AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0563020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563020 MtrunA17_Chr8g0376881 87.386 547 49 5 1 536 1 538 0.0 965
Msa0563020 MtrunA17_Chr3g0123131 61.606 573 160 11 12 536 1 561 0.0 640
Msa0563020 MtrunA17_Chr1g0161431 56.134 269 105 4 25 280 11 279 6.81e-91 291
Msa0563020 MtrunA17_Chr4g0067981 58.915 258 94 4 23 268 29 286 6.61e-89 287
Msa0563020 MtrunA17_Chr2g0294911 55.731 253 100 2 23 266 27 276 5.83e-85 275
Msa0563020 MtrunA17_Chr3g0137101 54.198 262 102 3 23 268 6 265 8.66e-84 273
Msa0563020 MtrunA17_Chr1g0149841 53.906 256 104 3 23 266 3 256 6.13e-78 253
Msa0563020 MtrunA17_Chr4g0074411 50.988 253 105 3 23 262 16 262 1.55e-74 247
Msa0563020 MtrunA17_Chr2g0304841 44.127 315 130 4 22 290 15 329 1.78e-72 244
Msa0563020 MtrunA17_Chr4g0074401 51.969 254 100 6 25 262 17 264 1.06e-71 239
Msa0563020 MtrunA17_Chr1g0149851 49.808 261 106 4 23 258 3 263 1.41e-67 227
Msa0563020 MtrunA17_Chr7g0275891 46.429 280 123 6 23 277 3 280 3.05e-66 218
Msa0563020 MtrunA17_Chr7g0275401 48.594 249 109 4 23 256 3 247 2.31e-64 211
Msa0563020 MtrunA17_Chr3g0134481 47.826 230 68 2 23 252 6 183 5.52e-58 191
Msa0563020 MtrunA17_Chr4g0009851 39.130 253 125 4 24 273 10 236 8.24e-56 189
Msa0563020 MtrunA17_Chr4g0009901 40.625 256 126 4 24 276 9 241 6.04e-55 186
Msa0563020 MtrunA17_Chr4g0074421 50.000 186 88 2 75 255 2 187 6.34e-54 181
Msa0563020 MtrunA17_Chr3g0134461 46.725 229 79 3 23 250 6 192 1.07e-50 172
Msa0563020 MtrunA17_Chr1g0149831 51.000 200 71 6 84 266 1 190 3.06e-48 167
Msa0563020 MtrunA17_Chr6g0471041 37.768 233 125 7 25 256 14 227 4.06e-42 155
Msa0563020 MtrunA17_Chr4g0009981 39.810 211 95 4 70 275 2 185 9.69e-42 150
Msa0563020 MtrunA17_Chr8g0391911 30.534 262 148 5 23 263 7 255 1.05e-32 125
Msa0563020 MtrunA17_Chr8g0383961 40.000 150 89 1 25 173 14 163 6.62e-28 112
Msa0563020 MtrunA17_Chr4g0011071 32.911 158 83 2 72 226 36 173 8.31e-25 101
Msa0563020 MtrunA17_Chr6g0473731 35.359 181 100 5 105 282 10 176 6.79e-24 104
Msa0563020 MtrunA17_Chr8g0350761 29.457 258 146 8 27 253 19 271 2.61e-23 103
Msa0563020 MtrunA17_Chr6g0456631 34.266 143 86 4 25 160 9 150 3.18e-23 96.7
Msa0563020 MtrunA17_Chr3g0127941 39.062 128 73 2 29 152 56 182 8.16e-22 99.4
Msa0563020 MtrunA17_Chr7g0276361 37.500 128 71 2 26 147 11 135 1.39e-20 95.5
Msa0563020 MtrunA17_Chr4g0009991 36.567 134 67 3 117 250 1 116 2.40e-19 84.0
Msa0563020 MtrunA17_Chr4g0030271 36.585 123 73 2 29 147 89 210 4.72e-19 90.9
Msa0563020 MtrunA17_Chr3g0091641 34.146 123 78 1 29 148 24 146 1.67e-18 89.0
Msa0563020 MtrunA17_Chr8g0345901 36.585 123 73 2 31 149 38 159 4.78e-18 87.8
Msa0563020 MtrunA17_Chr4g0061021 34.959 123 77 1 29 148 33 155 1.38e-17 85.9
Msa0563020 MtrunA17_Chr1g0181811 36.066 122 75 1 29 147 85 206 1.41e-17 86.3
Msa0563020 MtrunA17_Chr5g0423031 41.463 82 47 1 24 105 9 89 7.81e-17 78.6
Msa0563020 MtrunA17_Chr7g0223971 30.841 214 105 6 107 285 1 206 3.54e-16 81.3
Msa0563020 MtrunA17_Chr4g0031961 55.882 68 29 1 203 269 133 200 1.84e-15 77.4
Msa0563020 MtrunA17_Chr4g0010001 41.463 82 47 1 24 105 9 89 5.22e-15 70.5
Msa0563020 MtrunA17_Chr7g0255711 58.621 58 24 0 203 260 93 150 1.04e-14 75.1
Msa0563020 MtrunA17_Chr4g0054981 54.286 70 31 1 203 271 312 381 1.36e-13 73.6
Msa0563020 MtrunA17_Chr4g0054981 35.484 124 76 2 25 147 14 134 1.65e-13 73.2
Msa0563020 MtrunA17_Chr5g0400241 32.258 186 109 7 25 198 14 194 1.74e-13 73.2
Msa0563020 MtrunA17_Chr5g0400241 62.264 53 20 0 203 255 313 365 2.41e-13 72.4
Msa0563020 MtrunA17_Chr8g0352871 29.861 144 81 3 31 154 11 154 1.02e-12 66.6
Msa0563020 MtrunA17_Chr4g0059571 29.577 142 85 4 26 152 20 161 1.13e-12 67.4
Msa0563020 MtrunA17_Chr6g0469321 75.000 44 11 0 216 259 69 112 1.82e-12 65.9
Msa0563020 MtrunA17_Chr2g0324891 46.970 66 35 0 203 268 163 228 2.50e-12 68.9
Msa0563020 MtrunA17_Chr4g0040481 46.970 66 35 0 203 268 160 225 4.03e-12 68.2
Msa0563020 MtrunA17_Chr7g0256551 25.294 170 104 3 24 170 4 173 7.19e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0563020 AT1G67710.1 47.791 498 200 16 26 499 8 469 2.78e-120 364
Msa0563020 AT1G67710.2 43.636 440 188 16 84 499 1 404 7.37e-85 270
Msa0563020 AT3G16857.1 51.485 303 114 7 22 294 30 329 1.28e-82 271
Msa0563020 AT3G16857.2 51.485 303 114 7 22 294 30 329 3.24e-82 270
Msa0563020 AT2G01760.1 52.091 263 109 4 20 265 2 264 1.14e-79 254
Msa0563020 AT2G25180.1 53.571 252 109 2 22 266 10 260 1.79e-79 261
Msa0563020 AT2G01760.2 47.079 291 109 5 20 265 2 292 2.74e-73 239
Msa0563020 AT4G31920.1 50.965 259 105 5 22 272 10 254 5.85e-72 239
Msa0563020 AT1G67710.3 40.476 420 190 16 104 499 12 395 2.06e-68 227
Msa0563020 AT5G58080.1 49.402 251 121 3 23 268 12 261 5.85e-64 220
Msa0563020 AT3G16857.3 50.192 261 97 7 64 294 2 259 8.15e-64 219
Msa0563020 AT2G01760.3 50.251 199 82 4 84 265 1 199 7.03e-54 185
Msa0563020 AT5G49240.1 38.136 236 135 3 25 250 38 272 4.12e-44 158
Msa0563020 AT1G49190.1 33.463 257 148 5 22 260 27 278 4.63e-37 142
Msa0563020 AT5G07210.2 33.824 272 138 6 29 262 16 283 4.22e-35 139
Msa0563020 AT5G07210.1 32.857 280 138 8 29 262 16 291 2.30e-33 134
Msa0563020 AT3G62670.1 36.797 231 135 6 30 253 42 268 4.10e-32 128
Msa0563020 AT2G27070.1 31.419 296 142 7 29 275 16 299 8.23e-31 126
Msa0563020 AT1G49190.2 41.406 128 75 0 22 149 27 154 1.54e-26 114
Msa0563020 AT5G24470.1 38.400 125 72 2 28 148 49 172 1.16e-21 99.0
Msa0563020 AT2G46790.3 38.211 123 71 2 29 147 37 158 1.75e-21 97.8
Msa0563020 AT2G46790.1 38.211 123 71 2 29 147 37 158 1.97e-21 97.8
Msa0563020 AT1G68210.1 25.279 269 162 3 29 259 13 280 8.31e-21 97.1
Msa0563020 AT5G60100.7 39.855 138 77 3 29 162 64 199 4.40e-20 93.2
Msa0563020 AT5G60100.6 39.855 138 77 3 29 162 64 199 4.40e-20 93.2
Msa0563020 AT5G60100.4 39.855 138 77 3 29 162 64 199 4.40e-20 93.2
Msa0563020 AT5G60100.2 40.310 129 71 3 29 153 64 190 6.49e-20 93.6
Msa0563020 AT5G60100.5 39.855 138 77 3 29 162 64 199 7.55e-20 93.2
Msa0563020 AT5G60100.3 39.855 138 77 3 29 162 64 199 7.55e-20 93.2
Msa0563020 AT5G60100.1 39.855 138 77 3 29 162 64 199 7.55e-20 93.2
Msa0563020 AT5G61380.1 36.585 123 75 1 29 148 19 141 1.27e-18 89.7
Msa0563020 AT5G02810.1 38.211 123 71 2 29 147 78 199 5.82e-17 84.7
Msa0563020 AT3G46640.2 47.436 78 40 1 193 269 135 212 1.88e-15 78.2
Msa0563020 AT3G46640.1 47.436 78 40 1 193 269 135 212 1.88e-15 78.2
Msa0563020 AT3G46640.3 47.436 78 40 1 193 269 135 212 3.39e-15 77.4
Msa0563020 AT5G59570.2 58.621 58 24 0 203 260 143 200 3.65e-15 76.6
Msa0563020 AT5G59570.1 58.621 58 24 0 203 260 143 200 3.65e-15 76.6
Msa0563020 AT2G40970.1 58.621 58 24 0 203 260 107 164 4.51e-15 75.5
Msa0563020 AT3G10760.1 58.621 58 24 0 203 260 107 164 1.08e-14 75.9
Msa0563020 AT5G05090.1 44.554 101 53 2 203 303 83 180 2.16e-14 73.9
Msa0563020 AT2G20570.2 48.000 75 39 0 200 274 168 242 7.55e-14 74.3
Msa0563020 AT5G44190.2 49.315 73 37 0 203 275 149 221 9.80e-14 73.2
Msa0563020 AT5G44190.1 49.315 73 37 0 203 275 149 221 9.96e-14 73.6
Msa0563020 AT3G57040.2 28.931 159 90 4 31 167 11 168 1.06e-13 71.2
Msa0563020 AT3G57040.1 28.931 159 90 4 31 167 11 168 1.06e-13 71.2
Msa0563020 AT4G18020.3 50.725 69 34 0 197 265 292 360 2.41e-13 73.2
Msa0563020 AT4G18020.3 34.074 135 80 3 25 152 14 146 7.34e-13 71.6
Msa0563020 AT4G18020.2 50.725 69 34 0 197 265 292 360 2.41e-13 73.2
Msa0563020 AT4G18020.2 34.074 135 80 3 25 152 14 146 7.34e-13 71.6
Msa0563020 AT4G18020.1 50.725 69 34 0 197 265 292 360 2.41e-13 73.2
Msa0563020 AT4G18020.1 34.074 135 80 3 25 152 14 146 7.34e-13 71.6
Msa0563020 AT4G18020.6 50.725 69 34 0 197 265 292 360 2.41e-13 73.2
Msa0563020 AT4G18020.6 34.074 135 80 3 25 152 14 146 7.34e-13 71.6
Msa0563020 AT4G18020.9 50.725 69 34 0 197 265 292 360 2.41e-13 73.2
Msa0563020 AT4G18020.9 34.074 135 80 3 25 152 14 146 7.34e-13 71.6
Msa0563020 AT2G20570.1 48.611 72 37 0 203 274 155 226 2.41e-13 72.4
Msa0563020 AT4G18020.8 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.8 34.074 135 80 3 25 152 14 146 4.66e-13 72.0
Msa0563020 AT4G18020.11 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.11 34.074 135 80 3 25 152 14 146 4.66e-13 72.0
Msa0563020 AT4G18020.4 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.4 34.074 135 80 3 25 152 14 146 4.66e-13 72.0
Msa0563020 AT4G18020.5 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.5 34.074 135 80 3 25 152 14 146 4.66e-13 72.0
Msa0563020 AT4G18020.10 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.10 34.074 135 80 3 25 152 14 146 4.66e-13 72.0
Msa0563020 AT4G18020.7 50.725 69 34 0 197 265 292 360 2.63e-13 72.8
Msa0563020 AT4G18020.7 34.074 135 80 3 25 152 14 146 4.66e-13 72.0

Find 83 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAACTCTTTCTTATCTT+TGG 0.198401 4_1:-63334767 None:intergenic
TCTTGGTTGCATTTATGATA+TGG 0.215616 4_1:+63335159 Msa0563020:CDS
TGTTGCTGTGTAACATTTAA+TGG 0.220612 4_1:-63334944 None:intergenic
ATGAAAGTGATTGGTCAATT+TGG 0.229447 4_1:-63334970 None:intergenic
ATCATTTGAGATGAGGCTTT+TGG 0.254966 4_1:-63335080 None:intergenic
GAACACACTTGTACAATTAA+AGG 0.258335 4_1:+63334904 Msa0563020:CDS
ATTATTTGCTTAAGCCTATA+AGG 0.266042 4_1:+63330524 Msa0563020:CDS
CGCAATTCTTTCATCCTTAT+AGG 0.272142 4_1:-63330538 None:intergenic
TACCCAAAAGTAAGTTTCTT+TGG 0.274466 4_1:-63335189 None:intergenic
CTACCAAAGAAACTTACTTT+TGG 0.276715 4_1:+63335186 Msa0563020:CDS
TTTGAAGTTAAAATGATATC+AGG 0.326062 4_1:-63335109 None:intergenic
GAAGGTGCAATCGATAGTTT+TGG 0.347432 4_1:+63334662 Msa0563020:CDS
AAGTTCGATCTACAAGTTCT+TGG 0.348954 4_1:-63330741 None:intergenic
ATCTGCTGAAGCATACAAAT+TGG 0.351333 4_1:-63335353 None:intergenic
TGGAATTAAATGAAAGTGAT+TGG 0.371753 4_1:-63334979 None:intergenic
AAATGTTGCTAGTCACTTGC+AGG 0.372643 4_1:+63331077 Msa0563020:CDS
TGAGTCAGCTTCCACACCTT+TGG 0.373218 4_1:+63335213 Msa0563020:CDS
AATGTAATCATTCTTGTAAT+CGG 0.392849 4_1:-63335008 None:intergenic
GGAATTCACTTAATGAGAAA+TGG 0.405209 4_1:+63330625 Msa0563020:CDS
TTACTTCTGATTCCAGAGAT+TGG 0.407149 4_1:-63334802 None:intergenic
AAAACACCAAGATTTAATCT+TGG 0.410977 4_1:+63335142 Msa0563020:CDS
CACATGTTGCTTAGCAATAG+AGG 0.420963 4_1:+63330100 Msa0563020:CDS
CCATACCAACACAGTACTCT+TGG 0.432925 4_1:+63334846 Msa0563020:CDS
ATCGAATCCAAGTTGATTCA+CGG 0.433229 4_1:-63330819 None:intergenic
ATTCTTGTAATCGGAGGGAT+TGG 0.437838 4_1:-63334999 None:intergenic
CATATGCATCTTTACTTTCG+CGG 0.445631 4_1:-63330136 None:intergenic
AGCTTGAAACCATCCATGTC+AGG 0.458164 4_1:-63330185 None:intergenic
GGTAGGTCTTAACCAATCTC+TGG 0.459702 4_1:+63334790 Msa0563020:CDS
CATATTCACCTTGTAACAAA+AGG 0.468727 4_1:-63335252 None:intergenic
AAATGAACTTAATGAAGAAA+AGG 0.469526 4_1:+63330692 Msa0563020:CDS
AGCTTCCACACCTTTGGAAG+AGG 0.471642 4_1:+63335219 Msa0563020:CDS
ATGCAACCAAGATTAAATCT+TGG 0.480002 4_1:-63335148 None:intergenic
TGAAAGAATTGCGAAACATA+TGG 0.480046 4_1:+63330548 Msa0563020:CDS
GATTTACCTTCAAAAGATCC+AGG 0.483223 4_1:+63334599 Msa0563020:CDS
TTCAAGCTTCTTGAACATGT+TGG 0.489231 4_1:+63330200 Msa0563020:CDS
GTTAAAGCCGTGAATCAACT+TGG 0.490583 4_1:+63330812 Msa0563020:CDS
TTGAGAAAGCTTAAACATCC+TGG 0.491396 4_1:-63334617 None:intergenic
CAAACATCATGGTACACAAC+AGG 0.500098 4_1:+63329404 None:intergenic
TATGCAGTGATGTCTGTTGA+TGG 0.505268 4_1:+63330457 Msa0563020:intron
GGATCAGATCACACTGATGA+TGG 0.509373 4_1:+63330646 Msa0563020:CDS
ACGAGAACTCGTAGACCAGC+TGG 0.523070 4_1:-63329487 None:intergenic
CATTAGTCCTGTGAATTCAT+CGG 0.523463 4_1:+63335027 Msa0563020:CDS
TGAACATGTTGGACTTGAGA+TGG 0.525184 4_1:+63330211 Msa0563020:CDS
AAAATTCAAATGGATACTAC+AGG 0.527020 4_1:+63334704 Msa0563020:CDS
GAGATTGATCATTTGAGATG+AGG 0.529752 4_1:-63335087 None:intergenic
GTGTAACATTTAATGGCAAA+TGG 0.530650 4_1:-63334937 None:intergenic
GGAACTTCAGCAATAAACCT+TGG 0.534763 4_1:-63335328 None:intergenic
TAAAAGAACTTACTAATGAC+AGG 0.538868 4_1:-63330239 None:intergenic
GTGTTCTGTTCTTCTTCGAG+TGG 0.552522 4_1:-63334887 None:intergenic
CGATGTAAACATGCCTGACA+TGG 0.555999 4_1:+63330172 Msa0563020:CDS
GCAACCTACTCAAGTATAGC+CGG 0.557803 4_1:-63334529 None:intergenic
TAATCATTCTTGTAATCGGA+GGG 0.562863 4_1:-63335004 None:intergenic
TGGTGGAGTCAAATGCTGTA+TGG 0.564365 4_1:-63334826 None:intergenic
AAAGCATCAAGGTGTGGAGA+AGG 0.568756 4_1:-63329463 None:intergenic
CCAAGAGTACTGTGTTGGTA+TGG 0.569363 4_1:-63334846 None:intergenic
TAAGTCCTCTTCCAAAGGTG+TGG 0.571765 4_1:-63335224 None:intergenic
AATGATCAGAAATTGTCCTC+AGG 0.572148 4_1:+63334560 Msa0563020:CDS
GCTGAAGCATACAAATTGGT+AGG 0.582128 4_1:-63335349 None:intergenic
TCATTCCAAGAGTACTGTGT+TGG 0.583367 4_1:-63334851 None:intergenic
TGTCAGAGTATTATGATCCA+AGG 0.585355 4_1:+63335311 Msa0563020:CDS
CTGTTGATGGAGAAACAAGC+AGG 0.593651 4_1:+63330470 Msa0563020:CDS
GTGATGAAAGGTGTTCAACA+TGG 0.594525 4_1:+63330493 Msa0563020:CDS
GTAATCATTCTTGTAATCGG+AGG 0.596210 4_1:-63335005 None:intergenic
ATAAGAAAGAGTTCAGAGGT+AGG 0.597933 4_1:+63334773 Msa0563020:CDS
AGAGTACTGTGTTGGTATGG+TGG 0.600173 4_1:-63334843 None:intergenic
GACCAGCTGGAAAAGCATCA+AGG 0.602271 4_1:-63329474 None:intergenic
TTGTTGATGATGATCTAACT+TGG 0.602339 4_1:+63329509 Msa0563020:CDS
AAGTTTAAGTCCTCTTCCAA+AGG 0.602648 4_1:-63335229 None:intergenic
GAAGACACCGATGAATTCAC+AGG 0.619719 4_1:-63335034 None:intergenic
AATACCGGCTATACTTGAGT+AGG 0.620491 4_1:+63334525 Msa0563020:CDS
CTCTATTGCTAAGCAACATG+TGG 0.620636 4_1:-63330099 None:intergenic
AAAGATAAGAAAGAGTTCAG+AGG 0.625719 4_1:+63334769 Msa0563020:CDS
GAAACAAGCAGGGTGATGAA+AGG 0.627020 4_1:+63330481 Msa0563020:CDS
GCTGGAAAAGCATCAAGGTG+TGG 0.628160 4_1:-63329469 None:intergenic
GTCTCTTGTCTATGACAACA+TGG 0.628850 4_1:+63329426 Msa0563020:CDS
AAGAGAATTTGAAAGTCTCG+AGG 0.633493 4_1:+63330603 Msa0563020:CDS
TGAATGCTTTATTCTACCTG+AGG 0.641744 4_1:-63334576 None:intergenic
AAAGCGAGTAGTTTGGTCTG+TGG 0.648942 4_1:+63330772 Msa0563020:intron
TAGATTTGATGAATGTTCCG+TGG 0.652142 4_1:+63331043 Msa0563020:CDS
AGAGAATTTGAAAGTCTCGA+GGG 0.654792 4_1:+63330604 Msa0563020:CDS
TTCAACAAGCAACAAAACGA+AGG 0.664591 4_1:+63334644 Msa0563020:CDS
GTAAACATGCCTGACATGGA+TGG 0.678855 4_1:+63330176 Msa0563020:CDS
TGTTGATGGAGAAACAAGCA+GGG 0.723682 4_1:+63330471 Msa0563020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCTTTGAAAAAAAAAA+AGG - chr4_1:63329751-63329770 None:intergenic 10.0%
!!! AGTTTTTTTTAGTATAAATT+AGG - chr4_1:63329986-63330005 None:intergenic 10.0%
!!! TGATAAAAATAATTTCTTTT+TGG + chr4_1:63330996-63331015 Msa0563020:intron 10.0%
!!! ATTTTTTTAGCATTTTTTCA+AGG - chr4_1:63329543-63329562 None:intergenic 15.0%
!! TTTGAAAAAAAAAAAGGAAT+TGG - chr4_1:63329745-63329764 None:intergenic 15.0%
!!! TCTTTTAACTTAATTAACAA+AGG + chr4_1:63329851-63329870 Msa0563020:intron 15.0%
!!! TTTCTTAAATTTGCAAATTT+TGG + chr4_1:63330019-63330038 Msa0563020:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr4_1:63332138-63332157 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr4_1:63332137-63332156 Msa0563020:intron 15.0%
!!! AAGAGCAAAATTTTATTATT+AGG - chr4_1:63334501-63334520 None:intergenic 15.0%
!! AAATGAACTTAATGAAGAAA+AGG + chr4_1:63330692-63330711 Msa0563020:CDS 20.0%
!!! ATCAAATCTAGAATTTTCTT+GGG - chr4_1:63331033-63331052 None:intergenic 20.0%
!!! TAAACTTTTAACTTTAGTAG+AGG - chr4_1:63331123-63331142 None:intergenic 20.0%
!! AATGTAATCATTCTTGTAAT+CGG - chr4_1:63335011-63335030 None:intergenic 20.0%
!!! TTTGAAGTTAAAATGATATC+AGG - chr4_1:63335112-63335131 None:intergenic 20.0%
! TTGAATTGTACTGAACTTAT+TGG - chr4_1:63329669-63329688 None:intergenic 25.0%
! TAAAAGAACTTACTAATGAC+AGG - chr4_1:63330242-63330261 None:intergenic 25.0%
!!! TCTTCTAGCTTCTTTTTTTT+CGG - chr4_1:63330356-63330375 None:intergenic 25.0%
!! AAGTGTTGTTCGTAAAATAA+TGG - chr4_1:63330429-63330448 None:intergenic 25.0%
! ATTATTTGCTTAAGCCTATA+AGG + chr4_1:63330524-63330543 Msa0563020:CDS 25.0%
! CTTAAGAAAAAGAATACATG+AGG + chr4_1:63330579-63330598 Msa0563020:CDS 25.0%
!!! CATCAAATCTAGAATTTTCT+TGG - chr4_1:63331034-63331053 None:intergenic 25.0%
!!! AATATTTCTGAGATGTGTAT+TGG - chr4_1:63331229-63331248 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr4_1:63331394-63331413 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr4_1:63331401-63331420 Msa0563020:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr4_1:63331536-63331555 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr4_1:63332144-63332163 Msa0563020:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr4_1:63332145-63332164 Msa0563020:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr4_1:63332581-63332600 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr4_1:63332582-63332601 None:intergenic 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr4_1:63332583-63332602 Msa0563020:intron 25.0%
! ATCCTTCATTAAATAAGTTG+TGG + chr4_1:63332858-63332877 Msa0563020:intron 25.0%
! TTCCACAACTTATTTAATGA+AGG - chr4_1:63332863-63332882 None:intergenic 25.0%
! CTTATATTTATCCCAAGTTT+CGG + chr4_1:63333108-63333127 Msa0563020:intron 25.0%
!! TTCCATCTTAGATTTTTCAT+CGG - chr4_1:63333641-63333660 None:intergenic 25.0%
!! TTAGGAGAAAAGATTTTTCT+AGG - chr4_1:63333757-63333776 None:intergenic 25.0%
!! AGAAAAATCTTTTCTCCTAA+TGG + chr4_1:63333757-63333776 Msa0563020:intron 25.0%
! TTAATTCAGGATATTCCATT+AGG - chr4_1:63333775-63333794 None:intergenic 25.0%
!! ACACCTTAAAGTAAAGTTTT+GGG - chr4_1:63333812-63333831 None:intergenic 25.0%
!! AACACCTTAAAGTAAAGTTT+TGG - chr4_1:63333813-63333832 None:intergenic 25.0%
! AAGATATTGTGGATGTTAAA+AGG - chr4_1:63333927-63333946 None:intergenic 25.0%
! ATGTAGTGAAAAATAAGCAA+GGG - chr4_1:63334224-63334243 None:intergenic 25.0%
!!! TTTTGAGTTTGAAAACTTAC+AGG + chr4_1:63334473-63334492 Msa0563020:intron 25.0%
!!! ATAGTTTTGGATATTCAGAT+GGG + chr4_1:63334675-63334694 Msa0563020:CDS 25.0%
! TGGGACATTAAAAATTCAAA+TGG + chr4_1:63334694-63334713 Msa0563020:CDS 25.0%
! AAAATTCAAATGGATACTAC+AGG + chr4_1:63334704-63334723 Msa0563020:CDS 25.0%
! TGGAATTAAATGAAAGTGAT+TGG - chr4_1:63334982-63335001 None:intergenic 25.0%
! AAAACACCAAGATTTAATCT+TGG + chr4_1:63335142-63335161 Msa0563020:CDS 25.0%
!!! TACCAAAGAAACTTACTTTT+GGG + chr4_1:63335187-63335206 Msa0563020:CDS 25.0%
!! TTAAACTTCCTTTTGTTACA+AGG + chr4_1:63335244-63335263 Msa0563020:CDS 25.0%
!! TTGTTGATGATGATCTAACT+TGG + chr4_1:63329509-63329528 Msa0563020:CDS 30.0%
! CTAAAAAAATGCTTTTACCG+AGG + chr4_1:63329553-63329572 Msa0563020:CDS 30.0%
TGAATGAAAGAAAGAAACCT+CGG - chr4_1:63329573-63329592 None:intergenic 30.0%
!! TATATACCACTTTTAGCACA+TGG - chr4_1:63329616-63329635 None:intergenic 30.0%
ATTAGAAGCCAACAAAAATG+TGG - chr4_1:63329720-63329739 None:intergenic 30.0%
TGAAAGAATTGCGAAACATA+TGG + chr4_1:63330548-63330567 Msa0563020:CDS 30.0%
GGAATTCACTTAATGAGAAA+TGG + chr4_1:63330625-63330644 Msa0563020:CDS 30.0%
GTAGATTTATTTAGTGTGCT+TGG - chr4_1:63330902-63330921 None:intergenic 30.0%
CTCTTACACAAAAGATATGA+TGG - chr4_1:63330969-63330988 None:intergenic 30.0%
!! AATTTCTTTTTGGCAGAAGT+TGG + chr4_1:63331006-63331025 Msa0563020:intron 30.0%
!! TCTGATATGTTGTTTCTGTT+AGG + chr4_1:63331159-63331178 Msa0563020:intron 30.0%
TCTTTGATAGAACATTATGG+CGG - chr4_1:63331347-63331366 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr4_1:63331350-63331369 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr4_1:63331354-63331373 Msa0563020:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr4_1:63331389-63331408 Msa0563020:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr4_1:63331411-63331430 Msa0563020:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr4_1:63331540-63331559 Msa0563020:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr4_1:63331872-63331891 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr4_1:63331875-63331894 Msa0563020:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr4_1:63331947-63331966 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr4_1:63332126-63332145 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr4_1:63332187-63332206 Msa0563020:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr4_1:63332345-63332364 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr4_1:63332351-63332370 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr4_1:63332580-63332599 None:intergenic 30.0%
! AACTTTTCAACGAGATTATG+AGG - chr4_1:63332643-63332662 None:intergenic 30.0%
GGAACTATAACTATTATCGT+CGG - chr4_1:63332790-63332809 None:intergenic 30.0%
GACGATAATAGTTATAGTTC+CGG + chr4_1:63332789-63332808 Msa0563020:intron 30.0%
AAGTGTATTAAGGATGAAGA+AGG - chr4_1:63332935-63332954 None:intergenic 30.0%
GAAGGATTATACCAATCTTT+AGG - chr4_1:63333034-63333053 None:intergenic 30.0%
ATATAAGATAGCTAGGAAAG+AGG - chr4_1:63333095-63333114 None:intergenic 30.0%
GGGATAAATATAAGATAGCT+AGG - chr4_1:63333102-63333121 None:intergenic 30.0%
!!! AGAGAGATTGTTTTAGAGAT+TGG - chr4_1:63333150-63333169 None:intergenic 30.0%
TTCCAACACAAGATATTAGA+GGG - chr4_1:63333337-63333356 None:intergenic 30.0%
ATTCCAACACAAGATATTAG+AGG - chr4_1:63333338-63333357 None:intergenic 30.0%
ATTTAAAGGGTGACAAACAA+AGG - chr4_1:63333363-63333382 None:intergenic 30.0%
! AGATCGATTTCTTTCTCATT+AGG - chr4_1:63333534-63333553 None:intergenic 30.0%
! CTATAGCAAATACGTGTTTT+AGG - chr4_1:63333606-63333625 None:intergenic 30.0%
!! AGAAAAGATTTTTCTAGGAG+GGG - chr4_1:63333752-63333771 None:intergenic 30.0%
!! GAGAAAAGATTTTTCTAGGA+GGG - chr4_1:63333753-63333772 None:intergenic 30.0%
ATAAGCGCTAATTACGTTAA+AGG + chr4_1:63333855-63333874 Msa0563020:intron 30.0%
ATGTTAAAAGGATAGGAGAT+CGG - chr4_1:63333915-63333934 None:intergenic 30.0%
ATTGTGGATGTTAAAAGGAT+AGG - chr4_1:63333922-63333941 None:intergenic 30.0%
TTGGAATATAGGTACTCTTA+CGG - chr4_1:63334133-63334152 None:intergenic 30.0%
GATGTAGTGAAAAATAAGCA+AGG - chr4_1:63334225-63334244 None:intergenic 30.0%
CATTCACACTATTTCGTATT+TGG + chr4_1:63334325-63334344 Msa0563020:intron 30.0%
TTTATAAGATAATCCTGCCA+AGG - chr4_1:63334437-63334456 None:intergenic 30.0%
! ATTTTGCTCTTCAGAAATAC+CGG + chr4_1:63334510-63334529 Msa0563020:intron 30.0%
!!! GATAGTTTTGGATATTCAGA+TGG + chr4_1:63334674-63334693 Msa0563020:CDS 30.0%
TCTGAACTCTTTCTTATCTT+TGG - chr4_1:63334770-63334789 None:intergenic 30.0%
AAAGATAAGAAAGAGTTCAG+AGG + chr4_1:63334769-63334788 Msa0563020:CDS 30.0%
GAACACACTTGTACAATTAA+AGG + chr4_1:63334904-63334923 Msa0563020:CDS 30.0%
GTGTAACATTTAATGGCAAA+TGG - chr4_1:63334940-63334959 None:intergenic 30.0%
TGTTGCTGTGTAACATTTAA+TGG - chr4_1:63334947-63334966 None:intergenic 30.0%
! ATGAAAGTGATTGGTCAATT+TGG - chr4_1:63334973-63334992 None:intergenic 30.0%
TAATCATTCTTGTAATCGGA+GGG - chr4_1:63335007-63335026 None:intergenic 30.0%
ATGCAACCAAGATTAAATCT+TGG - chr4_1:63335151-63335170 None:intergenic 30.0%
TCTTGGTTGCATTTATGATA+TGG + chr4_1:63335159-63335178 Msa0563020:CDS 30.0%
! CTACCAAAGAAACTTACTTT+TGG + chr4_1:63335186-63335205 Msa0563020:CDS 30.0%
TACCCAAAAGTAAGTTTCTT+TGG - chr4_1:63335192-63335211 None:intergenic 30.0%
CATATTCACCTTGTAACAAA+AGG - chr4_1:63335255-63335274 None:intergenic 30.0%
! TCACCAATCCACATTTTTGT+TGG + chr4_1:63329709-63329728 Msa0563020:intron 35.0%
AAGCCAACAAAAATGTGGAT+TGG - chr4_1:63329715-63329734 None:intergenic 35.0%
! TACGACTCATGTGTCTTATT+TGG + chr4_1:63329923-63329942 Msa0563020:intron 35.0%
CATATGCATCTTTACTTTCG+CGG - chr4_1:63330139-63330158 None:intergenic 35.0%
TTCAAGCTTCTTGAACATGT+TGG + chr4_1:63330200-63330219 Msa0563020:CDS 35.0%
GTACCTACGAGTAATATTCT+TGG + chr4_1:63330329-63330348 Msa0563020:intron 35.0%
CGCAATTCTTTCATCCTTAT+AGG - chr4_1:63330541-63330560 None:intergenic 35.0%
AAGAGAATTTGAAAGTCTCG+AGG + chr4_1:63330603-63330622 Msa0563020:CDS 35.0%
AGAGAATTTGAAAGTCTCGA+GGG + chr4_1:63330604-63330623 Msa0563020:CDS 35.0%
AAGTTCGATCTACAAGTTCT+TGG - chr4_1:63330744-63330763 None:intergenic 35.0%
CATAAAGAAAGCGAGTAGTT+TGG + chr4_1:63330765-63330784 Msa0563020:intron 35.0%
!! ATCGAATCCAAGTTGATTCA+CGG - chr4_1:63330822-63330841 None:intergenic 35.0%
TAGATTTGATGAATGTTCCG+TGG + chr4_1:63331043-63331062 Msa0563020:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr4_1:63331370-63331389 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr4_1:63331382-63331401 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr4_1:63331466-63331485 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr4_1:63331469-63331488 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr4_1:63331470-63331489 Msa0563020:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr4_1:63331522-63331541 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr4_1:63331527-63331546 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr4_1:63331547-63331566 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr4_1:63331599-63331618 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr4_1:63331734-63331753 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr4_1:63331738-63331757 Msa0563020:intron 35.0%
TACATCATCGTATTCAAGCT+GGG - chr4_1:63331812-63331831 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr4_1:63331845-63331864 Msa0563020:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - chr4_1:63331873-63331892 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr4_1:63331874-63331893 Msa0563020:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr4_1:63331876-63331895 Msa0563020:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr4_1:63331887-63331906 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr4_1:63331938-63331957 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr4_1:63331939-63331958 None:intergenic 35.0%
TAGAAACAAGACGGAGTATA+TGG - chr4_1:63331967-63331986 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr4_1:63332080-63332099 Msa0563020:intron 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr4_1:63332188-63332207 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr4_1:63332256-63332275 Msa0563020:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr4_1:63332445-63332464 None:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr4_1:63332446-63332465 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr4_1:63332471-63332490 None:intergenic 35.0%
TACCATGAAGTTATGGGAAA+GGG - chr4_1:63332510-63332529 None:intergenic 35.0%
ATACCATGAAGTTATGGGAA+AGG - chr4_1:63332511-63332530 None:intergenic 35.0%
GAGTCATACCATGAAGTTAT+GGG - chr4_1:63332516-63332535 None:intergenic 35.0%
TGAGTCATACCATGAAGTTA+TGG - chr4_1:63332517-63332536 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr4_1:63332552-63332571 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr4_1:63332553-63332572 None:intergenic 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr4_1:63332579-63332598 None:intergenic 35.0%
TAACTATTATCGTCGGATTC+AGG - chr4_1:63332783-63332802 None:intergenic 35.0%
AGAGAGATATTAAGGATCGA+TGG - chr4_1:63332895-63332914 None:intergenic 35.0%
GGTACAAGAGAGAGATATTA+AGG - chr4_1:63332903-63332922 None:intergenic 35.0%
CATCCTTAATACACTTCACT+TGG + chr4_1:63332939-63332958 Msa0563020:intron 35.0%
TCTATATACAAGCTTGCGAA+GGG - chr4_1:63332992-63333011 None:intergenic 35.0%
ATCTATATACAAGCTTGCGA+AGG - chr4_1:63332993-63333012 None:intergenic 35.0%
ATACCAATCTTTAGGTACCA+AGG - chr4_1:63333026-63333045 None:intergenic 35.0%
GTGTAAAAATGCCGAAACTT+GGG - chr4_1:63333122-63333141 None:intergenic 35.0%
AGTGTAAAAATGCCGAAACT+TGG - chr4_1:63333123-63333142 None:intergenic 35.0%
ACAGTGTTCAGAGTAAAGTT+CGG - chr4_1:63333177-63333196 None:intergenic 35.0%
TAATGATATATGGGAGAGGA+TGG - chr4_1:63333287-63333306 None:intergenic 35.0%
!! TGGAAGCGCTAATGATATAT+GGG - chr4_1:63333296-63333315 None:intergenic 35.0%
!! ATGGAAGCGCTAATGATATA+TGG - chr4_1:63333297-63333316 None:intergenic 35.0%
ATCAAGTGGTGGCATTTAAA+GGG - chr4_1:63333376-63333395 None:intergenic 35.0%
AATCAAGTGGTGGCATTTAA+AGG - chr4_1:63333377-63333396 None:intergenic 35.0%
!! AGTAATGGTGATGGATGTAA+GGG - chr4_1:63333443-63333462 None:intergenic 35.0%
CATCACCATTACTCTATGTT+GGG + chr4_1:63333450-63333469 Msa0563020:intron 35.0%
AACTACCCAACATAGAGTAA+TGG - chr4_1:63333458-63333477 None:intergenic 35.0%
TTAGACTGTAAAGTCATACC+TGG - chr4_1:63333490-63333509 None:intergenic 35.0%
TTCTCATTAGGAAAACAGAC+AGG - chr4_1:63333522-63333541 None:intergenic 35.0%
ATCTCATCACTTACAAGAGT+GGG - chr4_1:63333570-63333589 None:intergenic 35.0%
!!! TACGTGTTTTAGGAAAAGAG+AGG - chr4_1:63333596-63333615 None:intergenic 35.0%
AGCCGATGAAAAATCTAAGA+TGG + chr4_1:63333636-63333655 Msa0563020:intron 35.0%
! GGAGAAAAGATTTTTCTAGG+AGG - chr4_1:63333754-63333773 None:intergenic 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG - chr4_1:63333809-63333828 None:intergenic 35.0%
CCTCCCAAAACTTTACTTTA+AGG + chr4_1:63333806-63333825 Msa0563020:intron 35.0%
TTGTTCCACTACACACTTTA+AGG + chr4_1:63333882-63333901 Msa0563020:intron 35.0%
! TATAGCCTTAAAGTGTGTAG+TGG - chr4_1:63333890-63333909 None:intergenic 35.0%
CGAAGTTAGATCAAGAAATG+GGG - chr4_1:63333980-63333999 None:intergenic 35.0%
GCGAAGTTAGATCAAGAAAT+GGG - chr4_1:63333981-63334000 None:intergenic 35.0%
ATAGTTCAGGATTTAAGCTG+TGG - chr4_1:63334011-63334030 None:intergenic 35.0%
AAGTAGTAGACACTATGACT+AGG - chr4_1:63334098-63334117 None:intergenic 35.0%
TACTCTTACGGGTAAATCTA+TGG - chr4_1:63334121-63334140 None:intergenic 35.0%
TGGAATATAGGTACTCTTAC+GGG - chr4_1:63334132-63334151 None:intergenic 35.0%
!!! CGTTTTGGAACTTGGAATAT+AGG - chr4_1:63334144-63334163 None:intergenic 35.0%
!! GCTTATTTTTCACTACATCC+AGG + chr4_1:63334226-63334245 Msa0563020:intron 35.0%
! TATTTTTCACTACATCCAGG+CGG + chr4_1:63334229-63334248 Msa0563020:intron 35.0%
TACGAAATAGTGTGAATGCT+AGG - chr4_1:63334323-63334342 None:intergenic 35.0%
TTTGTCGAATCTCTATGACA+TGG - chr4_1:63334352-63334371 None:intergenic 35.0%
! GATTCGACAAAGTTTTACGT+TGG + chr4_1:63334361-63334380 Msa0563020:intron 35.0%
AATGATCAGAAATTGTCCTC+AGG + chr4_1:63334560-63334579 Msa0563020:CDS 35.0%
! TGAATGCTTTATTCTACCTG+AGG - chr4_1:63334579-63334598 None:intergenic 35.0%
GATTTACCTTCAAAAGATCC+AGG + chr4_1:63334599-63334618 Msa0563020:CDS 35.0%
! AAACATCCTGGATCTTTTGA+AGG - chr4_1:63334608-63334627 None:intergenic 35.0%
TTGAGAAAGCTTAAACATCC+TGG - chr4_1:63334620-63334639 None:intergenic 35.0%
TTCAACAAGCAACAAAACGA+AGG + chr4_1:63334644-63334663 Msa0563020:CDS 35.0%
ATAAGAAAGAGTTCAGAGGT+AGG + chr4_1:63334773-63334792 Msa0563020:CDS 35.0%
TTACTTCTGATTCCAGAGAT+TGG - chr4_1:63334805-63334824 None:intergenic 35.0%
GTAATCATTCTTGTAATCGG+AGG - chr4_1:63335008-63335027 None:intergenic 35.0%
CATTAGTCCTGTGAATTCAT+CGG + chr4_1:63335027-63335046 Msa0563020:CDS 35.0%
!! ATCATTTGAGATGAGGCTTT+TGG - chr4_1:63335083-63335102 None:intergenic 35.0%
! GAGATTGATCATTTGAGATG+AGG - chr4_1:63335090-63335109 None:intergenic 35.0%
AAGTTTAAGTCCTCTTCCAA+AGG - chr4_1:63335232-63335251 None:intergenic 35.0%
! TGTCAGAGTATTATGATCCA+AGG + chr4_1:63335311-63335330 Msa0563020:CDS 35.0%
ATCTGCTGAAGCATACAAAT+TGG - chr4_1:63335356-63335375 None:intergenic 35.0%
GTCTCTTGTCTATGACAACA+TGG + chr4_1:63329426-63329445 Msa0563020:CDS 40.0%
CTTCTTCCATGTGCTAAAAG+TGG + chr4_1:63329607-63329626 Msa0563020:intron 40.0%
ACTAACCAATAACGCTAGCT+AGG + chr4_1:63329808-63329827 Msa0563020:intron 40.0%
CTAGGATGAGATGATAGTAC+TGG + chr4_1:63329826-63329845 Msa0563020:intron 40.0%
! TAGTCTTAATAGCTGCGTGA+TGG + chr4_1:63329956-63329975 Msa0563020:intron 40.0%
AGTCTTAATAGCTGCGTGAT+GGG + chr4_1:63329957-63329976 Msa0563020:intron 40.0%
CTCTATTGCTAAGCAACATG+TGG - chr4_1:63330102-63330121 None:intergenic 40.0%
! CACATGTTGCTTAGCAATAG+AGG + chr4_1:63330100-63330119 Msa0563020:CDS 40.0%
TGAACATGTTGGACTTGAGA+TGG + chr4_1:63330211-63330230 Msa0563020:CDS 40.0%
!! TATTACTCGTAGGTACTGAC+TGG - chr4_1:63330325-63330344 None:intergenic 40.0%
GGACCAAGAATATTACTCGT+AGG - chr4_1:63330335-63330354 None:intergenic 40.0%
TATGCAGTGATGTCTGTTGA+TGG + chr4_1:63330457-63330476 Msa0563020:intron 40.0%
! TGTTGATGGAGAAACAAGCA+GGG + chr4_1:63330471-63330490 Msa0563020:CDS 40.0%
!! GTGATGAAAGGTGTTCAACA+TGG + chr4_1:63330493-63330512 Msa0563020:CDS 40.0%
!! GATGGTAACATGTTTGCTGT+AGG + chr4_1:63330664-63330683 Msa0563020:intron 40.0%
GTTAAAGCCGTGAATCAACT+TGG + chr4_1:63330812-63330831 Msa0563020:CDS 40.0%
! ACATTTTCTCTAGTCAGCCA+CGG - chr4_1:63331063-63331082 None:intergenic 40.0%
AAATGTTGCTAGTCACTTGC+AGG + chr4_1:63331077-63331096 Msa0563020:CDS 40.0%
!! ACTACTAGCCTTCTAGTTCT+AGG - chr4_1:63331185-63331204 None:intergenic 40.0%
TAGAACTAGAAGGCTAGTAG+TGG + chr4_1:63331184-63331203 Msa0563020:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr4_1:63331441-63331460 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr4_1:63331572-63331591 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr4_1:63331573-63331592 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr4_1:63331574-63331593 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr4_1:63331605-63331624 None:intergenic 40.0%
! AAGGTACCACTTAAGCTGAA+AGG - chr4_1:63331747-63331766 None:intergenic 40.0%
! AGGTGTTTTGTGCGATAAGA+AGG - chr4_1:63331766-63331785 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr4_1:63331813-63331832 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr4_1:63331852-63331871 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr4_1:63331908-63331927 Msa0563020:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr4_1:63331915-63331934 None:intergenic 40.0%
TAACAATAGGACTGCACCAA+GGG - chr4_1:63332175-63332194 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr4_1:63332176-63332195 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr4_1:63332175-63332194 Msa0563020:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr4_1:63332176-63332195 Msa0563020:intron 40.0%
GCTATCCAGGATATGTATGA+GGG - chr4_1:63332248-63332267 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr4_1:63332249-63332268 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr4_1:63332261-63332280 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr4_1:63332305-63332324 Msa0563020:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr4_1:63332313-63332332 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr4_1:63332442-63332461 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr4_1:63332441-63332460 Msa0563020:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr4_1:63332458-63332477 None:intergenic 40.0%
TACCCTTTCCCATAACTTCA+TGG + chr4_1:63332505-63332524 Msa0563020:intron 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr4_1:63332551-63332570 None:intergenic 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr4_1:63332575-63332594 Msa0563020:intron 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG - chr4_1:63332692-63332711 None:intergenic 40.0%
! AGACTTTTCCACACTTCGAT+AGG + chr4_1:63332692-63332711 Msa0563020:intron 40.0%
ACAACATACCTATCGAAGTG+TGG - chr4_1:63332703-63332722 None:intergenic 40.0%
ACTTCGATAGGTATGTTGTC+CGG + chr4_1:63332704-63332723 Msa0563020:intron 40.0%
GAAAAGGATGAGTAATGGCA+AGG - chr4_1:63332738-63332757 None:intergenic 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - chr4_1:63332743-63332762 None:intergenic 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - chr4_1:63332754-63332773 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG - chr4_1:63332819-63332838 None:intergenic 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + chr4_1:63332824-63332843 Msa0563020:intron 40.0%
AGATCTTACCAGACTCTAAC+AGG - chr4_1:63332835-63332854 None:intergenic 40.0%
! GGATGAAGAAGGTAGAGTTT+TGG - chr4_1:63332924-63332943 None:intergenic 40.0%
GGACCAAGTGAAGTGTATTA+AGG - chr4_1:63332945-63332964 None:intergenic 40.0%
TAATACACTTCACTTGGTCC+AGG + chr4_1:63332945-63332964 Msa0563020:intron 40.0%
AATCTTTAGGTACCAAGGAG+GGG - chr4_1:63333021-63333040 None:intergenic 40.0%
CAATCTTTAGGTACCAAGGA+GGG - chr4_1:63333022-63333041 None:intergenic 40.0%
!!! ATCTAGAGGTTTTGGACCTA+GGG - chr4_1:63333224-63333243 None:intergenic 40.0%
!!! AATCTAGAGGTTTTGGACCT+AGG - chr4_1:63333225-63333244 None:intergenic 40.0%
! TTGGGAGAATCTAGAGGTTT+TGG - chr4_1:63333232-63333251 None:intergenic 40.0%
GATGGCTCATGAGATTAAGA+AGG - chr4_1:63333269-63333288 None:intergenic 40.0%
ATATCATTAGCGCTTCCATG+TGG + chr4_1:63333298-63333317 Msa0563020:intron 40.0%
AGATATTAGAGGGAGGTTTC+AGG - chr4_1:63333327-63333346 None:intergenic 40.0%
CAACACAAGATATTAGAGGG+AGG - chr4_1:63333334-63333353 None:intergenic 40.0%
CTCCCTCTAATATCTTGTGT+TGG + chr4_1:63333332-63333351 Msa0563020:intron 40.0%
! TGATGGATGTAAGGGTTAAG+AGG - chr4_1:63333435-63333454 None:intergenic 40.0%
!! GAGTAATGGTGATGGATGTA+AGG - chr4_1:63333444-63333463 None:intergenic 40.0%
CCAACATAGAGTAATGGTGA+TGG - chr4_1:63333452-63333471 None:intergenic 40.0%
CCATCACCATTACTCTATGT+TGG + chr4_1:63333449-63333468 Msa0563020:intron 40.0%
TGTAAAGTCATACCTGGTGA+GGG - chr4_1:63333484-63333503 None:intergenic 40.0%
GAAATCGATCTGAGAACAAG+AGG + chr4_1:63333543-63333562 Msa0563020:intron 40.0%
TCTCATCACTTACAAGAGTG+GGG - chr4_1:63333569-63333588 None:intergenic 40.0%
CATCTCATCACTTACAAGAG+TGG - chr4_1:63333571-63333590 None:intergenic 40.0%
! TTCTAGGAGGGGATTTGAAT+GGG - chr4_1:63333741-63333760 None:intergenic 40.0%
! TTTCTAGGAGGGGATTTGAA+TGG - chr4_1:63333742-63333761 None:intergenic 40.0%
GGAGCTAGAAGGATTAATTC+AGG - chr4_1:63333788-63333807 None:intergenic 40.0%
TGTTCTTCTAATCCTACCTG+AGG + chr4_1:63333829-63333848 Msa0563020:intron 40.0%
GGAGTGGAAGAAAGATATTG+TGG - chr4_1:63333938-63333957 None:intergenic 40.0%
GTTAGATCAAGAAATGGGGT+AGG - chr4_1:63333976-63333995 None:intergenic 40.0%
GGCGAAGTTAGATCAAGAAA+TGG - chr4_1:63333982-63334001 None:intergenic 40.0%
AGGATTTAAGCTGTGGTACA+CGG - chr4_1:63334004-63334023 None:intergenic 40.0%
GCGAGAGAATTAGATAGTTC+AGG - chr4_1:63334024-63334043 None:intergenic 40.0%
TACAAGAAACTAAGTGGGTG+GGG - chr4_1:63334053-63334072 None:intergenic 40.0%
CTACAAGAAACTAAGTGGGT+GGG - chr4_1:63334054-63334073 None:intergenic 40.0%
GTGCCTACAAGAAACTAAGT+GGG - chr4_1:63334058-63334077 None:intergenic 40.0%
TGTGCCTACAAGAAACTAAG+TGG - chr4_1:63334059-63334078 None:intergenic 40.0%
TAGTAGACACTATGACTAGG+AGG - chr4_1:63334095-63334114 None:intergenic 40.0%
!!! GTAGGATTCGTTTTGGAACT+TGG - chr4_1:63334152-63334171 None:intergenic 40.0%
! CATGAGAGTAGGATTCGTTT+TGG - chr4_1:63334159-63334178 None:intergenic 40.0%
AGAAGCTAGTTCATGAGAGT+AGG - chr4_1:63334170-63334189 None:intergenic 40.0%
GTACAGTGTCAAATGAGCAA+GGG - chr4_1:63334266-63334285 None:intergenic 40.0%
AGTACAGTGTCAAATGAGCA+AGG - chr4_1:63334267-63334286 None:intergenic 40.0%
! AATACCGGCTATACTTGAGT+AGG + chr4_1:63334525-63334544 Msa0563020:CDS 40.0%
!! GAAGGTGCAATCGATAGTTT+TGG + chr4_1:63334662-63334681 Msa0563020:CDS 40.0%
!! TCATTCCAAGAGTACTGTGT+TGG - chr4_1:63334854-63334873 None:intergenic 40.0%
ATTCTTGTAATCGGAGGGAT+TGG - chr4_1:63335002-63335021 None:intergenic 40.0%
GGAACTTCAGCAATAAACCT+TGG - chr4_1:63335331-63335350 None:intergenic 40.0%
GCTGAAGCATACAAATTGGT+AGG - chr4_1:63335352-63335371 None:intergenic 40.0%
! AAAGCATCAAGGTGTGGAGA+AGG - chr4_1:63329466-63329485 None:intergenic 45.0%
CTCATCCTAGCTAGCGTTAT+TGG - chr4_1:63329816-63329835 None:intergenic 45.0%
CGATGTAAACATGCCTGACA+TGG + chr4_1:63330172-63330191 Msa0563020:CDS 45.0%
GTAAACATGCCTGACATGGA+TGG + chr4_1:63330176-63330195 Msa0563020:CDS 45.0%
AGCTTGAAACCATCCATGTC+AGG - chr4_1:63330188-63330207 None:intergenic 45.0%
! CTGTTGATGGAGAAACAAGC+AGG + chr4_1:63330470-63330489 Msa0563020:CDS 45.0%
GAAACAAGCAGGGTGATGAA+AGG + chr4_1:63330481-63330500 Msa0563020:CDS 45.0%
GGATCAGATCACACTGATGA+TGG + chr4_1:63330646-63330665 Msa0563020:CDS 45.0%
AAAGCGAGTAGTTTGGTCTG+TGG + chr4_1:63330772-63330791 Msa0563020:intron 45.0%
CTGTTAGGCCTAGAACTAGA+AGG + chr4_1:63331174-63331193 Msa0563020:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_1:63331300-63331319 Msa0563020:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_1:63331301-63331320 Msa0563020:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr4_1:63331447-63331466 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr4_1:63331457-63331476 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr4_1:63331571-63331590 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr4_1:63331652-63331671 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr4_1:63331655-63331674 Msa0563020:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr4_1:63331691-63331710 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr4_1:63331692-63331711 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr4_1:63331696-63331715 Msa0563020:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr4_1:63331700-63331719 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + chr4_1:63331767-63331786 Msa0563020:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr4_1:63331786-63331805 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr4_1:63331800-63331819 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr4_1:63331809-63331828 None:intergenic 45.0%
!! ACTCCGTCTTGTTTCTACTC+AGG + chr4_1:63331970-63331989 Msa0563020:intron 45.0%
TAAATGGGAGGCTAGAGACT+TGG - chr4_1:63332025-63332044 None:intergenic 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG - chr4_1:63332040-63332059 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr4_1:63332065-63332084 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr4_1:63332093-63332112 Msa0563020:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr4_1:63332303-63332322 None:intergenic 45.0%
CGAAGAAAATGCCAAACGAG+TGG - chr4_1:63332619-63332638 None:intergenic 45.0%
TGGAAAAGTCTTGGCGATAG+AGG - chr4_1:63332683-63332702 None:intergenic 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - chr4_1:63332730-63332749 None:intergenic 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - chr4_1:63332731-63332750 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG - chr4_1:63332966-63332985 None:intergenic 45.0%
TATAGATTTCTCCCCCTCCT+TGG + chr4_1:63333006-63333025 Msa0563020:intron 45.0%
ATCTTTAGGTACCAAGGAGG+GGG - chr4_1:63333020-63333039 None:intergenic 45.0%
CCAATCTTTAGGTACCAAGG+AGG - chr4_1:63333023-63333042 None:intergenic 45.0%
CCTCCTTGGTACCTAAAGAT+TGG + chr4_1:63333020-63333039 Msa0563020:intron 45.0%
GCGAGAACTCAAGCATTTGA+AGG - chr4_1:63333052-63333071 None:intergenic 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG - chr4_1:63333083-63333102 None:intergenic 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG - chr4_1:63333086-63333105 None:intergenic 45.0%
CTAGGGGTAAAGAATCTTGG+TGG - chr4_1:63333207-63333226 None:intergenic 45.0%
CACCAAGATTCTTTACCCCT+AGG + chr4_1:63333205-63333224 Msa0563020:intron 45.0%
GACCTAGGGGTAAAGAATCT+TGG - chr4_1:63333210-63333229 None:intergenic 45.0%
!!! TCTAGAGGTTTTGGACCTAG+GGG - chr4_1:63333223-63333242 None:intergenic 45.0%
AAGGTGGCAAAAGAGACGTT+GGG - chr4_1:63333250-63333269 None:intergenic 45.0%
GGCTCATGAGATTAAGAAGG+TGG - chr4_1:63333266-63333285 None:intergenic 45.0%
GCGCTAATGATATATGGGAG+AGG - chr4_1:63333291-63333310 None:intergenic 45.0%
! AAATGCCACCACTTGATTCG+CGG + chr4_1:63333379-63333398 Msa0563020:intron 45.0%
GGATGTAAGGGTTAAGAGGA+GGG - chr4_1:63333431-63333450 None:intergenic 45.0%
TGGATGTAAGGGTTAAGAGG+AGG - chr4_1:63333432-63333451 None:intergenic 45.0%
CTGTAAAGTCATACCTGGTG+AGG - chr4_1:63333485-63333504 None:intergenic 45.0%
TTTGAATGGGCATGTAGGGA+GGG - chr4_1:63333728-63333747 None:intergenic 45.0%
ATTTGAATGGGCATGTAGGG+AGG - chr4_1:63333729-63333748 None:intergenic 45.0%
GGGATTTGAATGGGCATGTA+GGG - chr4_1:63333732-63333751 None:intergenic 45.0%
!!! AAGTTTTGGGAGGAGCTAGA+AGG - chr4_1:63333799-63333818 None:intergenic 45.0%
AATTAGCGCTTATGCACCTC+AGG - chr4_1:63333848-63333867 None:intergenic 45.0%
GCATCATTGTGGATAAGGAG+TGG - chr4_1:63333954-63333973 None:intergenic 45.0%
GGTAGGCATCATTGTGGATA+AGG - chr4_1:63333959-63333978 None:intergenic 45.0%
AAATGGGGTAGGCATCATTG+TGG - chr4_1:63333965-63333984 None:intergenic 45.0%
GGATTTAAGCTGTGGTACAC+GGG - chr4_1:63334003-63334022 None:intergenic 45.0%
AACTAAGTGGGTGGGGAAAA+AGG - chr4_1:63334046-63334065 None:intergenic 45.0%
CCTACAAGAAACTAAGTGGG+TGG - chr4_1:63334055-63334074 None:intergenic 45.0%
CCACCCACTTAGTTTCTTGT+AGG + chr4_1:63334052-63334071 Msa0563020:intron 45.0%
TAGACACTATGACTAGGAGG+AGG - chr4_1:63334092-63334111 None:intergenic 45.0%
!! AAGTTTTACGTTGGCTGTCG+AGG + chr4_1:63334370-63334389 Msa0563020:intron 45.0%
TAAGATAATCCTGCCAAGGC+CGG - chr4_1:63334433-63334452 None:intergenic 45.0%
GCAACCTACTCAAGTATAGC+CGG - chr4_1:63334532-63334551 None:intergenic 45.0%
GGTAGGTCTTAACCAATCTC+TGG + chr4_1:63334790-63334809 Msa0563020:CDS 45.0%
TGGTGGAGTCAAATGCTGTA+TGG - chr4_1:63334829-63334848 None:intergenic 45.0%
!! AGAGTACTGTGTTGGTATGG+TGG - chr4_1:63334846-63334865 None:intergenic 45.0%
!! CCAAGAGTACTGTGTTGGTA+TGG - chr4_1:63334849-63334868 None:intergenic 45.0%
CCATACCAACACAGTACTCT+TGG + chr4_1:63334846-63334865 Msa0563020:CDS 45.0%
GTGTTCTGTTCTTCTTCGAG+TGG - chr4_1:63334890-63334909 None:intergenic 45.0%
GAAGACACCGATGAATTCAC+AGG - chr4_1:63335037-63335056 None:intergenic 45.0%
! GCTTTTGGACTGACTAGGAA+AGG - chr4_1:63335068-63335087 None:intergenic 45.0%
! ATGAGGCTTTTGGACTGACT+AGG - chr4_1:63335073-63335092 None:intergenic 45.0%
TAAGTCCTCTTCCAAAGGTG+TGG - chr4_1:63335227-63335246 None:intergenic 45.0%
!! GCTGGAAAAGCATCAAGGTG+TGG - chr4_1:63329472-63329491 None:intergenic 50.0%
! CACCTTGATGCTTTTCCAGC+TGG + chr4_1:63329472-63329491 Msa0563020:CDS 50.0%
!! GACCAGCTGGAAAAGCATCA+AGG - chr4_1:63329477-63329496 None:intergenic 50.0%
!!! CCTCTCCCAGCTCTTTTTTC+CGG + chr4_1:63330298-63330317 Msa0563020:intron 50.0%
CTGGTCCGGAAAAAAGAGCT+GGG - chr4_1:63330306-63330325 None:intergenic 50.0%
ACTGGTCCGGAAAAAAGAGC+TGG - chr4_1:63330307-63330326 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_1:63331302-63331321 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_1:63331299-63331318 Msa0563020:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_1:63331305-63331324 Msa0563020:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr4_1:63331624-63331643 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr4_1:63331644-63331663 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr4_1:63331705-63331724 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr4_1:63331925-63331944 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr4_1:63331976-63331995 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr4_1:63331973-63331992 Msa0563020:intron 50.0%
GCGGAAACCATACGCTTCTA+AGG + chr4_1:63331992-63332011 Msa0563020:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - chr4_1:63332002-63332021 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG - chr4_1:63332041-63332060 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr4_1:63332054-63332073 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr4_1:63332055-63332074 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr4_1:63332156-63332175 Msa0563020:intron 50.0%
AAGCGCCCTCATACATATCC+TGG + chr4_1:63332240-63332259 Msa0563020:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr4_1:63332291-63332310 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr4_1:63332292-63332311 None:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr4_1:63332293-63332312 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr4_1:63332402-63332421 None:intergenic 50.0%
GTGCTTCTTCTCCACTCGTT+TGG + chr4_1:63332605-63332624 Msa0563020:intron 50.0%
GTCTTGGCGATAGAGGAGTT+GGG - chr4_1:63332676-63332695 None:intergenic 50.0%
AGTCTTGGCGATAGAGGAGT+TGG - chr4_1:63332677-63332696 None:intergenic 50.0%
TAGACATCAGAGAGGAGGAC+CGG - chr4_1:63332811-63332830 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG - chr4_1:63332816-63332835 None:intergenic 50.0%
GGGGTAAAGAATCTTGGTGG+TGG - chr4_1:63333204-63333223 None:intergenic 50.0%
GAGACGTTGGGAGAATCTAG+AGG - chr4_1:63333238-63333257 None:intergenic 50.0%
GAAGGTGGCAAAAGAGACGT+TGG - chr4_1:63333251-63333270 None:intergenic 50.0%
AAAGAGAAGAGACCGTAGCG+GGG - chr4_1:63333407-63333426 None:intergenic 50.0%
CAAAGAGAAGAGACCGTAGC+GGG - chr4_1:63333408-63333427 None:intergenic 50.0%
GCAAAGAGAAGAGACCGTAG+CGG - chr4_1:63333409-63333428 None:intergenic 50.0%
AGGGTTTCGAGAGGTTTCGA+GGG - chr4_1:63333709-63333728 None:intergenic 50.0%
GGGGATTTGAATGGGCATGT+AGG - chr4_1:63333733-63333752 None:intergenic 50.0%
GTTCCCACATCTTCGTGAAC+GGG - chr4_1:63334202-63334221 None:intergenic 50.0%
GGTTCCCACATCTTCGTGAA+CGG - chr4_1:63334203-63334222 None:intergenic 50.0%
TGAGTCAGCTTCCACACCTT+TGG + chr4_1:63335213-63335232 Msa0563020:CDS 50.0%
! AGCTTCCACACCTTTGGAAG+AGG + chr4_1:63335219-63335238 Msa0563020:CDS 50.0%
ACGAGAACTCGTAGACCAGC+TGG - chr4_1:63329490-63329509 None:intergenic 55.0%
CCGGAAAAAAGAGCTGGGAG+AGG - chr4_1:63330301-63330320 None:intergenic 55.0%
!! CTCGTAGGTACTGACTGGTC+CGG - chr4_1:63330320-63330339 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_1:63331307-63331326 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr4_1:63331313-63331332 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr4_1:63331314-63331333 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr4_1:63331313-63331332 Msa0563020:intron 55.0%
CTTCTTACCACGGCGTCTAC+TGG + chr4_1:63331480-63331499 Msa0563020:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr4_1:63331632-63331651 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr4_1:63331688-63331707 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr4_1:63331718-63331737 None:intergenic 55.0%
ATGGGAGGCTAGAGACTTGG+AGG - chr4_1:63332022-63332041 None:intergenic 55.0%
CGAGGGAGGAGTTAAATGGG+AGG - chr4_1:63332037-63332056 None:intergenic 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr4_1:63332216-63332235 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr4_1:63332217-63332236 None:intergenic 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr4_1:63332218-63332237 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr4_1:63332222-63332241 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr4_1:63332282-63332301 Msa0563020:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr4_1:63332283-63332302 Msa0563020:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr4_1:63332387-63332406 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr4_1:63332391-63332410 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr4_1:63332432-63332451 None:intergenic 55.0%
TTGGCGATAGAGGAGTTGGG+TGG - chr4_1:63332673-63332692 None:intergenic 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - chr4_1:63332726-63332745 None:intergenic 55.0%
GGAGGTTTCAGGCAACCACA+TGG - chr4_1:63333316-63333335 None:intergenic 55.0%
TGGGTAGTTAAGCCCTCACC+AGG + chr4_1:63333469-63333488 Msa0563020:intron 55.0%
TGGTCTCGGGGAGGTAAATG+CGG - chr4_1:63333671-63333690 None:intergenic 55.0%
! AGGTTTCGAGGGTGTGCATG+GGG - chr4_1:63333698-63333717 None:intergenic 55.0%
! GAGGTTTCGAGGGTGTGCAT+GGG - chr4_1:63333699-63333718 None:intergenic 55.0%
! AGAGGTTTCGAGGGTGTGCA+TGG - chr4_1:63333700-63333719 None:intergenic 55.0%
GAGGGTTTCGAGAGGTTTCG+AGG - chr4_1:63333710-63333729 None:intergenic 55.0%
CATGTAGGGAGGGTTTCGAG+AGG - chr4_1:63333718-63333737 None:intergenic 55.0%
AGCGCTTATGCACCTCAGGT+AGG - chr4_1:63333844-63333863 None:intergenic 55.0%
ACATCTTCGTGAACGGGTGC+GGG - chr4_1:63334196-63334215 None:intergenic 55.0%
CACATCTTCGTGAACGGGTG+CGG - chr4_1:63334197-63334216 None:intergenic 55.0%
GCACCCGTTCACGAAGATGT+GGG + chr4_1:63334196-63334215 Msa0563020:intron 55.0%
GCCATACAACGCGTTGCTTC+CGG + chr4_1:63334290-63334309 Msa0563020:intron 55.0%
CCATACAACGCGTTGCTTCC+GGG + chr4_1:63334291-63334310 Msa0563020:intron 55.0%
GTGAATGCTAGGTCGTTGCC+CGG - chr4_1:63334312-63334331 None:intergenic 55.0%
GAGAAGACCAGTAGACGCCG+TGG - chr4_1:63331490-63331509 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr4_1:63332051-63332070 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr4_1:63332209-63332228 None:intergenic 60.0%
! AGGGCGCTTCGACTAGTGTG+AGG - chr4_1:63332229-63332248 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr4_1:63332286-63332305 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr4_1:63332425-63332444 Msa0563020:intron 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - chr4_1:63332774-63332793 None:intergenic 60.0%
CTCGGGGAGGTAAATGCGGA+GGG - chr4_1:63333667-63333686 None:intergenic 60.0%
TCTCGGGGAGGTAAATGCGG+AGG - chr4_1:63333668-63333687 None:intergenic 60.0%
! TGCATGGGGGGTATGGTCTC+GGG - chr4_1:63333684-63333703 None:intergenic 60.0%
! GTGCATGGGGGGTATGGTCT+CGG - chr4_1:63333685-63333704 None:intergenic 60.0%
! GTTTCGAGGGTGTGCATGGG+GGG - chr4_1:63333696-63333715 None:intergenic 60.0%
! GGTTTCGAGGGTGTGCATGG+GGG - chr4_1:63333697-63333716 None:intergenic 60.0%
CGCACCCGTTCACGAAGATG+TGG + chr4_1:63334195-63334214 Msa0563020:intron 60.0%
CCCGGAAGCAACGCGTTGTA+TGG - chr4_1:63334294-63334313 None:intergenic 60.0%
GGGCTCCGCGAATCAAGTGG+TGG - chr4_1:63333387-63333406 None:intergenic 65.0%
TGATTCGCGGAGCCCCGCTA+CGG + chr4_1:63333392-63333411 Msa0563020:intron 65.0%
! GCATGGGGGGTATGGTCTCG+GGG - chr4_1:63333683-63333702 None:intergenic 65.0%
! GAGGGTGTGCATGGGGGGTA+TGG - chr4_1:63333691-63333710 None:intergenic 65.0%
ACATCCAGGCGGCGATGCAG+CGG + chr4_1:63334240-63334259 Msa0563020:intron 65.0%
GCGGGGCTCCGCGAATCAAG+TGG - chr4_1:63333390-63333409 None:intergenic 70.0%
! TGGGGGGTATGGTCTCGGGG+AGG - chr4_1:63333680-63333699 None:intergenic 70.0%
CCAAGGCCGGTCCCAAGCCC+GGG - chr4_1:63334420-63334439 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - chr4_1:63334421-63334440 None:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG + chr4_1:63334421-63334440 Msa0563020:intron 75.0%
! AGGGCCGCTGCATCGCCGCC+TGG - chr4_1:63334247-63334266 None:intergenic 80.0%
! CCCGGGCTTGGGACCGGCCT+TGG + chr4_1:63334417-63334436 Msa0563020:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 63329412 63335384 63329412 ID=Msa0563020;Name=Msa0563020
chr4_1 mRNA 63329412 63335384 63329412 ID=Msa0563020-mRNA-1;Parent=Msa0563020;Name=Msa0563020-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|0.5|0.71|7|0|536
chr4_1 exon 63329412 63329574 63329412 ID=Msa0563020-mRNA-1:exon:20081;Parent=Msa0563020-mRNA-1
chr4_1 exon 63330096 63330248 63330096 ID=Msa0563020-mRNA-1:exon:20082;Parent=Msa0563020-mRNA-1
chr4_1 exon 63330464 63330667 63330464 ID=Msa0563020-mRNA-1:exon:20083;Parent=Msa0563020-mRNA-1
chr4_1 exon 63330686 63330778 63330686 ID=Msa0563020-mRNA-1:exon:20084;Parent=Msa0563020-mRNA-1
chr4_1 exon 63330783 63330842 63330783 ID=Msa0563020-mRNA-1:exon:20085;Parent=Msa0563020-mRNA-1
chr4_1 exon 63331022 63331098 63331022 ID=Msa0563020-mRNA-1:exon:20086;Parent=Msa0563020-mRNA-1
chr4_1 exon 63334524 63335384 63334524 ID=Msa0563020-mRNA-1:exon:20087;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63329412 63329574 63329412 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63330096 63330248 63330096 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63330464 63330667 63330464 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63330686 63330778 63330686 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63330783 63330842 63330783 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63331022 63331098 63331022 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
chr4_1 CDS 63334524 63335384 63334524 ID=Msa0563020-mRNA-1:cds;Parent=Msa0563020-mRNA-1
Gene Sequence

>Msa0563020

ATGGTACACAACAGGTCTCTTGTCTATGACAACATGGATAATTCTTGCTTTCCTTCTCCACACCTTGATGCTTTTCCAGCTGGTCTACGAGTTCTCGTTGTTGATGATGATCTAACTTGGCTCAGAATCCTTGAAAAAATGCTAAAAAAATGCTTTTACCGAGTGACCACATGTTGCTTAGCAATAGAGGCTCTTAAGAAGCTCCGCGAAAGTAAAGATGCATATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAGCTTCTTGAACATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATTTGCTTAAGCCTATAAGGATGAAAGAATTGCGAAACATATGGCAACATGTCTTAAGAAAAAGAATACATGAGGCAAGAGAATTTGAAAGTCTCGAGGGAATTCACTTAATGAGAAATGGATCAGATCACACTGATGATGGAAAAGAAATGAACTTAATGAAGAAAAGGAAAAATTTCGATAGTAAACATGATGACCAAGAACTTGTAGATCGAACTTTCATAAAGAAAGCGATTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCCGTGAATCAACTTGGATTCGATAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCGTGGCTGACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACCGGCTATACTTGAGTAGGTTGCAAAAGAAAAATGATCAGAAATTGTCCTCAGGTAGAATAAAGCATTCAGATTTACCTTCAAAAGATCCAGGATGTTTAAGCTTTCTCAACTCTTTCAACAAGCAACAAAACGAAGGTGCAATCGATAGTTTTGGATATTCAGATGGGACATTAAAAATTCAAATGGATACTACAGGTCATGAAAAAAGAAGAGCTTCAACTAGTGAAATTTCTGATCCAAAGATAAGAAAGAGTTCAGAGGTAGGTCTTAACCAATCTCTGGAATCAGAAGTAAACCATACAGCATTTGACTCCACCATACCAACACAGTACTCTTGGAATGAAGTTTCTAAAACGCCACTCGAAGAAGAACAGAACACACTTGTACAATTAAAGGATAGCTTCAGCCATTTGCCATTAAATGTTACACAGCAACACTTCCAAATTGACCAATCACTTTCATTTAATTCCAATCCCTCCGATTACAAGAATGATTACATTAGTCCTGTGAATTCATCGGTGTCTTCAGTTGATACCTTTCCTAGTCAGTCCAAAAGCCTCATCTCAAATGATCAATCTCCTGATATCATTTTAACTTCAAATTTGAGTTCAAAAACACCAAGATTTAATCTTGGTTGCATTTATGATATGGAAATCTACCAAAGAAACTTACTTTTGGGTATTGAGTCAGCTTCCACACCTTTGGAAGAGGACTTAAACTTCCTTTTGTTACAAGGTGAATATGATATGAATATGAACTTTGACATGCAGAATATAGAGATGTCAGAGTATTATGATCCAAGGTTTATTGCTGAAGTTCCTACCAATTTGTATGCTTCAGCAGATTATTCTTAG
Protein sequence

>Msa0563020

MVHNRSLVYDNMDNSCFPSPHLDAFPAGLRVLVVDDDLTWLRILEKMLKKCFYRVTTCCLAIEALKKLRESKDAYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEAREFESLEGIHLMRNGSDHTDDGKEMNLMKKRKNFDSKHDDQELVDRTFIKKAIWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKKNDQKLSSGRIKHSDLPSKDPGCLSFLNSFNKQQNEGAIDSFGYSDGTLKIQMDTTGHEKRRASTSEISDPKIRKSSEVGLNQSLESEVNHTAFDSTIPTQYSWNEVSKTPLEEEQNTLVQLKDSFSHLPLNVTQQHFQIDQSLSFNSNPSDYKNDYISPVNSSVSSVDTFPSQSKSLISNDQSPDIILTSNLSSKTPRFNLGCIYDMEIYQRNLLLGIESASTPLEEDLNFLLLQGEYDMNMNFDMQNIEMSEYYDPRFIAEVPTNLYASADYS*