AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172070 MtrunA17_Chr1g0190351 98.133 964 16 2 1 964 33 994 0.0 1930
Msa0172070 MtrunA17_Chr8g0349601 36.842 76 48 0 288 363 203 278 8.59e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172070 AT2G21440.1 47.605 1023 414 20 24 964 21 1003 0.0 807
Msa0172070 AT1G54080.1 27.103 214 127 5 199 400 64 260 6.20e-11 66.2

Find 219 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTCCTTTGGTTCTTT+TGG 0.103039 1_4:-57006569 None:intergenic
TCTGTTTCCTTGGAAGTTTC+AGG 0.151548 1_4:-57011226 None:intergenic
TGCTTCTGGGATGGGTATTT+TGG 0.157301 1_4:+57011530 Msa0172070:CDS
CGTTACGAAGTTTCAATTTC+TGG 0.157364 1_4:-57012830 None:intergenic
TTAACAGTTTCCTTGGATTT+TGG 0.171316 1_4:-57011148 None:intergenic
ACTGAATCTTTGTTCTTCTT+TGG 0.190926 1_4:-57013317 None:intergenic
GGGGTCCCCTTTCTGTCTTT+TGG 0.224958 1_4:-57013063 None:intergenic
TCAACTGCCAATACTGCTTC+TGG 0.228699 1_4:+57011516 Msa0172070:CDS
AAGAAAGAAGACGCAGTATT+TGG 0.233382 1_4:+57013239 Msa0172070:CDS
GTAATTTAGCACCATGATTC+TGG 0.234712 1_4:-57013169 None:intergenic
GGTAAGGGGTAGACCATTAA+AGG 0.238442 1_4:+57011551 Msa0172070:CDS
GTTGCTAGAACTGTTATATT+TGG 0.244405 1_4:+57006993 Msa0172070:CDS
AGAGCCTTTAAAACCTTTAA+TGG 0.253378 1_4:-57011564 None:intergenic
GATAAAGACAGCGGATTATC+TGG 0.273260 1_4:+57006524 Msa0172070:CDS
AGGCCAAAGAAAATGAAATA+AGG 0.273524 1_4:+57008615 Msa0172070:intron
ACCTGTTAGGCGCTGTTTCA+TGG 0.290840 1_4:+57005280 Msa0172070:CDS
AAACTCAATGGATCGAAGTT+TGG 0.305477 1_4:+57008956 Msa0172070:CDS
TTTCATCTGCGGGGACTGTA+TGG 0.307723 1_4:+57008645 Msa0172070:CDS
CACTTCGGTATTTGTACTCT+TGG 0.308629 1_4:-57013084 None:intergenic
TCCACAATTGGCCGATGTTC+AGG 0.314138 1_4:-57012789 None:intergenic
TTCCTTTCCGAAGAAGCTTT+TGG 0.331812 1_4:-57013125 None:intergenic
TAACCAACCTGCCGAATTAC+AGG 0.333219 1_4:-57012205 None:intergenic
TCTACACAACATCGTGGTTT+TGG 0.333522 1_4:+57005392 Msa0172070:CDS
CAATCACAACCTTCTTCCTT+TGG 0.333819 1_4:-57006578 None:intergenic
ACTTCGGTATTTGTACTCTT+GGG 0.335882 1_4:-57013083 None:intergenic
ATAGTTCCATTGACAGTAAT+AGG 0.336958 1_4:+57013204 Msa0172070:CDS
CACCATGATTCTGGCCATCT+TGG 0.340703 1_4:-57013160 None:intergenic
ACCATGAAACAGCGCCTAAC+AGG 0.342107 1_4:-57005281 None:intergenic
TGTCAGAAACCTTCCTTTCA+AGG 0.342388 1_4:+57008510 Msa0172070:CDS
TTTCATAACAAAATTATGAT+TGG 0.345149 1_4:-57013463 None:intergenic
CAAATCAACTTCTGTTTCCT+TGG 0.354494 1_4:-57011236 None:intergenic
GTCGTCTCATAGCTGTTGAT+TGG 0.358840 1_4:+57008981 Msa0172070:CDS
AACTCAATGGATCGAAGTTT+GGG 0.358983 1_4:+57008957 Msa0172070:CDS
GTTATTTACAGATTCGTCTT+TGG 0.369847 1_4:-57011095 None:intergenic
AAGCAGGGGAAAAGGTTTCT+AGG 0.374787 1_4:+57013288 Msa0172070:CDS
TGCACCCTTAACAGTTTCCT+TGG 0.378021 1_4:-57011155 None:intergenic
CTGTTTCATGGTTACACAAA+AGG 0.380370 1_4:+57005292 Msa0172070:CDS
GACAGTAATAGGAAAATATC+AGG 0.382523 1_4:+57013215 Msa0172070:CDS
CTATTAAGCATCCCCTTTCA+AGG 0.383007 1_4:+57007084 Msa0172070:CDS
GCTGAAACCCCTTCGGCAGC+TGG 0.384100 1_4:-57011785 None:intergenic
CTGAGAGTTAGTGAAGGAAT+AGG 0.388327 1_4:-57005137 None:intergenic
AGAACCCTTGTGTGAGAACT+TGG 0.390972 1_4:-57013390 None:intergenic
CTCTGAAGCAGGAGCATCAT+TGG 0.391724 1_4:-57009035 None:intergenic
AAAATCCAAGGAAACTGTTA+AGG 0.392787 1_4:+57011150 Msa0172070:CDS
AAAGGCTCTGGACAAGAAAT+CGG 0.400061 1_4:+57011578 Msa0172070:CDS
CCGTGTTCACTATTTGAATC+TGG 0.400337 1_4:-57012999 None:intergenic
GCTAGAACTGTTATATTTGG+TGG 0.404207 1_4:+57006996 Msa0172070:CDS
CACCGCCAAGCCAGAGAAAT+CGG 0.405483 1_4:+57007050 Msa0172070:CDS
ATCTAATTCAAAGGGAAGAT+TGG 0.406524 1_4:-57011278 None:intergenic
GAACAAACTTTCAGTGAAGT+TGG 0.409004 1_4:+57005257 Msa0172070:CDS
AAGCTTCCATTTCTGAGTCT+TGG 0.414414 1_4:-57008485 None:intergenic
AGACCACCGCAATCTTTACT+TGG 0.416144 1_4:+57011641 Msa0172070:CDS
TCCTGTGTGCAGTCTTTCAA+AGG 0.416759 1_4:+57008788 Msa0172070:intron
AAACCGTTGCTTCACTTCTT+CGG 0.420518 1_4:-57011302 None:intergenic
TTAGAAACAAAGAGTGTTAA+CGG 0.425518 1_4:-57005109 None:intergenic
TGCGTAAACTCCCGCATTGT+CGG 0.425962 1_4:-57012916 None:intergenic
TGAGCTGAAGAACGGTTCAT+TGG 0.431497 1_4:+57006252 Msa0172070:CDS
GGCCAAAGAAAATGAAATAA+GGG 0.433746 1_4:+57008616 Msa0172070:intron
AGAAAGTCCAAAAGCTTCTT+CGG 0.435552 1_4:+57013118 Msa0172070:CDS
CCAAGCAAATACCTGTAATT+CGG 0.436673 1_4:+57012194 Msa0172070:CDS
TTGGTCACTTGGTGGAGAAC+AGG 0.437156 1_4:-57011355 None:intergenic
CTGAAGATCATTCCTTGAAA+GGG 0.446240 1_4:-57007096 None:intergenic
ACACACAGTGCCGATTTCTC+TGG 0.447857 1_4:-57007060 None:intergenic
TGCCGATTTCTCTGGCTTGG+CGG 0.449281 1_4:-57007052 None:intergenic
CAACTGCCAATACTGCTTCT+GGG 0.451408 1_4:+57011517 Msa0172070:CDS
AAATTTAATATAAACAACTT+AGG 0.453008 1_4:+57013932 Msa0172070:three_prime_UTR
AGAGTTCTTAACAATAATCC+TGG 0.454597 1_4:+57012435 Msa0172070:CDS
GATGAAGAGAGAAAGAAAGA+AGG 0.455594 1_4:-57004996 None:intergenic
AATCTAAACAGCTTAGGAAA+TGG 0.456031 1_4:+57013438 Msa0172070:CDS
TGAGAGTTAGTGAAGGAATA+GGG 0.456317 1_4:-57005136 None:intergenic
CCTGTGTGCAGTCTTTCAAA+GGG 0.458416 1_4:+57008789 Msa0172070:intron
TGAACCGTTCTTCAGCTCAA+TGG 0.460449 1_4:-57006248 None:intergenic
GGCTTGGCGGTGAACATCTT+CGG 0.460580 1_4:-57007039 None:intergenic
CTAGGACATACTTGGTCACT+TGG 0.461965 1_4:-57011366 None:intergenic
GCGTAAACTCCCGCATTGTC+GGG 0.462564 1_4:-57012915 None:intergenic
GCCAATACTGCTTCTGGGAT+GGG 0.465705 1_4:+57011522 Msa0172070:CDS
TCAAGAGCAAACTCCACAAT+TGG 0.466178 1_4:-57012801 None:intergenic
TAACGGCGGACATTGTTTAA+CGG 0.467270 1_4:-57005092 None:intergenic
ATCGGCTCATGACAAGGAAC+AGG 0.468605 1_4:+57011596 Msa0172070:CDS
ACCCATCCCAGAAGCAGTAT+TGG 0.471074 1_4:-57011523 None:intergenic
TTTGGGCACGCCAACTTGGT+GGG 0.473129 1_4:+57007769 Msa0172070:CDS
ACTGTTTGGGCACGCCAACT+TGG 0.473827 1_4:+57007765 Msa0172070:CDS
CCAAGAACAAGCAGGGGAAA+AGG 0.475052 1_4:+57013280 Msa0172070:CDS
TCAGTGAAGTTGGACCTGTT+AGG 0.475659 1_4:+57005267 Msa0172070:CDS
CACCCACCCGGTCCATAATG+AGG 0.475726 1_4:+57004941 None:intergenic
CGTTCTTCAGCTCAATGGCT+TGG 0.475932 1_4:-57006243 None:intergenic
TAGGAGGGACTTATTCTTGA+CGG 0.477564 1_4:+57011758 Msa0172070:intron
CAGGCGATTCGAAAACTCAA+TGG 0.479592 1_4:+57008944 Msa0172070:intron
AGATGAGGCTCAAAAGAAGT+AGG 0.479760 1_4:-57013514 None:intergenic
TGCAGGCGTCCACGAGGGAC+TGG 0.480915 1_4:+57011450 Msa0172070:intron
ATGAAGAGAGAAAGAAAGAA+GGG 0.482133 1_4:-57004995 None:intergenic
GGCAAATCCAAAAGACAGAA+AGG 0.484725 1_4:+57013056 Msa0172070:CDS
TACAGATTCGTCTTTGGCAG+AGG 0.486047 1_4:-57011089 None:intergenic
TGCCAATACTGCTTCTGGGA+TGG 0.486395 1_4:+57011521 Msa0172070:CDS
GTTTGGGCACGCCAACTTGG+TGG 0.487001 1_4:+57007768 Msa0172070:CDS
CGAAGATCGAAACCGGATCA+AGG 0.488053 1_4:+57006331 Msa0172070:CDS
CAGTGCCGATTTCTCTGGCT+TGG 0.490360 1_4:-57007055 None:intergenic
AGCATCAATCAACCTTGATC+CGG 0.491692 1_4:-57006343 None:intergenic
AATGATAAACCCGACAATGC+GGG 0.495453 1_4:+57012906 Msa0172070:CDS
CTATTCCTTCACTAACTCTC+AGG 0.495586 1_4:+57005138 Msa0172070:CDS
GATTTCTTTAGGACAACAAA+AGG 0.498067 1_4:+57010889 Msa0172070:intron
TCGTCTCATAGCTGTTGATT+GGG 0.499678 1_4:+57008982 Msa0172070:CDS
TCATTGACCACAGAAACCTT+TGG 0.500631 1_4:+57012765 Msa0172070:intron
TTCTCACACAAGGGTTCTCA+AGG 0.501028 1_4:+57013395 Msa0172070:CDS
ACGGTTCATTGGTTGGTGAC+CGG 0.501056 1_4:+57006263 Msa0172070:CDS
AGGGAGCCAAGACTCAGAAA+TGG 0.503890 1_4:+57008479 Msa0172070:intron
AGAAATATCTGAAACCTTGT+CGG 0.504739 1_4:-57011200 None:intergenic
CATCATCATCGGCGAGGCGA+TGG 0.506850 1_4:+57005027 Msa0172070:exon
GCAAATCCAAAAGACAGAAA+GGG 0.507205 1_4:+57013057 Msa0172070:CDS
TGAAAATCGAAGATCGAAAC+CGG 0.507609 1_4:+57006324 Msa0172070:CDS
GGGAAAAGGTTTCTAGGAAA+AGG 0.509364 1_4:+57013294 Msa0172070:CDS
TGTTTCATGGTTACACAAAA+GGG 0.510933 1_4:+57005293 Msa0172070:CDS
CCGAATTACAGGTATTTGCT+TGG 0.511846 1_4:-57012194 None:intergenic
TCTTCGGTATCTAATTCAAA+GGG 0.513395 1_4:-57011286 None:intergenic
GCTGAAGATCATTCCTTGAA+AGG 0.515929 1_4:-57007097 None:intergenic
CACGGTGGTAGAGTGCCAAA+TGG 0.516262 1_4:+57013017 Msa0172070:CDS
TCAACAGATCGAACCTTGAA+AGG 0.517773 1_4:-57008523 None:intergenic
TTCATCTGCGGGGACTGTAT+GGG 0.521165 1_4:+57008646 Msa0172070:CDS
AAGACGCAGTATTTGGAAAG+AGG 0.521867 1_4:+57013246 Msa0172070:CDS
ATCAGTGGCTGAAACCCCTT+CGG 0.522666 1_4:-57011792 None:intergenic
TTCTTCGGTATCTAATTCAA+AGG 0.523243 1_4:-57011287 None:intergenic
GACGGAACTCCAGCTGCCGA+AGG 0.523716 1_4:+57011776 Msa0172070:CDS
CAATGATGCTCCTGCTTCAG+AGG 0.523848 1_4:+57009036 Msa0172070:CDS
CAGATCGAACCTTGAAAGGA+AGG 0.524767 1_4:-57008519 None:intergenic
GAAATATTTATAGTTTGGAA+AGG 0.525585 1_4:+57012038 Msa0172070:intron
GAACAAAGATTCAGTAGGGA+AGG 0.527716 1_4:+57013325 Msa0172070:CDS
AACCAAGATGGCCAGAATCA+TGG 0.528146 1_4:+57013158 Msa0172070:CDS
TCCTGAACATCGGCCAATTG+TGG 0.528514 1_4:+57012788 Msa0172070:CDS
AAATCCAAGGAAACTGTTAA+GGG 0.531440 1_4:+57011151 Msa0172070:CDS
CTTCGGTATTTGTACTCTTG+GGG 0.533027 1_4:-57013082 None:intergenic
CCAAAAGAACCAAAGGAAGA+AGG 0.533227 1_4:+57006569 Msa0172070:CDS
AAGAAGAACAAAGATTCAGT+AGG 0.534680 1_4:+57013320 Msa0172070:CDS
GATGCAATAGAGGGCAATGA+AGG 0.535517 1_4:+57006476 Msa0172070:intron
AAATTACCTTCCTCTGAAGC+AGG 0.535871 1_4:-57009046 None:intergenic
TGCATTATCAGCTGCTTCCG+CGG 0.535875 1_4:-57011490 None:intergenic
ATGCATAACCAAGAACAAGC+AGG 0.537887 1_4:+57013272 Msa0172070:CDS
TTCCCAGGTCTGCTGCAAGA+AGG 0.538150 1_4:+57007648 Msa0172070:intron
GCAAATACCTGTAATTCGGC+AGG 0.538494 1_4:+57012198 Msa0172070:CDS
TTCTAAGCCTGAAACTTCCA+AGG 0.542108 1_4:+57011219 Msa0172070:CDS
GATGCTCCTGCTTCAGAGGA+AGG 0.546927 1_4:+57009040 Msa0172070:CDS
ACTGACAAAGAATCTGATCA+AGG 0.547224 1_4:+57010959 Msa0172070:CDS
TGGCCGATGTTCAGGACCAA+AGG 0.547311 1_4:-57012781 None:intergenic
GGACATACTTGGTCACTTGG+TGG 0.548184 1_4:-57011363 None:intergenic
AAAGAACAAGCCAAAATCCA+AGG 0.552898 1_4:+57011138 Msa0172070:CDS
ACGGAACTCCAGCTGCCGAA+GGG 0.553197 1_4:+57011777 Msa0172070:CDS
CAATGTTGCAACAGAAGCAC+GGG 0.556088 1_4:-57007718 None:intergenic
TTGGGCACGCCAACTTGGTG+GGG 0.556141 1_4:+57007770 Msa0172070:CDS
TGGTCTCGTGAATTCTGCTA+TGG 0.558745 1_4:+57007016 Msa0172070:CDS
GGCACGCCAACTTGGTGGGG+AGG 0.559247 1_4:+57007773 Msa0172070:CDS
CATGGTGCTAAATTACATGA+AGG 0.559370 1_4:+57013176 Msa0172070:CDS
TTCAGTTCCAAAAGAACCAA+AGG 0.560178 1_4:+57006562 Msa0172070:CDS
ATCATCATCGGCGAGGCGAT+GGG 0.563341 1_4:+57005028 Msa0172070:exon
ATTCAAGAAAAGCGACTCCA+CGG 0.563574 1_4:-57012380 None:intergenic
CTGAAGAACGGTTCATTGGT+TGG 0.563589 1_4:+57006256 Msa0172070:CDS
CAAGAAATCGGCTCATGACA+AGG 0.564214 1_4:+57011590 Msa0172070:CDS
ACTTTACCTCCCCACCAAGT+TGG 0.564510 1_4:-57007779 None:intergenic
TTGTAATGACACAGCAGATG+AGG 0.565429 1_4:+57006751 Msa0172070:CDS
GTCCAAAAGCTTCTTCGGAA+AGG 0.566021 1_4:+57013123 Msa0172070:CDS
AGAAGAACAAAGATTCAGTA+GGG 0.570029 1_4:+57013321 Msa0172070:CDS
CAAATCCAAAAGACAGAAAG+GGG 0.571325 1_4:+57013058 Msa0172070:CDS
GAAAGATGGCAGGAAAGGAA+AGG 0.571880 1_4:+57012335 Msa0172070:CDS
TGCATAACCAAGAACAAGCA+GGG 0.575155 1_4:+57013273 Msa0172070:CDS
GATGAGGCTCAAAAGAAGTA+GGG 0.575330 1_4:-57013513 None:intergenic
TGTAATGACACAGCAGATGA+GGG 0.575965 1_4:+57006752 Msa0172070:CDS
TGACAAACCAGCAAAAGACT+TGG 0.576336 1_4:+57012974 Msa0172070:CDS
GCAATGTTGCAACAGAAGCA+CGG 0.579403 1_4:-57007719 None:intergenic
TTCTTTCGATGAGATCACTT+CGG 0.585525 1_4:-57013099 None:intergenic
CCGCAATCTTTACTTGGCGA+AGG 0.588434 1_4:+57011647 Msa0172070:CDS
CGGAACTCCAGCTGCCGAAG+GGG 0.589924 1_4:+57011778 Msa0172070:CDS
AAAGCTACAGTATCAGCAGC+GGG 0.590881 1_4:+57012854 Msa0172070:CDS
TTCAAGAAAAGCGACTCCAC+GGG 0.595349 1_4:-57012379 None:intergenic
TTGTCAAAATCATCGTCAGA+AGG 0.599134 1_4:-57011022 None:intergenic
CAAAAGGTGACAGATGAAGA+TGG 0.601633 1_4:+57010905 Msa0172070:CDS
AAAACTACAAAATTAAGTCA+TGG 0.604774 1_4:+57013867 Msa0172070:three_prime_UTR
AACCCTCATTATGGACCGGG+TGG 0.605330 1_4:-57004944 None:intergenic
TACCCTGTGTCGGACTTCTG+TGG 0.606080 1_4:-57008680 None:intergenic
TAATGACACAGCAGATGAGG+GGG 0.608560 1_4:+57006754 Msa0172070:CDS
ATTCCACAGAAGTCCGACAC+AGG 0.608649 1_4:+57008677 Msa0172070:CDS
AGGAATGATCTTCAGCAGCA+TGG 0.610357 1_4:+57007104 Msa0172070:CDS
ACCCACCCGGTCCATAATGA+GGG 0.613936 1_4:+57004942 None:intergenic
AAGGAATATATACCCTGTGT+CGG 0.616888 1_4:-57008690 None:intergenic
ACTTGAAATAACTCAAGATG+AGG 0.618188 1_4:-57013529 None:intergenic
AAGGGTTCTCAAGGAAATGA+CGG 0.619296 1_4:+57013404 Msa0172070:CDS
CAGCAGCGGGCTCCTCACAA+TGG 0.623421 1_4:+57012867 Msa0172070:CDS
TAGATCCAAGTTCTCACACA+AGG 0.623451 1_4:+57013385 Msa0172070:CDS
TTTCTGCTGTTGCCATTGTG+AGG 0.623452 1_4:-57012879 None:intergenic
GAGTACCTGAGAGTTAGTGA+AGG 0.624188 1_4:-57005143 None:intergenic
TGAAGATCATTCCTTGAAAG+GGG 0.624383 1_4:-57007095 None:intergenic
CAAGCCATTGAGCTGAAGAA+CGG 0.627871 1_4:+57006244 Msa0172070:CDS
ATCTGCGGGGACTGTATGGG+AGG 0.628989 1_4:+57008649 Msa0172070:CDS
AAATGATAAACCCGACAATG+CGG 0.629902 1_4:+57012905 Msa0172070:CDS
CCAAATGGAAAATCTCCTCA+AGG 0.629918 1_4:+57013032 Msa0172070:CDS
CCAGATTCAAATAGTGAACA+CGG 0.633933 1_4:+57012999 Msa0172070:CDS
AAACCTTTGGTCCTGAACAT+CGG 0.642171 1_4:+57012778 Msa0172070:CDS
GTAATGACACAGCAGATGAG+GGG 0.644262 1_4:+57006753 Msa0172070:CDS
TCATGGTAACTAACATAGCA+CGG 0.646595 1_4:+57013884 Msa0172070:three_prime_UTR
CAAGAACAGCAGTATTCCCG+TGG 0.650331 1_4:+57012363 Msa0172070:CDS
ACCCTCATTATGGACCGGGT+GGG 0.652142 1_4:-57004943 None:intergenic
AGATGGTAGTACTACTACTG+AGG 0.654593 1_4:+57010922 Msa0172070:CDS
ATACCGAAGAAGTGAAGCAA+CGG 0.656518 1_4:+57011299 Msa0172070:CDS
AATGCGGGAGTTTACGCACA+TGG 0.658005 1_4:+57012921 Msa0172070:CDS
TAGTGATATTGATAGTGTTG+TGG 0.658825 1_4:+57010988 Msa0172070:CDS
CTCAATGCAGGCGTCCACGA+GGG 0.661595 1_4:+57011445 Msa0172070:intron
TGATATTGATAGTGTTGTGG+AGG 0.663472 1_4:+57010991 Msa0172070:CDS
TTCCACAGAAGTCCGACACA+GGG 0.667711 1_4:+57008678 Msa0172070:CDS
TTAAGAAAACCAGTCCCTCG+TGG 0.669577 1_4:-57011459 None:intergenic
ATGAAGGAAAATAGCGACGA+CGG 0.674278 1_4:+57005067 Msa0172070:CDS
GCATAACCAAGAACAAGCAG+GGG 0.676330 1_4:+57013274 Msa0172070:CDS
AACATCTAAAGAGTCCGACA+AGG 0.679032 1_4:+57011186 Msa0172070:CDS
ACTCAATGCAGGCGTCCACG+AGG 0.680693 1_4:+57011444 Msa0172070:intron
AAAAGCTACAGTATCAGCAG+CGG 0.686433 1_4:+57012853 Msa0172070:CDS
AGATCCAAGTTCTCACACAA+GGG 0.701976 1_4:+57013386 Msa0172070:CDS
TCGCCAAGTAAAGATTGCGG+TGG 0.704028 1_4:-57011644 None:intergenic
TCAGGGTCTACACAACATCG+TGG 0.720317 1_4:+57005386 Msa0172070:intron
AATGGAAAATCTCCTCAAGG+AGG 0.725686 1_4:+57013035 Msa0172070:CDS
AATGACACAGCAGATGAGGG+GGG 0.726717 1_4:+57006755 Msa0172070:CDS
CCTTCGCCAAGTAAAGATTG+CGG 0.731180 1_4:-57011647 None:intergenic
GAAACAAAGAGTGTTAACGG+CGG 0.786080 1_4:-57005106 None:intergenic
GATTCAAATAGTGAACACGG+TGG 0.855909 1_4:+57013002 Msa0172070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTATTTTTATTT+TGG - chr1_4:57012561-57012580 None:intergenic 0.0%
!!! TTTTATTTTTATTTTTATTT+TGG - chr1_4:57012561-57012580 None:intergenic 0.0%
!! AAAAGAATGATAAATAAAAA+TGG - chr1_4:57005197-57005216 None:intergenic 10.0%
!!! AAAAATAAGTTTTTTTTTTC+AGG + chr1_4:57005368-57005387 Msa0172070:intron 10.0%
!!! AAAATAAGTTTTTTTTTTCA+GGG + chr1_4:57005369-57005388 Msa0172070:intron 10.0%
!! TTCTAATAATATATGTAAAA+CGG - chr1_4:57006147-57006166 None:intergenic 10.0%
!!! TTTTGTATTGATTTTTAATT+TGG + chr1_4:57008367-57008386 Msa0172070:intron 10.0%
!!! ACATAAAATAATTTTTTGTT+TGG + chr1_4:57008554-57008573 Msa0172070:intron 10.0%
!! TTTCATTAATAAATAGTTAT+TGG + chr1_4:57009527-57009546 Msa0172070:intron 10.0%
!! TGATTAAAGATAAAAAAAAA+AGG + chr1_4:57010032-57010051 Msa0172070:intron 10.0%
!!! AAAAATTACTTATTTTAATG+AGG + chr1_4:57010069-57010088 Msa0172070:intron 10.0%
!!! TCTTTTAAATTGTAATTAAT+AGG + chr1_4:57011739-57011758 Msa0172070:intron 10.0%
!! AAATTTAATATAAACAACTT+AGG + chr1_4:57013932-57013951 Msa0172070:three_prime_UTR 10.0%
!! CTTTATTAAATATCATATCA+TGG - chr1_4:57005527-57005546 None:intergenic 15.0%
!! ATTTCGATTATTATCAAATA+GGG - chr1_4:57005611-57005630 None:intergenic 15.0%
!! TATTTCGATTATTATCAAAT+AGG - chr1_4:57005612-57005631 None:intergenic 15.0%
!!! CAATTTTTGAACTTTATTAT+AGG + chr1_4:57005990-57006009 Msa0172070:intron 15.0%
!! TAAATATATAAATGAACAAC+TGG - chr1_4:57006630-57006649 None:intergenic 15.0%
!! TCTATATAAAAGATACTATA+TGG - chr1_4:57007845-57007864 None:intergenic 15.0%
!! AAAAAATCTTAATAACTACA+GGG + chr1_4:57008008-57008027 Msa0172070:intron 15.0%
!! ATTTACGAAATTCAAATTAT+AGG - chr1_4:57008302-57008321 None:intergenic 15.0%
!! ATAATTTGAATTTCGTAAAT+TGG + chr1_4:57008302-57008321 Msa0172070:intron 15.0%
!!! ATGATTATTTTATTGAAAAG+TGG - chr1_4:57009485-57009504 None:intergenic 15.0%
!! ATTAATAAATAGTTATTGGT+GGG + chr1_4:57009531-57009550 Msa0172070:intron 15.0%
!! TGTATATTAGTAGAAAAATA+CGG + chr1_4:57009784-57009803 Msa0172070:intron 15.0%
!! AAAATAATAAAAAAGTGATG+TGG + chr1_4:57009883-57009902 Msa0172070:intron 15.0%
!! TTATTATATTTATGTATACG+TGG - chr1_4:57010001-57010020 None:intergenic 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr1_4:57010196-57010215 None:intergenic 15.0%
!!! AAAAGTACTTTTTTAAATGA+AGG + chr1_4:57010196-57010215 Msa0172070:intron 15.0%
!!! TCATTTAAAAAAGTACTTTT+TGG - chr1_4:57010196-57010215 None:intergenic 15.0%
!!! AAAAAGTACTTTTTTAAATG+AGG + chr1_4:57010195-57010214 Msa0172070:intron 15.0%
!! TTTAAATTGTAATTAATAGG+AGG + chr1_4:57011742-57011761 Msa0172070:intron 15.0%
!! TTAAATTGTAATTAATAGGA+GGG + chr1_4:57011743-57011762 Msa0172070:intron 15.0%
!! TTTGTGAAATATTTATAGTT+TGG + chr1_4:57012033-57012052 Msa0172070:intron 15.0%
!! TTTCATAACAAAATTATGAT+TGG - chr1_4:57013466-57013485 None:intergenic 15.0%
!! CATTGTACTAAATAACATAT+CGG - chr1_4:57005699-57005718 None:intergenic 20.0%
!!! GTTTTGTGTATAATTGTTAT+TGG + chr1_4:57007167-57007186 Msa0172070:intron 20.0%
!! GCATATCATAATTATTAAAC+AGG - chr1_4:57007244-57007263 None:intergenic 20.0%
!! CAAAAAATCTTAATAACTAC+AGG + chr1_4:57008007-57008026 Msa0172070:intron 20.0%
!! TATGCATTGTCTTAAAAAAT+AGG + chr1_4:57008060-57008079 Msa0172070:intron 20.0%
!! ATGCATTGTCTTAAAAAATA+GGG + chr1_4:57008061-57008080 Msa0172070:intron 20.0%
!! ATATCTTAATCTACAAACAT+GGG - chr1_4:57008165-57008184 None:intergenic 20.0%
!! AATATCTTAATCTACAAACA+TGG - chr1_4:57008166-57008185 None:intergenic 20.0%
!!! TTGATTTTTAATTTGGTCAT+AGG + chr1_4:57008374-57008393 Msa0172070:intron 20.0%
!! ATGGTAATATTCATTAAACA+GGG - chr1_4:57008414-57008433 None:intergenic 20.0%
!! AATGGTAATATTCATTAAAC+AGG - chr1_4:57008415-57008434 None:intergenic 20.0%
!! AACAAACTAAGTATCATAAA+TGG - chr1_4:57008433-57008452 None:intergenic 20.0%
!!! TCACTACTAAATATCTTTTT+TGG - chr1_4:57009013-57009032 None:intergenic 20.0%
!!! AAATTTTTTTTCCACATTGA+GGG - chr1_4:57009404-57009423 None:intergenic 20.0%
!! TCAATGTGGAAAAAAAATTT+GGG + chr1_4:57009404-57009423 Msa0172070:intron 20.0%
!! CATTAATAAATAGTTATTGG+TGG + chr1_4:57009530-57009549 Msa0172070:intron 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG + chr1_4:57009824-57009843 Msa0172070:intron 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG - chr1_4:57010131-57010150 None:intergenic 20.0%
!!! TATTGTTTATAGTTTTGTTG+CGG - chr1_4:57010131-57010150 None:intergenic 20.0%
!! TAATAATAATTGTTATACCC+AGG - chr1_4:57010641-57010660 None:intergenic 20.0%
!! GAAATATTTATAGTTTGGAA+AGG + chr1_4:57012038-57012057 Msa0172070:intron 20.0%
!!! GTTTTTGAAACATGAAAATT+TGG - chr1_4:57012088-57012107 None:intergenic 20.0%
!! TTGTAACATTCAAAACATAA+TGG - chr1_4:57012291-57012310 None:intergenic 20.0%
!! AATCAATCATAAAATGTGTA+CGG + chr1_4:57012584-57012603 Msa0172070:intron 20.0%
!! AATCAATCATAAAATGTGTA+CGG + chr1_4:57012584-57012603 Msa0172070:intron 20.0%
!!! AAGTTGAGATTTTAATTTCA+TGG + chr1_4:57013687-57013706 Msa0172070:intron 20.0%
!! TTACTTTAATCTATGACAAT+CGG - chr1_4:57013843-57013862 None:intergenic 20.0%
!! AAAACTACAAAATTAAGTCA+TGG + chr1_4:57013867-57013886 Msa0172070:three_prime_UTR 20.0%
!!! TTAGAAACAAAGAGTGTTAA+CGG - chr1_4:57005112-57005131 None:intergenic 25.0%
!! TCTTTTTACTTACAAAGATG+GGG - chr1_4:57005837-57005856 None:intergenic 25.0%
!! CTCTTTTTACTTACAAAGAT+GGG - chr1_4:57005838-57005857 None:intergenic 25.0%
!! ACTCTTTTTACTTACAAAGA+TGG - chr1_4:57005839-57005858 None:intergenic 25.0%
! CCATCAAAATATTGTGATTA+CGG - chr1_4:57006106-57006125 None:intergenic 25.0%
!! TTTCTTTTATGATGCAATAG+AGG + chr1_4:57006466-57006485 Msa0172070:intron 25.0%
!! TTCTTTTATGATGCAATAGA+GGG + chr1_4:57006467-57006486 Msa0172070:intron 25.0%
! AAAAATGATGATAAAGACAG+CGG + chr1_4:57006515-57006534 Msa0172070:CDS 25.0%
! AAAGATACATCCATAAAGAA+AGG - chr1_4:57006904-57006923 None:intergenic 25.0%
! AAAGAAAAAAACATAGAGCA+AGG - chr1_4:57006966-57006985 None:intergenic 25.0%
!!! TGCTCTATGTTTTTTTCTTT+TGG + chr1_4:57006966-57006985 Msa0172070:intron 25.0%
!!! TATGTTTTTTTCTTTTGGCA+GGG + chr1_4:57006971-57006990 Msa0172070:intron 25.0%
! TTTCAAATTACAGACAAGAT+AGG + chr1_4:57007145-57007164 Msa0172070:intron 25.0%
! AAATATGAACTGAAAAGAAC+AGG - chr1_4:57007273-57007292 None:intergenic 25.0%
! TACTCAACAATTGATCATAT+GGG - chr1_4:57007478-57007497 None:intergenic 25.0%
! ATACTCAACAATTGATCATA+TGG - chr1_4:57007479-57007498 None:intergenic 25.0%
! AAAGATTCTTTATACTGCTT+AGG + chr1_4:57007602-57007621 Msa0172070:intron 25.0%
! TTAGGATAGTAAGGTAATTA+TGG + chr1_4:57007620-57007639 Msa0172070:intron 25.0%
! ACATTGCATAAAAAAGAGAT+AGG + chr1_4:57007735-57007754 Msa0172070:CDS 25.0%
!!! AACATTTTTGTTGTTGTATG+TGG + chr1_4:57008453-57008472 Msa0172070:intron 25.0%
!!! ACATTTTTGTTGTTGTATGT+GGG + chr1_4:57008454-57008473 Msa0172070:intron 25.0%
! TCTATCTACTTGACTATATA+TGG + chr1_4:57008588-57008607 Msa0172070:intron 25.0%
! CTTTATATCAGGAAAAGAAA+AGG - chr1_4:57008712-57008731 None:intergenic 25.0%
!! ATTTGTTAACTAGTAGAGTT+TGG + chr1_4:57009115-57009134 Msa0172070:intron 25.0%
! AAATCCTATTGATGTAATTC+TGG + chr1_4:57009302-57009321 Msa0172070:intron 25.0%
! AATCCTATTGATGTAATTCT+GGG + chr1_4:57009303-57009322 Msa0172070:intron 25.0%
!!! CAAATTTTTTTTCCACATTG+AGG - chr1_4:57009405-57009424 None:intergenic 25.0%
! CTCAATGTGGAAAAAAAATT+TGG + chr1_4:57009403-57009422 Msa0172070:intron 25.0%
! CAATGTGGAAAAAAAATTTG+GGG + chr1_4:57009405-57009424 Msa0172070:intron 25.0%
! AATGTGGAAAAAAAATTTGG+GGG + chr1_4:57009406-57009425 Msa0172070:intron 25.0%
! TCAATTGTGTCAAGTATTAT+GGG - chr1_4:57009626-57009645 None:intergenic 25.0%
!! CAAAATTGCACATTTTCAAA+TGG + chr1_4:57009823-57009842 Msa0172070:intron 25.0%
! TGAAAGAAATAGAGAGAAAA+TGG + chr1_4:57009968-57009987 Msa0172070:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG + chr1_4:57010130-57010149 Msa0172070:intron 25.0%
! GCAACAAAACTATAAACAAT+AGG + chr1_4:57010130-57010149 Msa0172070:intron 25.0%
!! AGCAAATTGTATTTTACCAA+AGG + chr1_4:57010554-57010573 Msa0172070:intron 25.0%
!! GCAAATTGTATTTTACCAAA+GGG + chr1_4:57010555-57010574 Msa0172070:intron 25.0%
! ACATCTGTTATGATTTCTTT+AGG + chr1_4:57010878-57010897 Msa0172070:intron 25.0%
!!! TTTTCTTAAGTTTAAAACCG+CGG + chr1_4:57011473-57011492 Msa0172070:CDS 25.0%
!!! TAGACCATTAAAGGTTTTAA+AGG + chr1_4:57011560-57011579 Msa0172070:CDS 25.0%
! AAGAAATGAGAATAGTAAAG+TGG - chr1_4:57011904-57011923 None:intergenic 25.0%
!!! CAGATAAAGATTTTGAAAGA+TGG + chr1_4:57012321-57012340 Msa0172070:intron 25.0%
! TATCTTCACAATTGAGAAAT+GGG - chr1_4:57012476-57012495 None:intergenic 25.0%
! ATATCTTCACAATTGAGAAA+TGG - chr1_4:57012477-57012496 None:intergenic 25.0%
! AAGCTAAAAAATAACCAAGA+TGG + chr1_4:57013146-57013165 Msa0172070:CDS 25.0%
!! TATTTTCCTATTACTGTCAA+TGG - chr1_4:57013213-57013232 None:intergenic 25.0%
! AAAAACAATCTAAACAGCTT+AGG + chr1_4:57013432-57013451 Msa0172070:CDS 25.0%
! AAACCAAAAAATCACTCAAA+TGG + chr1_4:57013712-57013731 Msa0172070:intron 25.0%
ATGAAGAGAGAAAGAAAGAA+GGG - chr1_4:57004998-57005017 None:intergenic 30.0%
ATCATCATCATCATCATCAT+CGG + chr1_4:57005016-57005035 Msa0172070:five_prime_UTR 30.0%
CAAGAAAAACAAAGCAATGA+AGG + chr1_4:57005051-57005070 Msa0172070:CDS 30.0%
TGTTTCATGGTTACACAAAA+GGG + chr1_4:57005293-57005312 Msa0172070:CDS 30.0%
! GTTTTGTCAAATAACAGCTA+TGG + chr1_4:57005546-57005565 Msa0172070:intron 30.0%
!! TAAAAAGAGTTCGCCATTTT+TGG + chr1_4:57005849-57005868 Msa0172070:intron 30.0%
CAAATTGCAGTTACCAAAAA+TGG - chr1_4:57005865-57005884 None:intergenic 30.0%
AATACTAAACATGCTACTGT+TGG + chr1_4:57005911-57005930 Msa0172070:intron 30.0%
AGGAGAATATTGATATCATG+AGG + chr1_4:57005953-57005972 Msa0172070:intron 30.0%
!! CCGTAATCACAATATTTTGA+TGG + chr1_4:57006103-57006122 Msa0172070:intron 30.0%
! ATCTCTATCTGAAACAGAAT+TGG - chr1_4:57006370-57006389 None:intergenic 30.0%
CAAATCATCTGTACATCATT+CGG - chr1_4:57006407-57006426 None:intergenic 30.0%
AGAGTGAGAAAAGAAAACAA+GGG - chr1_4:57006447-57006466 None:intergenic 30.0%
AAGAGTGAGAAAAGAAAACA+AGG - chr1_4:57006448-57006467 None:intergenic 30.0%
CCAAAACTTTCACTTCTAAA+AGG - chr1_4:57006682-57006701 None:intergenic 30.0%
!! CCTTTTAGAAGTGAAAGTTT+TGG + chr1_4:57006679-57006698 Msa0172070:intron 30.0%
! CTGAAGTACTACTAAGAAAA+GGG - chr1_4:57006813-57006832 None:intergenic 30.0%
TTGATCTGATCCTTTCTTTA+TGG + chr1_4:57006891-57006910 Msa0172070:intron 30.0%
!!! CTATGTTTTTTTCTTTTGGC+AGG + chr1_4:57006970-57006989 Msa0172070:intron 30.0%
GTTGCTAGAACTGTTATATT+TGG + chr1_4:57006993-57007012 Msa0172070:CDS 30.0%
AATTGTTGAGTATGCTGATA+AGG + chr1_4:57007486-57007505 Msa0172070:intron 30.0%
TTATACTGCTTAGGATAGTA+AGG + chr1_4:57007611-57007630 Msa0172070:intron 30.0%
! GTAATTATGGTATTTTTCCC+AGG + chr1_4:57007633-57007652 Msa0172070:intron 30.0%
TTGCATAAAAAAGAGATAGG+AGG + chr1_4:57007738-57007757 Msa0172070:CDS 30.0%
TGCATAAAAAAGAGATAGGA+GGG + chr1_4:57007739-57007758 Msa0172070:CDS 30.0%
AAAAATAGGGAGTTACATCA+TGG + chr1_4:57008074-57008093 Msa0172070:intron 30.0%
AAAATAGGGAGTTACATCAT+GGG + chr1_4:57008075-57008094 Msa0172070:intron 30.0%
ATCTACAAACATGGGAAATT+AGG - chr1_4:57008157-57008176 None:intergenic 30.0%
! GTTGATAGAAATGTTGAACA+GGG - chr1_4:57008270-57008289 None:intergenic 30.0%
!! AGTTGATAGAAATGTTGAAC+AGG - chr1_4:57008271-57008290 None:intergenic 30.0%
AGTCAAGTAGATAGAAAACA+AGG - chr1_4:57008583-57008602 None:intergenic 30.0%
ACTTGACTATATATGGATAC+AGG + chr1_4:57008595-57008614 Msa0172070:intron 30.0%
AGGCCAAAGAAAATGAAATA+AGG + chr1_4:57008615-57008634 Msa0172070:intron 30.0%
GGCCAAAGAAAATGAAATAA+GGG + chr1_4:57008616-57008635 Msa0172070:intron 30.0%
!! GTCCCTTATTTCATTTTCTT+TGG - chr1_4:57008621-57008640 None:intergenic 30.0%
TTGCACGTTCATTCAAAAAA+TGG - chr1_4:57009207-57009226 None:intergenic 30.0%
AAAATGAATTGACACTTGTG+AGG - chr1_4:57009238-57009257 None:intergenic 30.0%
TTAAGCTCAAAGTTATGCAT+TGG - chr1_4:57009663-57009682 None:intergenic 30.0%
AAATACGGTCAAAGTAAGTT+AGG + chr1_4:57009799-57009818 Msa0172070:intron 30.0%
! TCACATTTGAGGTCTTAAAT+GGG - chr1_4:57009919-57009938 None:intergenic 30.0%
! ATTTAAGACCTCAAATGTGA+GGG + chr1_4:57009919-57009938 Msa0172070:intron 30.0%
AGCTACAAAATGTTCTATGA+AGG + chr1_4:57010442-57010461 Msa0172070:intron 30.0%
ACCACATATTGTTCTAATGT+CGG - chr1_4:57010794-57010813 None:intergenic 30.0%
!! GATTTCTTTAGGACAACAAA+AGG + chr1_4:57010889-57010908 Msa0172070:intron 30.0%
!! TAGTGATATTGATAGTGTTG+TGG + chr1_4:57010988-57011007 Msa0172070:CDS 30.0%
GTTATTTACAGATTCGTCTT+TGG - chr1_4:57011098-57011117 None:intergenic 30.0%
! TTAACAGTTTCCTTGGATTT+TGG - chr1_4:57011151-57011170 None:intergenic 30.0%
AAAATCCAAGGAAACTGTTA+AGG + chr1_4:57011150-57011169 Msa0172070:CDS 30.0%
AAATCCAAGGAAACTGTTAA+GGG + chr1_4:57011151-57011170 Msa0172070:CDS 30.0%
! AGAAATATCTGAAACCTTGT+CGG - chr1_4:57011203-57011222 None:intergenic 30.0%
ATCTAATTCAAAGGGAAGAT+TGG - chr1_4:57011281-57011300 None:intergenic 30.0%
TCTTCGGTATCTAATTCAAA+GGG - chr1_4:57011289-57011308 None:intergenic 30.0%
TTCTTCGGTATCTAATTCAA+AGG - chr1_4:57011290-57011309 None:intergenic 30.0%
!! ATATTGTTCTAGGACATACT+TGG - chr1_4:57011377-57011396 None:intergenic 30.0%
CACACACAAAATATTGTTCT+AGG - chr1_4:57011387-57011406 None:intergenic 30.0%
!! AGAGCCTTTAAAACCTTTAA+TGG - chr1_4:57011567-57011586 None:intergenic 30.0%
!!! ATTAAAGGTTTTAAAGGCTC+TGG + chr1_4:57011566-57011585 Msa0172070:CDS 30.0%
! CGCAAAAAGTGAGTATTTTA+TGG + chr1_4:57011824-57011843 Msa0172070:intron 30.0%
TGTATTTGATCTTCCATACT+TGG + chr1_4:57011937-57011956 Msa0172070:intron 30.0%
GTATTTGATCTTCCATACTT+GGG + chr1_4:57011938-57011957 Msa0172070:intron 30.0%
!!! TGTTTTTCAGTCATTGACTT+TGG - chr1_4:57012133-57012152 None:intergenic 30.0%
!! TAAAGATTTTGAAAGATGGC+AGG + chr1_4:57012325-57012344 Msa0172070:CDS 30.0%
AGAGTTCTTAACAATAATCC+TGG + chr1_4:57012435-57012454 Msa0172070:CDS 30.0%
! GCTTTGTTAAAATTGTCAAC+TGG + chr1_4:57012516-57012535 Msa0172070:intron 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG - chr1_4:57012543-57012562 None:intergenic 30.0%
!!! TTTTGGAAGCGTTCAATTTA+TGG - chr1_4:57012544-57012563 None:intergenic 30.0%
!! TTTGGAAGCGTTCAATTTAT+GGG - chr1_4:57012543-57012562 None:intergenic 30.0%
!!! TTTTGGAAGCGTTCAATTTA+TGG - chr1_4:57012544-57012563 None:intergenic 30.0%
ATAGTTCCATTGACAGTAAT+AGG + chr1_4:57013204-57013223 Msa0172070:CDS 30.0%
GACAGTAATAGGAAAATATC+AGG + chr1_4:57013215-57013234 Msa0172070:CDS 30.0%
ACTGAATCTTTGTTCTTCTT+TGG - chr1_4:57013320-57013339 None:intergenic 30.0%
AAGAAGAACAAAGATTCAGT+AGG + chr1_4:57013320-57013339 Msa0172070:CDS 30.0%
AGAAGAACAAAGATTCAGTA+GGG + chr1_4:57013321-57013340 Msa0172070:CDS 30.0%
AATCTAAACAGCTTAGGAAA+TGG + chr1_4:57013438-57013457 Msa0172070:CDS 30.0%
ACTTGAAATAACTCAAGATG+AGG - chr1_4:57013532-57013551 None:intergenic 30.0%
!!! TTCTCTCTTTGAGATTTTAG+TGG + chr1_4:57013602-57013621 Msa0172070:intron 30.0%
!!! ATGCCATTTGAGTGATTTTT+TGG - chr1_4:57013718-57013737 None:intergenic 30.0%
! GCATGAAGTTGATTAAAATG+TGG + chr1_4:57013734-57013753 Msa0172070:intron 30.0%
TCCATTGTTGCATAATAATG+CGG - chr1_4:57013800-57013819 None:intergenic 30.0%
GAATCGAAAAACCCTCATTA+TGG - chr1_4:57004956-57004975 None:intergenic 35.0%
GATGAAGAGAGAAAGAAAGA+AGG - chr1_4:57004999-57005018 None:intergenic 35.0%
TGAGAGTTAGTGAAGGAATA+GGG - chr1_4:57005139-57005158 None:intergenic 35.0%
GAACAAACTTTCAGTGAAGT+TGG + chr1_4:57005257-57005276 Msa0172070:CDS 35.0%
CTGTTTCATGGTTACACAAA+AGG + chr1_4:57005292-57005311 Msa0172070:CDS 35.0%
TTGTCAAATAACAGCTATGG+TGG + chr1_4:57005549-57005568 Msa0172070:intron 35.0%
ACGCTGATATAGCTACTATT+TGG - chr1_4:57005725-57005744 None:intergenic 35.0%
GTGGTGAGTATTAATCATTC+CGG - chr1_4:57005812-57005831 None:intergenic 35.0%
! TTTGGTAACTGCAATTTGTC+TGG + chr1_4:57005867-57005886 Msa0172070:intron 35.0%
GTTCACAAAGCTTAGTTAAG+AGG + chr1_4:57005933-57005952 Msa0172070:intron 35.0%
TCAAAAATTGTATCCCTCCT+CGG - chr1_4:57005980-57005999 None:intergenic 35.0%
GTGAACATAAAAAGACTACC+CGG - chr1_4:57006050-57006069 None:intergenic 35.0%
! TTTCGATCTTCGATTTTCAC+GGG - chr1_4:57006323-57006342 None:intergenic 35.0%
! GTTTCGATCTTCGATTTTCA+CGG - chr1_4:57006324-57006343 None:intergenic 35.0%
TGAAAATCGAAGATCGAAAC+CGG + chr1_4:57006324-57006343 Msa0172070:CDS 35.0%
TTCAGTTCCAAAAGAACCAA+AGG + chr1_4:57006562-57006581 Msa0172070:CDS 35.0%
TGGATAAACCGAAAAACTCA+AGG + chr1_4:57006699-57006718 Msa0172070:CDS 35.0%
!!! GCTGCTTTTTTTATTTCCAC+AGG - chr1_4:57006728-57006747 None:intergenic 35.0%
! GCTGAAGTACTACTAAGAAA+AGG - chr1_4:57006814-57006833 None:intergenic 35.0%
GCTAGAACTGTTATATTTGG+TGG + chr1_4:57006996-57007015 Msa0172070:CDS 35.0%
TGAAGATCATTCCTTGAAAG+GGG - chr1_4:57007098-57007117 None:intergenic 35.0%
CTGAAGATCATTCCTTGAAA+GGG - chr1_4:57007099-57007118 None:intergenic 35.0%
TTCATACACTAACCATGAGA+TGG - chr1_4:57007323-57007342 None:intergenic 35.0%
! GATGAGATAGTTTTCCAGTT+AGG + chr1_4:57007541-57007560 Msa0172070:intron 35.0%
!! TTCTTGATTTGCATCCTAAC+TGG - chr1_4:57007558-57007577 None:intergenic 35.0%
GCATAAAAAAGAGATAGGAG+GGG + chr1_4:57007740-57007759 Msa0172070:CDS 35.0%
CATAAAAAAGAGATAGGAGG+GGG + chr1_4:57007741-57007760 Msa0172070:CDS 35.0%
CCAAAAAGAAAACCCTTTCA+AGG - chr1_4:57008128-57008147 None:intergenic 35.0%
! CCTTGAAAGGGTTTTCTTTT+TGG + chr1_4:57008125-57008144 Msa0172070:intron 35.0%
ACGTATCAGAATCAGATACA+AGG - chr1_4:57008209-57008228 None:intergenic 35.0%
AAGGAATATATACCCTGTGT+CGG - chr1_4:57008693-57008712 None:intergenic 35.0%
GTATCGAAACGCTTTATATC+AGG - chr1_4:57008723-57008742 None:intergenic 35.0%
!! AAGTTTCCTGTTTCTGTTTC+AGG + chr1_4:57008925-57008944 Msa0172070:intron 35.0%
AAACTCAATGGATCGAAGTT+TGG + chr1_4:57008956-57008975 Msa0172070:CDS 35.0%
AACTCAATGGATCGAAGTTT+GGG + chr1_4:57008957-57008976 Msa0172070:CDS 35.0%
AGACCCAGAATTACATCAAT+AGG - chr1_4:57009309-57009328 None:intergenic 35.0%
CTGGGTCTTAGATTTATAGA+AGG + chr1_4:57009321-57009340 Msa0172070:intron 35.0%
! GGTCTTTAACATTTAAGACC+CGG + chr1_4:57009365-57009384 Msa0172070:intron 35.0%
TCGTAATCCACTTAAGATTG+GGG - chr1_4:57009462-57009481 None:intergenic 35.0%
GTCGTAATCCACTTAAGATT+GGG - chr1_4:57009463-57009482 None:intergenic 35.0%
CTCTATCAAGAGGTCTAAAT+GGG - chr1_4:57009558-57009577 None:intergenic 35.0%
TTGTGTCAAGTATTATGGGA+CGG - chr1_4:57009622-57009641 None:intergenic 35.0%
! CTCACATTTGAGGTCTTAAA+TGG - chr1_4:57009920-57009939 None:intergenic 35.0%
! CATTTAAGACCTCAAATGTG+AGG + chr1_4:57009918-57009937 Msa0172070:intron 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG - chr1_4:57010111-57010130 None:intergenic 35.0%
!! CGGTAGTTTGTAATTTGTTG+TGG - chr1_4:57010111-57010130 None:intergenic 35.0%
! CATTTTGTAGCTATGATGCA+TGG - chr1_4:57010434-57010453 None:intergenic 35.0%
TCTTACTGTTGTATGTGCAT+TGG - chr1_4:57010518-57010537 None:intergenic 35.0%
AACAAACAATAGTTGCCCTT+TGG - chr1_4:57010573-57010592 None:intergenic 35.0%
GCACATATTGTTCTAGTGTT+GGG - chr1_4:57010703-57010722 None:intergenic 35.0%
AGCACATATTGTTCTAGTGT+TGG - chr1_4:57010704-57010723 None:intergenic 35.0%
CCACATATTGTTCTAATGTC+GGG - chr1_4:57010793-57010812 None:intergenic 35.0%
ACTGACAAAGAATCTGATCA+AGG + chr1_4:57010959-57010978 Msa0172070:CDS 35.0%
!! TGATATTGATAGTGTTGTGG+AGG + chr1_4:57010991-57011010 Msa0172070:CDS 35.0%
TTGTCAAAATCATCGTCAGA+AGG - chr1_4:57011025-57011044 None:intergenic 35.0%
!! TTCTGACGATGATTTTGACA+AGG + chr1_4:57011024-57011043 Msa0172070:CDS 35.0%
! GTTCTTTTCTTCAGAAGACA+CGG - chr1_4:57011125-57011144 None:intergenic 35.0%
AAAGAACAAGCCAAAATCCA+AGG + chr1_4:57011138-57011157 Msa0172070:CDS 35.0%
CAAATCAACTTCTGTTTCCT+TGG - chr1_4:57011239-57011258 None:intergenic 35.0%
TATGGTAGCTGATATGCAAT+AGG + chr1_4:57011703-57011722 Msa0172070:intron 35.0%
!! TTTGCGTTTTGACATATCAG+TGG - chr1_4:57011810-57011829 None:intergenic 35.0%
ATAACTTTACCACCCAAGTA+TGG - chr1_4:57011953-57011972 None:intergenic 35.0%
AGATCACTACAATCAGTTAC+AGG - chr1_4:57012003-57012022 None:intergenic 35.0%
CCAAGCAAATACCTGTAATT+CGG + chr1_4:57012194-57012213 Msa0172070:CDS 35.0%
!! ATTTTGAAAGATGGCAGGAA+AGG + chr1_4:57012330-57012349 Msa0172070:CDS 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG - chr1_4:57012542-57012561 None:intergenic 35.0%
AAAATGTGTACGGAGAAAAC+TGG + chr1_4:57012594-57012613 Msa0172070:intron 35.0%
!! TTGGAAGCGTTCAATTTATG+GGG - chr1_4:57012542-57012561 None:intergenic 35.0%
ATTGCTAGCATTTCTATGTG+CGG + chr1_4:57012707-57012726 Msa0172070:intron 35.0%
CGTTACGAAGTTTCAATTTC+TGG - chr1_4:57012833-57012852 None:intergenic 35.0%
AAATGATAAACCCGACAATG+CGG + chr1_4:57012905-57012924 Msa0172070:CDS 35.0%
CCAGATTCAAATAGTGAACA+CGG + chr1_4:57012999-57013018 Msa0172070:CDS 35.0%
GCAAATCCAAAAGACAGAAA+GGG + chr1_4:57013057-57013076 Msa0172070:CDS 35.0%
CAAATCCAAAAGACAGAAAG+GGG + chr1_4:57013058-57013077 Msa0172070:CDS 35.0%
ACTTCGGTATTTGTACTCTT+GGG - chr1_4:57013086-57013105 None:intergenic 35.0%
TTCTTTCGATGAGATCACTT+CGG - chr1_4:57013102-57013121 None:intergenic 35.0%
AGAAAGTCCAAAAGCTTCTT+CGG + chr1_4:57013118-57013137 Msa0172070:CDS 35.0%
GTAATTTAGCACCATGATTC+TGG - chr1_4:57013172-57013191 None:intergenic 35.0%
! CATGGTGCTAAATTACATGA+AGG + chr1_4:57013176-57013195 Msa0172070:CDS 35.0%
AAGAAAGAAGACGCAGTATT+TGG + chr1_4:57013239-57013258 Msa0172070:CDS 35.0%
GAGAGAACGCTATTACAAAA+AGG - chr1_4:57013589-57013608 None:intergenic 35.0%
TCCGCATTATTATGCAACAA+TGG + chr1_4:57013796-57013815 Msa0172070:intron 35.0%
TCATGGTAACTAACATAGCA+CGG + chr1_4:57013884-57013903 Msa0172070:three_prime_UTR 35.0%
AAAAACCCTCATTATGGACC+GGG - chr1_4:57004950-57004969 None:intergenic 40.0%
GAAAAACCCTCATTATGGAC+CGG - chr1_4:57004951-57004970 None:intergenic 40.0%
ATGAAGGAAAATAGCGACGA+CGG + chr1_4:57005067-57005086 Msa0172070:CDS 40.0%
TAACGGCGGACATTGTTTAA+CGG - chr1_4:57005095-57005114 None:intergenic 40.0%
!! GAAACAAAGAGTGTTAACGG+CGG - chr1_4:57005109-57005128 None:intergenic 40.0%
CTGAGAGTTAGTGAAGGAAT+AGG - chr1_4:57005140-57005159 None:intergenic 40.0%
CTATTCCTTCACTAACTCTC+AGG + chr1_4:57005138-57005157 Msa0172070:CDS 40.0%
! TCTACACAACATCGTGGTTT+TGG + chr1_4:57005392-57005411 Msa0172070:CDS 40.0%
GAAATTCTGCTACGCTATAG+CGG - chr1_4:57005482-57005501 None:intergenic 40.0%
TACTTACAAAGATGGGGTTG+TGG - chr1_4:57005831-57005850 None:intergenic 40.0%
TATTGATATCATGAGGACCG+AGG + chr1_4:57005960-57005979 Msa0172070:intron 40.0%
GTGCTTGCTTCAATAGTATC+CGG + chr1_4:57006028-57006047 Msa0172070:intron 40.0%
TGCTTGCTTCAATAGTATCC+GGG + chr1_4:57006029-57006048 Msa0172070:intron 40.0%
! CGTGCTTCACTACAATTTTC+CGG - chr1_4:57006285-57006304 None:intergenic 40.0%
! TTCGATCTTCGATTTTCACG+GGG - chr1_4:57006322-57006341 None:intergenic 40.0%
AGCATCAATCAACCTTGATC+CGG - chr1_4:57006346-57006365 None:intergenic 40.0%
GTGAGAAAAGAAAACAAGGG+AGG - chr1_4:57006444-57006463 None:intergenic 40.0%
!! GATAAAGACAGCGGATTATC+TGG + chr1_4:57006524-57006543 Msa0172070:CDS 40.0%
!!! GGTTCTTTTGGAACTGAAAC+AGG - chr1_4:57006560-57006579 None:intergenic 40.0%
!!! CCTTCTTCCTTTGGTTCTTT+TGG - chr1_4:57006572-57006591 None:intergenic 40.0%
CCAAAAGAACCAAAGGAAGA+AGG + chr1_4:57006569-57006588 Msa0172070:CDS 40.0%
CAATCACAACCTTCTTCCTT+TGG - chr1_4:57006581-57006600 None:intergenic 40.0%
! ACAGGCTTCCTTGAGTTTTT+CGG - chr1_4:57006710-57006729 None:intergenic 40.0%
TTGTAATGACACAGCAGATG+AGG + chr1_4:57006751-57006770 Msa0172070:CDS 40.0%
TGTAATGACACAGCAGATGA+GGG + chr1_4:57006752-57006771 Msa0172070:CDS 40.0%
CTATTAAGCATCCCCTTTCA+AGG + chr1_4:57007084-57007103 Msa0172070:CDS 40.0%
GCTGAAGATCATTCCTTGAA+AGG - chr1_4:57007100-57007119 None:intergenic 40.0%
AACACGAAGTGCAACACAAT+GGG - chr1_4:57007297-57007316 None:intergenic 40.0%
!!! TTGTGCTGTTTTATGTGCTC+TGG + chr1_4:57007372-57007391 Msa0172070:intron 40.0%
GTGATAACTGCTAGCTGATT+AGG + chr1_4:57007865-57007884 Msa0172070:intron 40.0%
AAGCTTCCATTTCTGAGTCT+TGG - chr1_4:57008488-57008507 None:intergenic 40.0%
TGTCAGAAACCTTCCTTTCA+AGG + chr1_4:57008510-57008529 Msa0172070:CDS 40.0%
TCAACAGATCGAACCTTGAA+AGG - chr1_4:57008526-57008545 None:intergenic 40.0%
! ATTTTCAGCATCTTGCTTGC+AGG - chr1_4:57008835-57008854 None:intergenic 40.0%
! TCGTCTCATAGCTGTTGATT+GGG + chr1_4:57008982-57009001 Msa0172070:CDS 40.0%
!! AAATTACCTTCCTCTGAAGC+AGG - chr1_4:57009049-57009068 None:intergenic 40.0%
!! TAAGAGCATCCACATTGGTA+GGG + chr1_4:57009344-57009363 Msa0172070:intron 40.0%
TGTTAAAGACCCTACCAATG+TGG - chr1_4:57009356-57009375 None:intergenic 40.0%
! TTTAAGACCCGGTACCTAAT+AGG + chr1_4:57009376-57009395 Msa0172070:intron 40.0%
TTAAGACCCCCAATCTTAAG+TGG + chr1_4:57009452-57009471 Msa0172070:intron 40.0%
CGTAATCCACTTAAGATTGG+GGG - chr1_4:57009461-57009480 None:intergenic 40.0%
GGTCGTAATCCACTTAAGAT+TGG - chr1_4:57009464-57009483 None:intergenic 40.0%
CCTCTATCAAGAGGTCTAAA+TGG - chr1_4:57009559-57009578 None:intergenic 40.0%
CCATTTAGACCTCTTGATAG+AGG + chr1_4:57009556-57009575 Msa0172070:intron 40.0%
AATGGAGATCCTCTATCAAG+AGG - chr1_4:57009568-57009587 None:intergenic 40.0%
TCTTGATAGAGGATCTCCAT+TGG + chr1_4:57009567-57009586 Msa0172070:intron 40.0%
! ATGCATTGGCATGCGTAATA+AGG - chr1_4:57009649-57009668 None:intergenic 40.0%
AAAAAAGTGATGTGGCCATG+TGG + chr1_4:57009891-57009910 Msa0172070:intron 40.0%
GGCACAATACATCATGAAGA+AGG + chr1_4:57010278-57010297 Msa0172070:intron 40.0%
CAGTATGTACACATGTTCCT+GGG + chr1_4:57010621-57010640 Msa0172070:intron 40.0%
CCCGACATTAGAACAATATG+TGG + chr1_4:57010790-57010809 Msa0172070:intron 40.0%
CAAAAGGTGACAGATGAAGA+TGG + chr1_4:57010905-57010924 Msa0172070:CDS 40.0%
AGATGGTAGTACTACTACTG+AGG + chr1_4:57010922-57010941 Msa0172070:CDS 40.0%
AACATCTAAAGAGTCCGACA+AGG + chr1_4:57011186-57011205 Msa0172070:CDS 40.0%
TTCTAAGCCTGAAACTTCCA+AGG + chr1_4:57011219-57011238 Msa0172070:CDS 40.0%
TCTGTTTCCTTGGAAGTTTC+AGG - chr1_4:57011229-57011248 None:intergenic 40.0%
ATACCGAAGAAGTGAAGCAA+CGG + chr1_4:57011299-57011318 Msa0172070:CDS 40.0%
AAACCGTTGCTTCACTTCTT+CGG - chr1_4:57011305-57011324 None:intergenic 40.0%
! AAGCAACGGTTTTCTGCATT+TGG + chr1_4:57011313-57011332 Msa0172070:CDS 40.0%
ACTCCTCTATTACTCAATGC+AGG + chr1_4:57011433-57011452 Msa0172070:intron 40.0%
!!! TGGGATGGGTATTTTGGTAA+GGG + chr1_4:57011536-57011555 Msa0172070:CDS 40.0%
!! AAAGGCTCTGGACAAGAAAT+CGG + chr1_4:57011578-57011597 Msa0172070:CDS 40.0%
TAGGAGGGACTTATTCTTGA+CGG + chr1_4:57011758-57011777 Msa0172070:intron 40.0%
TTTGATCTTCCATACTTGGG+TGG + chr1_4:57011941-57011960 Msa0172070:intron 40.0%
CCGAATTACAGGTATTTGCT+TGG - chr1_4:57012197-57012216 None:intergenic 40.0%
!! ATTCGGCAGGTTGGTTAAAT+AGG + chr1_4:57012211-57012230 Msa0172070:intron 40.0%
ATTCAAGAAAAGCGACTCCA+CGG - chr1_4:57012383-57012402 None:intergenic 40.0%
! GGGTGTAATTGTTTGTTACC+AGG - chr1_4:57012456-57012475 None:intergenic 40.0%
TCATTGACCACAGAAACCTT+TGG + chr1_4:57012765-57012784 Msa0172070:intron 40.0%
AAACCTTTGGTCCTGAACAT+CGG + chr1_4:57012778-57012797 Msa0172070:CDS 40.0%
TCAAGAGCAAACTCCACAAT+TGG - chr1_4:57012804-57012823 None:intergenic 40.0%
AAAAGCTACAGTATCAGCAG+CGG + chr1_4:57012853-57012872 Msa0172070:CDS 40.0%
AATGATAAACCCGACAATGC+GGG + chr1_4:57012906-57012925 Msa0172070:CDS 40.0%
TGACAAACCAGCAAAAGACT+TGG + chr1_4:57012974-57012993 Msa0172070:CDS 40.0%
CCGTGTTCACTATTTGAATC+TGG - chr1_4:57013002-57013021 None:intergenic 40.0%
GATTCAAATAGTGAACACGG+TGG + chr1_4:57013002-57013021 Msa0172070:CDS 40.0%
! CCTTGAGGAGATTTTCCATT+TGG - chr1_4:57013035-57013054 None:intergenic 40.0%
CCAAATGGAAAATCTCCTCA+AGG + chr1_4:57013032-57013051 Msa0172070:CDS 40.0%
AATGGAAAATCTCCTCAAGG+AGG + chr1_4:57013035-57013054 Msa0172070:CDS 40.0%
GGCAAATCCAAAAGACAGAA+AGG + chr1_4:57013056-57013075 Msa0172070:CDS 40.0%
CTTCGGTATTTGTACTCTTG+GGG - chr1_4:57013085-57013104 None:intergenic 40.0%
CACTTCGGTATTTGTACTCT+TGG - chr1_4:57013087-57013106 None:intergenic 40.0%
! TTCCTTTCCGAAGAAGCTTT+TGG - chr1_4:57013128-57013147 None:intergenic 40.0%
AAGACGCAGTATTTGGAAAG+AGG + chr1_4:57013246-57013265 Msa0172070:CDS 40.0%
ATGCATAACCAAGAACAAGC+AGG + chr1_4:57013272-57013291 Msa0172070:CDS 40.0%
TGCATAACCAAGAACAAGCA+GGG + chr1_4:57013273-57013292 Msa0172070:CDS 40.0%
! GGGAAAAGGTTTCTAGGAAA+AGG + chr1_4:57013294-57013313 Msa0172070:CDS 40.0%
GAACAAAGATTCAGTAGGGA+AGG + chr1_4:57013325-57013344 Msa0172070:CDS 40.0%
TAGATCCAAGTTCTCACACA+AGG + chr1_4:57013385-57013404 Msa0172070:CDS 40.0%
AGATCCAAGTTCTCACACAA+GGG + chr1_4:57013386-57013405 Msa0172070:CDS 40.0%
AAGGGTTCTCAAGGAAATGA+CGG + chr1_4:57013404-57013423 Msa0172070:CDS 40.0%
GATGAGGCTCAAAAGAAGTA+GGG - chr1_4:57013516-57013535 None:intergenic 40.0%
AGATGAGGCTCAAAAGAAGT+AGG - chr1_4:57013517-57013536 None:intergenic 40.0%
GATTAAAATGTGGTTCGCAG+AGG + chr1_4:57013744-57013763 Msa0172070:intron 40.0%
GAGTACCTGAGAGTTAGTGA+AGG - chr1_4:57005146-57005165 None:intergenic 45.0%
TCAGTGAAGTTGGACCTGTT+AGG + chr1_4:57005267-57005286 Msa0172070:CDS 45.0%
GGGATGCTCATGTTAAACAG+CGG - chr1_4:57005591-57005610 None:intergenic 45.0%
CGATCTGCGATTGATTAGAC+CGG + chr1_4:57005790-57005809 Msa0172070:intron 45.0%
TATGTTCACTCTGCGTGTTG+TGG + chr1_4:57006061-57006080 Msa0172070:intron 45.0%
CTGCGTGTTGTGGTAATTTG+TGG + chr1_4:57006071-57006090 Msa0172070:intron 45.0%
CAAGCCATTGAGCTGAAGAA+CGG + chr1_4:57006244-57006263 Msa0172070:CDS 45.0%
TGAACCGTTCTTCAGCTCAA+TGG - chr1_4:57006251-57006270 None:intergenic 45.0%
TGAGCTGAAGAACGGTTCAT+TGG + chr1_4:57006252-57006271 Msa0172070:CDS 45.0%
CTGAAGAACGGTTCATTGGT+TGG + chr1_4:57006256-57006275 Msa0172070:CDS 45.0%
GATGCAATAGAGGGCAATGA+AGG + chr1_4:57006476-57006495 Msa0172070:intron 45.0%
GAAAAACTCAAGGAAGCCTG+TGG + chr1_4:57006709-57006728 Msa0172070:CDS 45.0%
GTAATGACACAGCAGATGAG+GGG + chr1_4:57006753-57006772 Msa0172070:CDS 45.0%
TAATGACACAGCAGATGAGG+GGG + chr1_4:57006754-57006773 Msa0172070:CDS 45.0%
TGGTCTCGTGAATTCTGCTA+TGG + chr1_4:57007016-57007035 Msa0172070:CDS 45.0%
AGGAATGATCTTCAGCAGCA+TGG + chr1_4:57007104-57007123 Msa0172070:CDS 45.0%
CAACACGAAGTGCAACACAA+TGG - chr1_4:57007298-57007317 None:intergenic 45.0%
! CAATGTTGCAACAGAAGCAC+GGG - chr1_4:57007721-57007740 None:intergenic 45.0%
GCAATGTTGCAACAGAAGCA+CGG - chr1_4:57007722-57007741 None:intergenic 45.0%
CTCGTCATAGAACACATCAG+AGG + chr1_4:57007803-57007822 Msa0172070:intron 45.0%
! TATGCGTCTAGAGCCTTGAA+AGG + chr1_4:57008112-57008131 Msa0172070:intron 45.0%
! ATGCGTCTAGAGCCTTGAAA+GGG + chr1_4:57008113-57008132 Msa0172070:intron 45.0%
!! TTTGTTGTTGTATGTGGGCC+AGG + chr1_4:57008459-57008478 Msa0172070:intron 45.0%
! TTGTTGTTGTATGTGGGCCA+GGG + chr1_4:57008460-57008479 Msa0172070:intron 45.0%
CAGATCGAACCTTGAAAGGA+AGG - chr1_4:57008522-57008541 None:intergenic 45.0%
! AAGGGACGCATTTTCATCTG+CGG + chr1_4:57008634-57008653 Msa0172070:CDS 45.0%
AAGACTGCACACAGGAAATG+AGG - chr1_4:57008784-57008803 None:intergenic 45.0%
TCCTGTGTGCAGTCTTTCAA+AGG + chr1_4:57008788-57008807 Msa0172070:intron 45.0%
CCTGTGTGCAGTCTTTCAAA+GGG + chr1_4:57008789-57008808 Msa0172070:intron 45.0%
GAATCGCCTGAAACAGAAAC+AGG - chr1_4:57008934-57008953 None:intergenic 45.0%
CAGGCGATTCGAAAACTCAA+TGG + chr1_4:57008944-57008963 Msa0172070:intron 45.0%
GTCGTCTCATAGCTGTTGAT+TGG + chr1_4:57008981-57009000 Msa0172070:CDS 45.0%
!! GAAGGTAAGAGCATCCACAT+TGG + chr1_4:57009339-57009358 Msa0172070:intron 45.0%
!! GTAAGAGCATCCACATTGGT+AGG + chr1_4:57009343-57009362 Msa0172070:intron 45.0%
!! TGAGGGTACCTATTAGGTAC+CGG - chr1_4:57009387-57009406 None:intergenic 45.0%
!! CCACATTGAGGGTACCTATT+AGG - chr1_4:57009393-57009412 None:intergenic 45.0%
CCTAATAGGTACCCTCAATG+TGG + chr1_4:57009390-57009409 Msa0172070:intron 45.0%
TTTGGGGGTCTCTTAAGACT+CGG + chr1_4:57009421-57009440 Msa0172070:intron 45.0%
ATAGAGGATCTCCATTGGAG+TGG + chr1_4:57009572-57009591 Msa0172070:intron 45.0%
TAGGTACTCAACCACTCCAA+TGG - chr1_4:57009586-57009605 None:intergenic 45.0%
GGAGTGGTTGAGTACCTATT+AGG + chr1_4:57009588-57009607 Msa0172070:intron 45.0%
GTCAAGTATTATGGGACGGA+GGG - chr1_4:57009618-57009637 None:intergenic 45.0%
TGTCAAGTATTATGGGACGG+AGG - chr1_4:57009619-57009638 None:intergenic 45.0%
! GGTCTTAAATGGGTTCCACA+TGG - chr1_4:57009909-57009928 None:intergenic 45.0%
AATGGAGACCCTCACATTTG+AGG - chr1_4:57009930-57009949 None:intergenic 45.0%
AAATGTGAGGGTCTCCATTG+TGG + chr1_4:57009931-57009950 Msa0172070:intron 45.0%
! GTCTCTTAGAGCATCCACAA+TGG - chr1_4:57009948-57009967 None:intergenic 45.0%
GAGATCACTGTTCTGGTGAA+GGG - chr1_4:57010307-57010326 None:intergenic 45.0%
TGAGATCACTGTTCTGGTGA+AGG - chr1_4:57010308-57010327 None:intergenic 45.0%
GGTGTCTGATAAGTATCCTG+TGG + chr1_4:57010365-57010384 Msa0172070:intron 45.0%
CTTCAGAAATGGACAACCAC+AGG - chr1_4:57010384-57010403 None:intergenic 45.0%
GCAGTATGTACACATGTTCC+TGG + chr1_4:57010620-57010639 Msa0172070:intron 45.0%
TACAGATTCGTCTTTGGCAG+AGG - chr1_4:57011092-57011111 None:intergenic 45.0%
TGCACCCTTAACAGTTTCCT+TGG - chr1_4:57011158-57011177 None:intergenic 45.0%
CTAGGACATACTTGGTCACT+TGG - chr1_4:57011369-57011388 None:intergenic 45.0%
ACGCCTGCATTGAGTAATAG+AGG - chr1_4:57011439-57011458 None:intergenic 45.0%
TTAAGAAAACCAGTCCCTCG+TGG - chr1_4:57011462-57011481 None:intergenic 45.0%
TCAACTGCCAATACTGCTTC+TGG + chr1_4:57011516-57011535 Msa0172070:CDS 45.0%
CAACTGCCAATACTGCTTCT+GGG + chr1_4:57011517-57011536 Msa0172070:CDS 45.0%
!!! TGCTTCTGGGATGGGTATTT+TGG + chr1_4:57011530-57011549 Msa0172070:CDS 45.0%
!!! CTGGGATGGGTATTTTGGTA+AGG + chr1_4:57011535-57011554 Msa0172070:CDS 45.0%
!!! GGGATGGGTATTTTGGTAAG+GGG + chr1_4:57011537-57011556 Msa0172070:CDS 45.0%
GGTAAGGGGTAGACCATTAA+AGG + chr1_4:57011551-57011570 Msa0172070:CDS 45.0%
! CAAGAAATCGGCTCATGACA+AGG + chr1_4:57011590-57011609 Msa0172070:CDS 45.0%
AGACCACCGCAATCTTTACT+TGG + chr1_4:57011641-57011660 Msa0172070:CDS 45.0%
CCTTCGCCAAGTAAAGATTG+CGG - chr1_4:57011650-57011669 None:intergenic 45.0%
GCAAATACCTGTAATTCGGC+AGG + chr1_4:57012198-57012217 Msa0172070:CDS 45.0%
ATACCTGTAATTCGGCAGGT+TGG + chr1_4:57012202-57012221 Msa0172070:intron 45.0%
TAACCAACCTGCCGAATTAC+AGG - chr1_4:57012208-57012227 None:intergenic 45.0%
GAAAGATGGCAGGAAAGGAA+AGG + chr1_4:57012335-57012354 Msa0172070:CDS 45.0%
TTCAAGAAAAGCGACTCCAC+GGG - chr1_4:57012382-57012401 None:intergenic 45.0%
TTCAGGACCAAAGGTTTCTG+TGG - chr1_4:57012775-57012794 None:intergenic 45.0%
AAAGCTACAGTATCAGCAGC+GGG + chr1_4:57012854-57012873 Msa0172070:CDS 45.0%
TTTCTGCTGTTGCCATTGTG+AGG - chr1_4:57012882-57012901 None:intergenic 45.0%
! CTTTTGGATTTGCCTCCTTG+AGG - chr1_4:57013050-57013069 None:intergenic 45.0%
GTCCAAAAGCTTCTTCGGAA+AGG + chr1_4:57013123-57013142 Msa0172070:CDS 45.0%
AACCAAGATGGCCAGAATCA+TGG + chr1_4:57013158-57013177 Msa0172070:CDS 45.0%
GCATAACCAAGAACAAGCAG+GGG + chr1_4:57013274-57013293 Msa0172070:CDS 45.0%
AAGCAGGGGAAAAGGTTTCT+AGG + chr1_4:57013288-57013307 Msa0172070:CDS 45.0%
AGAACCCTTGTGTGAGAACT+TGG - chr1_4:57013393-57013412 None:intergenic 45.0%
TTCTCACACAAGGGTTCTCA+AGG + chr1_4:57013395-57013414 Msa0172070:CDS 45.0%
!! TAAAAAAAAAAAATATTTCA+TGG - chr1_4:57006836-57006855 None:intergenic 5.0%
!!! TTTTATTTTTTTTTAATGTT+TGG + chr1_4:57006851-57006870 Msa0172070:intron 5.0%
!!! TTTATTTTTTTTTAATGTTT+GGG + chr1_4:57006852-57006871 Msa0172070:intron 5.0%
!! TGTTTAATTATAAAATAAAA+AGG - chr1_4:57007439-57007458 None:intergenic 5.0%
!!! TTGTTTATATTAAATTTTAA+TGG - chr1_4:57013929-57013948 None:intergenic 5.0%
CATCATCATCATCATCGGCG+AGG + chr1_4:57005021-57005040 Msa0172070:five_prime_UTR 50.0%
! ACCTGTTAGGCGCTGTTTCA+TGG + chr1_4:57005280-57005299 Msa0172070:CDS 50.0%
ACCATGAAACAGCGCCTAAC+AGG - chr1_4:57005284-57005303 None:intergenic 50.0%
TCAGGGTCTACACAACATCG+TGG + chr1_4:57005386-57005405 Msa0172070:intron 50.0%
TGATATCATGAGGACCGAGG+AGG + chr1_4:57005963-57005982 Msa0172070:intron 50.0%
GATATCATGAGGACCGAGGA+GGG + chr1_4:57005964-57005983 Msa0172070:intron 50.0%
CGTTCTTCAGCTCAATGGCT+TGG - chr1_4:57006246-57006265 None:intergenic 50.0%
!! ACGGTTCATTGGTTGGTGAC+CGG + chr1_4:57006263-57006282 Msa0172070:CDS 50.0%
! GATCTTCGATTTTCACGGGG+AGG - chr1_4:57006319-57006338 None:intergenic 50.0%
CGAAGATCGAAACCGGATCA+AGG + chr1_4:57006331-57006350 Msa0172070:CDS 50.0%
AATGACACAGCAGATGAGGG+GGG + chr1_4:57006755-57006774 Msa0172070:CDS 50.0%
!! ACACACAGTGCCGATTTCTC+TGG - chr1_4:57007063-57007082 None:intergenic 50.0%
CTTCGTGTTGAGCCATCTCA+TGG + chr1_4:57007308-57007327 Msa0172070:intron 50.0%
AGATAGGAGGGGGAACTGTT+TGG + chr1_4:57007751-57007770 Msa0172070:CDS 50.0%
GATAGGAGGGGGAACTGTTT+GGG + chr1_4:57007752-57007771 Msa0172070:CDS 50.0%
ACTTTACCTCCCCACCAAGT+TGG - chr1_4:57007782-57007801 None:intergenic 50.0%
ATTTCTGAGTCTTGGCTCCC+TGG - chr1_4:57008480-57008499 None:intergenic 50.0%
AGGGAGCCAAGACTCAGAAA+TGG + chr1_4:57008479-57008498 Msa0172070:intron 50.0%
! AGGGACGCATTTTCATCTGC+GGG + chr1_4:57008635-57008654 Msa0172070:CDS 50.0%
TTTCATCTGCGGGGACTGTA+TGG + chr1_4:57008645-57008664 Msa0172070:CDS 50.0%
TTCATCTGCGGGGACTGTAT+GGG + chr1_4:57008646-57008665 Msa0172070:CDS 50.0%
ATTCCACAGAAGTCCGACAC+AGG + chr1_4:57008677-57008696 Msa0172070:CDS 50.0%
TTCCACAGAAGTCCGACACA+GGG + chr1_4:57008678-57008697 Msa0172070:CDS 50.0%
! CCCTTTGAAAGACTGCACAC+AGG - chr1_4:57008792-57008811 None:intergenic 50.0%
!! CTCTGAAGCAGGAGCATCAT+TGG - chr1_4:57009038-57009057 None:intergenic 50.0%
CAATGATGCTCCTGCTTCAG+AGG + chr1_4:57009036-57009055 Msa0172070:CDS 50.0%
!! GAGGGTACCTATTAGGTACC+GGG - chr1_4:57009386-57009405 None:intergenic 50.0%
TTGGGGGTCTCTTAAGACTC+GGG + chr1_4:57009422-57009441 Msa0172070:intron 50.0%
GTCGTCTATTGCGAGACAGA+GGG + chr1_4:57009846-57009865 Msa0172070:intron 50.0%
TAACAGTGACCTCACCACGT+CGG + chr1_4:57010165-57010184 Msa0172070:intron 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG - chr1_4:57010182-57010201 None:intergenic 50.0%
ACGTGGTGAGATCACTGTTC+TGG - chr1_4:57010314-57010333 None:intergenic 50.0%
GAACAGTGATCTCACCACGT+CGG + chr1_4:57010314-57010333 Msa0172070:intron 50.0%
!!! ACTTTTTGGCTGTTCCGACG+TGG - chr1_4:57010182-57010201 None:intergenic 50.0%
GCGAGTACACGCTTCAGAAA+TGG - chr1_4:57010395-57010414 None:intergenic 50.0%
CGTGTACTCGCCTAAATCCA+GGG + chr1_4:57010404-57010423 Msa0172070:intron 50.0%
CCAGTGTCTTATACTCCTCC+CGG - chr1_4:57010484-57010503 None:intergenic 50.0%
! TTGGTCACTTGGTGGAGAAC+AGG - chr1_4:57011358-57011377 None:intergenic 50.0%
GGACATACTTGGTCACTTGG+TGG - chr1_4:57011366-57011385 None:intergenic 50.0%
TGCATTATCAGCTGCTTCCG+CGG - chr1_4:57011493-57011512 None:intergenic 50.0%
! TGCCAATACTGCTTCTGGGA+TGG + chr1_4:57011521-57011540 Msa0172070:CDS 50.0%
!! GCCAATACTGCTTCTGGGAT+GGG + chr1_4:57011522-57011541 Msa0172070:CDS 50.0%
ACCCATCCCAGAAGCAGTAT+TGG - chr1_4:57011526-57011545 None:intergenic 50.0%
! ATCGGCTCATGACAAGGAAC+AGG + chr1_4:57011596-57011615 Msa0172070:CDS 50.0%
TCGCCAAGTAAAGATTGCGG+TGG - chr1_4:57011647-57011666 None:intergenic 50.0%
CCGCAATCTTTACTTGGCGA+AGG + chr1_4:57011647-57011666 Msa0172070:CDS 50.0%
GCATATCAGCTACCATAGCC+TGG - chr1_4:57011700-57011719 None:intergenic 50.0%
ATCAGTGGCTGAAACCCCTT+CGG - chr1_4:57011795-57011814 None:intergenic 50.0%
CAAGAACAGCAGTATTCCCG+TGG + chr1_4:57012363-57012382 Msa0172070:CDS 50.0%
TCCTGAACATCGGCCAATTG+TGG + chr1_4:57012788-57012807 Msa0172070:CDS 50.0%
TCCACAATTGGCCGATGTTC+AGG - chr1_4:57012792-57012811 None:intergenic 50.0%
TGCGTAAACTCCCGCATTGT+CGG - chr1_4:57012919-57012938 None:intergenic 50.0%
AATGCGGGAGTTTACGCACA+TGG + chr1_4:57012921-57012940 Msa0172070:CDS 50.0%
!! TCTGGTGCCAAGTCTTTTGC+TGG - chr1_4:57012984-57013003 None:intergenic 50.0%
CACCATGATTCTGGCCATCT+TGG - chr1_4:57013163-57013182 None:intergenic 50.0%
! CCTTTTCCCCTGCTTGTTCT+TGG - chr1_4:57013283-57013302 None:intergenic 50.0%
CCAAGAACAAGCAGGGGAAA+AGG + chr1_4:57013280-57013299 Msa0172070:CDS 50.0%
ATCATCATCGGCGAGGCGAT+GGG + chr1_4:57005028-57005047 Msa0172070:exon 55.0%
GGCTTGGCGGTGAACATCTT+CGG - chr1_4:57007042-57007061 None:intergenic 55.0%
CACCGCCAAGCCAGAGAAAT+CGG + chr1_4:57007050-57007069 Msa0172070:CDS 55.0%
!! TGCCGATTTCTCTGGCTTGG+CGG - chr1_4:57007055-57007074 None:intergenic 55.0%
!! CAGTGCCGATTTCTCTGGCT+TGG - chr1_4:57007058-57007077 None:intergenic 55.0%
TTCCCAGGTCTGCTGCAAGA+AGG + chr1_4:57007648-57007667 Msa0172070:intron 55.0%
AGCCTTCTTGCAGCAGACCT+GGG - chr1_4:57007653-57007672 None:intergenic 55.0%
ACTGTTTGGGCACGCCAACT+TGG + chr1_4:57007765-57007784 Msa0172070:CDS 55.0%
TTTGGGCACGCCAACTTGGT+GGG + chr1_4:57007769-57007788 Msa0172070:CDS 55.0%
! GGGACGCATTTTCATCTGCG+GGG + chr1_4:57008636-57008655 Msa0172070:CDS 55.0%
TACCCTGTGTCGGACTTCTG+TGG - chr1_4:57008683-57008702 None:intergenic 55.0%
GATGCTCCTGCTTCAGAGGA+AGG + chr1_4:57009040-57009059 Msa0172070:CDS 55.0%
TGGGGGTCTCTTAAGACTCG+GGG + chr1_4:57009423-57009442 Msa0172070:intron 55.0%
!! GGACGGAGGGAGTACCTAAT+AGG - chr1_4:57009605-57009624 None:intergenic 55.0%
GGTCGTCTATTGCGAGACAG+AGG + chr1_4:57009845-57009864 Msa0172070:intron 55.0%
GCGTGTACTCGCCTAAATCC+AGG + chr1_4:57010403-57010422 Msa0172070:intron 55.0%
GCATGGACAGCCCTGGATTT+AGG - chr1_4:57010417-57010436 None:intergenic 55.0%
CTATGATGCATGGACAGCCC+TGG - chr1_4:57010424-57010443 None:intergenic 55.0%
AGGCAGCTAGACTGCACTAC+CGG + chr1_4:57010462-57010481 Msa0172070:intron 55.0%
! CCGGGAGGAGTATAAGACAC+TGG + chr1_4:57010481-57010500 Msa0172070:intron 55.0%
TCCTCTGTACCTCGTGTTCC+AGG + chr1_4:57011679-57011698 Msa0172070:intron 55.0%
GTACCTCGTGTTCCAGGCTA+TGG + chr1_4:57011685-57011704 Msa0172070:intron 55.0%
CTACCATAGCCTGGAACACG+AGG - chr1_4:57011691-57011710 None:intergenic 55.0%
TGGCCGATGTTCAGGACCAA+AGG - chr1_4:57012784-57012803 None:intergenic 55.0%
GCGTAAACTCCCGCATTGTC+GGG - chr1_4:57012918-57012937 None:intergenic 55.0%
! CACGGTGGTAGAGTGCCAAA+TGG + chr1_4:57013017-57013036 Msa0172070:CDS 55.0%
! GGGGTCCCCTTTCTGTCTTT+TGG - chr1_4:57013066-57013085 None:intergenic 55.0%
CATCATCATCGGCGAGGCGA+TGG + chr1_4:57005027-57005046 Msa0172070:exon 60.0%
! CGATTTTCACGGGGAGGACG+AGG - chr1_4:57006313-57006332 None:intergenic 60.0%
CAGCCTTCTTGCAGCAGACC+TGG - chr1_4:57007654-57007673 None:intergenic 60.0%
GTTTGGGCACGCCAACTTGG+TGG + chr1_4:57007768-57007787 Msa0172070:CDS 60.0%
! TTGGGCACGCCAACTTGGTG+GGG + chr1_4:57007770-57007789 Msa0172070:CDS 60.0%
ATCTGCGGGGACTGTATGGG+AGG + chr1_4:57008649-57008668 Msa0172070:CDS 60.0%
TTGGCTGTTCCGACGTGGTG+AGG - chr1_4:57010177-57010196 None:intergenic 60.0%
GGCAGCTAGACTGCACTACC+GGG + chr1_4:57010463-57010482 Msa0172070:intron 60.0%
AGCTAGACTGCACTACCGGG+AGG + chr1_4:57010466-57010485 Msa0172070:intron 60.0%
ACTCAATGCAGGCGTCCACG+AGG + chr1_4:57011444-57011463 Msa0172070:intron 60.0%
CTCAATGCAGGCGTCCACGA+GGG + chr1_4:57011445-57011464 Msa0172070:intron 60.0%
GCCTGGAACACGAGGTACAG+AGG - chr1_4:57011683-57011702 None:intergenic 60.0%
ACGGAACTCCAGCTGCCGAA+GGG + chr1_4:57011777-57011796 Msa0172070:CDS 60.0%
GACACAGCAGATGAGGGGGG+TGG + chr1_4:57006758-57006777 Msa0172070:CDS 65.0%
GACGGAACTCCAGCTGCCGA+AGG + chr1_4:57011776-57011795 Msa0172070:CDS 65.0%
CGGAACTCCAGCTGCCGAAG+GGG + chr1_4:57011778-57011797 Msa0172070:CDS 65.0%
GCTGAAACCCCTTCGGCAGC+TGG - chr1_4:57011788-57011807 None:intergenic 65.0%
! CAGCAGCGGGCTCCTCACAA+TGG + chr1_4:57012867-57012886 Msa0172070:CDS 65.0%
! GGCACGCCAACTTGGTGGGG+AGG + chr1_4:57007773-57007792 Msa0172070:CDS 70.0%
TGCAGGCGTCCACGAGGGAC+TGG + chr1_4:57011450-57011469 Msa0172070:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57004946 57014038 57004946 ID=Msa0172070;Name=Msa0172070
chr1_4 mRNA 57004946 57014038 57004946 ID=Msa0172070-mRNA-1;Parent=Msa0172070;Name=Msa0172070-mRNA-1;_AED=0.11;_eAED=0.11;_QI=100|1|1|1|0.94|0.89|19|264|964
chr1_4 exon 57004946 57005159 57004946 ID=Msa0172070-mRNA-1:exon:17359;Parent=Msa0172070-mRNA-1
chr1_4 exon 57005254 57005314 57005254 ID=Msa0172070-mRNA-1:exon:17360;Parent=Msa0172070-mRNA-1
chr1_4 exon 57005390 57005426 57005390 ID=Msa0172070-mRNA-1:exon:17361;Parent=Msa0172070-mRNA-1
chr1_4 exon 57006222 57006352 57006222 ID=Msa0172070-mRNA-1:exon:17362;Parent=Msa0172070-mRNA-1
chr1_4 exon 57006486 57006590 57006486 ID=Msa0172070-mRNA-1:exon:17363;Parent=Msa0172070-mRNA-1
chr1_4 exon 57006687 57006795 57006687 ID=Msa0172070-mRNA-1:exon:17364;Parent=Msa0172070-mRNA-1
chr1_4 exon 57006992 57007125 57006992 ID=Msa0172070-mRNA-1:exon:17365;Parent=Msa0172070-mRNA-1
chr1_4 exon 57007655 57007794 57007655 ID=Msa0172070-mRNA-1:exon:17366;Parent=Msa0172070-mRNA-1
chr1_4 exon 57008481 57008531 57008481 ID=Msa0172070-mRNA-1:exon:17367;Parent=Msa0172070-mRNA-1
chr1_4 exon 57008617 57008699 57008617 ID=Msa0172070-mRNA-1:exon:17368;Parent=Msa0172070-mRNA-1
chr1_4 exon 57008800 57008854 57008800 ID=Msa0172070-mRNA-1:exon:17369;Parent=Msa0172070-mRNA-1
chr1_4 exon 57008947 57009061 57008947 ID=Msa0172070-mRNA-1:exon:17370;Parent=Msa0172070-mRNA-1
chr1_4 exon 57010900 57011377 57010900 ID=Msa0172070-mRNA-1:exon:17371;Parent=Msa0172070-mRNA-1
chr1_4 exon 57011455 57011668 57011455 ID=Msa0172070-mRNA-1:exon:17372;Parent=Msa0172070-mRNA-1
chr1_4 exon 57011761 57011831 57011761 ID=Msa0172070-mRNA-1:exon:17373;Parent=Msa0172070-mRNA-1
chr1_4 exon 57012051 57012219 57012051 ID=Msa0172070-mRNA-1:exon:17374;Parent=Msa0172070-mRNA-1
chr1_4 exon 57012324 57012456 57012324 ID=Msa0172070-mRNA-1:exon:17375;Parent=Msa0172070-mRNA-1
chr1_4 exon 57012778 57013550 57012778 ID=Msa0172070-mRNA-1:exon:17376;Parent=Msa0172070-mRNA-1
chr1_4 exon 57013853 57014038 57013853 ID=Msa0172070-mRNA-1:exon:17377;Parent=Msa0172070-mRNA-1
chr1_4 five_prime_UTR 57004946 57005045 57004946 ID=Msa0172070-mRNA-1:five_prime_utr;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57005046 57005159 57005046 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57005254 57005314 57005254 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57005390 57005426 57005390 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57006222 57006352 57006222 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57006486 57006590 57006486 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57006687 57006795 57006687 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57006992 57007125 57006992 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57007655 57007794 57007655 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57008481 57008531 57008481 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57008617 57008699 57008617 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57008800 57008854 57008800 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57008947 57009061 57008947 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57010900 57011377 57010900 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57011455 57011668 57011455 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57011761 57011831 57011761 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57012051 57012219 57012051 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57012324 57012456 57012324 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 CDS 57012778 57013472 57012778 ID=Msa0172070-mRNA-1:cds;Parent=Msa0172070-mRNA-1
chr1_4 three_prime_UTR 57013473 57013550 57013473 ID=Msa0172070-mRNA-1:three_prime_utr;Parent=Msa0172070-mRNA-1
chr1_4 three_prime_UTR 57013853 57014038 57013853 ID=Msa0172070-mRNA-1:three_prime_utr;Parent=Msa0172070-mRNA-1
Gene Sequence

>Msa0172070

ATGGGCAAGAAAAACAAAGCAATGAAGGAAAATAGCGACGACGGCACCGTTAAACAATGTCCGCCGTTAACACTCTTTGTTTCTAATTTACCCTATTCCTTCACTAACTCTCAGCTTGAACAAACTTTCAGTGAAGTTGGACCTGTTAGGCGCTGTTTCATGGTTACACAAAAGGGGTCTACACAACATCGTGGTTTTGGTTATGTTCAATTTGCTGTTGAGAAAGACGCTAACCAAGCCATTGAGCTGAAGAACGGTTCATTGGTTGGTGACCGGAAAATTGTAGTGAAGCACGCAATGCCTCGTCCTCCCCGTGAAAATCGAAGATCGAAACCGGATCAAGAGGGCAATGAAGGCGATCTCACACAATCAAAAAATGATGATAAAGACAGCGGATTATCTGGAGCAGAGAAGCCTGTTTCAGTTCCAAAAGAACCAAAGGAAGAAGAAGTGAAAGTTTTGGATAAACCGAAAAACTCAAGGAAGCCTGTGGAAATAAAAAAAGCAGCACTTTGTAATGACACAGCAGATGAGGGGGGTGGCTCAGAAAAACAGAAGGTTGCTAGAACTGTTATATTTGGTGGTCTCGTGAATTCTGCTATGGCCGAAGATGTTCACCGCCAAGCCAGAGAAATCGGCACTGTGTGTTCTATTAAGCATCCCCTTTCAAGGAATGATCTTCAGCAGCATGGTCTGCTGCAAGAAGGCTGTACTTTCAATGCTTCAGCTGTACTTTATACAAGTGTAAAATCAGCCCGTGCTTCTGTTGCAACATTGCATAAAAAAGAGATAGGAGGGGGAACTGTTTGGGCACGCCAACTTGGTGGGGAGGGAGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCTTTCAAGGCCAAAGAAAATGAAATAAGGGACGCATTTTCATCTGCGGGGACTGTATGGGAGGTATTCATTCCACAGAAGTCCGACACAGGTCTTTCAAAGGGTTTTGCATTTGTAAAATTCACCTGCAAGCAAGATGCTGAAAATGCGATTCGAAAACTCAATGGATCGAAGTTTGGGAGTCGTCTCATAGCTGTTGATTGGGCTGTTCCAAAAAAGATATTTAGTAGTGATACCAATGATGCTCCTGCTTCAGAGGAAGGACAACAAAAGGTGACAGATGAAGATGGTAGTACTACTACTGAGGATGATCTTGAGAATACTGACAAAGAATCTGATCAAGGAGATGATAGTGATATTGATAGTGTTGTGGAGGAAGATGTTCCTTCTGACGATGATTTTGACAAGGAAGCAGACATTGCAAGAAAAGTTCTTAACAACTTGATTACATCCTCTGCCAAAGACGAATCTGTAAATAACGATTCCGTGTCTTCTGAAGAAAAGAACAAGCCAAAATCCAAGGAAACTGTTAAGGGTGCAGATAGTAAAACATCTAAAGAGTCCGACAAGGTTTCAGATATTTCTAAGCCTGAAACTTCCAAGGAAACAGAAGTTGATTTGCACAGAACAGTTTTTATAACCAATCTTCCCTTTGAATTAGATACCGAAGAAGTGAAGCAACGGTTTTCTGCATTTGGTGAAGTAGAATATTTTGCTCCTGTTCTCCACCAAGTGACCAAGCGTCCACGAGGGACTGGTTTTCTTAAGTTTAAAACCGCGGAAGCAGCTGATAATGCAATTTCAACTGCCAATACTGCTTCTGGGATGGGTATTTTGGTAAGGGGTAGACCATTAAAGGTTTTAAAGGCTCTGGACAAGAAATCGGCTCATGACAAGGAACAGGAGAAAGAAAAAAATGAAGTTCAAGACCACCGCAATCTTTACTTGGCGAAGGAGGGACTTATTCTTGACGGAACTCCAGCTGCCGAAGGGGTTTCAGCCACTGATATGTCAAAACGCAAAAATTTGGAAAGGAAAAAGAAGACGAAGCTTCAATCTCCAAATTTTCATGTTTCAAAAACTAGACTTGTTATCTACAACTTACCAAAGTCAATGACTGAAAAACAACTTAAGACGCTTTGCATTGATGCAGTCATCTCTAGAGCTACCAAGCAAATACCTGTAATTCGGCAGATAAAGATTTTGAAAGATGGCAGGAAAGGAAAGGCTACTCAAGAACAGCAGTATTCCCGTGGAGTCGCTTTTCTTGAATTTTCAGAGCATCAACATGCTCTTGTTGCTTTGAGAGTTCTTAACAATAATCCTGAAACCTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTCTTGATAATATCCAGAAATTGAAACTTCGTAACGAAAAGCTACAGTATCAGCAGCGGGCTCCTCACAATGGCAACAGCAGAAACGAAAATGATAAACCCGACAATGCGGGAGTTTACGCACATGGAACTGACAGAAAACGAAAATCTCGAGAGCATGACAAACCAGCAAAAGACTTGGCACCAGATTCAAATAGTGAACACGGTGGTAGAGTGCCAAATGGAAAATCTCCTCAAGGAGGCAAATCCAAAAGACAGAAAGGGGACCCCAAGAGTACAAATACCGAAGTGATCTCATCGAAAGAAAGTCCAAAAGCTTCTTCGGAAAGGAAGCTAAAAAATAACCAAGATGGCCAGAATCATGGTGCTAAATTACATGAAGGTAAAAATAGTTCCATTGACAGTAATAGGAAAATATCAGGTAAGAAAGAAGACGCAGTATTTGGAAAGAGGAAGATGCATAACCAAGAACAAGCAGGGGAAAAGGTTTCTAGGAAAAGGCCAAAGAAGAACAAAGATTCAGTAGGGAAGGACACAGTAGATAAGCTTGACATGCTTATAGAACAATATAGATCCAAGTTCTCACACAAGGGTTCTCAAGGAAATGACGGCGAGAAAAAACAATCTAAACAGCTTAGGAAATGGTTCCAATCATAA
Protein sequence

>Msa0172070

MGKKNKAMKENSDDGTVKQCPPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVEKDANQAIELKNGSLVGDRKIVVKHAMPRPPRENRRSKPDQEGNEGDLTQSKNDDKDSGLSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPVEIKKAALCNDTADEGGGSEKQKVARTVIFGGLVNSAMAEDVHRQAREIGTVCSIKHPLSRNDLQQHGLLQEGCTFNASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDGSTTTEDDLENTDKESDQGDDSDIDSVVEEDVPSDDDFDKEADIARKVLNNLITSSAKDESVNNDSVSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEVDLHRTVFITNLPFELDTEEVKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVRGRPLKVLKALDKKSAHDKEQEKEKNEVQDHRNLYLAKEGLILDGTPAAEGVSATDMSKRKNLERKKKTKLQSPNFHVSKTRLVIYNLPKSMTEKQLKTLCIDAVISRATKQIPVIRQIKILKDGRKGKATQEQQYSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNIQKLKLRNEKLQYQQRAPHNGNSRNENDKPDNAGVYAHGTDRKRKSREHDKPAKDLAPDSNSEHGGRVPNGKSPQGGKSKRQKGDPKSTNTEVISSKESPKASSERKLKNNQDGQNHGAKLHEGKNSSIDSNRKISGKKEDAVFGKRKMHNQEQAGEKVSRKRPKKNKDSVGKDTVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS*