Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563170 | XP_039685507.1 | 94.595 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563170 | sp|Q8VYP6|NOL9_ARATH | 54.348 | 368 | 152 | 8 | 10 | 370 | 10 | 368 | 4.53e-132 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563170 | A0A396GMT2 | 94.595 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0212750 | Msa0563170 | 0.844031 | 9.721102e-59 | -8.615850e-47 |
| Msa0295000 | Msa0563170 | 0.809778 | 1.599303e-50 | -8.615850e-47 |
| Msa0563170 | Msa0609970 | -0.803299 | 3.724458e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563170 | MtrunA17_Chr8g0377011 | 94.595 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 0.0 | 714 |
| Msa0563170 | MtrunA17_Chr8g0377031 | 61.272 | 173 | 55 | 4 | 1 | 169 | 1 | 165 | 1.38e-65 | 206 |
| Msa0563170 | MtrunA17_Chr8g0377021 | 82.353 | 34 | 6 | 0 | 322 | 355 | 1 | 34 | 1.53e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563170 | AT5G11010.4 | 54.348 | 368 | 152 | 8 | 10 | 370 | 10 | 368 | 4.60e-133 | 385 |
| Msa0563170 | AT5G11010.2 | 54.348 | 368 | 152 | 8 | 10 | 370 | 10 | 368 | 4.60e-133 | 385 |
| Msa0563170 | AT5G11010.3 | 54.348 | 368 | 152 | 8 | 10 | 370 | 10 | 368 | 4.60e-133 | 385 |
| Msa0563170 | AT5G11010.1 | 52.104 | 309 | 132 | 8 | 10 | 311 | 10 | 309 | 6.00e-105 | 311 |
Find 113 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAAACAAGTAGGAATT+TGG | 0.234721 | 4_1:+63467810 | None:intergenic |
| CACCGTGTCTAATTTAAATT+AGG | 0.238683 | 4_1:+63465634 | None:intergenic |
| AATACTTCTGGCTGGGTTAA+AGG | 0.244134 | 4_1:-63470870 | Msa0563170:intron |
| GTTGCGGGTTTGTTACAAAT+TGG | 0.257826 | 4_1:-63465740 | Msa0563170:three_prime_UTR |
| ATTTACCTGCTGGAAAATTC+TGG | 0.277149 | 4_1:-63470605 | Msa0563170:CDS |
| GGTTGATTTGCCAACACTTC+CGG | 0.297232 | 4_1:+63471936 | None:intergenic |
| TCTTGCATCTGGTTGCTAAT+AGG | 0.301989 | 4_1:+63471890 | None:intergenic |
| AATTCCTACTTGTTTATTGC+AGG | 0.309415 | 4_1:-63467807 | Msa0563170:intron |
| CGAGATAGATTCAGTTCTTA+AGG | 0.329341 | 4_1:-63470547 | Msa0563170:CDS |
| CAAACTGAGTTTACTCCTCT+TGG | 0.341189 | 4_1:-63471838 | Msa0563170:CDS |
| GCTGGAAAATTCTGGTTAGA+TGG | 0.341592 | 4_1:-63470597 | Msa0563170:CDS |
| ATAAGCTACTTTCTTGCATC+TGG | 0.349894 | 4_1:+63471879 | None:intergenic |
| GCAGCTTGTGACCATTCATC+TGG | 0.352128 | 4_1:+63472009 | None:intergenic |
| CCCCAGGGAGTTTGTTCAAA+AGG | 0.361346 | 4_1:-63470419 | Msa0563170:intron |
| GTTGATTTGCCAACACTTCC+GGG | 0.363633 | 4_1:+63471937 | None:intergenic |
| AGTACTTGAAACCATCAAAA+AGG | 0.368009 | 4_1:-63471662 | Msa0563170:intron |
| TGGTTGCTAATAGGAGATTA+AGG | 0.374760 | 4_1:+63471899 | None:intergenic |
| AACACTGATGGATCTATCTT+AGG | 0.381453 | 4_1:+63470993 | None:intergenic |
| CCCACACATGTTGTTAAGAT+AGG | 0.383733 | 4_1:-63470657 | Msa0563170:CDS |
| ATTTGCCTCTGTATTGTTGC+GGG | 0.383905 | 4_1:-63465755 | Msa0563170:three_prime_UTR |
| CCTCTTATAGTGAATACTTC+TGG | 0.384908 | 4_1:-63470882 | Msa0563170:CDS |
| TCATCTGGGATGAAAATATC+TGG | 0.385934 | 4_1:+63472024 | None:intergenic |
| TACAACGGGAGGCGTTGAAC+TGG | 0.388273 | 4_1:+63471972 | None:intergenic |
| TTGCGGGTTTGTTACAAATT+GGG | 0.391680 | 4_1:-63465739 | Msa0563170:three_prime_UTR |
| AGCCAACAATACTAGCATTC+AGG | 0.392276 | 4_1:+63469821 | None:intergenic |
| TTACCCTGGTGCCTTGGTCT+TGG | 0.393880 | 4_1:-63469769 | Msa0563170:intron |
| GTTGTATTTGAACCATTTGC+AGG | 0.396603 | 4_1:+63465681 | None:intergenic |
| CCTCCCGTTGTACTCGTTTG+TGG | 0.399576 | 4_1:-63471961 | Msa0563170:CDS |
| CCAGAAGTATTCACTATAAG+AGG | 0.406197 | 4_1:+63470882 | None:intergenic |
| GGCCTGAATGCTAGTATTGT+TGG | 0.412902 | 4_1:-63469823 | Msa0563170:CDS |
| TTATAGTGAATACTTCTGGC+TGG | 0.413967 | 4_1:-63470878 | Msa0563170:CDS |
| GTGGACATGCTAAAATATAT+TGG | 0.414066 | 4_1:-63470681 | Msa0563170:CDS |
| CAAGAGGAGTAAACTCAGTT+TGG | 0.425282 | 4_1:+63471839 | None:intergenic |
| AAAAGTCAACCTCTTGCTAC+AGG | 0.438339 | 4_1:-63467840 | Msa0563170:CDS |
| CCTGCGTGGCGAACGGATAG+TGG | 0.442876 | 4_1:-63470386 | Msa0563170:CDS |
| CCGTAGAATATTTCAGAGCT+TGG | 0.444402 | 4_1:+63469844 | None:intergenic |
| TATATTCTACTTCCTGCAAA+TGG | 0.444424 | 4_1:-63465693 | Msa0563170:three_prime_UTR |
| GGAGATTTACCCTGGTGCCT+TGG | 0.462451 | 4_1:-63469775 | Msa0563170:CDS |
| CGAATCTTTATGCTTGCAAT+GGG | 0.463513 | 4_1:+63470271 | None:intergenic |
| TGTTGGTTATGAAGTATTAG+TGG | 0.466461 | 4_1:-63470700 | Msa0563170:CDS |
| CGTAGAATATTTCAGAGCTT+GGG | 0.466484 | 4_1:+63469845 | None:intergenic |
| GTTGTACTCGTTTGTGGACC+CGG | 0.473409 | 4_1:-63471955 | Msa0563170:CDS |
| CTGGAAAATTCTGGTTAGAT+GGG | 0.476615 | 4_1:-63470596 | Msa0563170:CDS |
| CTTGCAATGGGAACTTGATA+AGG | 0.478521 | 4_1:+63470283 | None:intergenic |
| GGTCCACAAACGAGTACAAC+GGG | 0.482959 | 4_1:+63471958 | None:intergenic |
| AAATTTAAGAATTTACCTGC+TGG | 0.484367 | 4_1:-63470615 | Msa0563170:CDS |
| TTCAGAGAAACAAATGGCAC+AGG | 0.495894 | 4_1:+63467863 | None:intergenic |
| TGTAAGGTGATAAGCGTCCT+TGG | 0.498324 | 4_1:+63465896 | None:intergenic |
| ACGGCGCGCGGCAGCGATGA+GGG | 0.498934 | 4_1:+63472233 | None:intergenic |
| CTTACCTGCAATAAACAAGT+AGG | 0.503057 | 4_1:+63467803 | None:intergenic |
| AATACATTCTCTGATATGTA+AGG | 0.508201 | 4_1:+63465880 | None:intergenic |
| ACAGACAGAGAGACAGCAAT+GGG | 0.510444 | 4_1:-63472060 | Msa0563170:intron |
| CAGCTTGTGACCATTCATCT+GGG | 0.510594 | 4_1:+63472010 | None:intergenic |
| CAGCGGAGCAACGGCGGTGA+GGG | 0.511141 | 4_1:+63472266 | None:intergenic |
| CTCGTCTCCTGCGTGGCGAA+CGG | 0.511504 | 4_1:-63470393 | Msa0563170:CDS |
| ATGAGGGAAGCTGTAGGCAG+CGG | 0.514006 | 4_1:+63472249 | None:intergenic |
| TAGATTCAGTTCTTAAGGAC+CGG | 0.517139 | 4_1:-63470542 | Msa0563170:intron |
| TCGAATCTTTATGCTTGCAA+TGG | 0.517870 | 4_1:+63470270 | None:intergenic |
| AGCTGTAGGCAGCGGAGCAA+CGG | 0.519519 | 4_1:+63472257 | None:intergenic |
| TGGTTAGATGGGGAAGATGA+TGG | 0.521887 | 4_1:-63470585 | Msa0563170:CDS |
| CTTAAATTTATAAAATTCAG+TGG | 0.522288 | 4_1:+63470629 | None:intergenic |
| TATAGTGAATACTTCTGGCT+GGG | 0.525760 | 4_1:-63470877 | Msa0563170:CDS |
| CCTACCAAGACCAAGGCACC+AGG | 0.529524 | 4_1:+63469765 | None:intergenic |
| GTTGTTTACGAAGTTACTCC+AGG | 0.545994 | 4_1:-63471799 | Msa0563170:intron |
| CCAAGCTCTGAAATATTCTA+CGG | 0.547357 | 4_1:-63469844 | Msa0563170:CDS |
| GCCTATCTTAACAACATGTG+TGG | 0.557846 | 4_1:+63470656 | None:intergenic |
| AGGCACCAGGGTAAATCTCC+AGG | 0.558138 | 4_1:+63469778 | None:intergenic |
| AATTTGCCTCTGTATTGTTG+CGG | 0.558483 | 4_1:-63465756 | Msa0563170:three_prime_UTR |
| GCAGTTGAATCTGAAGTACC+TGG | 0.560619 | 4_1:-63469796 | Msa0563170:CDS |
| TTCAGATATGTCATCGGACA+AGG | 0.564343 | 4_1:-63470335 | Msa0563170:CDS |
| GGGATGAAAATATCTGGTGA+AGG | 0.564972 | 4_1:+63472030 | None:intergenic |
| TAGGAGATTAAGGAGATAGC+GGG | 0.565444 | 4_1:+63471909 | None:intergenic |
| ACACTAATGACGGCGAGGCT+AGG | 0.569762 | 4_1:+63472289 | None:intergenic |
| GACGGCGCGCGGCAGCGATG+AGG | 0.572173 | 4_1:+63472232 | None:intergenic |
| GCAGCGGAGCAACGGCGGTG+AGG | 0.578323 | 4_1:+63472265 | None:intergenic |
| GTTTGTGGACCCGGAAGTGT+TGG | 0.578347 | 4_1:-63471946 | Msa0563170:CDS |
| GTCTCATCACCGTTCATCTG+AGG | 0.578983 | 4_1:-63472212 | Msa0563170:intron |
| ACATACTCTAAGAACACTGA+TGG | 0.583221 | 4_1:+63470981 | None:intergenic |
| GGATGAAAATATCTGGTGAA+GGG | 0.583452 | 4_1:+63472031 | None:intergenic |
| ATAAGGACAGTGAGATGTCA+AGG | 0.584321 | 4_1:+63470300 | None:intergenic |
| TTCATGGAAGCAGTAGCACA+TGG | 0.584672 | 4_1:-63465834 | Msa0563170:three_prime_UTR |
| CCACTATCCGTTCGCCACGC+AGG | 0.585492 | 4_1:+63470386 | None:intergenic |
| AACGGTGATGAGACGGCGCG+CGG | 0.592233 | 4_1:+63472221 | None:intergenic |
| TGTAGGCAGCGGAGCAACGG+CGG | 0.592781 | 4_1:+63472260 | None:intergenic |
| AGAGGCATTGACACAGTCAA+AGG | 0.594937 | 4_1:-63467905 | Msa0563170:CDS |
| CAGGGAGTTTGTTCAAAAGG+AGG | 0.595105 | 4_1:-63470416 | Msa0563170:CDS |
| GGATATCACCCTGTAGCAAG+AGG | 0.602061 | 4_1:+63467831 | None:intergenic |
| ATTAAGGAGATAGCGGGCGA+AGG | 0.607891 | 4_1:+63471915 | None:intergenic |
| TCAGATGAACGGTGATGAGA+CGG | 0.609180 | 4_1:+63472214 | None:intergenic |
| GATTCGACATGTTCATCGTG+AGG | 0.617943 | 4_1:-63470254 | Msa0563170:intron |
| AGGCGTTGAACTGGATACAA+TGG | 0.618822 | 4_1:+63471981 | None:intergenic |
| CCTATCTTAACAACATGTGT+GGG | 0.620818 | 4_1:+63470657 | None:intergenic |
| GCTTATCTTGATACCGACGT+TGG | 0.626457 | 4_1:-63471862 | Msa0563170:CDS |
| AAGTACCTGGAGATTTACCC+TGG | 0.626705 | 4_1:-63469783 | Msa0563170:CDS |
| GCAGCGATGAGGGAAGCTGT+AGG | 0.641779 | 4_1:+63472243 | None:intergenic |
| AAAGTCAACCTCTTGCTACA+GGG | 0.642893 | 4_1:-63467839 | Msa0563170:CDS |
| GTTAGAGAGATTAAACCAAG+AGG | 0.643471 | 4_1:+63471823 | None:intergenic |
| GAGTGATTCAGATATGTCAT+CGG | 0.647281 | 4_1:-63470341 | Msa0563170:CDS |
| TGGAAAATTCTGGTTAGATG+GGG | 0.652558 | 4_1:-63470595 | Msa0563170:CDS |
| GACAGACAGAGAGACAGCAA+TGG | 0.654238 | 4_1:-63472061 | Msa0563170:intron |
| AGGAGTATACCTCAGATGAA+CGG | 0.659634 | 4_1:+63472203 | None:intergenic |
| ATAGGAGATTAAGGAGATAG+CGG | 0.661098 | 4_1:+63471908 | None:intergenic |
| TGTGACACAGGAATTGTGAG+AGG | 0.674742 | 4_1:-63467923 | Msa0563170:intron |
| AAGGAGGCTCGTCTCCTGCG+TGG | 0.674748 | 4_1:-63470400 | Msa0563170:CDS |
| CAAGTTACCTACCAAGACCA+AGG | 0.684244 | 4_1:+63469758 | None:intergenic |
| GCGGTGAGGGACACTAATGA+CGG | 0.685487 | 4_1:+63472279 | None:intergenic |
| GATGACATATCTGAATCACT+CGG | 0.694855 | 4_1:+63470343 | None:intergenic |
| AAACTCAGTTTGGCCAACGT+CGG | 0.697748 | 4_1:+63471849 | None:intergenic |
| GGGTCCACAAACGAGTACAA+CGG | 0.700015 | 4_1:+63471957 | None:intergenic |
| GAGGGACACTAATGACGGCG+AGG | 0.712205 | 4_1:+63472284 | None:intergenic |
| CTACCAAGACCAAGGCACCA+GGG | 0.712305 | 4_1:+63469766 | None:intergenic |
| CCACAAACGAGTACAACGGG+AGG | 0.713003 | 4_1:+63471961 | None:intergenic |
| ACAAACCCGCAACAATACAG+AGG | 0.718925 | 4_1:+63465750 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTTTATTTTTATATAA+AGG | - | chr4_1:63468053-63468072 | Msa0563170:intron | 10.0% |
| !!! | TATTTGAAATTTCAAAAGAA+CGG | - | chr4_1:63466561-63466580 | Msa0563170:intron | 15.0% |
| !! | CTTAAATTTATAAAATTCAG+TGG | + | chr4_1:63467337-63467356 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAAATTCAAAG+TGG | + | chr4_1:63467953-63467972 | None:intergenic | 15.0% |
| !!! | AATTCTCTAAAATTATAAAG+GGG | + | chr4_1:63470434-63470453 | None:intergenic | 15.0% |
| !!! | GAATTCTCTAAAATTATAAA+GGG | + | chr4_1:63470435-63470454 | None:intergenic | 15.0% |
| !!! | TGAATTCTCTAAAATTATAA+AGG | + | chr4_1:63470436-63470455 | None:intergenic | 15.0% |
| !!! | TGGTTTTTTTTTTTAATTGA+AGG | - | chr4_1:63471062-63471081 | Msa0563170:intron | 15.0% |
| !!! | CAATATTTTATTTGATTAAG+AGG | - | chr4_1:63471248-63471267 | Msa0563170:intron | 15.0% |
| !!! | ACTTTTTATATGACAATTTA+TGG | - | chr4_1:63471297-63471316 | Msa0563170:intron | 15.0% |
| !!! | CTTTTTATATGACAATTTAT+GGG | - | chr4_1:63471298-63471317 | Msa0563170:intron | 15.0% |
| !! | TAAAACTATAGTAATAGTAA+TGG | + | chr4_1:63471443-63471462 | None:intergenic | 15.0% |
| !! | ACGAAAATAAAAATAGTATT+AGG | + | chr4_1:63472172-63472191 | None:intergenic | 15.0% |
| !! | GTAAAAATGAAGATTAAGAT+AGG | + | chr4_1:63466208-63466227 | None:intergenic | 20.0% |
| !!! | TGAATTTGAAATATTTGACA+AGG | - | chr4_1:63466370-63466389 | Msa0563170:intron | 20.0% |
| !!! | TCTTAATGATTGGTTATTTA+TGG | + | chr4_1:63466661-63466680 | None:intergenic | 20.0% |
| !! | TATATGACATTCTTAATGAT+TGG | + | chr4_1:63466671-63466690 | None:intergenic | 20.0% |
| !! | TAATAACAATGAAATAGACT+AGG | + | chr4_1:63466769-63466788 | None:intergenic | 20.0% |
| !!! | CTTTTGATAATGATCATAAA+TGG | + | chr4_1:63467013-63467032 | None:intergenic | 20.0% |
| !! | TACAAAATGTATGATTCAAA+AGG | + | chr4_1:63467152-63467171 | None:intergenic | 20.0% |
| !! | AATAAAACCAAGCATATAAA+GGG | + | chr4_1:63467921-63467940 | None:intergenic | 20.0% |
| !! | TCTATATATACACAAGAATA+AGG | - | chr4_1:63468334-63468353 | Msa0563170:intron | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | - | chr4_1:63469419-63469438 | Msa0563170:intron | 20.0% |
| !!! | ATCTATTTCTTGATTTCAAT+AGG | - | chr4_1:63470509-63470528 | Msa0563170:intron | 20.0% |
| !! | TATCTTATTATTAGTGTGTT+TGG | - | chr4_1:63470535-63470554 | Msa0563170:intron | 20.0% |
| !! | ATCTTATTATTAGTGTGTTT+GGG | - | chr4_1:63470536-63470555 | Msa0563170:intron | 20.0% |
| !! | ATAGTATATATATGAGTATC+AGG | - | chr4_1:63470593-63470612 | Msa0563170:CDS | 20.0% |
| !! | AATCAAGAGTTATAATCTTT+GGG | + | chr4_1:63470695-63470714 | None:intergenic | 20.0% |
| !! | TTATTACTTGTAATAAGGAA+GGG | - | chr4_1:63471148-63471167 | Msa0563170:intron | 20.0% |
| !!! | TATTTTATTTGATTAAGAGG+AGG | - | chr4_1:63471251-63471270 | Msa0563170:intron | 20.0% |
| !!! | ATTTTATTTGATTAAGAGGA+GGG | - | chr4_1:63471252-63471271 | Msa0563170:intron | 20.0% |
| !!! | TTTCATTTTTTAATCCAAGT+AGG | - | chr4_1:63471946-63471965 | Msa0563170:CDS | 20.0% |
| !!! | TTCATTTTTTAATCCAAGTA+GGG | - | chr4_1:63471947-63471966 | Msa0563170:CDS | 20.0% |
| !!! | AAAAGGTTTCTAGTTTAGTT+AGG | + | chr4_1:63465879-63465898 | None:intergenic | 25.0% |
| ! | ATGAAGATTAAGATAGGTAA+TGG | + | chr4_1:63466202-63466221 | None:intergenic | 25.0% |
| ! | TTAAGATAGTTGGTTACTAT+TGG | - | chr4_1:63466486-63466505 | Msa0563170:intron | 25.0% |
| ! | TAAGATAGTTGGTTACTATT+GGG | - | chr4_1:63466487-63466506 | Msa0563170:intron | 25.0% |
| ! | TTATTTATGGTATGTTTGGA+TGG | + | chr4_1:63466648-63466667 | None:intergenic | 25.0% |
| ! | TTGGTTATTTATGGTATGTT+TGG | + | chr4_1:63466652-63466671 | None:intergenic | 25.0% |
| ! | TATTATGTTACTCATTCAGT+TGG | - | chr4_1:63467221-63467240 | Msa0563170:intron | 25.0% |
| ! | AAATTTAAGAATTTACCTGC+TGG | - | chr4_1:63467348-63467367 | Msa0563170:intron | 25.0% |
| ! | CAATAAAACCAAGCATATAA+AGG | + | chr4_1:63467922-63467941 | None:intergenic | 25.0% |
| !!! | TGACCTATGAATATTTTTGT+AGG | - | chr4_1:63468094-63468113 | Msa0563170:intron | 25.0% |
| ! | TTCTCAACATTGAAAAGATT+AGG | - | chr4_1:63468285-63468304 | Msa0563170:intron | 25.0% |
| ! | TGTATATATAGAAAACCCAT+AGG | + | chr4_1:63468326-63468345 | None:intergenic | 25.0% |
| ! | TTCATTGAGTTAAATTCGTT+TGG | + | chr4_1:63468436-63468455 | None:intergenic | 25.0% |
| ! | TCTGCATCATTTACAAAATA+AGG | - | chr4_1:63468461-63468480 | Msa0563170:intron | 25.0% |
| !! | ACGTTTTATCAAAGAAAACT+TGG | + | chr4_1:63468682-63468701 | None:intergenic | 25.0% |
| ! | GACATTTGGATTCTAATAAA+AGG | - | chr4_1:63469218-63469237 | Msa0563170:intron | 25.0% |
| ! | TTTCATTAGAATCCAAATGT+CGG | + | chr4_1:63469398-63469417 | None:intergenic | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | - | chr4_1:63469486-63469505 | Msa0563170:intron | 25.0% |
| !! | TTAAGTTGTAACACATCTTA+AGG | - | chr4_1:63469579-63469598 | Msa0563170:intron | 25.0% |
| !!! | ACTTTTTTCAGAGAAACAAA+TGG | + | chr4_1:63470109-63470128 | None:intergenic | 25.0% |
| !!! | TTGGTAACACTTTTTTAACA+AGG | + | chr4_1:63470248-63470267 | None:intergenic | 25.0% |
| !! | ATAATTTGTCATAAAATGCG+TGG | - | chr4_1:63470298-63470317 | Msa0563170:CDS | 25.0% |
| ! | TCTTATTATTAGTGTGTTTG+GGG | - | chr4_1:63470537-63470556 | Msa0563170:intron | 25.0% |
| ! | CAATCAAGAGTTATAATCTT+TGG | + | chr4_1:63470696-63470715 | None:intergenic | 25.0% |
| ! | CAAAGATTATAACTCTTGAT+TGG | - | chr4_1:63470694-63470713 | Msa0563170:CDS | 25.0% |
| !!! | ATATTTTTAGCTAGTAGAGA+AGG | - | chr4_1:63470935-63470954 | Msa0563170:CDS | 25.0% |
| !!! | TATTTTTAGCTAGTAGAGAA+GGG | - | chr4_1:63470936-63470955 | Msa0563170:CDS | 25.0% |
| ! | TTGGCTTATTACTTGTAATA+AGG | - | chr4_1:63471143-63471162 | Msa0563170:intron | 25.0% |
| ! | CTTATTACTTGTAATAAGGA+AGG | - | chr4_1:63471147-63471166 | Msa0563170:intron | 25.0% |
| ! | TATTACTTGTAATAAGGAAG+GGG | - | chr4_1:63471149-63471168 | Msa0563170:intron | 25.0% |
| ! | TATTTGATGCAAAAGAATAG+AGG | - | chr4_1:63471184-63471203 | Msa0563170:intron | 25.0% |
| ! | ATTTGATGCAAAAGAATAGA+GGG | - | chr4_1:63471185-63471204 | Msa0563170:intron | 25.0% |
| !!! | TTTTATTTGATTAAGAGGAG+GGG | - | chr4_1:63471253-63471272 | Msa0563170:intron | 25.0% |
| ! | GACAATTTATGGGTATATTT+AGG | - | chr4_1:63471308-63471327 | Msa0563170:intron | 25.0% |
| !! | TATAGTAATAGTAATGGAGA+GGG | + | chr4_1:63471437-63471456 | None:intergenic | 25.0% |
| !! | AAACACAATTATGCAAGTTT+TGG | + | chr4_1:63471502-63471521 | None:intergenic | 25.0% |
| ! | GTGTTTATATTCTCAAAACA+TGG | - | chr4_1:63471516-63471535 | Msa0563170:intron | 25.0% |
| ! | TGAGAAAAAATGAAAAGAGA+GGG | + | chr4_1:63471584-63471603 | None:intergenic | 25.0% |
| ! | TTGAGAAAAAATGAAAAGAG+AGG | + | chr4_1:63471585-63471604 | None:intergenic | 25.0% |
| !!! | GTTTTAGTCTTACTTCTATT+TGG | - | chr4_1:63471671-63471690 | Msa0563170:CDS | 25.0% |
| !! | TGTTAAGAAGTATAGGTTTA+GGG | + | chr4_1:63471850-63471869 | None:intergenic | 25.0% |
| !! | ATGTTAAGAAGTATAGGTTT+AGG | + | chr4_1:63471851-63471870 | None:intergenic | 25.0% |
| !! | AGATTGATGTTAAGAAGTAT+AGG | + | chr4_1:63471857-63471876 | None:intergenic | 25.0% |
| !! | ACATTGAAAGTTTGAAACAT+GGG | + | chr4_1:63471910-63471929 | None:intergenic | 25.0% |
| !! | TACATTGAAAGTTTGAAACA+TGG | + | chr4_1:63471911-63471930 | None:intergenic | 25.0% |
| !! | AAAAAACATTGCTTCTTTTC+AGG | - | chr4_1:63472043-63472062 | Msa0563170:CDS | 25.0% |
| ! | AATACATTCTCTGATATGTA+AGG | + | chr4_1:63472086-63472105 | None:intergenic | 25.0% |
| !!! | ACCTAGTTTTTTCTTTTTCA+TGG | - | chr4_1:63472113-63472132 | Msa0563170:intron | 25.0% |
| ! | TCCATGAAAAAGAAAAAACT+AGG | + | chr4_1:63472117-63472136 | None:intergenic | 25.0% |
| ACAAAGTGAAGAAAAAGAAG+AGG | + | chr4_1:63465783-63465802 | None:intergenic | 30.0% | |
| ! | ATATTTTCATCCCAGATGAA+TGG | - | chr4_1:63465943-63465962 | Msa0563170:intron | 30.0% |
| AGTACTTGAAACCATCAAAA+AGG | - | chr4_1:63466301-63466320 | Msa0563170:intron | 30.0% | |
| ! | CATAGTCTATACCTTTTTGA+TGG | + | chr4_1:63466315-63466334 | None:intergenic | 30.0% |
| GCACATAATCACTATTCATT+AGG | - | chr4_1:63466418-63466437 | Msa0563170:intron | 30.0% | |
| CATTAGGTACATGTAAAGTT+TGG | - | chr4_1:63466434-63466453 | Msa0563170:intron | 30.0% | |
| ! | GTGTTATTCAATTGCTAGTT+AGG | - | chr4_1:63466463-63466482 | Msa0563170:intron | 30.0% |
| AAGATAGTTGGTTACTATTG+GGG | - | chr4_1:63466488-63466507 | Msa0563170:intron | 30.0% | |
| ! | GTTTTCTATATACAGTGAAG+TGG | - | chr4_1:63466790-63466809 | Msa0563170:intron | 30.0% |
| AGGATATATTTGACTCTGTT+AGG | - | chr4_1:63466835-63466854 | Msa0563170:intron | 30.0% | |
| GGATATATTTGACTCTGTTA+GGG | - | chr4_1:63466836-63466855 | Msa0563170:intron | 30.0% | |
| ATGTTCGTTCAAATAAGACT+TGG | + | chr4_1:63466871-63466890 | None:intergenic | 30.0% | |
| ! | ACGAACATGTTTACTTGTTA+TGG | - | chr4_1:63466883-63466902 | Msa0563170:intron | 30.0% |
| ! | TCTGTCATTTATTCCATAAC+AGG | - | chr4_1:63466923-63466942 | Msa0563170:intron | 30.0% |
| !!! | AGCATTTTTTCGCTTATCAA+AGG | + | chr4_1:63467046-63467065 | None:intergenic | 30.0% |
| AATTGATATGTTGTTAGTCC+AGG | + | chr4_1:63467202-63467221 | None:intergenic | 30.0% | |
| ! | TGTTGGTTATGAAGTATTAG+TGG | - | chr4_1:63467263-63467282 | Msa0563170:intron | 30.0% |
| GTGGACATGCTAAAATATAT+TGG | - | chr4_1:63467282-63467301 | Msa0563170:intron | 30.0% | |
| ACCATCTTTAACTGCTAATT+TGG | - | chr4_1:63467465-63467484 | Msa0563170:intron | 30.0% | |
| ACCAAATTAGCAGTTAAAGA+TGG | + | chr4_1:63467469-63467488 | None:intergenic | 30.0% | |
| TAATAGAATATTGTTTCCCC+AGG | - | chr4_1:63467528-63467547 | Msa0563170:intron | 30.0% | |
| AATAGAATATTGTTTCCCCA+GGG | - | chr4_1:63467529-63467548 | Msa0563170:intron | 30.0% | |
| GGACCTACAAAAATATTCAT+AGG | + | chr4_1:63468100-63468119 | None:intergenic | 30.0% | |
| TAGTAAATCCCAAACATCAT+CGG | + | chr4_1:63468396-63468415 | None:intergenic | 30.0% | |
| TGGAATATTGTATACATGCT+GGG | + | chr4_1:63468573-63468592 | None:intergenic | 30.0% | |
| GTATACAATATTCCAGAACA+TGG | - | chr4_1:63468578-63468597 | Msa0563170:intron | 30.0% | |
| ATCAAAGAAAACTTGGAAAG+TGG | + | chr4_1:63468675-63468694 | None:intergenic | 30.0% | |
| TTAATTTCATGTTCTGCCTT+AGG | + | chr4_1:63468906-63468925 | None:intergenic | 30.0% | |
| GACTTGTGATTATGTCTAAA+TGG | - | chr4_1:63468939-63468958 | Msa0563170:intron | 30.0% | |
| ! | ACATCATTTTACTAATTCCG+TGG | - | chr4_1:63469111-63469130 | Msa0563170:intron | 30.0% |
| !!! | AATGTCGATTTTTGTTTACG+AGG | + | chr4_1:63469204-63469223 | None:intergenic | 30.0% |
| CGTAAACAAAAATCGACATT+TGG | - | chr4_1:63469204-63469223 | Msa0563170:intron | 30.0% | |
| ! | CCACAAATGTATATTCCTTT+TGG | + | chr4_1:63469488-63469507 | None:intergenic | 30.0% |
| CCAAAAGGAATATACATTTG+TGG | - | chr4_1:63469485-63469504 | Msa0563170:intron | 30.0% | |
| ! | TGATCTTCTAGTTATGCATT+TGG | - | chr4_1:63469718-63469737 | Msa0563170:intron | 30.0% |
| ! | GATCTTCTAGTTATGCATTT+GGG | - | chr4_1:63469719-63469738 | Msa0563170:intron | 30.0% |
| ATTTGGGAAATTCTAAGTGT+TGG | - | chr4_1:63469735-63469754 | Msa0563170:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr4_1:63469894-63469913 | Msa0563170:intron | 30.0% | |
| ! | ATGCTTAGTGTTGAAATTTG+GGG | + | chr4_1:63469965-63469984 | None:intergenic | 30.0% |
| ! | GATGCTTAGTGTTGAAATTT+GGG | + | chr4_1:63469966-63469985 | None:intergenic | 30.0% |
| ! | TGATGCTTAGTGTTGAAATT+TGG | + | chr4_1:63469967-63469986 | None:intergenic | 30.0% |
| GCAATAAACAAGTAGGAATT+TGG | + | chr4_1:63470156-63470175 | None:intergenic | 30.0% | |
| AATTCCTACTTGTTTATTGC+AGG | - | chr4_1:63470156-63470175 | Msa0563170:intron | 30.0% | |
| ACAAGTTAATGTTGAGAAGA+AGG | + | chr4_1:63470210-63470229 | None:intergenic | 30.0% | |
| GACAACATAATAAAGCTGTT+TGG | + | chr4_1:63470267-63470286 | None:intergenic | 30.0% | |
| AATGAACAGAACTGATAGAA+GGG | + | chr4_1:63470804-63470823 | None:intergenic | 30.0% | |
| CATTATGTTACGTTTGAATC+AGG | - | chr4_1:63470863-63470882 | Msa0563170:intron | 30.0% | |
| TCATCTTAAGATTCTGATGA+AGG | - | chr4_1:63471015-63471034 | Msa0563170:CDS | 30.0% | |
| TTGCTAGGTTCTTTACTATA+TGG | - | chr4_1:63471038-63471057 | Msa0563170:intron | 30.0% | |
| TGCTAGGTTCTTTACTATAT+GGG | - | chr4_1:63471039-63471058 | Msa0563170:intron | 30.0% | |
| !! | TTTTTAATTGAAGGAAGCAC+TGG | - | chr4_1:63471071-63471090 | Msa0563170:intron | 30.0% |
| ! | TGTTCTTTTTCTTATGCTCT+TGG | - | chr4_1:63471124-63471143 | Msa0563170:intron | 30.0% |
| TTTGATGCAAAAGAATAGAG+GGG | - | chr4_1:63471186-63471205 | Msa0563170:intron | 30.0% | |
| TTTATTTGATTAAGAGGAGG+GGG | - | chr4_1:63471254-63471273 | Msa0563170:intron | 30.0% | |
| ! | CTATAGTAATAGTAATGGAG+AGG | + | chr4_1:63471438-63471457 | None:intergenic | 30.0% |
| !! | ACAATTATGCAAGTTTTGGT+GGG | + | chr4_1:63471498-63471517 | None:intergenic | 30.0% |
| ATATTCTCAAAACATGGAGA+AGG | - | chr4_1:63471522-63471541 | Msa0563170:intron | 30.0% | |
| GAGAAGGTTAAAAAATGAAG+AGG | - | chr4_1:63471538-63471557 | Msa0563170:intron | 30.0% | |
| GAGAAAAAATGAAAAGAGAG+GGG | + | chr4_1:63471583-63471602 | None:intergenic | 30.0% | |
| ATCTAAATATGTCCTGCATA+GGG | + | chr4_1:63471613-63471632 | None:intergenic | 30.0% | |
| AATCTAAATATGTCCTGCAT+AGG | + | chr4_1:63471614-63471633 | None:intergenic | 30.0% | |
| ! | GTCTTACTTCTATTTGGTTT+AGG | - | chr4_1:63471677-63471696 | Msa0563170:CDS | 30.0% |
| ! | GTACTGATAATTAGTACTAC+CGG | + | chr4_1:63471715-63471734 | None:intergenic | 30.0% |
| ! | TTTTTAATCCAAGTAGGGAA+AGG | - | chr4_1:63471952-63471971 | Msa0563170:CDS | 30.0% |
| TATATTCTACTTCCTGCAAA+TGG | - | chr4_1:63472270-63472289 | Msa0563170:five_prime_UTR | 30.0% | |
| TAGGCATATTTGCAAACAGT+TGG | + | chr4_1:63465860-63465879 | None:intergenic | 35.0% | |
| TCTCTCTGTCTGTCAAAAAA+AGG | + | chr4_1:63465896-63465915 | None:intergenic | 35.0% | |
| GGATGAAAATATCTGGTGAA+GGG | + | chr4_1:63465935-63465954 | None:intergenic | 35.0% | |
| ! | TCATCTGGGATGAAAATATC+TGG | + | chr4_1:63465942-63465961 | None:intergenic | 35.0% |
| ATAGGAGATTAAGGAGATAG+CGG | + | chr4_1:63466058-63466077 | None:intergenic | 35.0% | |
| TGGTTGCTAATAGGAGATTA+AGG | + | chr4_1:63466067-63466086 | None:intergenic | 35.0% | |
| ! | ATAAGCTACTTTCTTGCATC+TGG | + | chr4_1:63466087-63466106 | None:intergenic | 35.0% |
| GTTAGAGAGATTAAACCAAG+AGG | + | chr4_1:63466143-63466162 | None:intergenic | 35.0% | |
| ! | CTCTACTTGTTAAGTTGTGA+TGG | - | chr4_1:63466396-63466415 | Msa0563170:intron | 35.0% |
| GCTAGTTAGGTTAAGATAGT+TGG | - | chr4_1:63466476-63466495 | Msa0563170:intron | 35.0% | |
| AGATAGTTGGTTACTATTGG+GGG | - | chr4_1:63466489-63466508 | Msa0563170:intron | 35.0% | |
| AGTCGAACTGTCAAAACATT+AGG | - | chr4_1:63466528-63466547 | Msa0563170:intron | 35.0% | |
| GTCGAACTGTCAAAACATTA+GGG | - | chr4_1:63466529-63466548 | Msa0563170:intron | 35.0% | |
| CTTACAGCATCTTCAAAAAC+AGG | + | chr4_1:63466736-63466755 | None:intergenic | 35.0% | |
| TCTATATACAGTGAAGTGGA+TGG | - | chr4_1:63466794-63466813 | Msa0563170:intron | 35.0% | |
| GGTATTTATTGTCTGTTTGC+AGG | - | chr4_1:63466815-63466834 | Msa0563170:intron | 35.0% | |
| GTTCAAATAAGACTTGGATC+AGG | + | chr4_1:63466865-63466884 | None:intergenic | 35.0% | |
| CAAAGAAAAGAGACCTGTTA+TGG | + | chr4_1:63466939-63466958 | None:intergenic | 35.0% | |
| ! | CATAACAGGTCTCTTTTCTT+TGG | - | chr4_1:63466937-63466956 | Msa0563170:intron | 35.0% |
| ! | AACACTGATGGATCTATCTT+AGG | + | chr4_1:63466973-63466992 | None:intergenic | 35.0% |
| ! | ACATACTCTAAGAACACTGA+TGG | + | chr4_1:63466985-63467004 | None:intergenic | 35.0% |
| !! | CCAGAAGTATTCACTATAAG+AGG | + | chr4_1:63467084-63467103 | None:intergenic | 35.0% |
| CCTCTTATAGTGAATACTTC+TGG | - | chr4_1:63467081-63467100 | Msa0563170:intron | 35.0% | |
| TTATAGTGAATACTTCTGGC+TGG | - | chr4_1:63467085-63467104 | Msa0563170:intron | 35.0% | |
| ! | TATAGTGAATACTTCTGGCT+GGG | - | chr4_1:63467086-63467105 | Msa0563170:intron | 35.0% |
| !!! | TTGGTTTTGTCTTGCATTTC+AGG | - | chr4_1:63467240-63467259 | Msa0563170:intron | 35.0% |
| CCTATCTTAACAACATGTGT+GGG | + | chr4_1:63467309-63467328 | None:intergenic | 35.0% | |
| ATTTACCTGCTGGAAAATTC+TGG | - | chr4_1:63467358-63467377 | Msa0563170:intron | 35.0% | |
| ! | CTGGAAAATTCTGGTTAGAT+GGG | - | chr4_1:63467367-63467386 | Msa0563170:intron | 35.0% |
| ! | TGGAAAATTCTGGTTAGATG+GGG | - | chr4_1:63467368-63467387 | Msa0563170:intron | 35.0% |
| CGAGATAGATTCAGTTCTTA+AGG | - | chr4_1:63467416-63467435 | Msa0563170:intron | 35.0% | |
| TAGATTCAGTTCTTAAGGAC+CGG | - | chr4_1:63467421-63467440 | Msa0563170:intron | 35.0% | |
| GATGACATATCTGAATCACT+CGG | + | chr4_1:63467623-63467642 | None:intergenic | 35.0% | |
| GAGTGATTCAGATATGTCAT+CGG | - | chr4_1:63467622-63467641 | Msa0563170:intron | 35.0% | |
| CGAATCTTTATGCTTGCAAT+GGG | + | chr4_1:63467695-63467714 | None:intergenic | 35.0% | |
| TCGAATCTTTATGCTTGCAA+TGG | + | chr4_1:63467696-63467715 | None:intergenic | 35.0% | |
| ! | AGTTGATGCTTGTAACTTGA+TGG | - | chr4_1:63467793-63467812 | Msa0563170:intron | 35.0% |
| CGTAGAATATTTCAGAGCTT+GGG | + | chr4_1:63468121-63468140 | None:intergenic | 35.0% | |
| !! | CCAAGCTCTGAAATATTCTA+CGG | - | chr4_1:63468119-63468138 | Msa0563170:intron | 35.0% |
| !!! | TGACGACACATTTTGGAATT+TGG | + | chr4_1:63468239-63468258 | None:intergenic | 35.0% |
| ! | CAAGATATGACGACACATTT+TGG | + | chr4_1:63468246-63468265 | None:intergenic | 35.0% |
| CATATCTTGCTCTCAAATAG+AGG | - | chr4_1:63468257-63468276 | Msa0563170:intron | 35.0% | |
| ATCCAAAACAGAACACCTAT+GGG | - | chr4_1:63468308-63468327 | Msa0563170:intron | 35.0% | |
| TGACTAAATCCGATGATGTT+TGG | - | chr4_1:63468384-63468403 | Msa0563170:intron | 35.0% | |
| GACTAAATCCGATGATGTTT+GGG | - | chr4_1:63468385-63468404 | Msa0563170:intron | 35.0% | |
| TGGGATTTACTAACTGACTA+AGG | - | chr4_1:63468404-63468423 | Msa0563170:intron | 35.0% | |
| AAATACCTTCATCAGCTTGA+GGG | + | chr4_1:63468544-63468563 | None:intergenic | 35.0% | |
| TAAATACCTTCATCAGCTTG+AGG | + | chr4_1:63468545-63468564 | None:intergenic | 35.0% | |
| TATTGTATACATGCTGGGAA+TGG | + | chr4_1:63468568-63468587 | None:intergenic | 35.0% | |
| CTGGAATATTGTATACATGC+TGG | + | chr4_1:63468574-63468593 | None:intergenic | 35.0% | |
| TTGCTGATGTACTTACCAAA+GGG | + | chr4_1:63468614-63468633 | None:intergenic | 35.0% | |
| TTATCACGACAAAGTCTCAT+TGG | - | chr4_1:63468771-63468790 | Msa0563170:intron | 35.0% | |
| ATTGGAAGATCACATAGGAT+GGG | + | chr4_1:63468797-63468816 | None:intergenic | 35.0% | |
| TGAAGATTGGAAGATCACAT+AGG | + | chr4_1:63468802-63468821 | None:intergenic | 35.0% | |
| ATGTGATCTTCCAATCTTCA+CGG | - | chr4_1:63468802-63468821 | Msa0563170:intron | 35.0% | |
| TAAAGATCATCCGTGAAGAT+TGG | + | chr4_1:63468815-63468834 | None:intergenic | 35.0% | |
| CACGAAAACCACAAAATAGA+GGG | + | chr4_1:63469163-63469182 | None:intergenic | 35.0% | |
| !! | GATTTTTGTTTACGAGGCAT+TGG | + | chr4_1:63469198-63469217 | None:intergenic | 35.0% |
| ATAAAAGGATTCCTTACGCA+TGG | - | chr4_1:63469233-63469252 | Msa0563170:intron | 35.0% | |
| ATTAGAATCCAAATGTCGGA+GGG | + | chr4_1:63469394-63469413 | None:intergenic | 35.0% | |
| CTGGATATCATTCAAACTCT+CGG | - | chr4_1:63469438-63469457 | Msa0563170:intron | 35.0% | |
| GGAATATACATTTGTGGGTT+TGG | - | chr4_1:63469491-63469510 | Msa0563170:intron | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | - | chr4_1:63469518-63469537 | Msa0563170:intron | 35.0% | |
| !! | CATACGTTTGTTGGCTTTAA+CGG | - | chr4_1:63469527-63469546 | Msa0563170:intron | 35.0% |
| !! | ATACGTTTGTTGGCTTTAAC+GGG | - | chr4_1:63469528-63469547 | Msa0563170:intron | 35.0% |
| TGCATAACTAGAAGATCAGA+TGG | + | chr4_1:63469716-63469735 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr4_1:63469897-63469916 | Msa0563170:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4_1:63469941-63469960 | None:intergenic | 35.0% | |
| ATCTTGATTTCATGTGACAC+AGG | - | chr4_1:63470028-63470047 | Msa0563170:intron | 35.0% | |
| CTTACCTGCAATAAACAAGT+AGG | + | chr4_1:63470163-63470182 | None:intergenic | 35.0% | |
| ! | GTGGTGTCAAACATTAGAAA+AGG | - | chr4_1:63470317-63470336 | Msa0563170:CDS | 35.0% |
| TAATTTCATGTCATCTGCCA+TGG | - | chr4_1:63470387-63470406 | Msa0563170:CDS | 35.0% | |
| AATTTCATGTCATCTGCCAT+GGG | - | chr4_1:63470388-63470407 | Msa0563170:CDS | 35.0% | |
| !! | CTCTAAAATTATAAAGGGGC+AGG | + | chr4_1:63470430-63470449 | None:intergenic | 35.0% |
| TATATATGAGTATCAGGTCG+AGG | - | chr4_1:63470599-63470618 | Msa0563170:CDS | 35.0% | |
| ATTCTATTGTGGTCTCTGTA+TGG | + | chr4_1:63470736-63470755 | None:intergenic | 35.0% | |
| GAATGAACAGAACTGATAGA+AGG | + | chr4_1:63470805-63470824 | None:intergenic | 35.0% | |
| TCTGTTCATTCTTCTTGATG+TGG | - | chr4_1:63470814-63470833 | Msa0563170:intron | 35.0% | |
| TTACGTTTGAATCAGGAGAA+AGG | - | chr4_1:63470870-63470889 | Msa0563170:intron | 35.0% | |
| TAGGTTCTTTACTATATGGG+TGG | - | chr4_1:63471042-63471061 | Msa0563170:intron | 35.0% | |
| ! | GGTTGTTTAAGTTATCTGTC+AGG | - | chr4_1:63471092-63471111 | Msa0563170:intron | 35.0% |
| TTATTTGATTAAGAGGAGGG+GGG | - | chr4_1:63471255-63471274 | Msa0563170:intron | 35.0% | |
| ! | AATTGAGTCAGGAGAGATTT+TGG | - | chr4_1:63471388-63471407 | Msa0563170:intron | 35.0% |
| ! | ATAGTAATGGAGAGGGAAAA+TGG | + | chr4_1:63471430-63471449 | None:intergenic | 35.0% |
| !! | CACAATTATGCAAGTTTTGG+TGG | + | chr4_1:63471499-63471518 | None:intergenic | 35.0% |
| ! | AGAGGATCTTAACTTGATCT+TGG | - | chr4_1:63471556-63471575 | Msa0563170:intron | 35.0% |
| !! | GTTTAGGTTTTTGCTAGTAC+CGG | - | chr4_1:63471693-63471712 | Msa0563170:intron | 35.0% |
| AATTTGCCTCTGTATTGTTG+CGG | - | chr4_1:63472207-63472226 | Msa0563170:intron | 35.0% | |
| !! | TTGCGGGTTTGTTACAAATT+GGG | - | chr4_1:63472224-63472243 | Msa0563170:five_prime_UTR | 35.0% |
| GTTGTATTTGAACCATTTGC+AGG | + | chr4_1:63472285-63472304 | None:intergenic | 35.0% | |
| ! | AGGAGTATACCTCAGATGAA+CGG | + | chr4_1:63465763-63465782 | None:intergenic | 40.0% |
| GGGATGAAAATATCTGGTGA+AGG | + | chr4_1:63465936-63465955 | None:intergenic | 40.0% | |
| TAGGAGATTAAGGAGATAGC+GGG | + | chr4_1:63466057-63466076 | None:intergenic | 40.0% | |
| TCTTGCATCTGGTTGCTAAT+AGG | + | chr4_1:63466076-63466095 | None:intergenic | 40.0% | |
| CAAGAGGAGTAAACTCAGTT+TGG | + | chr4_1:63466127-63466146 | None:intergenic | 40.0% | |
| CAAACTGAGTTTACTCCTCT+TGG | - | chr4_1:63466125-63466144 | Msa0563170:intron | 40.0% | |
| GTTGTTTACGAAGTTACTCC+AGG | - | chr4_1:63466164-63466183 | Msa0563170:intron | 40.0% | |
| TTTACGAAGTTACTCCAGGT+AGG | - | chr4_1:63466168-63466187 | Msa0563170:intron | 40.0% | |
| TAATGGCTAGAAAACCTACC+TGG | + | chr4_1:63466185-63466204 | None:intergenic | 40.0% | |
| GATAGTTGGTTACTATTGGG+GGG | - | chr4_1:63466490-63466509 | Msa0563170:intron | 40.0% | |
| GAAGATGCTGTAAGACTCTA+AGG | - | chr4_1:63466742-63466761 | Msa0563170:intron | 40.0% | |
| ! | AATACTTCTGGCTGGGTTAA+AGG | - | chr4_1:63467093-63467112 | Msa0563170:intron | 40.0% |
| CACATAAACTACTGCTTTCC+TGG | - | chr4_1:63467181-63467200 | Msa0563170:intron | 40.0% | |
| ! | TTGTCTTGCATTTCAGGTGT+TGG | - | chr4_1:63467246-63467265 | Msa0563170:intron | 40.0% |
| CCCACACATGTTGTTAAGAT+AGG | - | chr4_1:63467306-63467325 | Msa0563170:intron | 40.0% | |
| GCCTATCTTAACAACATGTG+TGG | + | chr4_1:63467310-63467329 | None:intergenic | 40.0% | |
| ! | TCTAACCAGAATTTTCCAGC+AGG | + | chr4_1:63467366-63467385 | None:intergenic | 40.0% |
| ! | GCTGGAAAATTCTGGTTAGA+TGG | - | chr4_1:63467366-63467385 | Msa0563170:intron | 40.0% |
| ! | GATGGTAACGCGTAAGATTT+GGG | + | chr4_1:63467451-63467470 | None:intergenic | 40.0% |
| ! | AGATGGTAACGCGTAAGATT+TGG | + | chr4_1:63467452-63467471 | None:intergenic | 40.0% |
| ! | TCCTTTTGAACAAACTCCCT+GGG | + | chr4_1:63467548-63467567 | None:intergenic | 40.0% |
| TTCAGATATGTCATCGGACA+AGG | - | chr4_1:63467628-63467647 | Msa0563170:intron | 40.0% | |
| ATAAGGACAGTGAGATGTCA+AGG | + | chr4_1:63467666-63467685 | None:intergenic | 40.0% | |
| CTTGCAATGGGAACTTGATA+AGG | + | chr4_1:63467683-63467702 | None:intergenic | 40.0% | |
| TTCGAGTGATAAGGCTGTTT+AGG | + | chr4_1:63467834-63467853 | None:intergenic | 40.0% | |
| ! | CACACAACTTTCGAGTGATA+AGG | + | chr4_1:63467843-63467862 | None:intergenic | 40.0% |
| TGAGCTACCCTTTATATGCT+TGG | - | chr4_1:63467911-63467930 | Msa0563170:CDS | 40.0% | |
| CCGTAGAATATTTCAGAGCT+TGG | + | chr4_1:63468122-63468141 | None:intergenic | 40.0% | |
| AGCCAACAATACTAGCATTC+AGG | + | chr4_1:63468145-63468164 | None:intergenic | 40.0% | |
| GATCCAAAACAGAACACCTA+TGG | - | chr4_1:63468307-63468326 | Msa0563170:intron | 40.0% | |
| ! | AACCCATAGGTGTTCTGTTT+TGG | + | chr4_1:63468313-63468332 | None:intergenic | 40.0% |
| AATACCTTCATCAGCTTGAG+GGG | + | chr4_1:63468543-63468562 | None:intergenic | 40.0% | |
| CTTGCTGATGTACTTACCAA+AGG | + | chr4_1:63468615-63468634 | None:intergenic | 40.0% | |
| TTGACCCTGTGTGTTTACAT+AGG | - | chr4_1:63468635-63468654 | Msa0563170:intron | 40.0% | |
| TGACCCTGTGTGTTTACATA+GGG | - | chr4_1:63468636-63468655 | Msa0563170:intron | 40.0% | |
| ACTCCCTATGTAAACACACA+GGG | + | chr4_1:63468642-63468661 | None:intergenic | 40.0% | |
| TACTCCCTATGTAAACACAC+AGG | + | chr4_1:63468643-63468662 | None:intergenic | 40.0% | |
| AGAAAACTTGGAAAGTGGAC+TGG | + | chr4_1:63468670-63468689 | None:intergenic | 40.0% | |
| GATTGGAAGATCACATAGGA+TGG | + | chr4_1:63468798-63468817 | None:intergenic | 40.0% | |
| TTAGCCAAAGTAGTCCACAT+AGG | - | chr4_1:63468832-63468851 | Msa0563170:intron | 40.0% | |
| ! | AATGCCTATGTGGACTACTT+TGG | + | chr4_1:63468839-63468858 | None:intergenic | 40.0% |
| ! | GTTGAAGACCCTCTATTTTG+TGG | - | chr4_1:63469152-63469171 | Msa0563170:intron | 40.0% |
| GCACGAAAACCACAAAATAG+AGG | + | chr4_1:63469164-63469183 | None:intergenic | 40.0% | |
| ! | TTGTGGTTTTCGTGCCTAAA+AGG | - | chr4_1:63469169-63469188 | Msa0563170:intron | 40.0% |
| CGTACAATACACCAAATGGT+GGG | + | chr4_1:63469272-63469291 | None:intergenic | 40.0% | |
| TCTTGTGCAAAAACAGGGTA+AGG | + | chr4_1:63469298-63469317 | None:intergenic | 40.0% | |
| !!! | TTACCCTGTTTTTGCACAAG+AGG | - | chr4_1:63469297-63469316 | Msa0563170:intron | 40.0% |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr4_1:63469348-63469367 | None:intergenic | 40.0% | |
| TTAGAATCCAAATGTCGGAG+GGG | + | chr4_1:63469393-63469412 | None:intergenic | 40.0% | |
| CATTAGAATCCAAATGTCGG+AGG | + | chr4_1:63469395-63469414 | None:intergenic | 40.0% | |
| TCAAACTCTCGGTATCATTG+AGG | - | chr4_1:63469449-63469468 | Msa0563170:intron | 40.0% | |
| GGCACACAAAAAACACCAAA+AGG | - | chr4_1:63469470-63469489 | Msa0563170:intron | 40.0% | |
| !! | GTGTGATCGGCTTTAAAGAT+TGG | + | chr4_1:63469682-63469701 | None:intergenic | 40.0% |
| TGGAAATTCCGCCTTAATTG+CGG | - | chr4_1:63469755-63469774 | Msa0563170:intron | 40.0% | |
| CTAACCAAAGGTCGCAATTT+AGG | + | chr4_1:63469795-63469814 | None:intergenic | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | + | chr4_1:63469807-63469826 | None:intergenic | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr4_1:63469837-63469856 | Msa0563170:CDS | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr4_1:63469838-63469857 | Msa0563170:CDS | 40.0% |
| GAGTGTTATCTATCCGATGT+GGG | + | chr4_1:63469875-63469894 | None:intergenic | 40.0% | |
| ! | AGAGTGTTATCTATCCGATG+TGG | + | chr4_1:63469876-63469895 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4_1:63469939-63469958 | Msa0563170:intron | 40.0% |
| TTCAGAGAAACAAATGGCAC+AGG | + | chr4_1:63470103-63470122 | None:intergenic | 40.0% | |
| AAAAGTCAACCTCTTGCTAC+AGG | - | chr4_1:63470123-63470142 | Msa0563170:intron | 40.0% | |
| AAAGTCAACCTCTTGCTACA+GGG | - | chr4_1:63470124-63470143 | Msa0563170:intron | 40.0% | |
| ! | TGTTTGGGGTTTGTGTTAGA+AGG | - | chr4_1:63470551-63470570 | Msa0563170:CDS | 40.0% |
| GAGGAAACAAAGACATCTCA+AGG | + | chr4_1:63470663-63470682 | None:intergenic | 40.0% | |
| AATCTTTGGGCTTAGAGAAG+AGG | + | chr4_1:63470682-63470701 | None:intergenic | 40.0% | |
| TGGTCAAGGCTATTCTATTG+TGG | + | chr4_1:63470747-63470766 | None:intergenic | 40.0% | |
| AAATTAAGTGAACGGCGTAG+TGG | + | chr4_1:63470770-63470789 | None:intergenic | 40.0% | |
| ACTACGCCGTTCACTTAATT+TGG | - | chr4_1:63470769-63470788 | Msa0563170:intron | 40.0% | |
| CTACGCCGTTCACTTAATTT+GGG | - | chr4_1:63470770-63470789 | Msa0563170:intron | 40.0% | |
| GAGTGCCCAAATTAAGTGAA+CGG | + | chr4_1:63470778-63470797 | None:intergenic | 40.0% | |
| GAAAGGTCTGACTATGTTAG+AGG | - | chr4_1:63470887-63470906 | Msa0563170:CDS | 40.0% | |
| AGATTCTGATGAAGGTTGCT+AGG | - | chr4_1:63471023-63471042 | Msa0563170:intron | 40.0% | |
| TATTTGATTAAGAGGAGGGG+GGG | - | chr4_1:63471256-63471275 | Msa0563170:intron | 40.0% | |
| !! | AGGAGAGATTTTGGTGAGTT+AGG | - | chr4_1:63471397-63471416 | Msa0563170:intron | 40.0% |
| AATGGAGAGGGAAAATGGAA+AGG | + | chr4_1:63471425-63471444 | None:intergenic | 40.0% | |
| AATATGTCCTGCATAGGGTA+TGG | + | chr4_1:63471608-63471627 | None:intergenic | 40.0% | |
| AAGAATAGACGTGCAACTCA+AGG | + | chr4_1:63471809-63471828 | None:intergenic | 40.0% | |
| ATCCAAGTAGGGAAAGGTAA+TGG | - | chr4_1:63471958-63471977 | Msa0563170:CDS | 40.0% | |
| AACCATTACCTTTCCCTACT+TGG | + | chr4_1:63471963-63471982 | None:intergenic | 40.0% | |
| !!! | ATTGCTTCTTTTCAGGTCCA+AGG | - | chr4_1:63472050-63472069 | Msa0563170:exon | 40.0% |
| ATTTGCCTCTGTATTGTTGC+GGG | - | chr4_1:63472208-63472227 | Msa0563170:intron | 40.0% | |
| !! | GTTGCGGGTTTGTTACAAAT+TGG | - | chr4_1:63472223-63472242 | Msa0563170:five_prime_UTR | 40.0% |
| TCAGATGAACGGTGATGAGA+CGG | + | chr4_1:63465752-63465771 | None:intergenic | 45.0% | |
| ACAGACAGAGAGACAGCAAT+GGG | - | chr4_1:63465903-63465922 | Msa0563170:intron | 45.0% | |
| CAGCTTGTGACCATTCATCT+GGG | + | chr4_1:63465956-63465975 | None:intergenic | 45.0% | |
| !! | AGGCGTTGAACTGGATACAA+TGG | + | chr4_1:63465985-63466004 | None:intergenic | 45.0% |
| !! | GTTGATTTGCCAACACTTCC+GGG | + | chr4_1:63466029-63466048 | None:intergenic | 45.0% |
| !! | GGTTGATTTGCCAACACTTC+CGG | + | chr4_1:63466030-63466049 | None:intergenic | 45.0% |
| GCTTATCTTGATACCGACGT+TGG | - | chr4_1:63466101-63466120 | Msa0563170:intron | 45.0% | |
| AAACTCAGTTTGGCCAACGT+CGG | + | chr4_1:63466117-63466136 | None:intergenic | 45.0% | |
| !! | ACTATTGGGGGGTGTGTTTT+TGG | - | chr4_1:63466501-63466520 | Msa0563170:intron | 45.0% |
| !! | ATGGAAGACTTTAGAGCGAG+GGG | + | chr4_1:63466629-63466648 | None:intergenic | 45.0% |
| !! | GATGGAAGACTTTAGAGCGA+GGG | + | chr4_1:63466630-63466649 | None:intergenic | 45.0% |
| TGGTTAGATGGGGAAGATGA+TGG | - | chr4_1:63467378-63467397 | Msa0563170:intron | 45.0% | |
| ! | CCTTTTGAACAAACTCCCTG+GGG | + | chr4_1:63467547-63467566 | None:intergenic | 45.0% |
| ! | CTCCTTTTGAACAAACTCCC+TGG | + | chr4_1:63467549-63467568 | None:intergenic | 45.0% |
| ! | CAGGGAGTTTGTTCAAAAGG+AGG | - | chr4_1:63467547-63467566 | Msa0563170:intron | 45.0% |
| GATTCGACATGTTCATCGTG+AGG | - | chr4_1:63467709-63467728 | Msa0563170:intron | 45.0% | |
| CTTTCCTAAGTTCTCCACAG+CGG | - | chr4_1:63467877-63467896 | Msa0563170:CDS | 45.0% | |
| GGCCTGAATGCTAGTATTGT+TGG | - | chr4_1:63468140-63468159 | Msa0563170:intron | 45.0% | |
| ! | GCAGTTGAATCTGAAGTACC+TGG | - | chr4_1:63468167-63468186 | Msa0563170:intron | 45.0% |
| AAGTACCTGGAGATTTACCC+TGG | - | chr4_1:63468180-63468199 | Msa0563170:intron | 45.0% | |
| CAAGTTACCTACCAAGACCA+AGG | + | chr4_1:63468208-63468227 | None:intergenic | 45.0% | |
| ATACCTTCATCAGCTTGAGG+GGG | + | chr4_1:63468542-63468561 | None:intergenic | 45.0% | |
| TTCCAGAACATGGTACTGCT+TGG | - | chr4_1:63468588-63468607 | Msa0563170:intron | 45.0% | |
| TTTGTTCTGTGACGCTGCAT+TGG | - | chr4_1:63468720-63468739 | Msa0563170:intron | 45.0% | |
| ! | CACATAGGCATTTTGTGCTG+CGG | - | chr4_1:63468847-63468866 | Msa0563170:intron | 45.0% |
| GCGTACAATACACCAAATGG+TGG | + | chr4_1:63469273-63469292 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_1:63469276-63469295 | None:intergenic | 45.0% | |
| CAGCCTCTTGTGCAAAAACA+GGG | + | chr4_1:63469303-63469322 | None:intergenic | 45.0% | |
| ACAGCCTCTTGTGCAAAAAC+AGG | + | chr4_1:63469304-63469323 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr4_1:63469342-63469361 | None:intergenic | 45.0% | |
| ! | AAGGCATCACTACCTTTGCA+AGG | - | chr4_1:63469598-63469617 | Msa0563170:intron | 45.0% |
| GGACGTTTGATACCTTGCAA+AGG | + | chr4_1:63469613-63469632 | None:intergenic | 45.0% | |
| GGCTGTATGATCTGTGTGAT+CGG | + | chr4_1:63469695-63469714 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr4_1:63469830-63469849 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr4_1:63469828-63469847 | Msa0563170:CDS | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr4_1:63469833-63469852 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr4_1:63469839-63469858 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr4_1:63469836-63469855 | Msa0563170:CDS | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr4_1:63469839-63469858 | Msa0563170:CDS | 45.0% |
| !! | CAAAACCGGCTTGTAAGGTT+AGG | + | chr4_1:63469927-63469946 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_1:63469932-63469951 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_1:63469929-63469948 | Msa0563170:intron | 45.0% |
| TGTGACACAGGAATTGTGAG+AGG | - | chr4_1:63470040-63470059 | Msa0563170:intron | 45.0% | |
| !! | AGAGGCATTGACACAGTCAA+AGG | - | chr4_1:63470058-63470077 | Msa0563170:intron | 45.0% |
| TTTAGCTAGTAGAGAAGGGC+TGG | - | chr4_1:63470940-63470959 | Msa0563170:CDS | 45.0% | |
| CTTAAGATGAACGAACGACC+AGG | + | chr4_1:63471005-63471024 | None:intergenic | 45.0% | |
| GTAATAAGGAAGGGGAGTCT+TGG | - | chr4_1:63471157-63471176 | Msa0563170:intron | 45.0% | |
| !!! | CCTGACTCAATTTTGACTCG+AGG | + | chr4_1:63471380-63471399 | None:intergenic | 45.0% |
| CCTCGAGTCAAAATTGAGTC+AGG | - | chr4_1:63471377-63471396 | Msa0563170:intron | 45.0% | |
| TTCTCAACCATACCCTATGC+AGG | - | chr4_1:63471598-63471617 | Msa0563170:intron | 45.0% | |
| ! | AGGTTTAGGGTAACAGACGA+AGG | + | chr4_1:63471837-63471856 | None:intergenic | 45.0% |
| TGTAAGGTGATAAGCGTCCT+TGG | + | chr4_1:63472070-63472089 | None:intergenic | 45.0% | |
| TTCATGGAAGCAGTAGCACA+TGG | - | chr4_1:63472129-63472148 | Msa0563170:intron | 45.0% | |
| ACAAACCCGCAACAATACAG+AGG | + | chr4_1:63472216-63472235 | None:intergenic | 45.0% | |
| !!! | AATTTTTATCTTTTTATTTT+TGG | + | chr4_1:63469080-63469099 | None:intergenic | 5.0% |
| GTCTCATCACCGTTCATCTG+AGG | - | chr4_1:63465751-63465770 | Msa0563170:three_prime_UTR | 50.0% | |
| GACAGACAGAGAGACAGCAA+TGG | - | chr4_1:63465902-63465921 | Msa0563170:intron | 50.0% | |
| GCAGCTTGTGACCATTCATC+TGG | + | chr4_1:63465957-63465976 | None:intergenic | 50.0% | |
| GGTCCACAAACGAGTACAAC+GGG | + | chr4_1:63466008-63466027 | None:intergenic | 50.0% | |
| GGGTCCACAAACGAGTACAA+CGG | + | chr4_1:63466009-63466028 | None:intergenic | 50.0% | |
| GTTGTACTCGTTTGTGGACC+CGG | - | chr4_1:63466008-63466027 | Msa0563170:intron | 50.0% | |
| !! | ATTAAGGAGATAGCGGGCGA+AGG | + | chr4_1:63466051-63466070 | None:intergenic | 50.0% |
| !! | GGATGGAAGACTTTAGAGCG+AGG | + | chr4_1:63466631-63466650 | None:intergenic | 50.0% |
| CGCGTAAGATTTGGGCTTAC+CGG | + | chr4_1:63467443-63467462 | None:intergenic | 50.0% | |
| ! | CCCCAGGGAGTTTGTTCAAA+AGG | - | chr4_1:63467544-63467563 | Msa0563170:intron | 50.0% |
| CGACATGTTCATCGTGAGGT+TGG | - | chr4_1:63467713-63467732 | Msa0563170:intron | 50.0% | |
| CGCTGTGGAGAACTTAGGAA+AGG | + | chr4_1:63467879-63467898 | None:intergenic | 50.0% | |
| CGCAGCACAAAATGCCTATG+TGG | + | chr4_1:63468849-63468868 | None:intergenic | 50.0% | |
| ! | TAGGCATTTTGTGCTGCGGT+AGG | - | chr4_1:63468851-63468870 | Msa0563170:intron | 50.0% |
| GGTAGGTGCCCATGAATAGT+CGG | - | chr4_1:63468868-63468887 | Msa0563170:intron | 50.0% | |
| !! | CGCGTGTACCGACTATTCAT+GGG | + | chr4_1:63468879-63468898 | None:intergenic | 50.0% |
| !! | TCGCGTGTACCGACTATTCA+TGG | + | chr4_1:63468880-63468899 | None:intergenic | 50.0% |
| AGTTCGCAACACTACTGCCA+CGG | + | chr4_1:63469131-63469150 | None:intergenic | 50.0% | |
| !!! | CGAGGCATTGGAAGCCTTTT+AGG | + | chr4_1:63469186-63469205 | None:intergenic | 50.0% |
| AGGATTCCTTACGCATGGTC+TGG | - | chr4_1:63469238-63469257 | Msa0563170:intron | 50.0% | |
| GGATTCCTTACGCATGGTCT+GGG | - | chr4_1:63469239-63469258 | Msa0563170:intron | 50.0% | |
| ! | TTGCACAAGAGGCTGTTTCC+AGG | - | chr4_1:63469308-63469327 | Msa0563170:intron | 50.0% |
| AAGGTCACGGATTCAAGTCC+TGG | + | chr4_1:63469329-63469348 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_1:63469364-63469383 | Msa0563170:intron | 50.0% | |
| AAATGTCGGAGGGGTAACCT+TGG | + | chr4_1:63469384-63469403 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCCGACATT+TGG | - | chr4_1:63469383-63469402 | Msa0563170:intron | 50.0% | |
| GTCGCAATTTAGGCGACTAG+GGG | + | chr4_1:63469785-63469804 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | + | chr4_1:63469786-63469805 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | + | chr4_1:63469787-63469806 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | - | chr4_1:63469788-63469807 | Msa0563170:CDS | 50.0% | |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | + | chr4_1:63469818-63469837 | None:intergenic | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_1:63469859-63469878 | Msa0563170:intron | 50.0% |
| GCACTCCTAACCTTACAAGC+CGG | - | chr4_1:63469919-63469938 | Msa0563170:intron | 50.0% | |
| GGATATCACCCTGTAGCAAG+AGG | + | chr4_1:63470135-63470154 | None:intergenic | 50.0% | |
| ATCTGCCATGGGTCTGTTGT+TGG | - | chr4_1:63470399-63470418 | Msa0563170:CDS | 50.0% | |
| TCTGCCATGGGTCTGTTGTT+GGG | - | chr4_1:63470400-63470419 | Msa0563170:CDS | 50.0% | |
| TAGTCCCAACAACAGACCCA+TGG | + | chr4_1:63470407-63470426 | None:intergenic | 50.0% | |
| GGGGTTTGTGTTAGAAGGAG+TGG | - | chr4_1:63470556-63470575 | Msa0563170:CDS | 50.0% | |
| TTAAGTGAACGGCGTAGTGG+TGG | + | chr4_1:63470767-63470786 | None:intergenic | 50.0% | |
| ! | ATGTGAGAGGCTAGTTGCTC+CGG | - | chr4_1:63470965-63470984 | Msa0563170:CDS | 50.0% |
| ATAAGGAAGGGGAGTCTTGG+AGG | - | chr4_1:63471160-63471179 | Msa0563170:intron | 50.0% | |
| ACACTAATGACGGCGAGGCT+AGG | + | chr4_1:63465677-63465696 | None:intergenic | 55.0% | |
| GCGGTGAGGGACACTAATGA+CGG | + | chr4_1:63465687-63465706 | None:intergenic | 55.0% | |
| ATGAGGGAAGCTGTAGGCAG+CGG | + | chr4_1:63465717-63465736 | None:intergenic | 55.0% | |
| !! | TACAACGGGAGGCGTTGAAC+TGG | + | chr4_1:63465994-63466013 | None:intergenic | 55.0% |
| CCACAAACGAGTACAACGGG+AGG | + | chr4_1:63466005-63466024 | None:intergenic | 55.0% | |
| CCTCCCGTTGTACTCGTTTG+TGG | - | chr4_1:63466002-63466021 | Msa0563170:intron | 55.0% | |
| ! | GTTTGTGGACCCGGAAGTGT+TGG | - | chr4_1:63466017-63466036 | Msa0563170:intron | 55.0% |
| GACTCCGCTGTGGAGAACTT+AGG | + | chr4_1:63467884-63467903 | None:intergenic | 55.0% | |
| TCAGTCACAAGACTCCGCTG+TGG | + | chr4_1:63467894-63467913 | None:intergenic | 55.0% | |
| AGGCACCAGGGTAAATCTCC+AGG | + | chr4_1:63468188-63468207 | None:intergenic | 55.0% | |
| GGAGATTTACCCTGGTGCCT+TGG | - | chr4_1:63468188-63468207 | Msa0563170:intron | 55.0% | |
| TTACCCTGGTGCCTTGGTCT+TGG | - | chr4_1:63468194-63468213 | Msa0563170:intron | 55.0% | |
| ! | CTACCAAGACCAAGGCACCA+GGG | + | chr4_1:63468200-63468219 | None:intergenic | 55.0% |
| GGCCAAGCAGTACCATGTTC+TGG | + | chr4_1:63468593-63468612 | None:intergenic | 55.0% | |
| CATGGTACTGCTTGGCCCTT+TGG | - | chr4_1:63468596-63468615 | Msa0563170:intron | 55.0% | |
| TCCTTACGCATGGTCTGGGA+AGG | - | chr4_1:63469243-63469262 | Msa0563170:intron | 55.0% | |
| CCTTACGCATGGTCTGGGAA+GGG | - | chr4_1:63469244-63469263 | Msa0563170:intron | 55.0% | |
| CTTACGCATGGTCTGGGAAG+GGG | - | chr4_1:63469245-63469264 | Msa0563170:intron | 55.0% | |
| CTAGGGGCAGACCGCAATTA+AGG | + | chr4_1:63469769-63469788 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr4_1:63469842-63469861 | Msa0563170:CDS | 55.0% |
| !! | AGAAGGGCTGGCTATGTGAG+AGG | - | chr4_1:63470952-63470971 | Msa0563170:CDS | 55.0% |
| CCAGGACAGCTCTGTTCAAC+CGG | + | chr4_1:63470987-63471006 | None:intergenic | 55.0% | |
| AGGAGGGGGGGTTGAGTAAA+GGG | - | chr4_1:63471268-63471287 | Msa0563170:intron | 55.0% | |
| GAGGGACACTAATGACGGCG+AGG | + | chr4_1:63465682-63465701 | None:intergenic | 60.0% | |
| AGCTGTAGGCAGCGGAGCAA+CGG | + | chr4_1:63465709-63465728 | None:intergenic | 60.0% | |
| GCAGCGATGAGGGAAGCTGT+AGG | + | chr4_1:63465723-63465742 | None:intergenic | 60.0% | |
| ! | CCTACCAAGACCAAGGCACC+AGG | + | chr4_1:63468201-63468220 | None:intergenic | 60.0% |
| !! | CCTGGTGCCTTGGTCTTGGT+AGG | - | chr4_1:63468198-63468217 | Msa0563170:intron | 60.0% |
| GCTCCCCCTCAAGCTGATGA+AGG | - | chr4_1:63468536-63468555 | Msa0563170:intron | 60.0% | |
| TCGGTACACGCGAGAGCCTA+AGG | - | chr4_1:63468887-63468906 | Msa0563170:intron | 60.0% | |
| CCCTTCCCAGACCATGCGTA+AGG | + | chr4_1:63469247-63469266 | None:intergenic | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | - | chr4_1:63469258-63469277 | Msa0563170:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_1:63469375-63469394 | None:intergenic | 60.0% | |
| GGGGCAGACCGCAATTAAGG+CGG | + | chr4_1:63469766-63469785 | None:intergenic | 60.0% | |
| GAACGGCGTAGTGGTGGTCA+AGG | + | chr4_1:63470761-63470780 | None:intergenic | 60.0% | |
| CCGGTTGAACAGAGCTGTCC+TGG | - | chr4_1:63470984-63471003 | Msa0563170:CDS | 60.0% | |
| GAGGAGGGGGGGTTGAGTAA+AGG | - | chr4_1:63471267-63471286 | Msa0563170:intron | 60.0% | |
| GGAGGGGGGGTTGAGTAAAG+GGG | - | chr4_1:63471269-63471288 | Msa0563170:intron | 60.0% | |
| TGTAGGCAGCGGAGCAACGG+CGG | + | chr4_1:63465706-63465725 | None:intergenic | 65.0% | |
| AACGGTGATGAGACGGCGCG+CGG | + | chr4_1:63465745-63465764 | None:intergenic | 65.0% | |
| AAGGAGGCTCGTCTCCTGCG+TGG | - | chr4_1:63467563-63467582 | Msa0563170:intron | 65.0% | |
| CTCGTCTCCTGCGTGGCGAA+CGG | - | chr4_1:63467570-63467589 | Msa0563170:intron | 65.0% | |
| CCACTATCCGTTCGCCACGC+AGG | + | chr4_1:63467580-63467599 | None:intergenic | 65.0% | |
| CCTGCGTGGCGAACGGATAG+TGG | - | chr4_1:63467577-63467596 | Msa0563170:intron | 65.0% | |
| CAGCGGAGCAACGGCGGTGA+GGG | + | chr4_1:63465700-63465719 | None:intergenic | 70.0% | |
| GCAGCGGAGCAACGGCGGTG+AGG | + | chr4_1:63465701-63465720 | None:intergenic | 75.0% | |
| ACGGCGCGCGGCAGCGATGA+GGG | + | chr4_1:63465733-63465752 | None:intergenic | 75.0% | |
| ! | GACGGCGCGCGGCAGCGATG+AGG | + | chr4_1:63465734-63465753 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 63465641 | 63472344 | 63465641 | ID=Msa0563170;Name=Msa0563170 |
| chr4_1 | mRNA | 63465641 | 63472344 | 63465641 | ID=Msa0563170-mRNA-1;Parent=Msa0563170;Name=Msa0563170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=142|1|1|1|0.87|0.88|9|226|370 |
| chr4_1 | exon | 63465641 | 63465920 | 63465641 | ID=Msa0563170-mRNA-1:exon:20142;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63467808 | 63467935 | 63467808 | ID=Msa0563170-mRNA-1:exon:20141;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63469770 | 63469869 | 63469770 | ID=Msa0563170-mRNA-1:exon:20140;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63470255 | 63470435 | 63470255 | ID=Msa0563170-mRNA-1:exon:20139;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63470543 | 63470723 | 63470543 | ID=Msa0563170-mRNA-1:exon:20138;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63470871 | 63471040 | 63470871 | ID=Msa0563170-mRNA-1:exon:20137;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63471663 | 63471696 | 63471663 | ID=Msa0563170-mRNA-1:exon:20136;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63471800 | 63472074 | 63471800 | ID=Msa0563170-mRNA-1:exon:20135;Parent=Msa0563170-mRNA-1 |
| chr4_1 | exon | 63472213 | 63472344 | 63472213 | ID=Msa0563170-mRNA-1:exon:20134;Parent=Msa0563170-mRNA-1 |
| chr4_1 | five_prime_UTR | 63472213 | 63472344 | 63472213 | ID=Msa0563170-mRNA-1:five_prime_utr;Parent=Msa0563170-mRNA-1 |
| chr4_1 | five_prime_UTR | 63472065 | 63472074 | 63472065 | ID=Msa0563170-mRNA-1:five_prime_utr;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63471800 | 63472064 | 63471800 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63471663 | 63471696 | 63471663 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63470871 | 63471040 | 63470871 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63470543 | 63470723 | 63470543 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63470255 | 63470435 | 63470255 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63469770 | 63469869 | 63469770 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63467808 | 63467935 | 63467808 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | CDS | 63465867 | 63465920 | 63465867 | ID=Msa0563170-mRNA-1:cds;Parent=Msa0563170-mRNA-1 |
| chr4_1 | three_prime_UTR | 63465641 | 63465866 | 63465641 | ID=Msa0563170-mRNA-1:three_prime_utr;Parent=Msa0563170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
