AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036360 MtrunA17_Chr7g0260671 92.644 503 37 0 1 503 1 503 0.0 964
Msa1036360 MtrunA17_Chr7g0260681 97.143 420 12 0 1 420 1 420 0.0 869
Msa1036360 MtrunA17_Chr4g0039301 53.380 429 184 10 73 495 99 517 8.91e-167 482
Msa1036360 MtrunA17_Chr2g0283561 40.441 408 215 5 74 474 39 425 9.34e-101 309
Msa1036360 MtrunA17_Chr4g0046001 39.667 421 217 8 74 488 13 402 1.49e-98 303
Msa1036360 MtrunA17_Chr4g0046011 38.717 421 221 8 74 488 4 393 3.81e-97 299
Msa1036360 MtrunA17_Chr4g0041311 34.000 450 238 7 52 475 14 430 2.51e-83 265
Msa1036360 MtrunA17_Chr7g0214711 41.193 352 175 10 74 418 105 431 3.10e-83 266
Msa1036360 MtrunA17_Chr5g0399641 38.786 379 199 12 74 437 135 495 3.41e-80 259
Msa1036360 MtrunA17_Chr7g0250611 38.874 373 188 12 74 434 75 419 1.86e-79 254
Msa1036360 MtrunA17_Chr7g0250561 33.906 466 245 14 10 438 11 450 2.72e-77 249
Msa1036360 MtrunA17_Chr4g0055691 38.753 369 196 9 78 437 133 480 3.19e-71 235
Msa1036360 MtrunA17_Chr7g0260691 97.727 44 1 0 460 503 13 56 3.11e-23 92.8
Msa1036360 MtrunA17_Chr2g0286301 32.530 166 84 8 198 359 98 239 2.12e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036360 AT2G30550.2 57.870 432 173 6 71 497 98 525 0.0 538
Msa1036360 AT1G06800.1 57.243 428 173 7 74 495 85 508 0.0 525
Msa1036360 AT2G30550.1 60.393 356 132 6 71 421 98 449 1.59e-161 466
Msa1036360 AT1G51440.1 48.833 514 225 12 20 502 15 521 3.06e-158 460
Msa1036360 AT1G06800.2 59.207 353 134 7 74 420 85 433 2.44e-156 452
Msa1036360 AT1G30370.1 42.469 405 216 7 74 473 114 506 1.20e-109 336
Msa1036360 AT1G05800.1 41.803 366 187 9 59 419 66 410 6.11e-92 288
Msa1036360 AT1G06250.1 38.293 410 222 6 74 474 5 392 3.02e-90 282
Msa1036360 AT4G18550.1 36.029 408 232 4 76 475 21 407 2.70e-88 277
Msa1036360 AT4G18550.2 36.029 408 232 4 76 475 38 424 4.30e-88 277
Msa1036360 AT2G31690.1 40.052 387 208 10 66 447 80 447 6.86e-87 276
Msa1036360 AT2G42690.1 35.308 422 224 6 77 475 7 402 3.58e-84 266
Msa1036360 AT4G16820.1 40.404 396 195 13 55 436 110 478 4.30e-78 254
Msa1036360 AT2G44810.2 35.459 392 214 10 62 434 72 443 1.01e-77 251
Msa1036360 AT2G44810.1 36.486 370 198 9 82 434 4 353 4.11e-77 246
Msa1036360 AT4G18550.3 37.818 275 165 2 76 344 38 312 6.50e-64 211
Msa1036360 AT1G06250.2 36.789 299 163 3 181 474 1 278 7.44e-61 202
Msa1036360 AT5G18640.5 31.148 183 90 10 182 359 89 240 3.11e-11 64.7
Msa1036360 AT5G18640.1 31.148 183 90 10 182 359 89 240 7.37e-11 64.3
Msa1036360 AT5G18640.3 31.148 183 90 10 182 359 89 240 7.37e-11 64.3
Msa1036360 AT5G18640.4 31.148 183 90 10 182 359 101 252 9.05e-11 63.9
Msa1036360 AT5G18640.2 31.148 183 90 10 182 359 101 252 9.05e-11 63.9

Find 129 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGATTGGAGAAACATTT+AGG 0.169595 7_1:+72709387 Msa1036360:CDS
CAAGGAATGTCTTGGTAAAT+AGG 0.211928 7_1:-72709057 None:intergenic
ATTAGTTCAGATCGCATTAT+TGG 0.219681 7_1:-72708439 None:intergenic
CGGTTAAATGTTAGGGAAAA+TGG 0.236210 7_1:+72709300 Msa1036360:CDS
TTCAAATCTTGCCTCCAATT+TGG 0.241101 7_1:-72711652 None:intergenic
CGAGATTTCTTAAAGAAATC+TGG 0.241938 7_1:-72708634 None:intergenic
AGATGATTGGGTTGGCCTTT+TGG 0.250064 7_1:+72708405 Msa1036360:CDS
GGACATTGCTTTGGTGAATA+AGG 0.258869 7_1:+72711594 Msa1036360:CDS
GTTGGGAACGTGAAATTTAA+AGG 0.276041 7_1:+72709366 Msa1036360:CDS
ACGTTAACGGGACATAGTTT+AGG 0.282591 7_1:+72709234 Msa1036360:CDS
GATATGAAGCAACCACTAAA+AGG 0.291341 7_1:+72711572 Msa1036360:CDS
CGTTAACGGGACATAGTTTA+GGG 0.299251 7_1:+72709235 Msa1036360:CDS
CAGAAACACGGTTAAATGTT+AGG 0.300124 7_1:+72709292 Msa1036360:CDS
ATTGGAGCGAACACGCAAAT+TGG 0.300439 7_1:+72708671 Msa1036360:CDS
ATGAAGAGATGAGTCCTATC+TGG 0.311376 7_1:-72711771 None:intergenic
CTCGATGGCCAGATAAATAT+TGG 0.316448 7_1:+72708653 Msa1036360:CDS
GGAGATTGGAGAAACATTTA+GGG 0.327887 7_1:+72709388 Msa1036360:CDS
GGGTTATTGGTTGTGTTGTT+TGG 0.337415 7_1:-72708243 None:intergenic
GTAATACTAACTTCTTCATT+AGG 0.342805 7_1:-72709213 None:intergenic
CGTGAAATTTAAAGGGAGAT+TGG 0.344597 7_1:+72709374 Msa1036360:CDS
GCAAGATTTGAATAGGAATA+TGG 0.354087 7_1:+72711663 Msa1036360:CDS
AGCACTCTGTGCCACCAAAT+TGG 0.358258 7_1:+72711638 Msa1036360:CDS
GAAGTTAGTATTACGTTAAC+GGG 0.360874 7_1:+72709222 Msa1036360:CDS
TTGTGTGATGGTGTTGGATT+GGG 0.361021 7_1:-72708302 None:intergenic
TCCGAATCCACTTTCTTCTT+CGG 0.363413 7_1:+72708196 Msa1036360:CDS
TGTTCGCTCCAATATTTATC+TGG 0.373590 7_1:-72708661 None:intergenic
ATTGGAGGCAAGATTTGAAT+AGG 0.374370 7_1:+72711656 Msa1036360:CDS
GAAGAAAGTGGATTCGGATC+TGG 0.377567 7_1:-72708191 None:intergenic
AAAATCAAATGCATCATAAC+AGG 0.381110 7_1:-72708485 None:intergenic
GATCGCATTATTGGATCCAT+TGG 0.395016 7_1:-72708430 None:intergenic
CGATCTGAACTAATCCGTTA+TGG 0.401938 7_1:+72708448 Msa1036360:CDS
AAATGCACGGTGAAGATGAT+TGG 0.402324 7_1:+72708392 Msa1036360:CDS
AAGCTAGTTGATTGAATGAA+TGG 0.402880 7_1:+72711809 Msa1036360:three_prime_UTR
GCAGATGCAGCATCAGCATT+AGG 0.409371 7_1:-72709591 None:intergenic
GTTGTGTGATGGTGTTGGAT+TGG 0.409411 7_1:-72708303 None:intergenic
ATAAGAAACCCTGGTGACTT+TGG 0.419814 7_1:-72709450 None:intergenic
CACTAAAAGGGACATTGCTT+TGG 0.430429 7_1:+72711585 Msa1036360:CDS
TGCTGCATCTGCTCATAACT+TGG 0.432225 7_1:+72709602 Msa1036360:CDS
GGTTCATAATAAGCATGATA+TGG 0.439973 7_1:+72709425 Msa1036360:CDS
AGAAACACGGTTAAATGTTA+GGG 0.446331 7_1:+72709293 Msa1036360:CDS
GATGGTGTTGGATTGGGTTG+TGG 0.449723 7_1:-72708296 None:intergenic
TTGGAGTTGTGTGATGGTGT+TGG 0.450815 7_1:-72708308 None:intergenic
GAATTTGAGGTGGTTGGAGT+TGG 0.451070 7_1:-72708221 None:intergenic
AGAAGTTAGTATTACGTTAA+CGG 0.458390 7_1:+72709221 Msa1036360:CDS
TTGGGAACGTGAAATTTAAA+GGG 0.459427 7_1:+72709367 Msa1036360:CDS
TCCGAAGAAGAAAGTGGATT+CGG 0.461681 7_1:-72708197 None:intergenic
AAGAAAGTGGATTCGGATCT+GGG 0.462189 7_1:-72708190 None:intergenic
AGTAAGAATGAAGATGGAGT+TGG 0.469367 7_1:-72708126 None:intergenic
CAAATGCATCATAACAGGCT+TGG 0.470701 7_1:-72708480 None:intergenic
GAGCCTTATCTCTCCCAGAT+AGG 0.471370 7_1:+72711757 Msa1036360:CDS
TCTACTCGAACATCGTTGTC+TGG 0.471524 7_1:-72709081 None:intergenic
GTTGTGTTGTTTGGAATTTG+AGG 0.472244 7_1:-72708234 None:intergenic
TGTTGTTTCATCGTTTGAAA+CGG 0.473023 7_1:-72708707 None:intergenic
CATATCCACGGTTGCTCCCA+TGG 0.475119 7_1:-72711555 None:intergenic
CGAAGATGGACGTTGGGTGC+TGG 0.476306 7_1:+72711693 Msa1036360:CDS
TACTGAACTACCAATCGAAA+AGG 0.478400 7_1:+72708360 Msa1036360:CDS
AAATGCATCATAACAGGCTT+GGG 0.481652 7_1:-72708479 None:intergenic
TGTTTGGAATTTGAGGTGGT+TGG 0.484186 7_1:-72708227 None:intergenic
CAGCACCCAACGTCCATCTT+CGG 0.497295 7_1:-72711692 None:intergenic
AAATCTTGCCTCCAATTTGG+TGG 0.500957 7_1:-72711649 None:intergenic
CGTTAGATCTTCCACACATA+GGG 0.505096 7_1:+72708566 Msa1036360:CDS
GAGATTTCTTAAAGAAATCT+GGG 0.505416 7_1:-72708633 None:intergenic
GATGAAACAACAAAACAGAT+AGG 0.505936 7_1:+72708718 Msa1036360:CDS
TAGTATAGCATAATCAGCTT+CGG 0.509491 7_1:-72711906 None:intergenic
TACTGTGACTCATGTTGAAT+GGG 0.514995 7_1:+72709008 Msa1036360:CDS
GTAGAGACGTCGTCGTTGCT+TGG 0.515529 7_1:+72708980 Msa1036360:CDS
TTGGATCCATTGGATCCAAA+AGG 0.515757 7_1:-72708420 None:intergenic
GAGCGAACACGCAAATTGGA+TGG 0.516239 7_1:+72708675 Msa1036360:CDS
GATATGGTGCCAAAGTCACC+AGG 0.523665 7_1:+72709441 Msa1036360:CDS
TGTTGGAGTTGAGTTAGAGT+TGG 0.525724 7_1:+72709542 Msa1036360:CDS
TTGTGATTGGAGTTGTGTGA+TGG 0.526790 7_1:-72708314 None:intergenic
TAGTGGTTGCTTCATATCCA+CGG 0.527117 7_1:-72711567 None:intergenic
TGTTAGAGTAAGAATGAAGA+TGG 0.528850 7_1:-72708132 None:intergenic
TGCATCTGCTCATAACTTGG+AGG 0.533002 7_1:+72709605 Msa1036360:CDS
AATATGGTGAAGACCGAAGA+TGG 0.533831 7_1:+72711679 Msa1036360:CDS
AACGATGTTCGAGTAGAAGC+AGG 0.537151 7_1:+72709087 Msa1036360:CDS
AATGCACGGTGAAGATGATT+GGG 0.537535 7_1:+72708393 Msa1036360:CDS
TCTTCCACACATAGGGTATG+AGG 0.540850 7_1:+72708573 Msa1036360:CDS
GATGAGTATCTGCAAGTTGT+GGG 0.543513 7_1:-72711723 None:intergenic
CTGAGGATATTGATATTCCA+TGG 0.547347 7_1:+72709508 Msa1036360:CDS
ATATGAAGCAACCACTAAAA+GGG 0.548654 7_1:+72711573 Msa1036360:CDS
AATTTCACGTTCCCAACCCT+AGG 0.553515 7_1:-72709360 None:intergenic
TCGTTAGATCTTCCACACAT+AGG 0.560088 7_1:+72708565 Msa1036360:CDS
TGATGATGAGCAGGTACCAT+GGG 0.560215 7_1:+72711539 Msa1036360:intron
AGTCCTATCTGGGAGAGATA+AGG 0.560550 7_1:-72711760 None:intergenic
ACTCTGTGCCACCAAATTGG+AGG 0.560687 7_1:+72711641 Msa1036360:CDS
GATCCATATTCAAAATATTG+TGG 0.563766 7_1:+72708508 Msa1036360:CDS
TCTTCATTCTTACTCTAACA+TGG 0.564637 7_1:+72708135 Msa1036360:exon
ACCCATCGAGTATGTGCAAG+TGG 0.565551 7_1:-72709629 None:intergenic
GCCCACTTGCACATACTCGA+TGG 0.566632 7_1:+72709627 Msa1036360:CDS
CGAACATCGTTGTCTGGACA+AGG 0.568633 7_1:-72709075 None:intergenic
CCATGGTGTTACACTCATGT+TGG 0.572004 7_1:+72709525 Msa1036360:CDS
GAAGACCGAAGATGGACGTT+GGG 0.573919 7_1:+72711687 Msa1036360:CDS
GTACTGTGACTCATGTTGAA+TGG 0.574716 7_1:+72709007 Msa1036360:CDS
GTTGGATCCGAAGAAGAAAG+TGG 0.577003 7_1:-72708203 None:intergenic
TTCTCATTAATAAGAAACCC+TGG 0.577571 7_1:-72709459 None:intergenic
TGAAGAGATGAGTCCTATCT+GGG 0.580441 7_1:-72711770 None:intergenic
GTGTTGTTTGGAATTTGAGG+TGG 0.580769 7_1:-72708231 None:intergenic
AGCGAACACGCAAATTGGAT+GGG 0.585489 7_1:+72708676 Msa1036360:CDS
TGATGAGTATCTGCAAGTTG+TGG 0.587655 7_1:-72711724 None:intergenic
AGTGGATTCGGATCTGGGAA+AGG 0.587954 7_1:-72708185 None:intergenic
AAGGCATGGCGCAAAATGCA+CGG 0.592136 7_1:+72708379 Msa1036360:CDS
ACCGATAGACAAACAAAAGA+CGG 0.593031 7_1:+72709126 Msa1036360:CDS
TGATAATGATATATATAGAG+TGG 0.593271 7_1:+72711847 Msa1036360:three_prime_UTR
CTTGGGACATCTCTCCATAA+CGG 0.598290 7_1:-72708462 None:intergenic
GACGTCGTCGTTGCTTGGCG+AGG 0.598300 7_1:+72708985 Msa1036360:CDS
GTGGTTATTAAAGTTTGCTG+AGG 0.600416 7_1:+72709491 Msa1036360:CDS
AACTACCAATCGAAAAGGCA+TGG 0.602251 7_1:+72708365 Msa1036360:CDS
ATCATTATCAGTTTATCACA+TGG 0.602995 7_1:-72711834 None:intergenic
ACATAGTTTAGGGAGTGCTA+TGG 0.614629 7_1:+72709245 Msa1036360:CDS
TGTGTGGAAGATCTAACGAT+GGG 0.619407 7_1:-72708561 None:intergenic
CCCACTTGCACATACTCGAT+GGG 0.620876 7_1:+72709628 Msa1036360:CDS
TTGATGATGAGCAGGTACCA+TGG 0.623853 7_1:+72711538 Msa1036360:intron
GTCACCTCATACCCTATGTG+TGG 0.625530 7_1:-72708577 None:intergenic
TAACATTTGCTGTGGCGTAG+AGG 0.633479 7_1:-72708606 None:intergenic
TGGGACGTTAACATTTGCTG+TGG 0.637969 7_1:-72708614 None:intergenic
TGTCTGGACAAGGAATGTCT+TGG 0.642553 7_1:-72709065 None:intergenic
CGTTTGATATAGCAGAAACA+CGG 0.643367 7_1:+72709280 Msa1036360:CDS
CACGGTGAAGATGATTGGGT+TGG 0.646416 7_1:+72708397 Msa1036360:CDS
AGGTACCATGGGAGCAACCG+TGG 0.651704 7_1:+72711550 Msa1036360:intron
GAGATTGGAGAAACATTTAG+GGG 0.658549 7_1:+72709389 Msa1036360:CDS
ATTTCTTTAAGAAATCTCGA+TGG 0.659322 7_1:+72708638 Msa1036360:CDS
CCCATCGAGTATGTGCAAGT+GGG 0.660658 7_1:-72709628 None:intergenic
TTAATGAGAAATCGCCTGAG+TGG 0.664008 7_1:+72709472 Msa1036360:CDS
GCAAACTTTAATAACCACTC+AGG 0.666053 7_1:-72709486 None:intergenic
CCAACATGAGTGTAACACCA+TGG 0.679476 7_1:-72709525 None:intergenic
ATGTGTGGAAGATCTAACGA+TGG 0.689828 7_1:-72708562 None:intergenic
TGAAGACCGAAGATGGACGT+TGG 0.699979 7_1:+72711686 Msa1036360:CDS
ATATGGTGCCAAAGTCACCA+GGG 0.760395 7_1:+72709442 Msa1036360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCAAATATAAGAAATAAT+TGG + chr7_1:72708793-72708812 Msa1036360:intron 10.0%
!! ATACAGATTAAATAAAATAT+AGG - chr7_1:72710722-72710741 None:intergenic 10.0%
!!! TTATTTCTTATATTTGATAG+TGG - chr7_1:72708792-72708811 None:intergenic 15.0%
!! TATAAAGTATACAAAGAAAT+TGG - chr7_1:72708878-72708897 None:intergenic 15.0%
!! TTTCTTTGTATACTTTATAT+AGG + chr7_1:72708879-72708898 Msa1036360:intron 15.0%
!!! TTTAAGAAAATTTTGAAGAT+TGG - chr7_1:72709037-72709056 None:intergenic 15.0%
!! AAATAAAAAAATATTAAGGG+AGG + chr7_1:72709924-72709943 Msa1036360:intron 15.0%
!! AGTATATTACAGTAATTAAT+TGG - chr7_1:72709970-72709989 None:intergenic 15.0%
!!! TTATTTTTCGGAAAATATTT+GGG - chr7_1:72710330-72710349 None:intergenic 15.0%
!!! ATTATTTTTCGGAAAATATT+TGG - chr7_1:72710331-72710350 None:intergenic 15.0%
!! AAATATACCTTATATTCATA+GGG - chr7_1:72710390-72710409 None:intergenic 15.0%
!! AAAATATACCTTATATTCAT+AGG - chr7_1:72710391-72710410 None:intergenic 15.0%
!!! TTTTTGTGATTTAATATCTA+AGG - chr7_1:72710672-72710691 None:intergenic 15.0%
!! ATTTCAGTTTATTAAATAAC+TGG - chr7_1:72710797-72710816 None:intergenic 15.0%
!!! ATTTATTAAATAGGTCTTAT+TGG - chr7_1:72711148-72711167 None:intergenic 15.0%
!! CTCATGAAAATTTATTAAAT+AGG - chr7_1:72711157-72711176 None:intergenic 15.0%
!!! CTATTTAATAAATTTTCATG+AGG + chr7_1:72711155-72711174 Msa1036360:intron 15.0%
!! ATTAGATACTTATTAGATAT+TGG + chr7_1:72711193-72711212 Msa1036360:intron 15.0%
!! GGTATTAAAAACTATAAAAT+AGG + chr7_1:72711214-72711233 Msa1036360:intron 15.0%
!!! TATTTGAGTTTAAGTTTGTT+CGG + chr7_1:72710002-72710021 Msa1036360:intron 20.0%
!!! TTCAAAGTCAATTTTTGTTA+AGG - chr7_1:72710033-72710052 None:intergenic 20.0%
!!! GATGCTCATATATTATTTTT+CGG - chr7_1:72710342-72710361 None:intergenic 20.0%
!!! AACGATCGATAAATTTTTTT+AGG - chr7_1:72710534-72710553 None:intergenic 20.0%
!! ATTATGTTATAGAAAGAACA+TGG + chr7_1:72710880-72710899 Msa1036360:intron 20.0%
!! ACTCATTTAAATGTTTAAGT+GGG - chr7_1:72711258-72711277 None:intergenic 20.0%
!!! TACTGTTAACTATTTTTGAA+TGG + chr7_1:72711473-72711492 Msa1036360:intron 20.0%
!!! TGATAATGATATATATAGAG+TGG + chr7_1:72711847-72711866 Msa1036360:three_prime_UTR 20.0%
!!! TTTTTTGTTGTTAGGGTTAT+TGG - chr7_1:72708259-72708278 None:intergenic 25.0%
!!! AGTTTTGATGATTGTTTTGT+GGG - chr7_1:72708340-72708359 None:intergenic 25.0%
!!! AAGTTTTGATGATTGTTTTG+TGG - chr7_1:72708341-72708360 None:intergenic 25.0%
! AAAATCAAATGCATCATAAC+AGG - chr7_1:72708488-72708507 None:intergenic 25.0%
! GATCCATATTCAAAATATTG+TGG + chr7_1:72708508-72708527 Msa1036360:CDS 25.0%
!!! CTACCACAATATTTTGAATA+TGG - chr7_1:72708514-72708533 None:intergenic 25.0%
! GAGATTTCTTAAAGAAATCT+GGG - chr7_1:72708636-72708655 None:intergenic 25.0%
!! ATTTCTTTAAGAAATCTCGA+TGG + chr7_1:72708638-72708657 Msa1036360:CDS 25.0%
!!! GTTTCCAAAATATTTTTGAG+TGG + chr7_1:72708754-72708773 Msa1036360:intron 25.0%
!! ACATCCACTCAAAAATATTT+TGG - chr7_1:72708761-72708780 None:intergenic 25.0%
!!! TTCTTATATTTGATAGTGGA+GGG - chr7_1:72708788-72708807 None:intergenic 25.0%
!!! TTTCTTATATTTGATAGTGG+AGG - chr7_1:72708789-72708808 None:intergenic 25.0%
!! GCATATAGTAGTTCAAATTT+TGG - chr7_1:72708843-72708862 None:intergenic 25.0%
! GTAATACTAACTTCTTCATT+AGG - chr7_1:72709216-72709235 None:intergenic 25.0%
! AGAAGTTAGTATTACGTTAA+CGG + chr7_1:72709221-72709240 Msa1036360:CDS 25.0%
!! GTTTCAGTATTTTCATTTTC+TGG + chr7_1:72709336-72709355 Msa1036360:CDS 25.0%
!! TAGTTTCTTTGATTGATGAT+AGG + chr7_1:72709708-72709727 Msa1036360:intron 25.0%
! ATCATACATATGCATATCAA+TGG + chr7_1:72709808-72709827 Msa1036360:intron 25.0%
!!! ACGTATATCTTTTTTAGTCA+TGG - chr7_1:72709843-72709862 None:intergenic 25.0%
! TAAAAAAATATTAAGGGAGG+AGG + chr7_1:72709927-72709946 Msa1036360:intron 25.0%
! ACTCCAAATCAATTAGAAAT+TGG + chr7_1:72710162-72710181 Msa1036360:intron 25.0%
! CTCCAAATCAATTAGAAATT+GGG + chr7_1:72710163-72710182 Msa1036360:intron 25.0%
! AACCCAATTTCTAATTGATT+TGG - chr7_1:72710168-72710187 None:intergenic 25.0%
! TTAACAACCCTATGAATATA+AGG + chr7_1:72710380-72710399 Msa1036360:intron 25.0%
! GGTATTGTCATAAAAGTAAA+AGG - chr7_1:72710445-72710464 None:intergenic 25.0%
! TGTGATTTAATATCTAAGGA+CGG - chr7_1:72710668-72710687 None:intergenic 25.0%
! AAATTTAATTACTGCGTACT+AGG + chr7_1:72710813-72710832 Msa1036360:intron 25.0%
! TAATTCAGATGTGTTTATAG+AGG + chr7_1:72710983-72711002 Msa1036360:intron 25.0%
! TATGAAAAAGTGAAAAGAGA+GGG - chr7_1:72711027-72711046 None:intergenic 25.0%
! TTATGAAAAAGTGAAAAGAG+AGG - chr7_1:72711028-72711047 None:intergenic 25.0%
! CACTCATTTAAATGTTTAAG+TGG - chr7_1:72711259-72711278 None:intergenic 25.0%
! AAACCATATTTCGTATGAAT+TGG - chr7_1:72711382-72711401 None:intergenic 25.0%
! TACGAAATATGGTTTATGAT+TGG + chr7_1:72711387-72711406 Msa1036360:intron 25.0%
! ATCATTATCAGTTTATCACA+TGG - chr7_1:72711837-72711856 None:intergenic 25.0%
!! TGGTAACATACTGTAATTTT+TGG + chr7_1:72711867-72711886 Msa1036360:three_prime_UTR 25.0%
TGTTAGAGTAAGAATGAAGA+TGG - chr7_1:72708135-72708154 None:intergenic 30.0%
TCTTCATTCTTACTCTAACA+TGG + chr7_1:72708135-72708154 Msa1036360:exon 30.0%
!!! GGTGAGTTTTTTTGTTGTTA+GGG - chr7_1:72708266-72708285 None:intergenic 30.0%
!!! TGGTGAGTTTTTTTGTTGTT+AGG - chr7_1:72708267-72708286 None:intergenic 30.0%
ATTAGTTCAGATCGCATTAT+TGG - chr7_1:72708442-72708461 None:intergenic 30.0%
CGAGATTTCTTAAAGAAATC+TGG - chr7_1:72708637-72708656 None:intergenic 30.0%
!! TGTTGTTTCATCGTTTGAAA+CGG - chr7_1:72708710-72708729 None:intergenic 30.0%
GATGAAACAACAAAACAGAT+AGG + chr7_1:72708718-72708737 Msa1036360:CDS 30.0%
TCCAAACATAAACATCGTTA+GGG - chr7_1:72708950-72708969 None:intergenic 30.0%
TTCCAAACATAAACATCGTT+AGG - chr7_1:72708951-72708970 None:intergenic 30.0%
! ATGTTTATGTTTGGAACTAC+AGG + chr7_1:72708955-72708974 Msa1036360:intron 30.0%
!!! AAGTTTTAGGAGAAGTGAAA+AGG + chr7_1:72709175-72709194 Msa1036360:CDS 30.0%
GAAGTTAGTATTACGTTAAC+GGG + chr7_1:72709222-72709241 Msa1036360:CDS 30.0%
AGAAACACGGTTAAATGTTA+GGG + chr7_1:72709293-72709312 Msa1036360:CDS 30.0%
! TATTTTCATTTTCTGGACCT+AGG + chr7_1:72709343-72709362 Msa1036360:CDS 30.0%
! ATTTTCATTTTCTGGACCTA+GGG + chr7_1:72709344-72709363 Msa1036360:CDS 30.0%
TTGGGAACGTGAAATTTAAA+GGG + chr7_1:72709367-72709386 Msa1036360:CDS 30.0%
! ATTTAGGGGTTAAGATTTTG+AGG + chr7_1:72709403-72709422 Msa1036360:CDS 30.0%
! TTTAGGGGTTAAGATTTTGA+GGG + chr7_1:72709404-72709423 Msa1036360:CDS 30.0%
GGTTCATAATAAGCATGATA+TGG + chr7_1:72709425-72709444 Msa1036360:CDS 30.0%
TTCTCATTAATAAGAAACCC+TGG - chr7_1:72709462-72709481 None:intergenic 30.0%
TCAAAAATGGAGAAATCTTG+TGG - chr7_1:72709569-72709588 None:intergenic 30.0%
TCAGCATTAGGATTCAAAAA+TGG - chr7_1:72709582-72709601 None:intergenic 30.0%
!! TTTCTAATTGATTTGGAGTG+AGG - chr7_1:72710161-72710180 None:intergenic 30.0%
TGACAATACCCTATATTCAT+AGG + chr7_1:72710455-72710474 Msa1036360:intron 30.0%
GACAATACCCTATATTCATA+GGG + chr7_1:72710456-72710475 Msa1036360:intron 30.0%
TTGACAACCCTATGAATATA+GGG - chr7_1:72710466-72710485 None:intergenic 30.0%
TTTGACAACCCTATGAATAT+AGG - chr7_1:72710467-72710486 None:intergenic 30.0%
! TTAAAGTGTCTAATTGGTCA+TGG - chr7_1:72710586-72710605 None:intergenic 30.0%
!! ATTCTCTAGAGTGGATAATT+CGG + chr7_1:72710942-72710961 Msa1036360:intron 30.0%
!! CATATGCCTATCTTTTTCAT+TGG + chr7_1:72711318-72711337 Msa1036360:intron 30.0%
!! CCTATCTTTTTCATTGGTAT+GGG + chr7_1:72711324-72711343 Msa1036360:intron 30.0%
CATATTTCGTATGAATTGGT+TGG - chr7_1:72711378-72711397 None:intergenic 30.0%
CAACCAATTCATACGAAATA+TGG + chr7_1:72711376-72711395 Msa1036360:intron 30.0%
! TATGGTTTATGATTGGTTGA+CGG + chr7_1:72711394-72711413 Msa1036360:intron 30.0%
ATATGAAGCAACCACTAAAA+GGG + chr7_1:72711573-72711592 Msa1036360:CDS 30.0%
GCAAGATTTGAATAGGAATA+TGG + chr7_1:72711663-72711682 Msa1036360:CDS 30.0%
AAGCTAGTTGATTGAATGAA+TGG + chr7_1:72711809-72711828 Msa1036360:three_prime_UTR 30.0%
TAGTATAGCATAATCAGCTT+CGG - chr7_1:72711909-72711928 None:intergenic 30.0%
AGTAAGAATGAAGATGGAGT+TGG - chr7_1:72708129-72708148 None:intergenic 35.0%
!! GTTGTGTTGTTTGGAATTTG+AGG - chr7_1:72708237-72708256 None:intergenic 35.0%
!! ATTGTTTTGTGGGTTGTGAT+TGG - chr7_1:72708330-72708349 None:intergenic 35.0%
TACTGAACTACCAATCGAAA+AGG + chr7_1:72708360-72708379 Msa1036360:CDS 35.0%
AAATGCATCATAACAGGCTT+GGG - chr7_1:72708482-72708501 None:intergenic 35.0%
ATGGGAAAAATTCAAGGTGT+GGG - chr7_1:72708546-72708565 None:intergenic 35.0%
CTAACGATGGGAAAAATTCA+AGG - chr7_1:72708552-72708571 None:intergenic 35.0%
TGTTCGCTCCAATATTTATC+TGG - chr7_1:72708664-72708683 None:intergenic 35.0%
TCCCTAACGATGTTTATGTT+TGG + chr7_1:72708946-72708965 Msa1036360:intron 35.0%
TACTGTGACTCATGTTGAAT+GGG + chr7_1:72709008-72709027 Msa1036360:CDS 35.0%
CAAGGAATGTCTTGGTAAAT+AGG - chr7_1:72709060-72709079 None:intergenic 35.0%
ACCGATAGACAAACAAAAGA+CGG + chr7_1:72709126-72709145 Msa1036360:CDS 35.0%
!! ACCGTCTTTTGTTTGTCTAT+CGG - chr7_1:72709130-72709149 None:intergenic 35.0%
! TCTGCTAGAGAACAAGTTTT+AGG + chr7_1:72709162-72709181 Msa1036360:CDS 35.0%
CGTTTGATATAGCAGAAACA+CGG + chr7_1:72709280-72709299 Msa1036360:CDS 35.0%
CAGAAACACGGTTAAATGTT+AGG + chr7_1:72709292-72709311 Msa1036360:CDS 35.0%
CGGTTAAATGTTAGGGAAAA+TGG + chr7_1:72709300-72709319 Msa1036360:CDS 35.0%
GTTGGGAACGTGAAATTTAA+AGG + chr7_1:72709366-72709385 Msa1036360:CDS 35.0%
CGTGAAATTTAAAGGGAGAT+TGG + chr7_1:72709374-72709393 Msa1036360:CDS 35.0%
GGAGATTGGAGAAACATTTA+GGG + chr7_1:72709388-72709407 Msa1036360:CDS 35.0%
GAGATTGGAGAAACATTTAG+GGG + chr7_1:72709389-72709408 Msa1036360:CDS 35.0%
GCAAACTTTAATAACCACTC+AGG - chr7_1:72709489-72709508 None:intergenic 35.0%
!! GTGGTTATTAAAGTTTGCTG+AGG + chr7_1:72709491-72709510 Msa1036360:CDS 35.0%
CTGAGGATATTGATATTCCA+TGG + chr7_1:72709508-72709527 Msa1036360:CDS 35.0%
! TGCGTGTTAAAGTGTCTAAT+TGG - chr7_1:72710592-72710611 None:intergenic 35.0%
! AATAGACACATTCTCTAGAG+TGG + chr7_1:72710933-72710952 Msa1036360:intron 35.0%
TAGAGGATGACACCTTTAAA+AGG + chr7_1:72711000-72711019 Msa1036360:intron 35.0%
! AAAAGAGAGGGTCCTTTTAA+AGG - chr7_1:72711015-72711034 None:intergenic 35.0%
!! GCCTATCTTTTTCATTGGTA+TGG + chr7_1:72711323-72711342 Msa1036360:intron 35.0%
CCCATACCAATGAAAAAGAT+AGG - chr7_1:72711327-72711346 None:intergenic 35.0%
!! ATCTTTTTCATTGGTATGGG+CGG + chr7_1:72711327-72711346 Msa1036360:intron 35.0%
!! GTATAACTTTGATGATGAGC+AGG + chr7_1:72711530-72711549 Msa1036360:intron 35.0%
GATATGAAGCAACCACTAAA+AGG + chr7_1:72711572-72711591 Msa1036360:CDS 35.0%
TTCAAATCTTGCCTCCAATT+TGG - chr7_1:72711655-72711674 None:intergenic 35.0%
ATTGGAGGCAAGATTTGAAT+AGG + chr7_1:72711656-72711675 Msa1036360:CDS 35.0%
! AAGAAAGTGGATTCGGATCT+GGG - chr7_1:72708193-72708212 None:intergenic 40.0%
TCCGAATCCACTTTCTTCTT+CGG + chr7_1:72708196-72708215 Msa1036360:CDS 40.0%
! TCCGAAGAAGAAAGTGGATT+CGG - chr7_1:72708200-72708219 None:intergenic 40.0%
! TGTTTGGAATTTGAGGTGGT+TGG - chr7_1:72708230-72708249 None:intergenic 40.0%
!! GTGTTGTTTGGAATTTGAGG+TGG - chr7_1:72708234-72708253 None:intergenic 40.0%
! GGGTTATTGGTTGTGTTGTT+TGG - chr7_1:72708246-72708265 None:intergenic 40.0%
! TTGTGTGATGGTGTTGGATT+GGG - chr7_1:72708305-72708324 None:intergenic 40.0%
TTGTGATTGGAGTTGTGTGA+TGG - chr7_1:72708317-72708336 None:intergenic 40.0%
AACTACCAATCGAAAAGGCA+TGG + chr7_1:72708365-72708384 Msa1036360:CDS 40.0%
AAATGCACGGTGAAGATGAT+TGG + chr7_1:72708392-72708411 Msa1036360:CDS 40.0%
AATGCACGGTGAAGATGATT+GGG + chr7_1:72708393-72708412 Msa1036360:CDS 40.0%
TTGGATCCATTGGATCCAAA+AGG - chr7_1:72708423-72708442 None:intergenic 40.0%
GATCGCATTATTGGATCCAT+TGG - chr7_1:72708433-72708452 None:intergenic 40.0%
CGATCTGAACTAATCCGTTA+TGG + chr7_1:72708448-72708467 Msa1036360:CDS 40.0%
CAAATGCATCATAACAGGCT+TGG - chr7_1:72708483-72708502 None:intergenic 40.0%
GATGGGAAAAATTCAAGGTG+TGG - chr7_1:72708547-72708566 None:intergenic 40.0%
TGTGTGGAAGATCTAACGAT+GGG - chr7_1:72708564-72708583 None:intergenic 40.0%
ATGTGTGGAAGATCTAACGA+TGG - chr7_1:72708565-72708584 None:intergenic 40.0%
TCGTTAGATCTTCCACACAT+AGG + chr7_1:72708565-72708584 Msa1036360:CDS 40.0%
CGTTAGATCTTCCACACATA+GGG + chr7_1:72708566-72708585 Msa1036360:CDS 40.0%
CTCGATGGCCAGATAAATAT+TGG + chr7_1:72708653-72708672 Msa1036360:CDS 40.0%
CAACAAAACAGATAGGTGTG+TGG + chr7_1:72708725-72708744 Msa1036360:intron 40.0%
GTACTGTGACTCATGTTGAA+TGG + chr7_1:72709007-72709026 Msa1036360:CDS 40.0%
ACGTTAACGGGACATAGTTT+AGG + chr7_1:72709234-72709253 Msa1036360:CDS 40.0%
CGTTAACGGGACATAGTTTA+GGG + chr7_1:72709235-72709254 Msa1036360:CDS 40.0%
!! ACATAGTTTAGGGAGTGCTA+TGG + chr7_1:72709245-72709264 Msa1036360:CDS 40.0%
GGGAGATTGGAGAAACATTT+AGG + chr7_1:72709387-72709406 Msa1036360:CDS 40.0%
ATAAGAAACCCTGGTGACTT+TGG - chr7_1:72709453-72709472 None:intergenic 40.0%
TTAATGAGAAATCGCCTGAG+TGG + chr7_1:72709472-72709491 Msa1036360:CDS 40.0%
TGTTGGAGTTGAGTTAGAGT+TGG + chr7_1:72709542-72709561 Msa1036360:CDS 40.0%
AGATGCACATGCAAAATACG+TGG - chr7_1:72709687-72709706 None:intergenic 40.0%
ATTAAGGGAGGAGGTAACAT+TGG + chr7_1:72709936-72709955 Msa1036360:intron 40.0%
! GGAGTGAGGATTTGCATTTT+TGG - chr7_1:72710147-72710166 None:intergenic 40.0%
AACACGCAACAATGATCTTC+AGG + chr7_1:72710604-72710623 Msa1036360:intron 40.0%
TGATCTTCAGGACTAGAAAG+AGG + chr7_1:72710616-72710635 Msa1036360:intron 40.0%
GGATAATTCGGATGTCTTTG+TGG + chr7_1:72710954-72710973 Msa1036360:intron 40.0%
!!! ATTTTCATGAGGTGTCGAGT+TGG + chr7_1:72711166-72711185 Msa1036360:intron 40.0%
TTAAATGAGTGCGCTCTATG+CGG + chr7_1:72711268-72711287 Msa1036360:intron 40.0%
TAGTGGTTGCTTCATATCCA+CGG - chr7_1:72711570-72711589 None:intergenic 40.0%
! CAAAGCAATGTCCCTTTTAG+TGG - chr7_1:72711587-72711606 None:intergenic 40.0%
CACTAAAAGGGACATTGCTT+TGG + chr7_1:72711585-72711604 Msa1036360:CDS 40.0%
GGACATTGCTTTGGTGAATA+AGG + chr7_1:72711594-72711613 Msa1036360:CDS 40.0%
AAATCTTGCCTCCAATTTGG+TGG - chr7_1:72711652-72711671 None:intergenic 40.0%
AATATGGTGAAGACCGAAGA+TGG + chr7_1:72711679-72711698 Msa1036360:CDS 40.0%
GATGAGTATCTGCAAGTTGT+GGG - chr7_1:72711726-72711745 None:intergenic 40.0%
TGATGAGTATCTGCAAGTTG+TGG - chr7_1:72711727-72711746 None:intergenic 40.0%
TGAAGAGATGAGTCCTATCT+GGG - chr7_1:72711773-72711792 None:intergenic 40.0%
ATGAAGAGATGAGTCCTATC+TGG - chr7_1:72711774-72711793 None:intergenic 40.0%
! GAAGAAAGTGGATTCGGATC+TGG - chr7_1:72708194-72708213 None:intergenic 45.0%
GTTGGATCCGAAGAAGAAAG+TGG - chr7_1:72708206-72708225 None:intergenic 45.0%
! GAATTTGAGGTGGTTGGAGT+TGG - chr7_1:72708224-72708243 None:intergenic 45.0%
!! TTGGGTTGTGGTGCATTTTG+TGG - chr7_1:72708287-72708306 None:intergenic 45.0%
! GTTGTGTGATGGTGTTGGAT+TGG - chr7_1:72708306-72708325 None:intergenic 45.0%
! TTGGAGTTGTGTGATGGTGT+TGG - chr7_1:72708311-72708330 None:intergenic 45.0%
!!! AGATGATTGGGTTGGCCTTT+TGG + chr7_1:72708405-72708424 Msa1036360:CDS 45.0%
CTTGGGACATCTCTCCATAA+CGG - chr7_1:72708465-72708484 None:intergenic 45.0%
TCTTCCACACATAGGGTATG+AGG + chr7_1:72708573-72708592 Msa1036360:CDS 45.0%
!! TAACATTTGCTGTGGCGTAG+AGG - chr7_1:72708609-72708628 None:intergenic 45.0%
! TGGGACGTTAACATTTGCTG+TGG - chr7_1:72708617-72708636 None:intergenic 45.0%
ATTGGAGCGAACACGCAAAT+TGG + chr7_1:72708671-72708690 Msa1036360:CDS 45.0%
AGCGAACACGCAAATTGGAT+GGG + chr7_1:72708676-72708695 Msa1036360:CDS 45.0%
TGTCTGGACAAGGAATGTCT+TGG - chr7_1:72709068-72709087 None:intergenic 45.0%
TCTACTCGAACATCGTTGTC+TGG - chr7_1:72709084-72709103 None:intergenic 45.0%
AACGATGTTCGAGTAGAAGC+AGG + chr7_1:72709087-72709106 Msa1036360:CDS 45.0%
! TCATTTTCTGGACCTAGGGT+TGG + chr7_1:72709348-72709367 Msa1036360:CDS 45.0%
! CATTTTCTGGACCTAGGGTT+GGG + chr7_1:72709349-72709368 Msa1036360:CDS 45.0%
AATTTCACGTTCCCAACCCT+AGG - chr7_1:72709363-72709382 None:intergenic 45.0%
! ATATGGTGCCAAAGTCACCA+GGG + chr7_1:72709442-72709461 Msa1036360:CDS 45.0%
CCAACATGAGTGTAACACCA+TGG - chr7_1:72709528-72709547 None:intergenic 45.0%
!! CCATGGTGTTACACTCATGT+TGG + chr7_1:72709525-72709544 Msa1036360:CDS 45.0%
TGCTGCATCTGCTCATAACT+TGG + chr7_1:72709602-72709621 Msa1036360:CDS 45.0%
TGCATCTGCTCATAACTTGG+AGG + chr7_1:72709605-72709624 Msa1036360:CDS 45.0%
GCACATGCAAAATACGTGGT+TGG - chr7_1:72709683-72709702 None:intergenic 45.0%
CGATCGTTATCTATCGTGTC+CGG + chr7_1:72710546-72710565 Msa1036360:intron 45.0%
GATCGTTATCTATCGTGTCC+GGG + chr7_1:72710547-72710566 Msa1036360:intron 45.0%
ATCGTTATCTATCGTGTCCG+GGG + chr7_1:72710548-72710567 Msa1036360:intron 45.0%
ACTAGAAAGAGGTCCCCTTA+CGG + chr7_1:72710627-72710646 Msa1036360:intron 45.0%
ACCTATGATAGGTCCGTAAG+GGG - chr7_1:72710643-72710662 None:intergenic 45.0%
GACCTATGATAGGTCCGTAA+GGG - chr7_1:72710644-72710663 None:intergenic 45.0%
TGACCTATGATAGGTCCGTA+AGG - chr7_1:72710645-72710664 None:intergenic 45.0%
TAAGGACGGTGACCTATGAT+AGG - chr7_1:72710654-72710673 None:intergenic 45.0%
ATTCGGATGTCTTTGTGGAG+TGG + chr7_1:72710959-72710978 Msa1036360:intron 45.0%
!! TTGATGATGAGCAGGTACCA+TGG + chr7_1:72711538-72711557 Msa1036360:intron 45.0%
! TGATGATGAGCAGGTACCAT+GGG + chr7_1:72711539-72711558 Msa1036360:intron 45.0%
AGTCCTATCTGGGAGAGATA+AGG - chr7_1:72711763-72711782 None:intergenic 45.0%
!!! TTTGAAATAAAAAAATATTA+AGG + chr7_1:72709920-72709939 Msa1036360:intron 5.0%
!! TTGAAATAAAAAAATATTAA+GGG + chr7_1:72709921-72709940 Msa1036360:intron 5.0%
!! TTTAATTAATTTATTAAGTT+GGG - chr7_1:72711052-72711071 None:intergenic 5.0%
!!! TTTTAATTAATTTATTAAGT+TGG - chr7_1:72711053-72711072 None:intergenic 5.0%
! AGTGGATTCGGATCTGGGAA+AGG - chr7_1:72708188-72708207 None:intergenic 50.0%
! GATGGTGTTGGATTGGGTTG+TGG - chr7_1:72708299-72708318 None:intergenic 50.0%
! TTGCGCCATGCCTTTTCGAT+TGG - chr7_1:72708373-72708392 None:intergenic 50.0%
AAGGCATGGCGCAAAATGCA+CGG + chr7_1:72708379-72708398 Msa1036360:CDS 50.0%
CACGGTGAAGATGATTGGGT+TGG + chr7_1:72708397-72708416 Msa1036360:CDS 50.0%
!!! GGTTGGCCTTTTGGATCCAA+TGG + chr7_1:72708414-72708433 Msa1036360:CDS 50.0%
GTCACCTCATACCCTATGTG+TGG - chr7_1:72708580-72708599 None:intergenic 50.0%
GAGCGAACACGCAAATTGGA+TGG + chr7_1:72708675-72708694 Msa1036360:CDS 50.0%
CGAACATCGTTGTCTGGACA+AGG - chr7_1:72709078-72709097 None:intergenic 50.0%
! GATATGGTGCCAAAGTCACC+AGG + chr7_1:72709441-72709460 Msa1036360:CDS 50.0%
GCAGATGCAGCATCAGCATT+AGG - chr7_1:72709594-72709613 None:intergenic 50.0%
CCCATCGAGTATGTGCAAGT+GGG - chr7_1:72709631-72709650 None:intergenic 50.0%
CCCACTTGCACATACTCGAT+GGG + chr7_1:72709628-72709647 Msa1036360:CDS 50.0%
ACCCATCGAGTATGTGCAAG+TGG - chr7_1:72709632-72709651 None:intergenic 50.0%
TCGTTATCTATCGTGTCCGG+GGG + chr7_1:72710549-72710568 Msa1036360:intron 50.0%
TCCCCTTACGGACCTATCAT+AGG + chr7_1:72710639-72710658 Msa1036360:intron 50.0%
AGCACTCTGTGCCACCAAAT+TGG + chr7_1:72711638-72711657 Msa1036360:CDS 50.0%
ACTCTGTGCCACCAAATTGG+AGG + chr7_1:72711641-72711660 Msa1036360:CDS 50.0%
TGAAGACCGAAGATGGACGT+TGG + chr7_1:72711686-72711705 Msa1036360:CDS 50.0%
GAAGACCGAAGATGGACGTT+GGG + chr7_1:72711687-72711706 Msa1036360:CDS 50.0%
! GAGCCTTATCTCTCCCAGAT+AGG + chr7_1:72711757-72711776 Msa1036360:CDS 50.0%
GTAGAGACGTCGTCGTTGCT+TGG + chr7_1:72708980-72708999 Msa1036360:CDS 55.0%
GCCCACTTGCACATACTCGA+TGG + chr7_1:72709627-72709646 Msa1036360:CDS 55.0%
TATCGTGTCCGGGGGTTTGA+GGG + chr7_1:72710557-72710576 Msa1036360:intron 55.0%
CATATCCACGGTTGCTCCCA+TGG - chr7_1:72711558-72711577 None:intergenic 55.0%
CAGCACCCAACGTCCATCTT+CGG - chr7_1:72711695-72711714 None:intergenic 55.0%
CTATCGTGTCCGGGGGTTTG+AGG + chr7_1:72710556-72710575 Msa1036360:intron 60.0%
ATCGTGTCCGGGGGTTTGAG+GGG + chr7_1:72710558-72710577 Msa1036360:intron 60.0%
AGGTACCATGGGAGCAACCG+TGG + chr7_1:72711550-72711569 Msa1036360:intron 60.0%
CGAAGATGGACGTTGGGTGC+TGG + chr7_1:72711693-72711712 Msa1036360:CDS 60.0%
GACGTCGTCGTTGCTTGGCG+AGG + chr7_1:72708985-72709004 Msa1036360:CDS 65.0%
TCGTGTCCGGGGGTTTGAGG+GGG + chr7_1:72710559-72710578 Msa1036360:intron 65.0%
CATGGTCCCCCTCAAACCCC+CGG - chr7_1:72710568-72710587 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72708098 72711963 72708098 ID=Msa1036360;Name=Msa1036360
chr7_1 mRNA 72708098 72711963 72708098 ID=Msa1036360-mRNA-1;Parent=Msa1036360;Name=Msa1036360-mRNA-1;_AED=0.24;_eAED=0.24;_QI=56|1|1|1|1|1|3|159|503
chr7_1 exon 72708098 72708739 72708098 ID=Msa1036360-mRNA-1:exon:17767;Parent=Msa1036360-mRNA-1
chr7_1 exon 72708977 72709649 72708977 ID=Msa1036360-mRNA-1:exon:17768;Parent=Msa1036360-mRNA-1
chr7_1 exon 72711552 72711963 72711552 ID=Msa1036360-mRNA-1:exon:17769;Parent=Msa1036360-mRNA-1
chr7_1 five_prime_UTR 72708098 72708153 72708098 ID=Msa1036360-mRNA-1:five_prime_utr;Parent=Msa1036360-mRNA-1
chr7_1 CDS 72708154 72708739 72708154 ID=Msa1036360-mRNA-1:cds;Parent=Msa1036360-mRNA-1
chr7_1 CDS 72708977 72709649 72708977 ID=Msa1036360-mRNA-1:cds;Parent=Msa1036360-mRNA-1
chr7_1 CDS 72711552 72711804 72711552 ID=Msa1036360-mRNA-1:cds;Parent=Msa1036360-mRNA-1
chr7_1 three_prime_UTR 72711805 72711963 72711805 ID=Msa1036360-mRNA-1:three_prime_utr;Parent=Msa1036360-mRNA-1
Gene Sequence

>Msa1036360

ATGGCTGTATCAATCTCAAACATGCTCATAGCCTTTCCCAGATCCGAATCCACTTTCTTCTTCGGATCCAACTCCAACCACCTCAAATTCCAAACAACACAACCAATAACCCTAACAACAAAAAAACTCACCACAAAATGCACCACAACCCAATCCAACACCATCACACAACTCCAATCACAACCCACAAAACAATCATCAAAACTTACTGAACTACCAATCGAAAAGGCATGGCGCAAAATGCACGGTGAAGATGATTGGGTTGGCCTTTTGGATCCAATGGATCCAATAATGCGATCTGAACTAATCCGTTATGGAGAGATGTCCCAAGCCTGTTATGATGCATTTGATTTTGATCCATATTCAAAATATTGTGGTAGTTGCAAACACCCACACCTTGAATTTTTCCCATCGTTAGATCTTCCACACATAGGGTATGAGGTGACACGCTACCTCTACGCCACAGCAAATGTTAACGTCCCAGATTTCTTTAAGAAATCTCGATGGCCAGATAAATATTGGAGCGAACACGCAAATTGGATGGGATACATAGCCGTTTCAAACGATGAAACAACAAAACAGATAGGTCGTAGAGACGTCGTCGTTGCTTGGCGAGGTACTGTGACTCATGTTGAATGGGTAGCCAATCTTCAAAATTTTCTTAAACCTATTTACCAAGACATTCCTTGTCCAGACAACGATGTTCGAGTAGAAGCAGGTTTTCTTGATATGTACACCGATAGACAAACAAAAGACGGTTATTGCAAATATTCTGCTAGAGAACAAGTTTTAGGAGAAGTGAAAAGGTTGTTAGAGAAATTTCCTAATGAAGAAGTTAGTATTACGTTAACGGGACATAGTTTAGGGAGTGCTATGGCAACATTAAGTGCGTTTGATATAGCAGAAACACGGTTAAATGTTAGGGAAAATGGTGAAAAAATTCATGTTTCAGTATTTTCATTTTCTGGACCTAGGGTTGGGAACGTGAAATTTAAAGGGAGATTGGAGAAACATTTAGGGGTTAAGATTTTGAGGGTTCATAATAAGCATGATATGGTGCCAAAGTCACCAGGGTTTCTTATTAATGAGAAATCGCCTGAGTGGTTATTAAAGTTTGCTGAGGATATTGATATTCCATGGTGTTACACTCATGTTGGAGTTGAGTTAGAGTTGGACCACAAGATTTCTCCATTTTTGAATCCTAATGCTGATGCTGCATCTGCTCATAACTTGGAGGCCCACTTGCACATACTCGATGGGTACCATGGGAGCAACCGTGGATATGAAGCAACCACTAAAAGGGACATTGCTTTGGTGAATAAGGCTTGTGACTTTGTGAAAGATGAGCACTCTGTGCCACCAAATTGGAGGCAAGATTTGAATAGGAATATGGTGAAGACCGAAGATGGACGTTGGGTGCTGGCTCAACGCCCACAACTTGCAGATACTCATCATGAAGACATTGAGCCTTATCTCTCCCAGATAGGACTCATCTCTTCATCTAATAAATAA

Protein sequence

>Msa1036360

MAVSISNMLIAFPRSESTFFFGSNSNHLKFQTTQPITLTTKKLTTKCTTTQSNTITQLQSQPTKQSSKLTELPIEKAWRKMHGEDDWVGLLDPMDPIMRSELIRYGEMSQACYDAFDFDPYSKYCGSCKHPHLEFFPSLDLPHIGYEVTRYLYATANVNVPDFFKKSRWPDKYWSEHANWMGYIAVSNDETTKQIGRRDVVVAWRGTVTHVEWVANLQNFLKPIYQDIPCPDNDVRVEAGFLDMYTDRQTKDGYCKYSAREQVLGEVKRLLEKFPNEEVSITLTGHSLGSAMATLSAFDIAETRLNVRENGEKIHVSVFSFSGPRVGNVKFKGRLEKHLGVKILRVHNKHDMVPKSPGFLINEKSPEWLLKFAEDIDIPWCYTHVGVELELDHKISPFLNPNADAASAHNLEAHLHILDGYHGSNRGYEATTKRDIALVNKACDFVKDEHSVPPNWRQDLNRNMVKTEDGRWVLAQRPQLADTHHEDIEPYLSQIGLISSSNK*