AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0560250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0560250 MtrunA17_Chr4g0050251 94.645 691 33 2 1 691 1 687 0.0 1345
Msa0560250 MtrunA17_Chr4g0050261 88.493 730 41 2 1 689 1 728 0.0 1317
Msa0560250 MtrunA17_Chr4g0026731 82.609 598 78 3 108 682 12 606 0.0 1012
Msa0560250 MtrunA17_Chr4g0050291 74.208 663 162 5 34 691 7 665 0.0 1005
Msa0560250 MtrunA17_Chr4g0050221 60.488 615 236 7 47 660 5 613 0.0 771
Msa0560250 MtrunA17_Chr4g0050201 59.232 547 212 7 115 658 2 540 0.0 670
Msa0560250 MtrunA17_Chr6g0477811 51.729 665 290 11 32 675 22 676 0.0 654
Msa0560250 MtrunA17_Chr4g0039261 48.631 621 302 4 52 660 28 643 0.0 609
Msa0560250 MtrunA17_Chr4g0039251 46.434 687 337 9 12 680 26 699 0.0 573
Msa0560250 MtrunA17_Chr4g0039231 41.308 627 293 7 117 680 2 616 1.93e-161 479
Msa0560250 MtrunA17_Chr2g0327241 37.745 612 359 8 49 650 101 700 2.56e-133 409
Msa0560250 MtrunA17_Chr2g0316301 30.964 591 375 12 66 650 64 627 2.51e-82 273
Msa0560250 MtrunA17_Chr8g0384391 31.000 600 390 11 65 651 46 634 7.64e-82 272
Msa0560250 MtrunA17_Chr3g0130331 31.588 592 383 12 71 651 54 634 1.22e-77 261
Msa0560250 MtrunA17_Chr1g0176451 32.195 615 353 20 53 645 4 576 3.18e-76 256
Msa0560250 MtrunA17_Chr1g0213091 30.616 552 341 7 72 593 119 658 3.16e-74 254
Msa0560250 MtrunA17_Chr7g0263351 30.699 544 347 9 70 594 122 654 3.91e-74 254
Msa0560250 MtrunA17_Chr1g0208391 30.000 620 401 13 49 658 67 663 1.14e-71 246
Msa0560250 MtrunA17_Chr4g0065231 28.376 585 387 12 74 650 74 634 8.92e-71 242
Msa0560250 MtrunA17_Chr1g0176441 31.261 579 349 20 55 603 149 708 4.76e-69 240
Msa0560250 MtrunA17_Chr1g0200651 31.074 605 363 18 75 652 90 667 5.16e-69 238
Msa0560250 MtrunA17_Chr7g0267971 30.743 579 362 17 55 608 138 702 9.14e-68 236
Msa0560250 MtrunA17_Chr5g0408061 29.612 618 387 15 54 651 46 635 1.69e-67 233
Msa0560250 MtrunA17_Chr1g0202431 29.730 592 375 15 75 657 50 609 2.73e-64 224
Msa0560250 MtrunA17_Chr1g0198931 29.851 603 368 20 73 651 105 676 7.63e-64 224
Msa0560250 MtrunA17_Chr5g0446901 33.594 512 304 15 70 560 104 600 1.86e-61 216
Msa0560250 MtrunA17_Chr8g0359931 27.970 665 415 19 22 656 3 633 1.16e-59 212
Msa0560250 MtrunA17_Chr3g0102731 33.626 455 270 9 75 512 98 537 6.21e-58 206
Msa0560250 MtrunA17_Chr4g0003981 27.150 593 390 16 75 652 866 1431 5.18e-54 201
Msa0560250 MtrunA17_Chr4g0003981 24.165 629 420 13 65 650 163 777 3.80e-39 155
Msa0560250 MtrunA17_Chr7g0261971 27.434 565 359 15 75 618 875 1409 1.29e-52 197
Msa0560250 MtrunA17_Chr7g0261971 25.619 687 429 20 45 674 118 779 1.74e-43 169
Msa0560250 MtrunA17_Chr2g0332221 26.700 603 379 17 75 651 855 1420 2.27e-52 196
Msa0560250 MtrunA17_Chr2g0332221 24.054 661 430 16 69 681 161 797 2.27e-44 172
Msa0560250 MtrunA17_Chr2g0318061 40.800 250 142 3 73 321 29 273 2.29e-52 185
Msa0560250 MtrunA17_Chr2g0332241 26.700 603 379 17 75 651 856 1421 2.42e-52 196
Msa0560250 MtrunA17_Chr2g0332241 23.976 659 434 14 69 681 161 798 8.68e-45 173
Msa0560250 MtrunA17_Chr2g0331081 28.649 555 357 14 75 610 891 1425 2.65e-52 196
Msa0560250 MtrunA17_Chr2g0331081 27.656 640 376 16 65 646 169 779 3.55e-51 192
Msa0560250 MtrunA17_Chr8g0340651 29.379 531 330 13 75 584 905 1411 4.03e-52 195
Msa0560250 MtrunA17_Chr8g0340651 25.262 669 420 15 69 689 172 808 3.33e-50 189
Msa0560250 MtrunA17_Chr8g0393191 41.897 253 140 4 70 320 64 311 7.59e-52 192
Msa0560250 MtrunA17_Chr8g0393191 27.333 300 186 8 379 655 523 813 1.59e-22 103
Msa0560250 MtrunA17_Chr4g0003971 28.239 602 372 20 75 652 825 1390 9.35e-52 194
Msa0560250 MtrunA17_Chr4g0003971 24.603 630 416 15 65 650 151 765 4.27e-41 162
Msa0560250 MtrunA17_Chr2g0332211 26.368 603 381 17 75 651 939 1504 1.36e-51 194
Msa0560250 MtrunA17_Chr2g0332211 23.810 630 413 14 69 652 242 850 5.65e-42 164
Msa0560250 MtrunA17_Chr3g0138261 26.607 560 373 12 75 618 870 1407 3.03e-51 192
Msa0560250 MtrunA17_Chr3g0138261 25.532 611 400 13 74 642 165 762 4.27e-43 168
Msa0560250 MtrunA17_Chr3g0104621 27.495 531 332 15 75 581 764 1265 3.77e-51 192
Msa0560250 MtrunA17_Chr3g0104621 26.570 621 402 14 65 646 46 651 4.49e-48 183
Msa0560250 MtrunA17_Chr7g0262241 27.500 520 330 14 75 573 880 1373 6.29e-51 192
Msa0560250 MtrunA17_Chr7g0262241 24.451 683 442 18 45 674 122 783 5.10e-43 167
Msa0560250 MtrunA17_Chr7g0262251 26.909 550 348 15 75 593 827 1353 7.67e-51 191
Msa0560250 MtrunA17_Chr7g0262251 26.240 625 414 13 62 657 162 768 5.31e-46 177
Msa0560250 MtrunA17_Chr7g0261951 27.434 565 359 16 75 618 879 1413 1.02e-50 191
Msa0560250 MtrunA17_Chr7g0261951 25.036 687 433 19 45 674 122 783 1.84e-43 169
Msa0560250 MtrunA17_Chr0c20g0493841 27.187 640 395 14 67 657 160 777 1.26e-50 191
Msa0560250 MtrunA17_Chr0c20g0493841 27.176 563 363 13 67 606 850 1388 6.13e-50 189
Msa0560250 MtrunA17_Chr1g0171351 26.996 526 349 11 75 584 894 1400 6.70e-50 189
Msa0560250 MtrunA17_Chr1g0171351 23.473 622 412 13 75 648 176 781 3.43e-39 155
Msa0560250 MtrunA17_Chr7g0262231 26.307 593 377 16 75 646 883 1436 6.43e-49 186
Msa0560250 MtrunA17_Chr7g0262231 23.971 680 449 16 45 674 122 783 3.13e-43 168
Msa0560250 MtrunA17_Chr1g0148841 25.451 554 371 12 75 610 877 1406 1.68e-48 184
Msa0560250 MtrunA17_Chr1g0148841 26.400 625 393 15 75 651 166 771 1.89e-44 172
Msa0560250 MtrunA17_Chr7g0265991 27.422 547 350 14 66 584 49 576 2.86e-48 180
Msa0560250 MtrunA17_Chr7g0262221 26.471 612 375 19 75 652 854 1424 6.46e-48 182
Msa0560250 MtrunA17_Chr7g0262221 26.460 548 362 14 45 559 123 662 4.98e-41 161
Msa0560250 MtrunA17_Chr7g0262261 25.556 630 416 13 62 650 120 737 2.67e-47 181
Msa0560250 MtrunA17_Chr7g0262261 26.238 606 393 16 75 652 803 1382 2.53e-46 178
Msa0560250 MtrunA17_Chr1g0198291 26.386 523 344 12 69 573 888 1387 7.38e-47 179
Msa0560250 MtrunA17_Chr1g0198291 24.394 619 414 14 75 650 189 796 3.36e-34 140
Msa0560250 MtrunA17_Chr1g0148811 26.058 591 390 14 75 650 854 1412 1.26e-46 179
Msa0560250 MtrunA17_Chr1g0148811 25.765 621 392 17 75 646 154 754 2.99e-35 144
Msa0560250 MtrunA17_Chr5g0429871 26.394 538 350 13 75 592 667 1178 4.20e-45 174
Msa0560250 MtrunA17_Chr5g0429871 26.415 583 353 17 115 646 18 575 3.02e-43 168
Msa0560250 MtrunA17_Chr5g0411621 38.372 258 149 6 67 320 41 292 6.76e-45 171
Msa0560250 MtrunA17_Chr5g0411621 28.767 292 195 6 367 655 442 723 2.00e-28 121
Msa0560250 MtrunA17_Chr4g0062871 26.340 653 392 15 69 660 144 768 9.21e-45 173
Msa0560250 MtrunA17_Chr4g0062871 26.186 527 352 12 75 584 844 1350 9.45e-43 167
Msa0560250 MtrunA17_Chr4g0069211 27.070 628 386 17 67 650 159 758 1.92e-44 171
Msa0560250 MtrunA17_Chr4g0069211 33.473 239 141 6 54 281 819 1050 4.47e-28 120
Msa0560250 MtrunA17_Chr7g0265971 26.740 546 339 12 75 584 875 1395 3.96e-44 171
Msa0560250 MtrunA17_Chr7g0265971 24.879 619 405 14 65 637 168 772 7.74e-44 170
Msa0560250 MtrunA17_Chr7g0265981 26.236 526 353 11 75 584 883 1389 5.23e-44 171
Msa0560250 MtrunA17_Chr7g0265981 24.684 632 416 14 65 650 174 791 5.49e-43 167
Msa0560250 MtrunA17_Chr7g0266001 25.159 628 414 15 65 648 53 668 9.40e-44 167
Msa0560250 MtrunA17_Chr7g0265961 25.682 623 389 18 75 650 182 777 1.35e-43 169
Msa0560250 MtrunA17_Chr7g0265961 24.665 523 343 12 66 573 821 1307 4.51e-36 146
Msa0560250 MtrunA17_Chr1g0199471 39.623 265 144 6 69 330 511 762 2.63e-42 165
Msa0560250 MtrunA17_Chr4g0004021 24.926 678 437 17 65 691 161 817 1.44e-41 163
Msa0560250 MtrunA17_Chr4g0004021 28.271 428 272 11 75 487 863 1270 2.18e-41 162
Msa0560250 MtrunA17_Chr7g0264441 40.244 246 140 6 69 311 273 514 1.90e-41 162
Msa0560250 MtrunA17_Chr7g0261981 24.736 663 429 20 35 642 111 758 5.43e-41 161
Msa0560250 MtrunA17_Chr7g0261981 24.664 596 377 19 75 652 861 1402 2.31e-40 159
Msa0560250 MtrunA17_Chr1g0180971 38.618 246 144 5 69 311 407 648 4.11e-39 154
Msa0560250 MtrunA17_Chr4g0026741 71.429 112 22 6 1 110 1 104 2.63e-37 135
Msa0560250 MtrunA17_Chr4g0028621 35.772 246 151 5 69 311 501 742 2.05e-34 140
Msa0560250 MtrunA17_Chr3g0093331 34.762 210 131 3 95 301 18 224 4.53e-32 125
Msa0560250 MtrunA17_Chr7g0262321 27.506 429 262 15 74 480 567 968 6.05e-31 130
Msa0560250 MtrunA17_Chr7g0262321 27.619 315 214 6 178 485 21 328 3.15e-23 105
Msa0560250 MtrunA17_Chr6g0472481 33.186 226 132 4 75 285 13 234 8.41e-30 119
Msa0560250 MtrunA17_Chr7g0249091 29.455 275 153 11 31 284 65 319 1.56e-18 87.8
Msa0560250 MtrunA17_Chr4g0050241 40.625 96 37 2 566 661 89 164 1.20e-17 81.6
Msa0560250 MtrunA17_Chr4g0050241 32.895 152 55 2 372 523 8 112 1.12e-15 75.9
Msa0560250 MtrunA17_Chr7g0227391 28.636 220 131 8 75 284 442 645 3.97e-15 79.3
Msa0560250 MtrunA17_Chr4g0039221 58.929 56 23 0 55 110 9 64 1.34e-14 69.3
Msa0560250 MtrunA17_Chr4g0061601 29.200 250 142 13 59 297 391 616 2.27e-14 76.6
Msa0560250 MtrunA17_Chr4g0041871 30.516 213 134 7 75 284 1023 1224 2.98e-14 77.0
Msa0560250 MtrunA17_Chr4g0041871 28.102 274 167 13 31 291 312 568 1.67e-13 74.3
Msa0560250 MtrunA17_Chr4g0050231 75.510 49 8 2 59 107 4 48 1.09e-13 66.2
Msa0560250 MtrunA17_Chr4g0047831 43.023 86 46 2 191 276 1 83 1.16e-13 67.4
Msa0560250 MtrunA17_Chr1g0194031 30.841 214 126 11 75 278 401 602 1.35e-13 74.7
Msa0560250 MtrunA17_Chr1g0193991 32.474 194 115 8 75 263 406 588 2.33e-13 73.9
Msa0560250 MtrunA17_Chr1g0178481 28.745 247 148 9 43 279 366 594 3.19e-13 73.2
Msa0560250 MtrunA17_Chr3g0132711 31.579 190 109 7 76 259 210 384 3.87e-13 72.8
Msa0560250 MtrunA17_Chr3g0123411 28.251 223 138 7 72 287 919 1126 4.93e-13 72.8
Msa0560250 MtrunA17_Chr6g0452171 30.396 227 132 8 72 288 1034 1244 5.69e-13 72.8
Msa0560250 MtrunA17_Chr6g0452171 33.333 183 106 9 86 263 389 560 1.65e-11 68.2
Msa0560250 MtrunA17_Chr4g0050191 63.636 55 18 2 54 108 40 92 5.84e-13 65.9
Msa0560250 MtrunA17_Chr7g0238421 32.653 147 87 4 85 229 14 150 8.06e-13 68.6
Msa0560250 MtrunA17_Chr7g0257321 48.148 54 25 1 55 108 3 53 8.45e-13 63.5
Msa0560250 MtrunA17_Chr5g0412741 28.311 219 134 9 75 284 473 677 8.74e-13 71.6
Msa0560250 MtrunA17_Chr6g0452041 31.156 199 119 5 72 263 1033 1220 9.43e-13 72.0
Msa0560250 MtrunA17_Chr6g0452041 33.333 183 106 9 86 263 389 560 5.53e-12 69.7
Msa0560250 MtrunA17_Chr6g0451881 31.156 199 119 5 72 263 1021 1208 1.35e-12 71.6
Msa0560250 MtrunA17_Chr6g0451881 32.787 183 107 9 86 263 389 560 2.48e-11 67.4
Msa0560250 MtrunA17_Chr4g0069221 22.414 348 236 8 276 606 3 333 1.46e-12 70.1
Msa0560250 MtrunA17_Chr4g0060401 28.141 199 122 8 68 259 621 805 1.52e-12 71.2
Msa0560250 MtrunA17_Chr2g0285191 28.750 240 145 9 36 263 372 597 1.65e-12 71.2
Msa0560250 MtrunA17_Chr3g0128381 29.258 229 140 9 74 291 406 623 1.72e-12 70.9
Msa0560250 MtrunA17_Chr6g0452141 31.683 202 118 10 86 278 390 580 2.22e-12 70.9
Msa0560250 MtrunA17_Chr6g0452141 32.828 198 117 7 72 263 1031 1218 6.62e-12 69.3
Msa0560250 MtrunA17_Chr6g0452081 33.333 183 106 9 86 263 51 222 2.32e-12 67.4
Msa0560250 MtrunA17_Chr6g0451911 28.980 245 152 10 86 321 389 620 2.86e-12 70.5
Msa0560250 MtrunA17_Chr3g0119381 33.333 201 110 11 72 263 413 598 3.85e-12 70.1
Msa0560250 MtrunA17_Chr7g0257341 31.053 190 110 7 47 230 546 720 3.94e-12 70.1
Msa0560250 MtrunA17_Chr7g0257341 23.506 251 164 7 14 257 1424 1653 2.09e-11 67.8
Msa0560250 MtrunA17_Chr6g0481921 28.899 218 137 8 75 287 288 492 5.78e-12 69.3
Msa0560250 MtrunA17_Chr6g0452111 33.880 183 105 9 86 263 396 567 5.82e-12 69.3
Msa0560250 MtrunA17_Chr6g0452111 29.911 224 137 6 72 288 1032 1242 1.37e-11 68.2
Msa0560250 MtrunA17_Chr3g0093041 30.168 179 104 6 87 259 207 370 9.15e-12 68.2
Msa0560250 MtrunA17_Chr6g0452071 30.151 199 121 5 72 263 227 414 1.30e-11 67.4
Msa0560250 MtrunA17_Chr1g0180601 33.668 199 106 11 75 263 416 598 1.42e-11 68.2
Msa0560250 MtrunA17_Chr7g0233901 30.222 225 128 11 72 284 1009 1216 1.76e-11 67.8
Msa0560250 MtrunA17_Chr7g0264631 33.166 199 107 11 75 263 443 625 1.82e-11 67.8
Msa0560250 MtrunA17_Chr4g0069351 32.487 197 111 9 75 263 395 577 2.29e-11 67.4
Msa0560250 MtrunA17_Chr4g0069411 28.283 198 119 7 75 263 1067 1250 2.35e-11 67.4
Msa0560250 MtrunA17_Chr2g0285301 28.866 194 122 6 75 263 381 563 2.38e-11 67.4
Msa0560250 MtrunA17_Chr6g0452061 29.018 224 139 6 72 288 543 753 3.30e-11 66.6
Msa0560250 MtrunA17_Chr4g0069361 31.019 216 123 10 75 278 395 596 3.57e-11 67.0
Msa0560250 MtrunA17_Chr6g0463181 28.899 218 130 10 70 285 619 813 3.81e-11 67.0
Msa0560250 MtrunA17_Chr3g0138211 31.500 200 115 9 72 263 410 595 4.62e-11 66.6
Msa0560250 MtrunA17_Chr6g0486841 28.571 196 120 7 75 263 1019 1201 5.33e-11 66.2
Msa0560250 MtrunA17_Chr6g0453051 29.596 223 133 11 48 263 357 562 7.20e-11 65.9
Msa0560250 MtrunA17_Chr6g0463141 28.512 242 129 12 68 285 630 851 8.47e-11 65.9
Msa0560250 MtrunA17_Chr2g0285311 29.381 194 121 7 75 263 386 568 8.65e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0560250 AT1G17840.1 52.765 633 276 8 42 660 35 658 0.0 628
Msa0560250 AT3G21090.1 47.717 635 310 8 41 660 10 637 0.0 606
Msa0560250 AT1G51500.1 46.395 638 314 10 42 660 10 638 0.0 561
Msa0560250 AT1G51460.1 41.846 650 346 4 55 682 10 649 0.0 535
Msa0560250 AT2G28070.2 37.134 614 364 8 49 652 108 709 1.01e-132 409
Msa0560250 AT2G28070.1 37.134 614 364 8 49 652 108 709 1.01e-132 409
Msa0560250 AT2G13610.1 30.653 597 382 11 70 651 57 636 4.06e-84 279
Msa0560250 AT3G55130.1 30.699 544 353 7 69 594 93 630 1.05e-80 271
Msa0560250 AT3G55110.1 30.684 541 340 8 73 594 89 613 9.10e-78 263
Msa0560250 AT1G53270.1 30.769 585 349 14 72 650 47 581 1.10e-77 260
Msa0560250 AT3G55100.1 31.086 534 341 10 73 594 49 567 5.77e-76 257
Msa0560250 AT3G55100.2 31.086 534 341 10 73 594 49 567 5.77e-76 257
Msa0560250 AT2G01320.8 30.514 603 360 14 45 615 47 622 6.42e-76 257
Msa0560250 AT2G01320.5 30.514 603 360 14 45 615 47 622 6.42e-76 257
Msa0560250 AT2G01320.1 30.313 607 364 14 45 619 47 626 1.92e-75 257
Msa0560250 AT2G01320.4 30.313 607 364 14 45 619 47 626 1.92e-75 257
Msa0560250 AT2G37360.1 30.094 638 378 14 73 657 131 753 2.64e-75 258
Msa0560250 AT2G01320.2 30.313 607 364 14 45 619 47 626 3.13e-75 257
Msa0560250 AT2G01320.3 30.313 607 364 14 45 619 47 626 4.30e-75 256
Msa0560250 AT3G55090.1 28.549 641 391 12 73 657 105 734 8.41e-74 253
Msa0560250 AT5G19410.1 28.374 578 374 12 75 645 66 610 2.27e-73 249
Msa0560250 AT5G19410.2 28.374 578 374 12 75 645 75 619 2.61e-73 249
Msa0560250 AT5G13580.1 30.088 565 355 9 72 618 105 647 5.26e-72 248
Msa0560250 AT4G25750.1 30.494 587 352 14 75 651 30 570 2.54e-71 243
Msa0560250 AT5G06530.2 32.545 550 327 18 72 594 176 708 1.14e-70 245
Msa0560250 AT5G06530.1 32.545 550 327 18 72 594 176 708 1.14e-70 245
Msa0560250 AT3G53510.1 32.468 539 340 9 73 601 124 648 1.83e-70 244
Msa0560250 AT5G06530.3 33.074 514 308 15 72 560 176 678 4.07e-69 239
Msa0560250 AT2G39350.1 28.284 647 387 14 73 657 107 738 4.70e-69 240
Msa0560250 AT1G31770.1 29.949 591 372 17 69 645 75 637 6.45e-67 232
Msa0560250 AT5G52860.1 28.450 587 362 13 75 651 44 582 9.56e-67 231
Msa0560250 AT2G01320.7 32.238 487 276 12 45 499 47 511 1.02e-65 226
Msa0560250 AT2G01320.6 32.238 487 276 12 45 499 47 511 1.02e-65 226
Msa0560250 AT1G71960.1 30.769 611 363 20 72 652 80 660 1.45e-65 229
Msa0560250 AT4G27420.1 30.592 608 376 16 67 657 58 636 2.03e-65 228
Msa0560250 AT3G13220.1 32.240 549 325 17 70 595 101 625 9.15e-64 224
Msa0560250 AT5G06530.4 32.114 492 302 13 92 560 1 483 2.30e-63 219
Msa0560250 AT3G25620.2 29.500 600 378 19 72 651 96 670 6.14e-61 216
Msa0560250 AT2G29940.1 27.903 534 339 12 75 588 853 1360 8.36e-57 210
Msa0560250 AT2G29940.1 26.754 613 391 15 74 642 174 772 3.64e-50 190
Msa0560250 AT3G16340.1 27.757 526 345 11 75 584 841 1347 3.24e-55 205
Msa0560250 AT3G16340.1 26.442 624 395 17 69 645 156 762 8.45e-47 179
Msa0560250 AT3G16340.2 27.757 526 345 11 75 584 836 1342 3.85e-55 205
Msa0560250 AT3G16340.2 26.560 625 388 19 69 645 156 757 1.77e-45 176
Msa0560250 AT3G53480.1 27.460 630 370 18 74 646 188 787 5.17e-55 204
Msa0560250 AT3G53480.1 26.461 616 401 14 7 593 797 1389 4.32e-51 192
Msa0560250 AT4G15230.2 26.101 636 397 16 65 650 146 758 1.72e-54 202
Msa0560250 AT4G15230.2 26.276 529 344 15 65 570 817 1322 1.42e-45 176
Msa0560250 AT4G15230.3 26.101 636 397 16 65 650 146 758 2.24e-54 202
Msa0560250 AT4G15230.3 26.325 547 361 14 65 593 817 1339 3.50e-49 187
Msa0560250 AT4G15230.1 26.101 636 397 16 65 650 146 758 2.24e-54 202
Msa0560250 AT4G15230.1 26.325 547 361 14 65 593 817 1339 3.50e-49 187
Msa0560250 AT4G15230.4 26.101 636 397 16 65 650 67 679 4.36e-54 201
Msa0560250 AT4G15230.4 26.325 547 361 14 65 593 738 1260 5.06e-49 186
Msa0560250 AT4G15233.7 26.452 620 402 17 74 660 154 752 5.50e-54 201
Msa0560250 AT4G15233.7 26.306 555 372 16 54 593 781 1313 2.04e-47 181
Msa0560250 AT4G15233.5 26.911 628 405 18 74 670 92 696 7.52e-54 201
Msa0560250 AT4G15233.5 26.128 532 359 14 76 593 677 1188 3.37e-45 174
Msa0560250 AT4G15233.4 26.911 628 405 18 74 670 92 696 7.52e-54 201
Msa0560250 AT4G15233.4 26.128 532 359 14 76 593 677 1188 3.37e-45 174
Msa0560250 AT1G59870.1 28.113 530 340 12 75 585 894 1401 1.89e-53 200
Msa0560250 AT1G59870.1 28.140 629 389 17 65 646 176 788 2.81e-51 193
Msa0560250 AT1G15210.1 28.044 542 350 13 75 599 867 1385 2.14e-53 199
Msa0560250 AT1G15210.1 26.677 626 401 15 65 646 174 785 2.69e-46 178
Msa0560250 AT1G15520.1 26.789 601 378 15 75 652 852 1413 2.16e-53 199
Msa0560250 AT1G15520.1 25.806 682 432 20 22 646 105 769 2.18e-47 181
Msa0560250 AT2G37280.2 26.882 651 384 18 71 660 150 769 3.50e-53 199
Msa0560250 AT2G37280.2 28.166 529 336 13 59 569 823 1325 1.97e-51 194
Msa0560250 AT2G37280.1 26.882 651 384 18 71 660 150 769 4.44e-53 199
Msa0560250 AT2G37280.1 27.486 553 360 13 59 593 823 1352 4.96e-53 198
Msa0560250 AT2G37280.4 27.486 553 360 13 59 593 665 1194 5.03e-53 198
Msa0560250 AT2G37280.4 26.457 635 375 18 87 660 8 611 6.50e-49 186
Msa0560250 AT2G37280.3 27.486 553 360 13 59 593 852 1381 5.88e-53 198
Msa0560250 AT2G37280.3 25.698 681 385 19 70 660 149 798 4.90e-48 183
Msa0560250 AT4G15233.3 25.705 638 402 17 74 660 92 708 5.97e-53 198
Msa0560250 AT4G15233.3 26.306 555 372 16 54 593 737 1269 1.82e-47 181
Msa0560250 AT4G15233.6 25.705 638 402 17 74 660 92 708 5.97e-53 198
Msa0560250 AT4G15233.6 26.306 555 372 16 54 593 737 1269 1.82e-47 181
Msa0560250 AT4G15233.2 25.705 638 402 17 74 660 154 770 6.20e-53 198
Msa0560250 AT4G15233.2 26.742 531 349 16 54 569 799 1304 5.83e-45 174
Msa0560250 AT4G15233.1 25.705 638 402 17 74 660 154 770 7.02e-53 198
Msa0560250 AT4G15233.1 26.306 555 372 16 54 593 799 1331 2.96e-47 181
Msa0560250 AT4G15236.1 25.822 639 400 18 74 660 152 768 8.92e-52 194
Msa0560250 AT4G15236.1 25.564 532 364 12 75 593 817 1329 4.62e-47 180
Msa0560250 AT4G15215.9 26.108 632 394 17 65 646 140 748 3.11e-51 193
Msa0560250 AT4G15215.9 25.641 546 366 12 65 593 811 1333 2.15e-48 184
Msa0560250 AT4G15215.4 26.108 632 394 17 65 646 140 748 3.11e-51 193
Msa0560250 AT4G15215.4 25.641 546 366 12 65 593 811 1333 2.15e-48 184
Msa0560250 AT4G15215.5 26.108 632 394 17 65 646 140 748 3.11e-51 193
Msa0560250 AT4G15215.5 25.641 546 366 12 65 593 811 1333 2.15e-48 184
Msa0560250 AT4G15215.3 26.108 632 394 17 65 646 140 748 3.11e-51 193
Msa0560250 AT4G15215.3 25.641 546 366 12 65 593 811 1333 2.15e-48 184
Msa0560250 AT4G15215.2 26.108 632 394 17 65 646 140 748 3.11e-51 193
Msa0560250 AT4G15215.2 25.641 546 366 12 65 593 811 1333 2.15e-48 184
Msa0560250 AT4G15215.11 26.108 632 394 17 65 646 143 751 3.74e-51 192
Msa0560250 AT4G15215.11 25.641 546 366 12 65 593 814 1336 2.29e-48 184
Msa0560250 AT4G15215.8 26.424 632 385 18 65 646 140 741 4.00e-51 192
Msa0560250 AT4G15215.8 25.641 546 366 12 65 593 804 1326 2.20e-48 184
Msa0560250 AT4G15215.10 26.424 632 385 18 65 646 140 741 4.00e-51 192
Msa0560250 AT4G15215.10 25.641 546 366 12 65 593 804 1326 2.20e-48 184
Msa0560250 AT4G15215.6 26.424 632 385 18 65 646 140 741 4.00e-51 192
Msa0560250 AT4G15215.6 25.641 546 366 12 65 593 804 1326 2.20e-48 184
Msa0560250 AT4G15215.7 26.424 632 385 18 65 646 140 741 4.00e-51 192
Msa0560250 AT4G15215.7 25.641 546 366 12 65 593 804 1326 2.20e-48 184
Msa0560250 AT4G15215.1 26.424 632 385 18 65 646 143 744 4.48e-51 192
Msa0560250 AT4G15215.1 25.641 546 366 12 65 593 807 1329 2.28e-48 184
Msa0560250 AT3G25620.1 34.435 363 215 11 72 420 96 449 8.00e-51 184
Msa0560250 AT4G15233.8 25.549 638 394 18 74 660 154 761 9.14e-49 186
Msa0560250 AT4G15233.8 26.306 555 372 16 54 593 790 1322 3.63e-47 181
Msa0560250 AT3G30842.1 28.731 536 331 17 75 589 848 1353 9.51e-48 182
Msa0560250 AT3G30842.1 25.865 549 356 12 74 578 160 701 1.22e-43 170
Msa0560250 AT1G15520.2 25.806 682 432 20 22 646 105 769 2.51e-47 181
Msa0560250 AT1G15520.2 29.009 424 263 10 75 481 852 1254 4.84e-41 162
Msa0560250 AT2G26910.1 25.996 527 353 12 75 584 845 1351 2.10e-46 178
Msa0560250 AT2G26910.1 25.990 631 401 14 68 650 143 755 4.61e-45 174
Msa0560250 AT2G36380.1 25.440 625 412 12 69 650 182 795 2.39e-45 175
Msa0560250 AT2G36380.1 25.508 541 357 15 66 584 869 1385 3.25e-40 159
Msa0560250 AT1G66950.1 25.600 625 411 13 69 650 184 797 1.47e-44 172
Msa0560250 AT1G66950.1 26.335 543 350 16 66 584 870 1386 4.40e-43 168
Msa0560250 AT1G53390.1 38.403 263 151 6 55 314 507 761 9.17e-43 167
Msa0560250 AT2G37010.2 30.110 455 270 13 69 488 494 935 1.37e-41 163
Msa0560250 AT2G37010.1 30.110 455 270 13 69 488 494 935 1.37e-41 163
Msa0560250 AT5G60740.1 36.179 246 150 6 69 311 509 750 2.89e-33 137
Msa0560250 AT5G61700.2 27.715 267 158 11 18 264 548 799 2.13e-15 80.9
Msa0560250 AT5G61700.4 27.715 267 158 11 18 264 548 799 2.13e-15 80.9
Msa0560250 AT1G65410.1 30.638 235 131 8 71 284 95 318 3.48e-15 78.2
Msa0560250 AT5G61700.1 26.923 234 141 9 25 240 557 778 4.85e-14 76.6
Msa0560250 AT1G70610.2 27.755 245 155 9 74 311 290 519 8.26e-14 75.1
Msa0560250 AT5G39040.1 29.661 236 130 10 75 297 413 625 9.13e-14 75.1
Msa0560250 AT1G70610.1 27.755 245 155 9 74 311 471 700 1.36e-13 74.7
Msa0560250 AT3G21080.1 32.168 143 86 3 521 658 103 239 1.42e-13 71.6
Msa0560250 AT1G27940.1 30.412 194 119 6 75 263 388 570 1.50e-13 75.1
Msa0560250 AT1G27940.1 28.571 217 133 6 75 284 1021 1222 2.05e-12 71.2
Msa0560250 AT1G27940.2 30.412 194 119 6 75 263 174 356 1.84e-13 74.7
Msa0560250 AT1G27940.2 28.571 217 133 6 75 284 807 1008 1.74e-12 71.6
Msa0560250 AT4G33460.1 29.224 219 134 6 75 292 59 257 1.90e-13 71.6
Msa0560250 AT3G47780.1 27.869 183 112 7 68 240 624 796 3.21e-13 73.9
Msa0560250 AT3G47750.1 29.240 171 108 6 68 233 626 788 7.14e-13 72.8
Msa0560250 AT1G28010.1 30.412 194 119 7 75 263 389 571 8.65e-13 72.4
Msa0560250 AT1G28010.1 29.630 216 134 7 74 284 1022 1224 9.60e-11 65.9
Msa0560250 AT5G61740.3 26.667 255 153 11 15 259 413 643 9.40e-13 72.0
Msa0560250 AT3G47760.3 23.789 227 155 6 15 233 571 787 1.17e-12 72.0
Msa0560250 AT3G28390.1 30.317 221 134 6 75 288 997 1204 1.18e-12 72.0
Msa0560250 AT3G28390.1 31.373 204 122 10 86 284 375 565 2.64e-12 70.9
Msa0560250 AT5G61740.2 26.667 255 153 11 15 259 518 748 1.45e-12 71.6
Msa0560250 AT2G41700.2 30.928 194 105 7 47 230 471 645 1.49e-12 72.0
Msa0560250 AT5G61740.1 27.237 257 149 11 15 259 552 782 1.67e-12 71.6
Msa0560250 AT2G41700.1 30.928 194 105 7 47 230 541 715 1.95e-12 71.6
Msa0560250 AT3G47730.1 30.729 192 108 7 76 259 547 721 2.11e-12 71.2
Msa0560250 AT5G61690.2 30.000 190 112 6 76 259 548 722 2.21e-12 71.2
Msa0560250 AT3G28380.1 32.020 203 118 10 85 278 386 577 2.76e-12 70.9
Msa0560250 AT3G47790.3 25.316 237 146 9 18 240 550 769 3.11e-12 70.5
Msa0560250 AT2G47000.4 29.500 200 119 9 72 263 398 583 3.73e-12 70.5
Msa0560250 AT3G47760.1 26.036 169 110 5 70 233 589 747 3.73e-12 70.5
Msa0560250 AT3G47790.2 28.723 188 116 7 62 240 472 650 3.82e-12 70.1
Msa0560250 AT2G47000.3 29.500 200 119 9 72 263 398 583 3.91e-12 70.5
Msa0560250 AT2G47000.7 29.500 200 119 9 72 263 398 583 3.91e-12 70.5
Msa0560250 AT3G62150.3 28.821 229 138 10 49 263 385 602 4.11e-12 70.5
Msa0560250 AT3G62150.2 28.821 229 138 10 49 263 385 602 4.11e-12 70.5
Msa0560250 AT3G62150.1 28.821 229 138 10 49 263 385 602 4.11e-12 70.5
Msa0560250 AT2G47000.6 29.500 200 119 9 72 263 398 583 4.58e-12 70.1
Msa0560250 AT2G47000.5 29.500 200 119 9 72 263 398 583 4.58e-12 70.1
Msa0560250 AT2G47000.1 29.500 200 119 9 72 263 398 583 4.58e-12 70.1
Msa0560250 AT2G47000.2 29.500 200 119 9 72 263 398 583 4.74e-12 70.1
Msa0560250 AT3G47760.2 26.901 171 106 5 70 233 599 757 4.97e-12 70.1
Msa0560250 AT3G47790.1 28.723 188 116 7 62 240 591 769 5.22e-12 69.7
Msa0560250 AT1G02530.2 29.442 197 123 7 72 263 382 567 5.87e-12 69.7
Msa0560250 AT3G28415.1 32.843 204 119 10 86 284 366 556 6.09e-12 69.7
Msa0560250 AT3G28415.1 28.959 221 137 6 75 288 993 1200 1.84e-11 68.2
Msa0560250 AT3G28415.2 32.843 204 119 10 86 284 374 564 6.76e-12 69.7
Msa0560250 AT3G28415.2 28.959 221 137 6 75 288 1001 1208 1.89e-11 68.2
Msa0560250 AT1G02530.1 29.442 197 123 7 72 263 382 567 8.32e-12 69.3
Msa0560250 AT3G47770.1 23.605 233 151 7 17 240 553 767 8.51e-12 69.3
Msa0560250 AT3G47770.2 23.605 233 151 7 17 240 579 793 1.12e-11 68.9
Msa0560250 AT1G10680.2 29.114 237 139 12 39 263 341 560 1.20e-11 68.9
Msa0560250 AT1G10680.1 29.114 237 139 12 39 263 341 560 1.25e-11 68.9
Msa0560250 AT5G61730.2 30.890 191 109 7 76 259 549 723 1.84e-11 68.2
Msa0560250 AT1G02520.1 29.949 197 122 8 72 263 395 580 1.84e-11 68.2
Msa0560250 AT1G02520.2 29.949 197 122 8 72 263 395 580 1.84e-11 68.2
Msa0560250 AT1G02520.3 29.949 197 122 8 72 263 395 580 1.84e-11 68.2
Msa0560250 AT5G61730.1 30.890 191 109 7 76 259 539 713 1.89e-11 68.2
Msa0560250 AT3G28345.1 32.787 183 107 8 86 263 387 558 2.04e-11 68.2
Msa0560250 AT4G18050.1 29.358 218 124 11 75 278 372 573 2.66e-11 67.8
Msa0560250 AT4G18050.2 29.358 218 124 11 75 278 382 583 2.83e-11 67.8
Msa0560250 AT4G28620.1 29.744 195 123 6 73 263 452 636 3.27e-11 67.0
Msa0560250 AT3G47740.1 24.658 219 143 8 68 279 621 824 3.71e-11 67.0
Msa0560250 AT4G25960.1 29.808 208 120 11 86 284 429 619 3.77e-11 67.4
Msa0560250 AT3G28360.1 30.045 223 130 9 72 284 995 1201 4.10e-11 67.0
Msa0560250 AT5G61690.1 29.534 193 108 7 76 259 548 721 6.64e-11 66.2
Msa0560250 AT5G46540.1 30.928 194 118 8 75 263 374 556 9.28e-11 65.9

Find 142 sgRNAs with CRISPR-Local

Find 474 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAATTCCTAAGCCATTT+TGG 0.154736 4_1:+59496243 Msa0560250:CDS
TCCCTGTGTCTTCCATCTTC+TGG 0.209606 4_1:+59487751 Msa0560250:CDS
ATGATTCCCATTAGATAGTT+AGG 0.232166 4_1:-59496161 None:intergenic
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4_1:+59493743 Msa0560250:CDS
AATTCAAGGAATCATGATTT+TGG 0.235957 4_1:+59496196 Msa0560250:CDS
GCTTAACATGGAAGGATATA+TGG 0.238537 4_1:+59487905 Msa0560250:CDS
GATAATAATGGTCCAATAAT+AGG 0.260699 4_1:-59496524 None:intergenic
AGGCACTGTTTACTATGATT+TGG 0.260865 4_1:+59495107 Msa0560250:CDS
TTTCAACGAGAAAGACAAAA+TGG 0.284665 4_1:+59495933 Msa0560250:CDS
GTAACATGAGTTACTCAAAA+TGG 0.286976 4_1:+59496417 Msa0560250:CDS
AACCGTTAAGGTTGTCAATA+AGG 0.290717 4_1:-59493597 None:intergenic
TTCGCGATCTAGGCTATTAC+TGG 0.297240 4_1:+59495046 Msa0560250:CDS
AACCTCTGTCTTCTGTCTTC+AGG 0.305705 4_1:+59493983 Msa0560250:CDS
TGGTCAACTCTTGGCTATAA+TGG 0.305777 4_1:+59487999 Msa0560250:CDS
TCAATTCTTCAAGGACTATC+AGG 0.308722 4_1:+59487964 Msa0560250:CDS
CATTGTCCCTAACTATCTAA+TGG 0.316885 4_1:+59496154 Msa0560250:CDS
GTTGCATTGGCTATTAGTTT+AGG 0.318828 4_1:+59495087 Msa0560250:CDS
CACAACATGTATTGTTGTAT+TGG 0.322784 4_1:-59496564 None:intergenic
GGCACTGTTTACTATGATTT+GGG 0.324130 4_1:+59495108 Msa0560250:CDS
CACAAACAAGAACTGTCTTA+TGG 0.325241 4_1:+59493457 Msa0560250:CDS
TAAGAACTGAGCATTGATTA+AGG 0.327862 4_1:-59494999 None:intergenic
TGAGTTTACAATTAAAGAAA+TGG 0.328561 4_1:+59493694 Msa0560250:CDS
GAGAAGGTGAAGCCTATTAT+TGG 0.334468 4_1:+59496512 Msa0560250:CDS
AGTAGCAGTACTATCTAATA+AGG 0.339503 4_1:+59494821 Msa0560250:CDS
ACAACATGTATTGTTGTATT+GGG 0.342848 4_1:-59496563 None:intergenic
GAAAGACAAAATGGGCATTA+TGG 0.350224 4_1:+59495942 Msa0560250:CDS
GTGAACATGTTTCGCGATCT+AGG 0.351864 4_1:+59495036 Msa0560250:CDS
TACCTTATTGACAACCTTAA+CGG 0.359542 4_1:+59493595 Msa0560250:CDS
AGCTCAAACACAAGACAAAC+AGG 0.360058 4_1:+59493415 Msa0560250:CDS
CACAAGTTATGACTCAATTA+AGG 0.360994 4_1:+59495131 Msa0560250:CDS
TATCTAATGGGAATCATAAC+TGG 0.369860 4_1:+59496167 Msa0560250:CDS
TATGTAGCATTTCATACATA+TGG 0.370483 4_1:+59496281 Msa0560250:CDS
CAATGTCTTGAACAGTTCTA+TGG 0.372401 4_1:-59487810 None:intergenic
GATGCAATCAACACAAGAAT+TGG 0.372547 4_1:+59493725 Msa0560250:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4_1:+59493752 Msa0560250:CDS
TTGGCTATAATGGGTCCTTC+TGG 0.378411 4_1:+59488009 Msa0560250:CDS
TGGTGGATTTCCTTCCTTTG+TGG 0.387528 4_1:+59495306 Msa0560250:CDS
ATAACTGGTGCTGGAATTCA+AGG 0.393286 4_1:+59496182 Msa0560250:CDS
TAAGACTTTCCACCAACATT+AGG 0.397401 4_1:-59496115 None:intergenic
TGGAGTGGATATCTCCAAAA+TGG 0.401571 4_1:-59496257 None:intergenic
ACAATTTCAAATGGAAAGAA+TGG 0.403948 4_1:+59487934 Msa0560250:CDS
ATTACCTGACACAATGTCTA+AGG 0.408071 4_1:+59493652 Msa0560250:CDS
GGTCAACTCTTGGCTATAAT+GGG 0.411078 4_1:+59488000 Msa0560250:CDS
TTTCATACATATGGATTTGA+AGG 0.415235 4_1:+59496290 Msa0560250:CDS
CATTTCTAATGTGGTTGTGC+TGG 0.418024 4_1:-59487836 None:intergenic
ATTGTCCCTAACTATCTAAT+GGG 0.420610 4_1:+59496155 Msa0560250:CDS
GAAGCCTGATGCTACTCCTT+TGG 0.423167 4_1:+59496589 Msa0560250:CDS
CACTGCTTCTCTAACCGTTA+AGG 0.423173 4_1:-59493609 None:intergenic
TCACTTCTTTCATTTATAGC+TGG 0.426693 4_1:+59495262 Msa0560250:CDS
TTCTTAACTTTCATGAGCAT+TGG 0.431247 4_1:+59495286 Msa0560250:CDS
AAAGAAGTCTTGGACGTGTT+AGG 0.439769 4_1:-59493811 None:intergenic
CTTCATCATCATTTCTAATG+TGG 0.439945 4_1:-59487845 None:intergenic
ATGGGAATCATAACTGGTGC+TGG 0.440680 4_1:+59496173 Msa0560250:CDS
ACTGACATGCAAGATAATAA+TGG 0.445923 4_1:-59496536 None:intergenic
GAAGATGAAGCTGAAGTTGA+TGG 0.447573 4_1:+59487877 Msa0560250:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.449080 4_1:-59493946 None:intergenic
ATACAAATTGCTTCTTCAGT+AGG 0.450049 4_1:-59494747 None:intergenic
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4_1:+59493753 Msa0560250:CDS
TGGGTAAATACAATTTCAAA+TGG 0.451256 4_1:+59487925 Msa0560250:CDS
TTCCTTTGTGGAAGACATGA+AGG 0.453367 4_1:+59495318 Msa0560250:CDS
TCAGGTAGAACAGTTTACTT+TGG 0.457155 4_1:+59494001 Msa0560250:CDS
GGAAACAAATCAATTCTTCA+AGG 0.458938 4_1:+59487955 Msa0560250:CDS
TAACATGAGTTACTCAAAAT+GGG 0.459756 4_1:+59496418 Msa0560250:CDS
TGATTCCCATTAGATAGTTA+GGG 0.462375 4_1:-59496160 None:intergenic
TCTTCCTTAGACATTGTGTC+AGG 0.464217 4_1:-59493656 None:intergenic
TTAACTTTCATGAGCATTGG+TGG 0.466607 4_1:+59495289 Msa0560250:CDS
TGAGACAGGATTGGCAGGGA+TGG 0.468207 4_1:+59494716 Msa0560250:CDS
GGATATCTCCAAAATGGCTT+AGG 0.470999 4_1:-59496251 None:intergenic
GGTGTGATTGCATATGTGAT+TGG 0.471213 4_1:+59495963 Msa0560250:CDS
GATATTGAGACAGGATTGGC+AGG 0.472353 4_1:+59494711 Msa0560250:CDS
ATTGAAACCAATAAAATGAA+TGG 0.474947 4_1:-59496005 None:intergenic
AATGATGATGAAGAGAGAAA+AGG 0.474955 4_1:+59487855 Msa0560250:CDS
TGCTAAGCCTGGTCAACTCT+TGG 0.475247 4_1:+59487990 Msa0560250:CDS
GCTACTTTAGATCATAAAGA+TGG 0.475396 4_1:+59493896 Msa0560250:CDS
GGGTAATAAGTTATAGCTGC+TGG 0.477417 4_1:-59496032 None:intergenic
CTTAACATGGAAGGATATAT+GGG 0.478975 4_1:+59487906 Msa0560250:CDS
TTATTTCAGGATATTGAGAC+AGG 0.481302 4_1:+59494702 Msa0560250:intron
TACAAATTGCTTCTTCAGTA+GGG 0.483181 4_1:-59494746 None:intergenic
ATTTCACAACAACCAGAAGA+TGG 0.485479 4_1:-59487763 None:intergenic
GAGTTTACAATTAAAGAAAT+GGG 0.487650 4_1:+59493695 Msa0560250:CDS
ACACTACTTGATACATTAGC+AGG 0.495844 4_1:+59488045 Msa0560250:CDS
ATAATGGGTCCTTCTGGCTG+TGG 0.503205 4_1:+59488015 Msa0560250:CDS
CTTAGTCATATATGTTGCAT+TGG 0.506957 4_1:+59495074 Msa0560250:CDS
TATAAACAAGGACTTTGATC+AGG 0.510437 4_1:+59494566 Msa0560250:CDS
AGTTCTTATCGAACGGTCAT+CGG 0.510858 4_1:+59495014 Msa0560250:CDS
AACACAAGAATTGGAGGGTG+GGG 0.512629 4_1:+59493734 Msa0560250:CDS
ACCTCACAAGCAGTGGAAGC+AGG 0.514557 4_1:-59494025 None:intergenic
CCATCCAAAGGAGTAGCATC+AGG 0.516635 4_1:-59496593 None:intergenic
CACAAGAAGAAAGGACATGC+TGG 0.521206 4_1:+59494973 Msa0560250:CDS
ACAGGGGAAATTCTGATCAA+TGG 0.521767 4_1:+59493433 Msa0560250:CDS
TCAAATCCTTTCTGTAGACC+AGG 0.524807 4_1:-59496056 None:intergenic
TCAATGGATCACAAGAAGAA+AGG 0.527070 4_1:+59494964 Msa0560250:CDS
ACCTGCTTCCACTGCTTGTG+AGG 0.532303 4_1:+59494024 Msa0560250:CDS
TCAGGATATTGAGACAGGAT+TGG 0.532907 4_1:+59494707 Msa0560250:intron
GAGACAGGATTGGCAGGGAT+GGG 0.533460 4_1:+59494717 Msa0560250:CDS
GTGTGATTGCATATGTGATT+GGG 0.540364 4_1:+59495964 Msa0560250:CDS
TATTATCAAAATTACAGAGA+AGG 0.544008 4_1:+59496496 Msa0560250:CDS
CAATACAACAATACATGTTG+TGG 0.546535 4_1:+59496565 Msa0560250:CDS
TTCAACGAGAAAGACAAAAT+GGG 0.552666 4_1:+59495934 Msa0560250:CDS
GCACTATCAAGTCCACTAGT+TGG 0.553890 4_1:-59493845 None:intergenic
CTATCAGGTTATGCTAAGCC+TGG 0.554504 4_1:+59487979 Msa0560250:CDS
CCTGATGCTACTCCTTTGGA+TGG 0.557576 4_1:+59496593 Msa0560250:CDS
TTCATGTCTTCCACAAAGGA+AGG 0.560013 4_1:-59495316 None:intergenic
GCAATCAACACAAGAATTGG+AGG 0.560697 4_1:+59493728 Msa0560250:CDS
CAACACAAGAATTGGAGGGT+GGG 0.564826 4_1:+59493733 Msa0560250:CDS
TAGTTACATCACTGGTGAAG+AGG 0.565625 4_1:+59496373 Msa0560250:CDS
TTTCTTGATGAACCAACTAG+TGG 0.565982 4_1:+59493833 Msa0560250:CDS
TGTTCATTATTTCAGGATCG+AGG 0.571276 4_1:+59495238 Msa0560250:intron
ATGTATGAAATGCTACATAG+TGG 0.574163 4_1:-59496277 None:intergenic
ATTATAGCCAAGAGTTGACC+AGG 0.574654 4_1:-59487997 None:intergenic
TTCAGTACTAGGTTGATGGA+TGG 0.578161 4_1:-59493942 None:intergenic
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4_1:+59493754 Msa0560250:CDS
AGAACTGTCTTATGGAACTT+CGG 0.585206 4_1:+59493465 Msa0560250:CDS
GGCACAAATAGTTACATCAC+TGG 0.591847 4_1:+59496365 Msa0560250:CDS
CAAATCCTTTCTGTAGACCA+GGG 0.595441 4_1:-59496055 None:intergenic
GTTCCTAACCTCACAAGCAG+TGG 0.604347 4_1:-59494032 None:intergenic
TACCTTCATGTCTTCCACAA+AGG 0.612393 4_1:-59495320 None:intergenic
TGGTACAAGCTTAACATGGA+AGG 0.615714 4_1:+59487897 Msa0560250:CDS
AATGCTCAGTTCTTATCGAA+CGG 0.619024 4_1:+59495007 Msa0560250:CDS
AACCAGAAGATGGAAGACAC+AGG 0.620472 4_1:-59487753 None:intergenic
TTGATGGTACAAGCTTAACA+TGG 0.625041 4_1:+59487893 Msa0560250:CDS
TAGAACTGTTCAAGACATTG+AGG 0.627102 4_1:+59487813 Msa0560250:CDS
TTTACTTAAAACTATAAACA+AGG 0.627463 4_1:+59494554 Msa0560250:CDS
TAGGCTAGAAAATAAAACAC+TGG 0.627569 4_1:-59496096 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4_1:+59493732 Msa0560250:CDS
ACCAGAAGATGGAAGACACA+GGG 0.643540 4_1:-59487752 None:intergenic
GGAAGACACAGGGAAGCCAT+CGG 0.648197 4_1:-59487742 None:intergenic
AAATCCTTTCTGTAGACCAG+GGG 0.648362 4_1:-59496054 None:intergenic
GTAGACTTGCCACAGCCAGA+AGG 0.652254 4_1:-59488024 None:intergenic
TATACAACATGTCCATCCAA+AGG 0.652562 4_1:-59496605 None:intergenic
ATCATAAAGATGGAATTCAG+AGG 0.657276 4_1:+59493906 Msa0560250:CDS
CTCAAACACAAGACAAACAG+GGG 0.662303 4_1:+59493417 Msa0560250:CDS
CAATCAACACAAGAATTGGA+GGG 0.667741 4_1:+59493729 Msa0560250:CDS
AATCCTTTCTGTAGACCAGG+GGG 0.676056 4_1:-59496053 None:intergenic
TGAAATGCTACATAGTGGAG+TGG 0.680423 4_1:-59496272 None:intergenic
GCTCAAACACAAGACAAACA+GGG 0.683103 4_1:+59493416 Msa0560250:CDS
ATATTGAGACAGGATTGGCA+GGG 0.685978 4_1:+59494712 Msa0560250:CDS
AATGGCTTAGGAATTTCATG+TGG 0.696679 4_1:-59496239 None:intergenic
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4_1:+59493755 Msa0560250:CDS
TTGTTCAAGAATGAGTACGA+AGG 0.728000 4_1:+59496314 Msa0560250:CDS
ATCCTTTCTGTAGACCAGGG+GGG 0.747715 4_1:-59496052 None:intergenic
TACCTGAAGACAGAAGACAG+AGG 0.831496 4_1:-59493985 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAATTTAATATT+TGG - chr4_1:59489207-59489226 None:intergenic 0.0%
!! AGATAAATTAATACTAATTT+AGG - chr4_1:59488146-59488165 None:intergenic 10.0%
!! TAGTATATATAGTATATTAA+TGG - chr4_1:59488180-59488199 None:intergenic 10.0%
!! TCTTCATTTATAAAAATAAA+TGG - chr4_1:59489073-59489092 None:intergenic 10.0%
!!! ATTTATTTTTATAAATGAAG+AGG + chr4_1:59489072-59489091 Msa0560250:intron 10.0%
!! ATATTTGCATATTAAAAAAA+TGG + chr4_1:59489627-59489646 Msa0560250:intron 10.0%
!!! AATATTTTTTAATGTAAAAC+AGG - chr4_1:59489942-59489961 None:intergenic 10.0%
!!! GTTTTTTATTAAATATAACT+CGG - chr4_1:59490024-59490043 None:intergenic 10.0%
!! TTATTTATTTCAATCTTATA+AGG + chr4_1:59490542-59490561 Msa0560250:intron 10.0%
!! AATAATTAGTGATTATATAT+TGG - chr4_1:59490789-59490808 None:intergenic 10.0%
!!! TAACTTTTTTTTTTCTTTTA+AGG - chr4_1:59491098-59491117 None:intergenic 10.0%
!! TTAAAAAAATTATTATTTGG+AGG + chr4_1:59491425-59491444 Msa0560250:intron 10.0%
!!! AATTCTTTAAAAAAACATTA+TGG - chr4_1:59492122-59492141 None:intergenic 10.0%
!!! AAATAGAAAATATTAACTTT+TGG + chr4_1:59493218-59493237 Msa0560250:intron 10.0%
!!! TACAAATTTATTTATTTTTC+AGG + chr4_1:59493385-59493404 Msa0560250:intron 10.0%
!!! ACAAATTTATTTATTTTTCA+GGG + chr4_1:59493386-59493405 Msa0560250:intron 10.0%
!! AAACAAAAATATGTTATTAA+TGG - chr4_1:59494605-59494624 None:intergenic 10.0%
!!! ATTATTTATTTTTGTTTGAA+TGG + chr4_1:59494900-59494919 Msa0560250:intron 10.0%
!! AAATAATTAATATTGAAGTT+TGG + chr4_1:59495476-59495495 Msa0560250:intron 10.0%
!!! AAATTTGAAACAGATATTTT+GGG - chr4_1:59489805-59489824 None:intergenic 15.0%
!!! TAAATTTGAAACAGATATTT+TGG - chr4_1:59489806-59489825 None:intergenic 15.0%
!! CAAATATGGAAATAATTTAT+TGG + chr4_1:59490318-59490337 Msa0560250:intron 15.0%
!! AAAAGAAAGACTTATAAAAA+TGG + chr4_1:59490475-59490494 Msa0560250:intron 15.0%
!!! ATTTAAACTGTTTTCTTTTA+TGG + chr4_1:59490901-59490920 Msa0560250:intron 15.0%
!!! TTTTGTTCTTATTTAGAAAA+GGG - chr4_1:59490985-59491004 None:intergenic 15.0%
!!! TTTTTGTTCTTATTTAGAAA+AGG - chr4_1:59490986-59491005 None:intergenic 15.0%
!!! ATCGTATTTATCATTTTTAT+TGG - chr4_1:59491676-59491695 None:intergenic 15.0%
!!! ATTTTGATATTGAAAATTCT+TGG - chr4_1:59491955-59491974 None:intergenic 15.0%
!!! CGAAAATTTTAAAAACATTA+TGG - chr4_1:59492064-59492083 None:intergenic 15.0%
!! ATATAATTTAGTGTAATCAT+AGG - chr4_1:59494190-59494209 None:intergenic 15.0%
!! TTTACTTAAAACTATAAACA+AGG + chr4_1:59494554-59494573 Msa0560250:CDS 15.0%
!! AATCTTCAATTAAGTAAATA+GGG - chr4_1:59495764-59495783 None:intergenic 15.0%
!! AAATCTTCAATTAAGTAAAT+AGG - chr4_1:59495765-59495784 None:intergenic 15.0%
!!! TTTTTTTTTTTCTGTAATCT+CGG + chr4_1:59495787-59495806 Msa0560250:intron 15.0%
!! TCTCTTAATCTCTTATAATA+TGG + chr4_1:59488742-59488761 Msa0560250:intron 20.0%
!! CTTATAGTAGAAAATGAAAA+TGG - chr4_1:59488786-59488805 None:intergenic 20.0%
!!! AAACTATACTGTTTCTTTTT+CGG + chr4_1:59488876-59488895 Msa0560250:intron 20.0%
!!! TTTTTGAAATTTTTCCGTAT+CGG + chr4_1:59489720-59489739 Msa0560250:intron 20.0%
!!! ATTTTTCTTTATGTCAACTT+TGG - chr4_1:59490191-59490210 None:intergenic 20.0%
!! ACAAGTTAATGATTCAAATA+TGG + chr4_1:59490304-59490323 Msa0560250:intron 20.0%
!!! TTTTTATTTTCATTTAGCTG+TGG + chr4_1:59490568-59490587 Msa0560250:intron 20.0%
!!! TTTTATTTTCATTTAGCTGT+GGG + chr4_1:59490569-59490588 Msa0560250:intron 20.0%
!! ATCTCTTAGAAAATTTATGA+TGG - chr4_1:59490695-59490714 None:intergenic 20.0%
!! TTCACTATATGTATATATGT+AGG - chr4_1:59490759-59490778 None:intergenic 20.0%
!!! AATATTCATCTTTGGAATAT+TGG - chr4_1:59490818-59490837 None:intergenic 20.0%
!!! TCTTTTTCAATATTCATCTT+TGG - chr4_1:59490826-59490845 None:intergenic 20.0%
!!! AGAAATGTTTTATTTTTGTG+TGG + chr4_1:59490843-59490862 Msa0560250:intron 20.0%
!! TTTAAGGAGAAATATCAATT+TGG + chr4_1:59491279-59491298 Msa0560250:intron 20.0%
!! TCATTTATATATGTAAAGAC+TGG - chr4_1:59491377-59491396 None:intergenic 20.0%
!!! CATATATAAATGATGATGTT+AGG + chr4_1:59491384-59491403 Msa0560250:intron 20.0%
!! AATGCAAAAATACGATATAT+CGG + chr4_1:59491525-59491544 Msa0560250:intron 20.0%
!!! CAAAGAAAAACATGAAATTT+TGG + chr4_1:59491796-59491815 Msa0560250:intron 20.0%
!!! TATTTATTGTTTTTTGGTAC+AGG - chr4_1:59491929-59491948 None:intergenic 20.0%
!!! AATACCTTTCGATTTTTTTT+AGG + chr4_1:59491989-59492008 Msa0560250:intron 20.0%
!!! ATACCTTTCGATTTTTTTTA+GGG + chr4_1:59491990-59492009 Msa0560250:intron 20.0%
!!! AATGTTGATTGTTGTATTTT+TGG - chr4_1:59492185-59492204 None:intergenic 20.0%
!! AAAATAGTGAATACCTAAAA+TGG + chr4_1:59492343-59492362 Msa0560250:intron 20.0%
!!! TTAGTTTAGGTATTCATTTT+AGG - chr4_1:59492879-59492898 None:intergenic 20.0%
!!! ATGAAAATGAAGTTTAGTTT+AGG - chr4_1:59492892-59492911 None:intergenic 20.0%
!! TTTATATCACCTTAATATAG+CGG - chr4_1:59492994-59493013 None:intergenic 20.0%
!!! ATTAAGGTGATATAAACTTT+TGG + chr4_1:59492998-59493017 Msa0560250:intron 20.0%
!! TAATCAAATAATTACACTTG+AGG + chr4_1:59493063-59493082 Msa0560250:intron 20.0%
!!! TATTTTTTTAGTCGACTAAT+TGG + chr4_1:59493150-59493169 Msa0560250:intron 20.0%
!!! ACAAAATAGTTTGAAATAGA+CGG - chr4_1:59493270-59493289 None:intergenic 20.0%
!! ATTCTTTCATTAATCTATGT+AGG + chr4_1:59493553-59493572 Msa0560250:intron 20.0%
!! TGAGTTTACAATTAAAGAAA+TGG + chr4_1:59493694-59493713 Msa0560250:CDS 20.0%
!! GAGTTTACAATTAAAGAAAT+GGG + chr4_1:59493695-59493714 Msa0560250:CDS 20.0%
!!! ATTCATTAGTCTCAAAAAAT+GGG - chr4_1:59494061-59494080 None:intergenic 20.0%
!!! TATTCATTAGTCTCAAAAAA+TGG - chr4_1:59494062-59494081 None:intergenic 20.0%
!!! ATTTTTCTGTTCATTATTTC+AGG + chr4_1:59495231-59495250 Msa0560250:intron 20.0%
!!! TATTCTAGAGAGATAAATAA+TGG + chr4_1:59495354-59495373 Msa0560250:intron 20.0%
!! GATTAATATTTCTTCGAATT+TGG - chr4_1:59495557-59495576 None:intergenic 20.0%
!! ACTATAATGGTTGAATTATA+GGG - chr4_1:59495582-59495601 None:intergenic 20.0%
!! TTCAAGAGTAAAAGAATTAT+TGG - chr4_1:59495684-59495703 None:intergenic 20.0%
!!! ATCAATTCCATTCATTTTAT+TGG + chr4_1:59495998-59496017 Msa0560250:CDS 20.0%
!! ATTGAAACCAATAAAATGAA+TGG - chr4_1:59496008-59496027 None:intergenic 20.0%
!!! CTGTAATTTTGATAATAACA+AGG - chr4_1:59496493-59496512 None:intergenic 20.0%
!! TATTATCAAAATTACAGAGA+AGG + chr4_1:59496496-59496515 Msa0560250:CDS 20.0%
! TGGGTAAATACAATTTCAAA+TGG + chr4_1:59487925-59487944 Msa0560250:CDS 25.0%
! ACAATTTCAAATGGAAAGAA+TGG + chr4_1:59487934-59487953 Msa0560250:CDS 25.0%
! CTATGATAATCATACAATAC+AGG - chr4_1:59488098-59488117 None:intergenic 25.0%
!!! GCTATGTTTTGTTGTTAAAT+GGG - chr4_1:59488361-59488380 None:intergenic 25.0%
!!! AGCTATGTTTTGTTGTTAAA+TGG - chr4_1:59488362-59488381 None:intergenic 25.0%
!! CGTCATTTCTATGTATTTTT+AGG - chr4_1:59488675-59488694 None:intergenic 25.0%
! TAATCTCTTATAATATGGCA+TGG + chr4_1:59488747-59488766 Msa0560250:intron 25.0%
! AATTCTGAGCAAATTTATTG+TGG + chr4_1:59488838-59488857 Msa0560250:intron 25.0%
!!! AACTATACTGTTTCTTTTTC+GGG + chr4_1:59488877-59488896 Msa0560250:intron 25.0%
! AGATAAACACAAAAAATAGG+TGG - chr4_1:59489032-59489051 None:intergenic 25.0%
! GAGAGATAAACACAAAAAAT+AGG - chr4_1:59489035-59489054 None:intergenic 25.0%
! AATAAATGGTAGATGCAATT+TGG - chr4_1:59489059-59489078 None:intergenic 25.0%
! TTTAATATTTGGATACTCTC+CGG - chr4_1:59489196-59489215 None:intergenic 25.0%
! ACATTTCCTTTATCTTTCTT+TGG + chr4_1:59489362-59489381 Msa0560250:intron 25.0%
!! TTTCCCTTTCTAAGAAATTA+GGG + chr4_1:59489426-59489445 Msa0560250:intron 25.0%
! AAACCCTAATTTCTTAGAAA+GGG - chr4_1:59489432-59489451 None:intergenic 25.0%
! AATATTGACGATTAAGAGAA+TGG - chr4_1:59489556-59489575 None:intergenic 25.0%
! TCAAAAATCAAGATACGATA+CGG - chr4_1:59489707-59489726 None:intergenic 25.0%
! TATGTGAATATGTGATAGAA+TGG - chr4_1:59489840-59489859 None:intergenic 25.0%
!!! AAACAAATTTTGATGTTCCA+CGG + chr4_1:59490040-59490059 Msa0560250:intron 25.0%
! ACATGTGTATGTTAAAACTT+AGG + chr4_1:59490255-59490274 Msa0560250:intron 25.0%
!!! CTTTTCTGCTTTTAAGTTTT+GGG - chr4_1:59490460-59490479 None:intergenic 25.0%
!!! TCTTTTCTGCTTTTAAGTTT+TGG - chr4_1:59490461-59490480 None:intergenic 25.0%
! AAGACTTATAAAAATGGACA+AGG + chr4_1:59490481-59490500 Msa0560250:intron 25.0%
! TAAGAACCTAGTTTATATTC+TGG + chr4_1:59490714-59490733 Msa0560250:intron 25.0%
! ATACTACCAGAATATAAACT+AGG - chr4_1:59490723-59490742 None:intergenic 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr4_1:59490920-59490939 Msa0560250:intron 25.0%
!! TTGTCAGGAGTTTATAATTT+TGG - chr4_1:59491037-59491056 None:intergenic 25.0%
! GAAATTCATCACATACTTAT+AGG - chr4_1:59491076-59491095 None:intergenic 25.0%
!! AATGATGATGTTAGGATATT+TGG + chr4_1:59491392-59491411 Msa0560250:intron 25.0%
! TTAGCTATTTGGTTAGATAT+TGG + chr4_1:59491455-59491474 Msa0560250:intron 25.0%
! AAGTACCATTATATTCACTA+TGG + chr4_1:59491578-59491597 Msa0560250:intron 25.0%
! TGAATCCATAGTGAATATAA+TGG - chr4_1:59491586-59491605 None:intergenic 25.0%
! GGATTCAAATGTTAACAAAA+TGG + chr4_1:59491599-59491618 Msa0560250:intron 25.0%
! TTAACAAAATGGAAGAACTT+CGG + chr4_1:59491610-59491629 Msa0560250:intron 25.0%
! GAAAAAGAATAAACCTCATT+TGG + chr4_1:59491750-59491769 Msa0560250:intron 25.0%
! TATAAACATTTCTCTCTACA+TGG - chr4_1:59491856-59491875 None:intergenic 25.0%
!!! TGGTCGTATTTATTGTTTTT+TGG - chr4_1:59491935-59491954 None:intergenic 25.0%
! ATTCCCTAAAAAAAATCGAA+AGG - chr4_1:59491996-59492015 None:intergenic 25.0%
!!! TTTTGATTATGAGAATGAAG+TGG - chr4_1:59492273-59492292 None:intergenic 25.0%
! TATCACAATCGATAAACAAA+AGG - chr4_1:59492536-59492555 None:intergenic 25.0%
!!! TTGGTTTTTTTAGAGTTTAG+TGG + chr4_1:59493169-59493188 Msa0560250:intron 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+TGG + chr4_1:59494495-59494514 Msa0560250:intron 25.0%
!!! GTTTTAAGTAAATGATCAGA+AGG - chr4_1:59494546-59494565 None:intergenic 25.0%
! TTATATATGTTGCATTGAAG+AGG - chr4_1:59494643-59494662 None:intergenic 25.0%
! ATACATGCTGAAATTATTTC+AGG + chr4_1:59494689-59494708 Msa0560250:intron 25.0%
!! TTGATAACTAGTTAAAACCT+AGG + chr4_1:59495169-59495188 Msa0560250:intron 25.0%
!!! TATCTCTCTAGAATAGTTTT+TGG - chr4_1:59495349-59495368 None:intergenic 25.0%
!!! AGAGAGATAAATAATGGATT+TGG + chr4_1:59495360-59495379 Msa0560250:intron 25.0%
! CTATAATGGTTGAATTATAG+GGG - chr4_1:59495581-59495600 None:intergenic 25.0%
! CACTATAATGGTTGAATTAT+AGG - chr4_1:59495583-59495602 None:intergenic 25.0%
! CTATAATTCAACCATTATAG+TGG + chr4_1:59495581-59495600 Msa0560250:intron 25.0%
! CTTCTATAATTCCACTATAA+TGG - chr4_1:59495595-59495614 None:intergenic 25.0%
!!! TATTTGTTTTCCTTCAGAAT+CGG - chr4_1:59495653-59495672 None:intergenic 25.0%
! TTGAAATACCTAGTAACAAT+TGG - chr4_1:59495919-59495938 None:intergenic 25.0%
!!! TTTATTTTCTAGCCTAATGT+TGG + chr4_1:59496103-59496122 Msa0560250:CDS 25.0%
!! AATTCAAGGAATCATGATTT+TGG + chr4_1:59496196-59496215 Msa0560250:CDS 25.0%
! TATGTAGCATTTCATACATA+TGG + chr4_1:59496281-59496300 Msa0560250:CDS 25.0%
! TTTCATACATATGGATTTGA+AGG + chr4_1:59496290-59496309 Msa0560250:CDS 25.0%
! CTAAGATTTCCTACTAAAAA+CGG + chr4_1:59496338-59496357 Msa0560250:CDS 25.0%
! TAACATGAGTTACTCAAAAT+GGG + chr4_1:59496418-59496437 Msa0560250:CDS 25.0%
! GATAATAATGGTCCAATAAT+AGG - chr4_1:59496527-59496546 None:intergenic 25.0%
! ACAACATGTATTGTTGTATT+GGG - chr4_1:59496566-59496585 None:intergenic 25.0%
CTTCATCATCATTTCTAATG+TGG - chr4_1:59487848-59487867 None:intergenic 30.0%
! AATGATGATGAAGAGAGAAA+AGG + chr4_1:59487855-59487874 Msa0560250:CDS 30.0%
CTTAACATGGAAGGATATAT+GGG + chr4_1:59487906-59487925 Msa0560250:CDS 30.0%
GGAAACAAATCAATTCTTCA+AGG + chr4_1:59487955-59487974 Msa0560250:CDS 30.0%
TGATAATCATACAATACAGG+AGG - chr4_1:59488095-59488114 None:intergenic 30.0%
ATTGACCTTCTCAAATTAGT+CGG - chr4_1:59488316-59488335 None:intergenic 30.0%
!! CAACAAAACATAGCTTTGTA+TGG + chr4_1:59488367-59488386 Msa0560250:intron 30.0%
ATTCCATCGAAATTGACATA+AGG + chr4_1:59488394-59488413 Msa0560250:intron 30.0%
TTTCCTTATGTCAATTTCGA+TGG - chr4_1:59488400-59488419 None:intergenic 30.0%
AAGACTTACAAAAATTGACG+AGG + chr4_1:59488506-59488525 Msa0560250:intron 30.0%
! AAGCAATTTTGTAGACTCTT+TGG - chr4_1:59488634-59488653 None:intergenic 30.0%
AAAATGGTATACAACCGTTA+AGG - chr4_1:59488705-59488724 None:intergenic 30.0%
TGTGAAAATCAGTCACAAAA+TGG - chr4_1:59488721-59488740 None:intergenic 30.0%
!! ACTATACTGTTTCTTTTTCG+GGG + chr4_1:59488878-59488897 Msa0560250:intron 30.0%
AAACACAAAAAATAGGTGGT+GGG - chr4_1:59489028-59489047 None:intergenic 30.0%
TAAACACAAAAAATAGGTGG+TGG - chr4_1:59489029-59489048 None:intergenic 30.0%
! CTTTCCCTTTCTAAGAAATT+AGG + chr4_1:59489425-59489444 Msa0560250:intron 30.0%
GAAACCCTAATTTCTTAGAA+AGG - chr4_1:59489433-59489452 None:intergenic 30.0%
!! TCAACTTTTTCTTCCAAAAG+TGG + chr4_1:59489451-59489470 Msa0560250:intron 30.0%
! CATTTTCATTGTGGCTTAAA+TGG - chr4_1:59490136-59490155 None:intergenic 30.0%
! TTAAGCACACATTTTCATTG+TGG - chr4_1:59490145-59490164 None:intergenic 30.0%
TGAGTTAAACAAACATTGGT+GGG - chr4_1:59490168-59490187 None:intergenic 30.0%
TTGGTGAGTTAAACAAACAT+TGG - chr4_1:59490172-59490191 None:intergenic 30.0%
!! GATGGATGAGATAATTTGTT+TGG - chr4_1:59490677-59490696 None:intergenic 30.0%
!! ATTCATCTTTGGAATATTGG+AGG - chr4_1:59490815-59490834 None:intergenic 30.0%
TGGTTAAGCATACCATAAAA+GGG - chr4_1:59490935-59490954 None:intergenic 30.0%
TGACATGTGAAAAATTTGTC+AGG - chr4_1:59491052-59491071 None:intergenic 30.0%
! ATTTTCGTTCACATGTTCAT+TGG - chr4_1:59491136-59491155 None:intergenic 30.0%
CTTATTCCTTAATTCGTGTA+GGG + chr4_1:59491212-59491231 Msa0560250:intron 30.0%
TGCATCATGAAACACATATA+TGG - chr4_1:59491240-59491259 None:intergenic 30.0%
GCAAAATTGAGATGACTTTA+AGG + chr4_1:59491263-59491282 Msa0560250:intron 30.0%
GAGGTAAATTCTTAGCTATT+TGG + chr4_1:59491444-59491463 Msa0560250:intron 30.0%
!!! TGGTACTTTTGAAGTTTAGT+TGG - chr4_1:59491566-59491585 None:intergenic 30.0%
! AGTCTCTAAAAAGTCTTTGA+GGG - chr4_1:59491646-59491665 None:intergenic 30.0%
! AAGTCTCTAAAAAGTCTTTG+AGG - chr4_1:59491647-59491666 None:intergenic 30.0%
! TTCTTTTTCTCTAGGTGATT+AGG - chr4_1:59491739-59491758 None:intergenic 30.0%
! GAGGTTTATTCTTTTTCTCT+AGG - chr4_1:59491747-59491766 None:intergenic 30.0%
!!! ATTGTTTTTTGGTACAGGAT+TGG - chr4_1:59491924-59491943 None:intergenic 30.0%
!!! TATTTTTGGTACAGGATTAG+TGG - chr4_1:59492171-59492190 None:intergenic 30.0%
!!! GATTGTTGTATTTTTGGTAC+AGG - chr4_1:59492179-59492198 None:intergenic 30.0%
TAATCGATACCGCTATATTA+AGG + chr4_1:59492982-59493001 Msa0560250:intron 30.0%
AGTCGACTAAAAAAATATCG+AGG - chr4_1:59493147-59493166 None:intergenic 30.0%
!! AACATTTAGAGTGTGAGTTT+TGG - chr4_1:59493195-59493214 None:intergenic 30.0%
TCATCATCATCATTCTTTGA+TGG - chr4_1:59493348-59493367 None:intergenic 30.0%
TACCTTATTGACAACCTTAA+CGG + chr4_1:59493595-59493614 Msa0560250:CDS 30.0%
TCATCAAGAAAAAGAAGTCT+TGG - chr4_1:59493824-59493843 None:intergenic 30.0%
! GCTACTTTAGATCATAAAGA+TGG + chr4_1:59493896-59493915 Msa0560250:CDS 30.0%
ATCATAAAGATGGAATTCAG+AGG + chr4_1:59493906-59493925 Msa0560250:CDS 30.0%
AGTTGAAAAACTTCAGTACT+AGG - chr4_1:59493956-59493975 None:intergenic 30.0%
TCTCAAATTATTATCCGTGT+CGG + chr4_1:59494215-59494234 Msa0560250:intron 30.0%
TAGTGTAAAACTATGAAGCA+CGG - chr4_1:59494256-59494275 None:intergenic 30.0%
!! TGACTGCTTTTGAATAAAAG+CGG + chr4_1:59494314-59494333 Msa0560250:intron 30.0%
TATAAACAAGGACTTTGATC+AGG + chr4_1:59494566-59494585 Msa0560250:CDS 30.0%
TTATTTCAGGATATTGAGAC+AGG + chr4_1:59494702-59494721 Msa0560250:intron 30.0%
TACAAATTGCTTCTTCAGTA+GGG - chr4_1:59494749-59494768 None:intergenic 30.0%
ATACAAATTGCTTCTTCAGT+AGG - chr4_1:59494750-59494769 None:intergenic 30.0%
! CTACTTCATTTTGAACATCT+TGG - chr4_1:59494806-59494825 None:intergenic 30.0%
AGTAGCAGTACTATCTAATA+AGG + chr4_1:59494821-59494840 Msa0560250:CDS 30.0%
!! TAAGAACTGAGCATTGATTA+AGG - chr4_1:59495002-59495021 None:intergenic 30.0%
CTTAGTCATATATGTTGCAT+TGG + chr4_1:59495074-59495093 Msa0560250:CDS 30.0%
CACAAGTTATGACTCAATTA+AGG + chr4_1:59495131-59495150 Msa0560250:CDS 30.0%
TAACTAGTTAAAACCTAGGA+AGG + chr4_1:59495173-59495192 Msa0560250:intron 30.0%
TCACTTCTTTCATTTATAGC+TGG + chr4_1:59495262-59495281 Msa0560250:CDS 30.0%
TTCTTAACTTTCATGAGCAT+TGG + chr4_1:59495286-59495305 Msa0560250:CDS 30.0%
TTAAGTAAATAGGGCTCAAA+TGG - chr4_1:59495755-59495774 None:intergenic 30.0%
CTTGTCAATCAAGATTAAAG+AGG - chr4_1:59495854-59495873 None:intergenic 30.0%
TTTCAACGAGAAAGACAAAA+TGG + chr4_1:59495933-59495952 Msa0560250:CDS 30.0%
TTCAACGAGAAAGACAAAAT+GGG + chr4_1:59495934-59495953 Msa0560250:CDS 30.0%
TAGGCTAGAAAATAAAACAC+TGG - chr4_1:59496099-59496118 None:intergenic 30.0%
ATTGTCCCTAACTATCTAAT+GGG + chr4_1:59496155-59496174 Msa0560250:CDS 30.0%
TGATTCCCATTAGATAGTTA+GGG - chr4_1:59496163-59496182 None:intergenic 30.0%
ATGATTCCCATTAGATAGTT+AGG - chr4_1:59496164-59496183 None:intergenic 30.0%
TATCTAATGGGAATCATAAC+TGG + chr4_1:59496167-59496186 Msa0560250:CDS 30.0%
! ATGAAATTCCTAAGCCATTT+TGG + chr4_1:59496243-59496262 Msa0560250:CDS 30.0%
ATGTATGAAATGCTACATAG+TGG - chr4_1:59496280-59496299 None:intergenic 30.0%
!!! AAGAGGTTTTGAGAGATATT+TGG + chr4_1:59496390-59496409 Msa0560250:CDS 30.0%
GTAACATGAGTTACTCAAAA+TGG + chr4_1:59496417-59496436 Msa0560250:CDS 30.0%
! TTGATCTTGCAATTTTGCTA+GGG + chr4_1:59496441-59496460 Msa0560250:CDS 30.0%
ACTGACATGCAAGATAATAA+TGG - chr4_1:59496539-59496558 None:intergenic 30.0%
CACAACATGTATTGTTGTAT+TGG - chr4_1:59496567-59496586 None:intergenic 30.0%
CAATACAACAATACATGTTG+TGG + chr4_1:59496565-59496584 Msa0560250:CDS 30.0%
ATTTCACAACAACCAGAAGA+TGG - chr4_1:59487766-59487785 None:intergenic 35.0%
CAATGTCTTGAACAGTTCTA+TGG - chr4_1:59487813-59487832 None:intergenic 35.0%
TAGAACTGTTCAAGACATTG+AGG + chr4_1:59487813-59487832 Msa0560250:CDS 35.0%
! TTGATGGTACAAGCTTAACA+TGG + chr4_1:59487893-59487912 Msa0560250:CDS 35.0%
GCTTAACATGGAAGGATATA+TGG + chr4_1:59487905-59487924 Msa0560250:CDS 35.0%
TCAATTCTTCAAGGACTATC+AGG + chr4_1:59487964-59487983 Msa0560250:CDS 35.0%
ACACTACTTGATACATTAGC+AGG + chr4_1:59488045-59488064 Msa0560250:CDS 35.0%
GAACATGAGATATTGTTGAG+AGG + chr4_1:59488424-59488443 Msa0560250:intron 35.0%
AATGACGTTTCTGTCCTTAA+CGG + chr4_1:59488688-59488707 Msa0560250:intron 35.0%
GAAATGGAGAGGAAAACAAA+TGG - chr4_1:59488933-59488952 None:intergenic 35.0%
ATCTCTCTAAATGGAGGAAA+TGG - chr4_1:59488949-59488968 None:intergenic 35.0%
TCCTCCATTTAGAGAGATAA+AGG + chr4_1:59488951-59488970 Msa0560250:intron 35.0%
TGTGCCTTTATCTCTCTAAA+TGG - chr4_1:59488958-59488977 None:intergenic 35.0%
!!! CGTCATCCATTTTGAAGTAT+CGG - chr4_1:59489116-59489135 None:intergenic 35.0%
GAAAGATGCAATTGTTTGTG+TGG - chr4_1:59489410-59489429 None:intergenic 35.0%
AATCAAGATACGATACGGTT+GGG - chr4_1:59489702-59489721 None:intergenic 35.0%
AAATCAAGATACGATACGGT+TGG - chr4_1:59489703-59489722 None:intergenic 35.0%
TATCAGAAGCAAAATGAGAG+AGG - chr4_1:59489973-59489992 None:intergenic 35.0%
! TCTCTCATTTTGCTTCTGAT+AGG + chr4_1:59489972-59489991 Msa0560250:intron 35.0%
GTGAGTTAAACAAACATTGG+TGG - chr4_1:59490169-59490188 None:intergenic 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG - chr4_1:59490297-59490316 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG - chr4_1:59490298-59490317 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG + chr4_1:59490419-59490438 Msa0560250:intron 35.0%
! ATTTTCATTTAGCTGTGGGT+TGG + chr4_1:59490573-59490592 Msa0560250:intron 35.0%
!! TCTGGTAGTATGTTTTTGAG+AGG + chr4_1:59490732-59490751 Msa0560250:intron 35.0%
CTGGTTAAGCATACCATAAA+AGG - chr4_1:59490936-59490955 None:intergenic 35.0%
ACACGAATTAAGGAATAAGG+AGG - chr4_1:59491211-59491230 None:intergenic 35.0%
CCTACACGAATTAAGGAATA+AGG - chr4_1:59491214-59491233 None:intergenic 35.0%
CCTTATTCCTTAATTCGTGT+AGG + chr4_1:59491211-59491230 Msa0560250:intron 35.0%
! GTTTTTCTTTGCTGCAAATG+TGG - chr4_1:59491787-59491806 None:intergenic 35.0%
! GCAGCTTAGGTATTCATTTT+AGG - chr4_1:59492359-59492378 None:intergenic 35.0%
ATGAGAATGAAGTGCAGTTT+AGG - chr4_1:59492478-59492497 None:intergenic 35.0%
! GCAGTTTAGGTATCCATTTT+AGG - chr4_1:59492571-59492590 None:intergenic 35.0%
ATGAGAATGAAGTGCAGTTT+AGG - chr4_1:59492478-59492497 None:intergenic 35.0%
ATGAGAATGAAGTGCAGTTT+AGG - chr4_1:59492478-59492497 None:intergenic 35.0%
! GCAGCTTAGGTATTCATTTT+AGG - chr4_1:59492359-59492378 None:intergenic 35.0%
TTTACAATGCTTCCTACAAC+CGG - chr4_1:59493102-59493121 None:intergenic 35.0%
!! TAGGAAGCATTGTAAACTCA+AGG + chr4_1:59493106-59493125 Msa0560250:intron 35.0%
CACAAACAAGAACTGTCTTA+TGG + chr4_1:59493457-59493476 Msa0560250:CDS 35.0%
AGAACTGTCTTATGGAACTT+CGG + chr4_1:59493465-59493484 Msa0560250:CDS 35.0%
AACCGTTAAGGTTGTCAATA+AGG - chr4_1:59493600-59493619 None:intergenic 35.0%
ATTACCTGACACAATGTCTA+AGG + chr4_1:59493652-59493671 Msa0560250:CDS 35.0%
GATGCAATCAACACAAGAAT+TGG + chr4_1:59493725-59493744 Msa0560250:CDS 35.0%
CAATCAACACAAGAATTGGA+GGG + chr4_1:59493729-59493748 Msa0560250:CDS 35.0%
TTTCTTGATGAACCAACTAG+TGG + chr4_1:59493833-59493852 Msa0560250:CDS 35.0%
! AAACTTCAGTACTAGGTTGA+TGG - chr4_1:59493949-59493968 None:intergenic 35.0%
TCAGGTAGAACAGTTTACTT+TGG + chr4_1:59494001-59494020 Msa0560250:CDS 35.0%
! TGATCAGAAGGATTTTGTAG+AGG - chr4_1:59494534-59494553 None:intergenic 35.0%
ATCTAATAAGGTGCACTATG+TGG + chr4_1:59494833-59494852 Msa0560250:intron 35.0%
! TTTTCAGCACATTAGCTCAA+TGG + chr4_1:59494948-59494967 Msa0560250:intron 35.0%
TCAATGGATCACAAGAAGAA+AGG + chr4_1:59494964-59494983 Msa0560250:CDS 35.0%
AATGCTCAGTTCTTATCGAA+CGG + chr4_1:59495007-59495026 Msa0560250:CDS 35.0%
!! GTTGCATTGGCTATTAGTTT+AGG + chr4_1:59495087-59495106 Msa0560250:CDS 35.0%
! AGGCACTGTTTACTATGATT+TGG + chr4_1:59495107-59495126 Msa0560250:CDS 35.0%
GGCACTGTTTACTATGATTT+GGG + chr4_1:59495108-59495127 Msa0560250:CDS 35.0%
TGTTCATTATTTCAGGATCG+AGG + chr4_1:59495238-59495257 Msa0560250:intron 35.0%
!! TTAACTTTCATGAGCATTGG+TGG + chr4_1:59495289-59495308 Msa0560250:CDS 35.0%
ACGTGAGATTTCTCACTAAT+GGG - chr4_1:59495389-59495408 None:intergenic 35.0%
TACGTGAGATTTCTCACTAA+TGG - chr4_1:59495390-59495409 None:intergenic 35.0%
! GTGAGAAATCTCACGTATTT+TGG + chr4_1:59495393-59495412 Msa0560250:intron 35.0%
TACGCAATCAACACATTAGT+TGG + chr4_1:59495422-59495441 Msa0560250:intron 35.0%
ACATTAGTTGGATTGAGATG+TGG + chr4_1:59495434-59495453 Msa0560250:intron 35.0%
ATGGTTAAGAAGCTCAATCA+AGG - chr4_1:59495736-59495755 None:intergenic 35.0%
GAACTCTACCAATTGTTACT+AGG + chr4_1:59495908-59495927 Msa0560250:intron 35.0%
GAAAGACAAAATGGGCATTA+TGG + chr4_1:59495942-59495961 Msa0560250:CDS 35.0%
GTGTGATTGCATATGTGATT+GGG + chr4_1:59495964-59495983 Msa0560250:CDS 35.0%
!! ATTTTCTAGCCTAATGTTGG+TGG + chr4_1:59496106-59496125 Msa0560250:CDS 35.0%
TAAGACTTTCCACCAACATT+AGG - chr4_1:59496118-59496137 None:intergenic 35.0%
CATTGTCCCTAACTATCTAA+TGG + chr4_1:59496154-59496173 Msa0560250:CDS 35.0%
!! CAAGGAATCATGATTTTGGT+TGG + chr4_1:59496200-59496219 Msa0560250:CDS 35.0%
!!! GAATCATGATTTTGGTTGGA+GGG + chr4_1:59496204-59496223 Msa0560250:CDS 35.0%
AATGGCTTAGGAATTTCATG+TGG - chr4_1:59496242-59496261 None:intergenic 35.0%
TTGTTCAAGAATGAGTACGA+AGG + chr4_1:59496314-59496333 Msa0560250:CDS 35.0%
TTTCCTACTAAAAACGGACA+AGG + chr4_1:59496344-59496363 Msa0560250:CDS 35.0%
! GTTGATCTTGCAATTTTGCT+AGG + chr4_1:59496440-59496459 Msa0560250:CDS 35.0%
TATACAACATGTCCATCCAA+AGG - chr4_1:59496608-59496627 None:intergenic 35.0%
CATTTCTAATGTGGTTGTGC+TGG - chr4_1:59487839-59487858 None:intergenic 40.0%
GAAGATGAAGCTGAAGTTGA+TGG + chr4_1:59487877-59487896 Msa0560250:CDS 40.0%
TGGTACAAGCTTAACATGGA+AGG + chr4_1:59487897-59487916 Msa0560250:CDS 40.0%
ATTATAGCCAAGAGTTGACC+AGG - chr4_1:59488000-59488019 None:intergenic 40.0%
TGGTCAACTCTTGGCTATAA+TGG + chr4_1:59487999-59488018 Msa0560250:CDS 40.0%
GGTCAACTCTTGGCTATAAT+GGG + chr4_1:59488000-59488019 Msa0560250:CDS 40.0%
GAAGACCGACTAATTTGAGA+AGG + chr4_1:59488308-59488327 Msa0560250:intron 40.0%
!! ATTGACTTGAGACTTTGGAG+TGG - chr4_1:59488452-59488471 None:intergenic 40.0%
!! CACACATTGACTTGAGACTT+TGG - chr4_1:59488457-59488476 None:intergenic 40.0%
AAAACTCGATATCCGACACA+AGG + chr4_1:59488598-59488617 Msa0560250:intron 40.0%
TCTAAATGGAGGAAATGGAG+AGG - chr4_1:59488944-59488963 None:intergenic 40.0%
GCCTTTATCTCTCTAAATGG+AGG - chr4_1:59488955-59488974 None:intergenic 40.0%
GAAGCTCCGATACTTCAAAA+TGG + chr4_1:59489107-59489126 Msa0560250:intron 40.0%
ACACAAGTATCCGTGTGTAT+CGG - chr4_1:59489264-59489283 None:intergenic 40.0%
CTGGCACCAAAGAAAGATAA+AGG - chr4_1:59489371-59489390 None:intergenic 40.0%
ATGCAATTGTTTGTGTGGTG+TGG - chr4_1:59489405-59489424 None:intergenic 40.0%
ATGTTAATGTGCTACGAGAC+TGG + chr4_1:59489586-59489605 Msa0560250:intron 40.0%
!! ATTTTTCCGTATCGGCGTAT+CGG + chr4_1:59489728-59489747 Msa0560250:intron 40.0%
! TTTTGATGTTCCACGGTTGT+AGG + chr4_1:59490047-59490066 Msa0560250:intron 40.0%
TTCAAAACTTCCTACAACCG+TGG - chr4_1:59490060-59490079 None:intergenic 40.0%
CCAATCATACCATCTACTTC+CGG + chr4_1:59490105-59490124 Msa0560250:intron 40.0%
CAATCATACCATCTACTTCC+GGG + chr4_1:59490106-59490125 Msa0560250:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr4_1:59490280-59490299 Msa0560250:intron 40.0%
GTTTCTTAACATGTGCCCTA+AGG + chr4_1:59490418-59490437 Msa0560250:intron 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr4_1:59490436-59490455 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr4_1:59490437-59490456 None:intergenic 40.0%
TAGAAAAGGGTCATGCTAAC+CGG - chr4_1:59490972-59490991 None:intergenic 40.0%
TCTGTATACACGTCAAACGT+CGG - chr4_1:59491175-59491194 None:intergenic 40.0%
ATGGTACCCTACACGAATTA+AGG - chr4_1:59491221-59491240 None:intergenic 40.0%
TTCTTTGCTGCAAATGTGGA+GGG - chr4_1:59491783-59491802 None:intergenic 40.0%
TTTCTTTGCTGCAAATGTGG+AGG - chr4_1:59491784-59491803 None:intergenic 40.0%
ATGAGAATGAAGTGGAGCTT+AGG - chr4_1:59492265-59492284 None:intergenic 40.0%
ATGAGAATGAAGTGCAGCTT+AGG - chr4_1:59492372-59492391 None:intergenic 40.0%
ATGAGAATGAAGTGCAGCTT+AGG - chr4_1:59492372-59492391 None:intergenic 40.0%
TTACAATGCTTCCTACAACC+GGG - chr4_1:59493101-59493120 None:intergenic 40.0%
AGCTCAAACACAAGACAAAC+AGG + chr4_1:59493415-59493434 Msa0560250:CDS 40.0%
GCTCAAACACAAGACAAACA+GGG + chr4_1:59493416-59493435 Msa0560250:CDS 40.0%
CTCAAACACAAGACAAACAG+GGG + chr4_1:59493417-59493436 Msa0560250:CDS 40.0%
ACAGGGGAAATTCTGATCAA+TGG + chr4_1:59493433-59493452 Msa0560250:CDS 40.0%
TCTTCCTTAGACATTGTGTC+AGG - chr4_1:59493659-59493678 None:intergenic 40.0%
GCAATCAACACAAGAATTGG+AGG + chr4_1:59493728-59493747 Msa0560250:CDS 40.0%
AAAGAAGTCTTGGACGTGTT+AGG - chr4_1:59493814-59493833 None:intergenic 40.0%
!! TTCAGTACTAGGTTGATGGA+TGG - chr4_1:59493945-59493964 None:intergenic 40.0%
AGATTAGGTGTTTCCTGTGT+CGG + chr4_1:59494133-59494152 Msa0560250:intron 40.0%
! TGTAATCATAGGTGTCGTGT+CGG - chr4_1:59494179-59494198 None:intergenic 40.0%
! TCAGAAGGATTTTGTAGAGG+AGG - chr4_1:59494531-59494550 None:intergenic 40.0%
TCAGGATATTGAGACAGGAT+TGG + chr4_1:59494707-59494726 Msa0560250:intron 40.0%
! ATATTGAGACAGGATTGGCA+GGG + chr4_1:59494712-59494731 Msa0560250:CDS 40.0%
AGTTCTTATCGAACGGTCAT+CGG + chr4_1:59495014-59495033 Msa0560250:CDS 40.0%
TGAGAAATCACAACCTTCCT+AGG - chr4_1:59495189-59495208 None:intergenic 40.0%
TTCATGTCTTCCACAAAGGA+AGG - chr4_1:59495319-59495338 None:intergenic 40.0%
TTCCTTTGTGGAAGACATGA+AGG + chr4_1:59495318-59495337 Msa0560250:CDS 40.0%
TACCTTCATGTCTTCCACAA+AGG - chr4_1:59495323-59495342 None:intergenic 40.0%
ATGTGTGTGATTGTTGACGA+CGG + chr4_1:59495526-59495545 Msa0560250:intron 40.0%
TGTTAAGCTTCCGATTCTGA+AGG + chr4_1:59495640-59495659 Msa0560250:intron 40.0%
GGTGTGATTGCATATGTGAT+TGG + chr4_1:59495963-59495982 Msa0560250:CDS 40.0%
GGGTAATAAGTTATAGCTGC+TGG - chr4_1:59496035-59496054 None:intergenic 40.0%
AAATCCTTTCTGTAGACCAG+GGG - chr4_1:59496057-59496076 None:intergenic 40.0%
CAAATCCTTTCTGTAGACCA+GGG - chr4_1:59496058-59496077 None:intergenic 40.0%
TCAAATCCTTTCTGTAGACC+AGG - chr4_1:59496059-59496078 None:intergenic 40.0%
! ATAACTGGTGCTGGAATTCA+AGG + chr4_1:59496182-59496201 Msa0560250:CDS 40.0%
!!! GGAATCATGATTTTGGTTGG+AGG + chr4_1:59496203-59496222 Msa0560250:CDS 40.0%
GGATATCTCCAAAATGGCTT+AGG - chr4_1:59496254-59496273 None:intergenic 40.0%
TGGAGTGGATATCTCCAAAA+TGG - chr4_1:59496260-59496279 None:intergenic 40.0%
! TGAAATGCTACATAGTGGAG+TGG - chr4_1:59496275-59496294 None:intergenic 40.0%
GGCACAAATAGTTACATCAC+TGG + chr4_1:59496365-59496384 Msa0560250:CDS 40.0%
TAGTTACATCACTGGTGAAG+AGG + chr4_1:59496373-59496392 Msa0560250:CDS 40.0%
GAGAAGGTGAAGCCTATTAT+TGG + chr4_1:59496512-59496531 Msa0560250:CDS 40.0%
ACCAGAAGATGGAAGACACA+GGG - chr4_1:59487755-59487774 None:intergenic 45.0%
AACCAGAAGATGGAAGACAC+AGG - chr4_1:59487756-59487775 None:intergenic 45.0%
CTATCAGGTTATGCTAAGCC+TGG + chr4_1:59487979-59487998 Msa0560250:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG + chr4_1:59488009-59488028 Msa0560250:CDS 45.0%
TCAATCCCATCGTCTATGTG+CGG + chr4_1:59488331-59488350 Msa0560250:intron 45.0%
!! GGATTAGTCGATCCTTGTGT+CGG - chr4_1:59488613-59488632 None:intergenic 45.0%
GGAGAGGAAAACAAATGGAG+AGG - chr4_1:59488928-59488947 None:intergenic 45.0%
GGTGAGACCCACTTAATGAT+AGG + chr4_1:59489001-59489020 Msa0560250:intron 45.0%
GGTGGGTCCTATCATTAAGT+GGG - chr4_1:59489011-59489030 None:intergenic 45.0%
! TGGTGGGTCCTATCATTAAG+TGG - chr4_1:59489012-59489031 None:intergenic 45.0%
!! TTGAAGTATCGGAGCTTCAC+AGG - chr4_1:59489105-59489124 None:intergenic 45.0%
!! GATACGTATCGGGAAGTATC+AGG - chr4_1:59489174-59489193 None:intergenic 45.0%
GATACTTCCCGATACGTATC+CGG + chr4_1:59489174-59489193 Msa0560250:intron 45.0%
ATACTCTCCGGATACGTATC+GGG - chr4_1:59489184-59489203 None:intergenic 45.0%
GATACTCTCCGGATACGTAT+CGG - chr4_1:59489185-59489204 None:intergenic 45.0%
CACAAGTATCCGTGTGTATC+GGG - chr4_1:59489263-59489282 None:intergenic 45.0%
TTGTTTGTGTGGTGTGGTGT+GGG - chr4_1:59489399-59489418 None:intergenic 45.0%
ATTGTTTGTGTGGTGTGGTG+TGG - chr4_1:59489400-59489419 None:intergenic 45.0%
CACCGTTGAAGTCTTGGTAT+CGG + chr4_1:59489491-59489510 Msa0560250:intron 45.0%
GTCCGATACCAAGACTTCAA+CGG - chr4_1:59489496-59489515 None:intergenic 45.0%
TCCGTATCGTATCTCGTATC+CGG + chr4_1:59489763-59489782 Msa0560250:intron 45.0%
TCCGGATACGAGATACGATA+CGG - chr4_1:59489767-59489786 None:intergenic 45.0%
GGGTTAAGATCTGTGAAGTC+CGG - chr4_1:59489785-59489804 None:intergenic 45.0%
CCGGAAGTAGATGGTATGAT+TGG - chr4_1:59490108-59490127 None:intergenic 45.0%
CACTGCTTCTCTAACCGTTA+AGG - chr4_1:59493612-59493631 None:intergenic 45.0%
TCAACACAAGAATTGGAGGG+TGG + chr4_1:59493732-59493751 Msa0560250:CDS 45.0%
CAACACAAGAATTGGAGGGT+GGG + chr4_1:59493733-59493752 Msa0560250:CDS 45.0%
AACACAAGAATTGGAGGGTG+GGG + chr4_1:59493734-59493753 Msa0560250:CDS 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG + chr4_1:59493752-59493771 Msa0560250:CDS 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG + chr4_1:59493753-59493772 Msa0560250:CDS 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG + chr4_1:59493754-59493773 Msa0560250:CDS 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG + chr4_1:59493755-59493774 Msa0560250:CDS 45.0%
GCACTATCAAGTCCACTAGT+TGG - chr4_1:59493848-59493867 None:intergenic 45.0%
AACCTCTGTCTTCTGTCTTC+AGG + chr4_1:59493983-59494002 Msa0560250:CDS 45.0%
TACCTGAAGACAGAAGACAG+AGG - chr4_1:59493988-59494007 None:intergenic 45.0%
!! GAGGAGTGTTCATGCTTCAT+AGG - chr4_1:59494113-59494132 None:intergenic 45.0%
GCATGAACACTCCTCAGATT+AGG + chr4_1:59494118-59494137 Msa0560250:intron 45.0%
CACAGGAAACACCTAATCTG+AGG - chr4_1:59494132-59494151 None:intergenic 45.0%
! GGATTTTGTAGAGGAGGACA+TGG - chr4_1:59494525-59494544 None:intergenic 45.0%
! GATATTGAGACAGGATTGGC+AGG + chr4_1:59494711-59494730 Msa0560250:CDS 45.0%
CACAAGAAGAAAGGACATGC+TGG + chr4_1:59494973-59494992 Msa0560250:CDS 45.0%
GTGAACATGTTTCGCGATCT+AGG + chr4_1:59495036-59495055 Msa0560250:CDS 45.0%
TTCGCGATCTAGGCTATTAC+TGG + chr4_1:59495046-59495065 Msa0560250:CDS 45.0%
!! TGGTGGATTTCCTTCCTTTG+TGG + chr4_1:59495306-59495325 Msa0560250:CDS 45.0%
CACACATTCATGCACGTTCT+TGG - chr4_1:59495513-59495532 None:intergenic 45.0%
GCTATAACTTATTACCCCCC+TGG + chr4_1:59496038-59496057 Msa0560250:CDS 45.0%
AATCCTTTCTGTAGACCAGG+GGG - chr4_1:59496056-59496075 None:intergenic 45.0%
ATGGGAATCATAACTGGTGC+TGG + chr4_1:59496173-59496192 Msa0560250:CDS 45.0%
!!! GTGCCTTGTCCGTTTTTAGT+AGG - chr4_1:59496350-59496369 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTAACT+TGG + chr4_1:59488276-59488295 Msa0560250:intron 5.0%
!! AAATAAAAAATAATTAATGA+TGG + chr4_1:59488980-59488999 Msa0560250:intron 5.0%
!!! TTATATAATATTTCTTTTTT+AGG + chr4_1:59490396-59490415 Msa0560250:intron 5.0%
!!! AAAATATTTTTACTAATATT+TGG - chr4_1:59490620-59490639 None:intergenic 5.0%
!!! CTTTTAAAAAAATTATTATT+TGG + chr4_1:59491422-59491441 Msa0560250:intron 5.0%
!!! TTTAGTTTTTTTTTTTTTTT+TGG - chr4_1:59493514-59493533 None:intergenic 5.0%
TCCCTGTGTCTTCCATCTTC+TGG + chr4_1:59487751-59487770 Msa0560250:CDS 50.0%
TGCTAAGCCTGGTCAACTCT+TGG + chr4_1:59487990-59488009 Msa0560250:CDS 50.0%
!! ATAATGGGTCCTTCTGGCTG+TGG + chr4_1:59488015-59488034 Msa0560250:CDS 50.0%
GACATCCGCACATAGACGAT+GGG - chr4_1:59488339-59488358 None:intergenic 50.0%
TGCAAGATACGCAGGGGATA+CGG - chr4_1:59489141-59489160 None:intergenic 50.0%
TATCGGTGCAAGATACGCAG+GGG - chr4_1:59489147-59489166 None:intergenic 50.0%
! GTATCGGTGCAAGATACGCA+GGG - chr4_1:59489148-59489167 None:intergenic 50.0%
!! GGGAAGTATCAGGCAGGTAT+CGG - chr4_1:59489164-59489183 None:intergenic 50.0%
! CGGGACGTATCGGAAAGTAT+CGG - chr4_1:59489244-59489263 None:intergenic 50.0%
TTTGGCCACCGTTGAAGTCT+TGG + chr4_1:59489485-59489504 Msa0560250:intron 50.0%
CGATACCAAGACTTCAACGG+TGG - chr4_1:59489493-59489512 None:intergenic 50.0%
! GTCTTGGTATCGGACGACTT+TGG + chr4_1:59489501-59489520 Msa0560250:intron 50.0%
ACTACACCGATACGCCGATA+CGG - chr4_1:59489737-59489756 None:intergenic 50.0%
! TGTGGCTTAAATGGAGCACC+CGG - chr4_1:59490127-59490146 None:intergenic 50.0%
! TTGAGGTTGAAGTGCTAGCC+CGG + chr4_1:59493080-59493099 Msa0560250:intron 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG + chr4_1:59493743-59493762 Msa0560250:CDS 50.0%
GCATAAGTGGGGGTCAGAAA+AGG + chr4_1:59493765-59493784 Msa0560250:CDS 50.0%
CTTCCACTGCTTGTGAGGTT+AGG + chr4_1:59494029-59494048 Msa0560250:intron 50.0%
GTTCCTAACCTCACAAGCAG+TGG - chr4_1:59494035-59494054 None:intergenic 50.0%
ATGAAGCACGGACACAGACA+CGG - chr4_1:59494244-59494263 None:intergenic 50.0%
ATCCTTTCTGTAGACCAGGG+GGG - chr4_1:59496055-59496074 None:intergenic 50.0%
GAAGCCTGATGCTACTCCTT+TGG + chr4_1:59496589-59496608 Msa0560250:CDS 50.0%
CCATCCAAAGGAGTAGCATC+AGG - chr4_1:59496596-59496615 None:intergenic 50.0%
CCTGATGCTACTCCTTTGGA+TGG + chr4_1:59496593-59496612 Msa0560250:CDS 50.0%
GTAGACTTGCCACAGCCAGA+AGG - chr4_1:59488027-59488046 None:intergenic 55.0%
GGACATCCGCACATAGACGA+TGG - chr4_1:59488340-59488359 None:intergenic 55.0%
!! GGTATCGGTGCAAGATACGC+AGG - chr4_1:59489149-59489168 None:intergenic 55.0%
!! CGTATCGGGAAGTATCAGGC+AGG - chr4_1:59489170-59489189 None:intergenic 55.0%
CCGTGTGTATCGGGACGTAT+CGG - chr4_1:59489254-59489273 None:intergenic 55.0%
CCGATACGTCCCGATACACA+CGG + chr4_1:59489251-59489270 Msa0560250:intron 55.0%
! AAGTGGACGGCGACCACTTT+TGG - chr4_1:59489467-59489486 None:intergenic 55.0%
AAAGTGGTCGCCGTCCACTT+TGG + chr4_1:59489467-59489486 Msa0560250:intron 55.0%
TCAACGGTGGCCAAAGTGGA+CGG - chr4_1:59489480-59489499 None:intergenic 55.0%
GACTTCAACGGTGGCCAAAG+TGG - chr4_1:59489484-59489503 None:intergenic 55.0%
! ATGGAGCACCCGGAAGTAGA+TGG - chr4_1:59490117-59490136 None:intergenic 55.0%
TCATGCTAACCGGTGCTCTC+GGG - chr4_1:59490962-59490981 None:intergenic 55.0%
GTCATGCTAACCGGTGCTCT+CGG - chr4_1:59490963-59490982 None:intergenic 55.0%
CTGCAAATGTGGAGGGCAGA+GGG - chr4_1:59491776-59491795 None:intergenic 55.0%
! TGAAGTGCTAGCCCGGTTGT+AGG + chr4_1:59493087-59493106 Msa0560250:intron 55.0%
ACCTGCTTCCACTGCTTGTG+AGG + chr4_1:59494024-59494043 Msa0560250:CDS 55.0%
ACCTCACAAGCAGTGGAAGC+AGG - chr4_1:59494028-59494047 None:intergenic 55.0%
TGAAGCACGGACACAGACAC+GGG - chr4_1:59494243-59494262 None:intergenic 55.0%
! TGAGACAGGATTGGCAGGGA+TGG + chr4_1:59494716-59494735 Msa0560250:CDS 55.0%
! GAGACAGGATTGGCAGGGAT+GGG + chr4_1:59494717-59494736 Msa0560250:CDS 55.0%
TACCCCCCTGGTCTACAGAA+AGG + chr4_1:59496050-59496069 Msa0560250:CDS 55.0%
TGGTGTGGTGTGGGTCGTAC+TGG - chr4_1:59489390-59489409 None:intergenic 60.0%
CATGCTAACCGGTGCTCTCG+GGG - chr4_1:59490961-59490980 None:intergenic 60.0%
GCTGCAAATGTGGAGGGCAG+AGG - chr4_1:59491777-59491796 None:intergenic 60.0%
TACTGACGCGTGTCCGACAC+AGG - chr4_1:59494149-59494168 None:intergenic 60.0%
! AACCAGTGCCCCGAGAGCAC+CGG + chr4_1:59490950-59490969 Msa0560250:intron 65.0%
GGAGGGCAGAGGGCCAAATG+AGG - chr4_1:59491766-59491785 None:intergenic 65.0%
!! CACAGACACGGGCACCGACA+CGG - chr4_1:59494232-59494251 None:intergenic 65.0%
AACCGGTGCTCTCGGGGCAC+TGG - chr4_1:59490955-59490974 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 59487745 59496628 59487745 ID=Msa0560250;Name=Msa0560250
chr4_1 mRNA 59487745 59496628 59487745 ID=Msa0560250-mRNA-1;Parent=Msa0560250;Name=Msa0560250-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.28|0.12|1|1|1|8|0|691
chr4_1 exon 59487745 59488066 59487745 ID=Msa0560250-mRNA-1:exon:18398;Parent=Msa0560250-mRNA-1
chr4_1 exon 59493407 59493486 59493407 ID=Msa0560250-mRNA-1:exon:18399;Parent=Msa0560250-mRNA-1
chr4_1 exon 59493575 59494045 59493575 ID=Msa0560250-mRNA-1:exon:18400;Parent=Msa0560250-mRNA-1
chr4_1 exon 59494501 59494587 59494501 ID=Msa0560250-mRNA-1:exon:18401;Parent=Msa0560250-mRNA-1
chr4_1 exon 59494711 59494842 59494711 ID=Msa0560250-mRNA-1:exon:18402;Parent=Msa0560250-mRNA-1
chr4_1 exon 59494955 59495152 59494955 ID=Msa0560250-mRNA-1:exon:18403;Parent=Msa0560250-mRNA-1
chr4_1 exon 59495253 59495339 59495253 ID=Msa0560250-mRNA-1:exon:18404;Parent=Msa0560250-mRNA-1
chr4_1 exon 59495930 59496628 59495930 ID=Msa0560250-mRNA-1:exon:18405;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59487745 59488066 59487745 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59493407 59493486 59493407 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59493575 59494045 59493575 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59494501 59494587 59494501 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59494711 59494842 59494711 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59494955 59495152 59494955 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59495253 59495339 59495253 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
chr4_1 CDS 59495930 59496628 59495930 ID=Msa0560250-mRNA-1:cds;Parent=Msa0560250-mRNA-1
Gene Sequence

>Msa0560250

ATGGCTTCCCTGTGTCTTCCATCTTCTGGTTGTTGTGAAATTAAAACAAGTTCAGAATCAGTACTCCATAGAACTGTTCAAGACATTGAGGCCAGCACAACCACATTAGAAATGATGATGAAGAGAGAAAAGGAAGATGAAGCTGAAGTTGATGGTACAAGCTTAACATGGAAGGATATATGGGTAAATACAATTTCAAATGGAAAGAATGGAAACAAATCAATTCTTCAAGGACTATCAGGTTATGCTAAGCCTGGTCAACTCTTGGCTATAATGGGTCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACATTAGCAGGGAGATTAAGCTCAAACACAAGACAAACAGGGGAAATTCTGATCAATGGTCACAAACAAGAACTGTCTTATGGAACTTCGGCTTATGTCACACAAGATGATACCTTATTGACAACCTTAACGGTTAGAGAAGCAGTGTACTATTCAGCTCAACTTCAATTACCTGACACAATGTCTAAGGAAGAGAAGAAAGAGAGAGCTGAGTTTACAATTAAAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAGAAAAGGAGAGTCAGCATTTGCATTGAGATCCTAACACGTCCAAGACTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATTGCTACTTTAGATCATAAAGATGGAATTCAGAGGACTATTATTACATCCATCCATCAACCTAGTACTGAAGTTTTTCAACTCTTTCATAACCTCTGTCTTCTGTCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCCACTGCTTGTGAGTTTTTTGCTTTGAATGGATTTCCATGTCCTCCTCTACAAAATCCTTCTGATCATTTACTTAAAACTATAAACAAGGACTTTGATCAGGATATTGAGACAGGATTGGCAGGGATGGGAACAATCCCTACTGAAGAAGCAATTTGTATTCTTGTGAGTTCATATAAATCATCTGAAATGAGCCAAGATGTTCAAAATGAAGTAGCAGTACTATCTAATAAGCACATTAGCTCAATGGATCACAAGAAGAAAGGACATGCTGGATTCCTTAATCAATGCTCAGTTCTTATCGAACGGTCATCGGTGAACATGTTTCGCGATCTAGGCTATTACTGGTTACGCTTAGTCATATATGTTGCATTGGCTATTAGTTTAGGCACTGTTTACTATGATTTGGGCACAAGTTATGACTCAATTAAGGATCGAGGTTCACTTCTTTCATTTATAGCTGGATTCTTAACTTTCATGAGCATTGGTGGATTTCCTTCCTTTGTGGAAGACATGAAGGTATTTCAACGAGAAAGACAAAATGGGCATTATGGTGTGATTGCATATGTGATTGGGAACACTTTATCATCAATTCCATTCATTTTATTGGTTTCAATAATTCCAGCAGCTATAACTTATTACCCCCCTGGTCTACAGAAAGGATTTGAACACTTTTTGTACTTTGCCAGTGTTTTATTTTCTAGCCTAATGTTGGTGGAAAGTCTTATGATGATAGTTGCAAGCATTGTCCCTAACTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGATTTTGGTTGGAGGGTTCTTTAAATTGCCACATGAAATTCCTAAGCCATTTTGGAGATATCCACTCCACTATGTAGCATTTCATACATATGGATTTGAAGGATTGTTCAAGAATGAGTACGAAGGACTAAGATTTCCTACTAAAAACGGACAAGGCACAAATAGTTACATCACTGGTGAAGAGGTTTTGAGAGATATTTGGCAAAGTAACATGAGTTACTCAAAATGGGTTGATCTTGCAATTTTGCTAGGGATGATTGTTTTGTATCGAGTTTTGTTCCTTGTTATTATCAAAATTACAGAGAAGGTGAAGCCTATTATTGGACCATTATTATCTTGCATGTCAGTGTCTCCCAATACAACAATACATGTTGTGGAGAAGCCTGATGCTACTCCTTTGGATGGACATGTTGTATAA
Protein sequence

>Msa0560250

MASLCLPSSGCCEIKTSSESVLHRTVQDIEASTTTLEMMMKREKEDEAEVDGTSLTWKDIWVNTISNGKNGNKSILQGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLSSNTRQTGEILINGHKQELSYGTSAYVTQDDTLLTTLTVREAVYYSAQLQLPDTMSKEEKKERAEFTIKEMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIATLDHKDGIQRTIITSIHQPSTEVFQLFHNLCLLSSGRTVYFGPASTACEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIETGLAGMGTIPTEEAICILVSSYKSSEMSQDVQNEVAVLSNKHISSMDHKKKGHAGFLNQCSVLIERSSVNMFRDLGYYWLRLVIYVALAISLGTVYYDLGTSYDSIKDRGSLLSFIAGFLTFMSIGGFPSFVEDMKVFQRERQNGHYGVIAYVIGNTLSSIPFILLVSIIPAAITYYPPGLQKGFEHFLYFASVLFSSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMILVGGFFKLPHEIPKPFWRYPLHYVAFHTYGFEGLFKNEYEGLRFPTKNGQGTNSYITGEEVLRDIWQSNMSYSKWVDLAILLGMIVLYRVLFLVIIKITEKVKPIIGPLLSCMSVSPNTTIHVVEKPDATPLDGHVV*