | 35.0% | |
| !! | ATGAGTATCGAGGAAATACT+TGG | - | tig0019645:3788-3807 | Msa1375130:CDS | 35.0% |
| CAAAGTTACACATTTGAGGA+AGG | - | tig0019645:3949-3968 | Msa1375130:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | - | tig0019645:4015-4034 | Msa1375130:CDS | 35.0% | |
| ! | GAAATATGCTTTGTTGGATG+AGG | - | tig0019645:4021-4040 | Msa1375130:CDS | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | + | tig0019645:4094-4113 | None:intergenic | 35.0% |
| CTGAAGCTGCAAAAAATTCT+TGG | - | tig0019645:4131-4150 | Msa1375130:CDS | 35.0% | |
| GTGATCATCAACAAATTGAG+TGG | + | tig0019645:2523-2542 | None:intergenic | 35.0% | |
| !! | AACAGAAACAGGTGTTGATT+TGG | + | tig0019645:2550-2569 | None:intergenic | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | + | tig0019645:2666-2685 | None:intergenic | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | + | tig0019645:2772-2791 | None:intergenic | 35.0% |
| GAAAATAAGAGTGATCCTTG+TGG | - | tig0019645:2774-2793 | Msa1375130:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | - | tig0019645:2776-2795 | Msa1375130:CDS | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | - | tig0019645:2821-2840 | Msa1375130:CDS | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | - | tig0019645:2888-2907 | Msa1375130:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | - | tig0019645:3083-3102 | Msa1375130:CDS | 35.0% | |
| ! | TTTGGGGTTATAATATCTCG+AGG | - | tig0019645:3099-3118 | Msa1375130:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | - | tig0019645:3190-3209 | Msa1375130:CDS | 35.0% |
| ! | AAGGATCATTTTCTTGTTGC+GGG | - | tig0019645:3191-3210 | Msa1375130:CDS | 35.0% |
| AAAGAATATGTCCATGCTTG+TGG | - | tig0019645:3292-3311 | Msa1375130:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | + | tig0019645:3329-3348 | None:intergenic | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | - | tig0019645:3381-3400 | Msa1375130:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | - | tig0019645:3466-3485 | Msa1375130:CDS | 35.0% | |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | - | tig0019645:3527-3546 | Msa1375130:CDS | 35.0% |
| TGGAATGAAGACAGAATACT+TGG | + | tig0019645:3744-3763 | None:intergenic | 35.0% | |
| !! | ATGAGTATCGAGGAAATACT+TGG | - | tig0019645:3788-3807 | Msa1375130:CDS | 35.0% |
| CAAAGTTACACATTTGAGGA+AGG | - | tig0019645:3949-3968 | Msa1375130:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | - | tig0019645:4015-4034 | Msa1375130:CDS | 35.0% | |
| ! | GAAATATGCTTTGTTGGATG+AGG | - | tig0019645:4021-4040 | Msa1375130:CDS | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | + | tig0019645:4094-4113 | None:intergenic | 35.0% |
| CTGAAGCTGCAAAAAATTCT+TGG | - | tig0019645:4131-4150 | Msa1375130:CDS | 35.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | - | tig0019645:2376-2395 | Msa1375130:CDS | 40.0% | |
| ! | TTGATCCCCCTTTTTCCATT+TGG | + | tig0019645:2386-2405 | None:intergenic | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | + | tig0019645:2642-2661 | None:intergenic | 40.0% |
| TTCTTTATCACAACAGGGTC+AGG | + | tig0019645:2660-2679 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | - | tig0019645:2777-2796 | Msa1375130:CDS | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | - | tig0019645:2811-2830 | Msa1375130:CDS | 40.0% | |
| ! | TTTACTACCAATGCTGGTCT+TGG | - | tig0019645:2894-2913 | Msa1375130:CDS | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | - | tig0019645:2895-2914 | Msa1375130:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | - | tig0019645:2929-2948 | Msa1375130:CDS | 40.0% |
| GTATGCGACAAATCAGTTTG+CGG | - | tig0019645:2962-2981 | Msa1375130:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | - | tig0019645:3103-3122 | Msa1375130:CDS | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | + | tig0019645:3170-3189 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | - | tig0019645:3168-3187 | Msa1375130:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | - | tig0019645:3172-3191 | Msa1375130:CDS | 40.0% | |
| ! | AGGATCATTTTCTTGTTGCG+GGG | - | tig0019645:3192-3211 | Msa1375130:CDS | 40.0% |
| ATGGACATATTCTTTGCTGC+CGG | + | tig0019645:3287-3306 | None:intergenic | 40.0% | |
| ! | CCGTGGAATGCAAATGATTT+TGG | - | tig0019645:3326-3345 | Msa1375130:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | + | tig0019645:3376-3395 | None:intergenic | 40.0% |
| ! | AACACATCAGCATCTTTTGC+AGG | + | tig0019645:3377-3396 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | - | tig0019645:3431-3450 | Msa1375130:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | + | tig0019645:3463-3482 | None:intergenic | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | + | tig0019645:3467-3486 | None:intergenic | 40.0% |
| CTGACAATGCCAAATCAATC+AGG | - | tig0019645:3465-3484 | Msa1375130:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | - | tig0019645:3467-3486 | Msa1375130:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | + | tig0019645:3477-3496 | None:intergenic | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | - | tig0019645:3499-3518 | Msa1375130:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | + | tig0019645:3521-3540 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | + | tig0019645:3572-3591 | None:intergenic | 40.0% | |
| AAACATCTGCATTATGCTGC+TGG | + | tig0019645:3573-3592 | None:intergenic | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | - | tig0019645:3745-3764 | Msa1375130:CDS | 40.0% | |
| ! | TAAGAGGAACATGAGTATCG+AGG | - | tig0019645:3778-3797 | Msa1375130:CDS | 40.0% |
| ATGATTCTCACTTGTTCAGG+AGG | + | tig0019645:3821-3840 | None:intergenic | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | + | tig0019645:3824-3843 | None:intergenic | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | - | tig0019645:3829-3848 | Msa1375130:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | - | tig0019645:3836-3855 | Msa1375130:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | - | tig0019645:3999-4018 | Msa1375130:CDS | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | + | tig0019645:4064-4083 | None:intergenic | 40.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | - | tig0019645:2376-2395 | Msa1375130:CDS | 40.0% | |
| ! | TTGATCCCCCTTTTTCCATT+TGG | + | tig0019645:2386-2405 | None:intergenic | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | + | tig0019645:2642-2661 | None:intergenic | 40.0% |
| TTCTTTATCACAACAGGGTC+AGG | + | tig0019645:2660-2679 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | - | tig0019645:2777-2796 | Msa1375130:CDS | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | - | tig0019645:2811-2830 | Msa1375130:CDS | 40.0% | |
| ! | TTTACTACCAATGCTGGTCT+TGG | - | tig0019645:2894-2913 | Msa1375130:CDS | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | - | tig0019645:2895-2914 | Msa1375130:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | - | tig0019645:2929-2948 | Msa1375130:CDS | 40.0% |
| GTATGCGACAAATCAGTTTG+CGG | - | tig0019645:2962-2981 | Msa1375130:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | - | tig0019645:3103-3122 | Msa1375130:CDS | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | + | tig0019645:3170-3189 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | - | tig0019645:3168-3187 | Msa1375130:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | - | tig0019645:3172-3191 | Msa1375130:CDS | 40.0% | |
| ! | AGGATCATTTTCTTGTTGCG+GGG | - | tig0019645:3192-3211 | Msa1375130:CDS | 40.0% |
| ATGGACATATTCTTTGCTGC+CGG | + | tig0019645:3287-3306 | None:intergenic | 40.0% | |
| ! | CCGTGGAATGCAAATGATTT+TGG | - | tig0019645:3326-3345 | Msa1375130:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | + | tig0019645:3376-3395 | None:intergenic | 40.0% |
| ! | AACACATCAGCATCTTTTGC+AGG | + | tig0019645:3377-3396 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | - | tig0019645:3431-3450 | Msa1375130:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | + | tig0019645:3463-3482 | None:intergenic | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | + | tig0019645:3467-3486 | None:intergenic | 40.0% |
| CTGACAATGCCAAATCAATC+AGG | - | tig0019645:3465-3484 | Msa1375130:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | - | tig0019645:3467-3486 | Msa1375130:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | + | tig0019645:3477-3496 | None:intergenic | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | - | tig0019645:3499-3518 | Msa1375130:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | + | tig0019645:3521-3540 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | + | tig0019645:3572-3591 | None:intergenic | 40.0% | |
| AAACATCTGCATTATGCTGC+TGG | + | tig0019645:3573-3592 | None:intergenic | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | - | tig0019645:3745-3764 | Msa1375130:CDS | 40.0% | |
| ! | TAAGAGGAACATGAGTATCG+AGG | - | tig0019645:3778-3797 | Msa1375130:CDS | 40.0% |
| ATGATTCTCACTTGTTCAGG+AGG | + | tig0019645:3821-3840 | None:intergenic | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | + | tig0019645:3824-3843 | None:intergenic | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | - | tig0019645:3829-3848 | Msa1375130:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | - | tig0019645:3836-3855 | Msa1375130:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | - | tig0019645:3999-4018 | Msa1375130:CDS | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | + | tig0019645:4064-4083 | None:intergenic | 40.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | - | tig0019645:2375-2394 | Msa1375130:CDS | 45.0% | |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | + | tig0019645:2380-2399 | None:intergenic | 45.0% |
| CCCTGACCAAATGGAAAAAG+GGG | - | tig0019645:2377-2396 | Msa1375130:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | - | tig0019645:2378-2397 | Msa1375130:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | + | tig0019645:2615-2634 | None:intergenic | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | + | tig0019645:2695-2714 | None:intergenic | 45.0% | |
| AACTCTTCTCCACCTTCTCA+GGG | + | tig0019645:2725-2744 | None:intergenic | 45.0% | |
| AAACTCTTCTCCACCTTCTC+AGG | + | tig0019645:2726-2745 | None:intergenic | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | - | tig0019645:2778-2797 | Msa1375130:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | + | tig0019645:2792-2811 | None:intergenic | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | + | tig0019645:2924-2943 | None:intergenic | 45.0% | |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | - | tig0019645:2935-2954 | Msa1375130:CDS | 45.0% |
| GGGGTTATAATATCTCGAGG+AGG | - | tig0019645:3102-3121 | Msa1375130:CDS | 45.0% | |
| TAATATCTCGAGGAGGGATG+CGG | - | tig0019645:3109-3128 | Msa1375130:CDS | 45.0% | |
| !! | TGGTTGACTGGCTTATGAAG+AGG | - | tig0019645:3144-3163 | Msa1375130:CDS | 45.0% |
| CCGGAGTGGAGTATAATGAA+TGG | - | tig0019645:3167-3186 | Msa1375130:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | - | tig0019645:3195-3214 | Msa1375130:CDS | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | - | tig0019645:3213-3232 | Msa1375130:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | - | tig0019645:3226-3245 | Msa1375130:CDS | 45.0% |
| TGTCTGAGGAAGAAACAGAC+TGG | - | tig0019645:3240-3259 | Msa1375130:CDS | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | - | tig0019645:3241-3260 | Msa1375130:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | - | tig0019645:3242-3261 | Msa1375130:CDS | 45.0% | |
| ! | GGGTGGAAGTATGTAGGATA+AGG | + | tig0019645:3356-3375 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | + | tig0019645:3362-3381 | None:intergenic | 45.0% |
| TGCTGATGTGTTCAATTGGC+AGG | - | tig0019645:3385-3404 | Msa1375130:CDS | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | - | tig0019645:3396-3415 | Msa1375130:CDS | 45.0% | |
| ACAGAATGAGGCGATTAGAG+AGG | - | tig0019645:3408-3427 | Msa1375130:CDS | 45.0% | |
| ! | TGATTTGGCATTGTCAGGAC+GGG | + | tig0019645:3462-3481 | None:intergenic | 45.0% |
| CAATGTAGAAGTTCTCCGGT+TGG | - | tig0019645:3503-3522 | Msa1375130:CDS | 45.0% | |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | - | tig0019645:3514-3533 | Msa1375130:CDS | 45.0% |
| AGGGTGATTCATACACTCGA+AGG | - | tig0019645:3621-3640 | Msa1375130:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | - | tig0019645:3643-3662 | Msa1375130:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | - | tig0019645:3674-3693 | Msa1375130:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | - | tig0019645:3679-3698 | Msa1375130:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | - | tig0019645:3699-3718 | Msa1375130:CDS | 45.0% | |
| ! | GGGTCAGCATATACTAGTCT+TGG | + | tig0019645:3869-3888 | None:intergenic | 45.0% |
| GAGTTTCTAACTTGGAGCGA+GGG | + | tig0019645:3889-3908 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | + | tig0019645:3890-3909 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | + | tig0019645:4119-4138 | None:intergenic | 45.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | - | tig0019645:2375-2394 | Msa1375130:CDS | 45.0% | |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | + | tig0019645:2380-2399 | None:intergenic | 45.0% |
| CCCTGACCAAATGGAAAAAG+GGG | - | tig0019645:2377-2396 | Msa1375130:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | - | tig0019645:2378-2397 | Msa1375130:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | + | tig0019645:2615-2634 | None:intergenic | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | + | tig0019645:2695-2714 | None:intergenic | 45.0% | |
| AACTCTTCTCCACCTTCTCA+GGG | + | tig0019645:2725-2744 | None:intergenic | 45.0% | |
| AAACTCTTCTCCACCTTCTC+AGG | + | tig0019645:2726-2745 | None:intergenic | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | - | tig0019645:2778-2797 | Msa1375130:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | + | tig0019645:2792-2811 | None:intergenic | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | + | tig0019645:2924-2943 | None:intergenic | 45.0% | |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | - | tig0019645:2935-2954 | Msa1375130:CDS | 45.0% |
| GGGGTTATAATATCTCGAGG+AGG | - | tig0019645:3102-3121 | Msa1375130:CDS | 45.0% | |
| TAATATCTCGAGGAGGGATG+CGG | - | tig0019645:3109-3128 | Msa1375130:CDS | 45.0% | |
| !! | TGGTTGACTGGCTTATGAAG+AGG | - | tig0019645:3144-3163 | Msa1375130:CDS | 45.0% |
| CCGGAGTGGAGTATAATGAA+TGG | - | tig0019645:3167-3186 | Msa1375130:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | - | tig0019645:3195-3214 | Msa1375130:CDS | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | - | tig0019645:3213-3232 | Msa1375130:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | - | tig0019645:3226-3245 | Msa1375130:CDS | 45.0% |
| TGTCTGAGGAAGAAACAGAC+TGG | - | tig0019645:3240-3259 | Msa1375130:CDS | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | - | tig0019645:3241-3260 | Msa1375130:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | - | tig0019645:3242-3261 | Msa1375130:CDS | 45.0% | |
| ! | GGGTGGAAGTATGTAGGATA+AGG | + | tig0019645:3356-3375 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | + | tig0019645:3362-3381 | None:intergenic | 45.0% |
| TGCTGATGTGTTCAATTGGC+AGG | - | tig0019645:3385-3404 | Msa1375130:CDS | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | - | tig0019645:3396-3415 | Msa1375130:CDS | 45.0% | |
| ACAGAATGAGGCGATTAGAG+AGG | - | tig0019645:3408-3427 | Msa1375130:CDS | 45.0% | |
| ! | TGATTTGGCATTGTCAGGAC+GGG | + | tig0019645:3462-3481 | None:intergenic | 45.0% |
| CAATGTAGAAGTTCTCCGGT+TGG | - | tig0019645:3503-3522 | Msa1375130:CDS | 45.0% | |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | - | tig0019645:3514-3533 | Msa1375130:CDS | 45.0% |
| AGGGTGATTCATACACTCGA+AGG | - | tig0019645:3621-3640 | Msa1375130:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | - | tig0019645:3643-3662 | Msa1375130:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | - | tig0019645:3674-3693 | Msa1375130:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | - | tig0019645:3679-3698 | Msa1375130:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | - | tig0019645:3699-3718 | Msa1375130:CDS | 45.0% | |
| ! | GGGTCAGCATATACTAGTCT+TGG | + | tig0019645:3869-3888 | None:intergenic | 45.0% |
| GAGTTTCTAACTTGGAGCGA+GGG | + | tig0019645:3889-3908 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | + | tig0019645:3890-3909 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | + | tig0019645:4119-4138 | None:intergenic | 45.0% | |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | + | tig0019645:2381-2400 | None:intergenic | 50.0% |
| AACCGCCTCCGAGGAAAATT+GGG | - | tig0019645:2631-2650 | Msa1375130:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | + | tig0019645:2636-2655 | None:intergenic | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | + | tig0019645:2639-2658 | None:intergenic | 50.0% |
| TCTTTACCGCAACAGGGTCA+GGG | + | tig0019645:2689-2708 | None:intergenic | 50.0% | |
| ! | GTGTCACTCTTTACCGCAAC+AGG | + | tig0019645:2696-2715 | None:intergenic | 50.0% |
| CCTTCAACATTCTCAAGCGG+CGG | + | tig0019645:2921-2940 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | - | tig0019645:2919-2938 | Msa1375130:CDS | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | - | tig0019645:2920-2939 | Msa1375130:CDS | 50.0% | |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | - | tig0019645:2936-2955 | Msa1375130:CDS | 50.0% |
| GCAGTATGAGTGCTTGACTG+AGG | - | tig0019645:3013-3032 | Msa1375130:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | - | tig0019645:3132-3151 | Msa1375130:CDS | 50.0% | |
| !! | TGACTGGCTTATGAAGAGGC+CGG | - | tig0019645:3148-3167 | Msa1375130:CDS | 50.0% |
| CTGAGGAAGAAACAGACTGG+GGG | - | tig0019645:3243-3262 | Msa1375130:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | + | tig0019645:3306-3325 | None:intergenic | 50.0% | |
| ! | CATCAGCATCTTTTGCAGGG+TGG | + | tig0019645:3373-3392 | None:intergenic | 50.0% |
| TGAGGCGATTAGAGAGGAAG+TGG | - | tig0019645:3414-3433 | Msa1375130:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | + | tig0019645:3461-3480 | None:intergenic | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | - | tig0019645:3601-3620 | Msa1375130:CDS | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | - | tig0019645:3602-3621 | Msa1375130:CDS | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | + | tig0019645:3620-3639 | None:intergenic | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | - | tig0019645:3647-3666 | Msa1375130:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | + | tig0019645:3651-3670 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | + | tig0019645:3660-3679 | None:intergenic | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | + | tig0019645:3680-3699 | None:intergenic | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | + | tig0019645:3695-3714 | None:intergenic | 50.0% | |
| CTCTTACGAATGTCGTCCTC+TGG | + | tig0019645:3764-3783 | None:intergenic | 50.0% | |
| CAGAGGACGACATTCGTAAG+AGG | - | tig0019645:3762-3781 | Msa1375130:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | - | tig0019645:4033-4052 | Msa1375130:CDS | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | - | tig0019645:4037-4056 | Msa1375130:CDS | 50.0% | |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | - | tig0019645:4050-4069 | Msa1375130:CDS | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | - | tig0019645:4051-4070 | Msa1375130:CDS | 50.0% |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | + | tig0019645:2381-2400 | None:intergenic | 50.0% |
| AACCGCCTCCGAGGAAAATT+GGG | - | tig0019645:2631-2650 | Msa1375130:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | + | tig0019645:2636-2655 | None:intergenic | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | + | tig0019645:2639-2658 | None:intergenic | 50.0% |
| TCTTTACCGCAACAGGGTCA+GGG | + | tig0019645:2689-2708 | None:intergenic | 50.0% | |
| ! | GTGTCACTCTTTACCGCAAC+AGG | + | tig0019645:2696-2715 | None:intergenic | 50.0% |
| CCTTCAACATTCTCAAGCGG+CGG | + | tig0019645:2921-2940 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | - | tig0019645:2919-2938 | Msa1375130:CDS | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | - | tig0019645:2920-2939 | Msa1375130:CDS | 50.0% | |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | - | tig0019645:2936-2955 | Msa1375130:CDS | 50.0% |
| GCAGTATGAGTGCTTGACTG+AGG | - | tig0019645:3013-3032 | Msa1375130:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | - | tig0019645:3132-3151 | Msa1375130:CDS | 50.0% | |
| !! | TGACTGGCTTATGAAGAGGC+CGG | - | tig0019645:3148-3167 | Msa1375130:CDS | 50.0% |
| CTGAGGAAGAAACAGACTGG+GGG | - | tig0019645:3243-3262 | Msa1375130:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | + | tig0019645:3306-3325 | None:intergenic | 50.0% | |
| ! | CATCAGCATCTTTTGCAGGG+TGG | + | tig0019645:3373-3392 | None:intergenic | 50.0% |
| TGAGGCGATTAGAGAGGAAG+TGG | - | tig0019645:3414-3433 | Msa1375130:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | + | tig0019645:3461-3480 | None:intergenic | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | - | tig0019645:3601-3620 | Msa1375130:CDS | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | - | tig0019645:3602-3621 | Msa1375130:CDS | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | + | tig0019645:3620-3639 | None:intergenic | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | - | tig0019645:3647-3666 | Msa1375130:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | + | tig0019645:3651-3670 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | + | tig0019645:3660-3679 | None:intergenic | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | + | tig0019645:3680-3699 | None:intergenic | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | + | tig0019645:3695-3714 | None:intergenic | 50.0% | |
| CTCTTACGAATGTCGTCCTC+TGG | + | tig0019645:3764-3783 | None:intergenic | 50.0% | |
| CAGAGGACGACATTCGTAAG+AGG | - | tig0019645:3762-3781 | Msa1375130:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | - | tig0019645:4033-4052 | Msa1375130:CDS | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | - | tig0019645:4037-4056 | Msa1375130:CDS | 50.0% | |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | - | tig0019645:4050-4069 | Msa1375130:CDS | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | - | tig0019645:4051-4070 | Msa1375130:CDS | 50.0% |
| CAACCGCCTCCGAGGAAAAT+TGG | - | tig0019645:2630-2649 | Msa1375130:CDS | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | + | tig0019645:2688-2707 | None:intergenic | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | + | tig0019645:2690-2709 | None:intergenic | 55.0% | |
| TCTCCACCTTCTCAGGGACA+GGG | + | tig0019645:2719-2738 | None:intergenic | 55.0% | |
| TTCTCCACCTTCTCAGGGAC+AGG | + | tig0019645:2720-2739 | None:intergenic | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | - | tig0019645:2918-2937 | Msa1375130:CDS | 55.0% | |
| ! | GGGTTTTCTCGGATACGGGT+TGG | - | tig0019645:2940-2959 | Msa1375130:CDS | 55.0% |
| TTGTTGCGGGGAGGATAACG+TGG | - | tig0019645:3204-3223 | Msa1375130:CDS | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | - | tig0019645:3205-3224 | Msa1375130:CDS | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | - | tig0019645:3309-3328 | Msa1375130:CDS | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | + | tig0019645:3691-3710 | None:intergenic | 55.0% | |
| CAACCGCCTCCGAGGAAAAT+TGG | - | tig0019645:2630-2649 | Msa1375130:CDS | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | + | tig0019645:2688-2707 | None:intergenic | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | + | tig0019645:2690-2709 | None:intergenic | 55.0% | |
| TCTCCACCTTCTCAGGGACA+GGG | + | tig0019645:2719-2738 | None:intergenic | 55.0% | |
| TTCTCCACCTTCTCAGGGAC+AGG | + | tig0019645:2720-2739 | None:intergenic | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | - | tig0019645:2918-2937 | Msa1375130:CDS | 55.0% | |
| ! | GGGTTTTCTCGGATACGGGT+TGG | - | tig0019645:2940-2959 | Msa1375130:CDS | 55.0% |
| TTGTTGCGGGGAGGATAACG+TGG | - | tig0019645:3204-3223 | Msa1375130:CDS | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | - | tig0019645:3205-3224 | Msa1375130:CDS | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | - | tig0019645:3309-3328 | Msa1375130:CDS | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | + | tig0019645:3691-3710 | None:intergenic | 55.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | - | tig0019645:2368-2387 | Msa1375130:CDS | 60.0% | |
| AATCATCGCAACCGCCTCCG+AGG | - | tig0019645:2622-2641 | Msa1375130:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | - | tig0019645:2680-2699 | Msa1375130:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | - | tig0019645:2710-2729 | Msa1375130:CDS | 60.0% | |
| CTCCACCTTCTCAGGGACAG+GGG | + | tig0019645:2718-2737 | None:intergenic | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | - | tig0019645:2781-2800 | Msa1375130:CDS | 60.0% | |
| GGATGCGGCTTCGCTTGATC+TGG | - | tig0019645:3124-3143 | Msa1375130:CDS | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | - | tig0019645:3153-3172 | Msa1375130:CDS | 60.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | - | tig0019645:2368-2387 | Msa1375130:CDS | 60.0% | |
| AATCATCGCAACCGCCTCCG+AGG | - | tig0019645:2622-2641 | Msa1375130:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | - | tig0019645:2680-2699 | Msa1375130:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | - | tig0019645:2710-2729 | Msa1375130:CDS | 60.0% | |
| CTCCACCTTCTCAGGGACAG+GGG | + | tig0019645:2718-2737 | None:intergenic | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | - | tig0019645:2781-2800 | Msa1375130:CDS | 60.0% | |
| GGATGCGGCTTCGCTTGATC+TGG | - | tig0019645:3124-3143 | Msa1375130:CDS | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | - | tig0019645:3153-3172 | Msa1375130:CDS | 60.0% | |
| CACCCCTGTCCCTGAGAAGG+TGG | - | tig0019645:2713-2732 | Msa1375130:CDS | 65.0% | |
| CACCCCTGTCCCTGAGAAGG+TGG | - | tig0019645:2713-2732 | Msa1375130:CDS | 65.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | - | tig0019645:2348-2367 | Msa1375130:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | + | tig0019645:2362-2381 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | + | tig0019645:2363-2382 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | + | tig0019645:2904-2923 | None:intergenic | 70.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | - | tig0019645:2348-2367 | Msa1375130:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | + | tig0019645:2362-2381 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | + | tig0019645:2363-2382 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | + | tig0019645:2904-2923 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019645 | gene | 2348 | 4180 | 2348 | ID=Msa1375130;Name=Msa1375130 |
| tig0019645 | mRNA | 2348 | 4180 | 2348 | ID=Msa1375130-mRNA-1;Parent=Msa1375130;Name=Msa1375130-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|610 |
| tig0019645 | exon | 2348 | 4180 | 2348 | ID=Msa1375130-mRNA-1:exon:4402;Parent=Msa1375130-mRNA-1 |
| tig0019645 | CDS | 2348 | 4180 | 2348 | ID=Msa1375130-mRNA-1:cds;Parent=Msa1375130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
