Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609970 | XP_003607781.1 | 91.200 | 125 | 8 | 1 | 1 | 122 | 1 | 125 | 6.06e-64 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609970 | sp|Q9ZQ80|NDRP1_ARATH | 42.636 | 129 | 52 | 5 | 11 | 122 | 64 | 187 | 4.67e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0609970 | -0.846711 | 1.828858e-59 | -8.615850e-47 |
| Msa0000590 | Msa0609970 | 0.802690 | 4.978172e-49 | -8.615850e-47 |
| Msa0000940 | Msa0609970 | 0.817965 | 2.507960e-52 | -8.615850e-47 |
| Msa0003280 | Msa0609970 | 0.814779 | 1.295112e-51 | -8.615850e-47 |
| Msa0005000 | Msa0609970 | -0.826189 | 3.110170e-54 | -8.615850e-47 |
| Msa0006880 | Msa0609970 | 0.803429 | 3.501617e-49 | -8.615850e-47 |
| Msa0027580 | Msa0609970 | 0.817915 | 2.573648e-52 | -8.615850e-47 |
| Msa0032610 | Msa0609970 | 0.807010 | 6.228719e-50 | -8.615850e-47 |
| Msa0036370 | Msa0609970 | 0.818328 | 2.075488e-52 | -8.615850e-47 |
| Msa0038310 | Msa0609970 | 0.802140 | 6.462530e-49 | -8.615850e-47 |
| Msa0041970 | Msa0609970 | 0.822467 | 2.332398e-53 | -8.615850e-47 |
| Msa0050730 | Msa0609970 | 0.853572 | 2.187577e-61 | -8.615850e-47 |
| Msa0050760 | Msa0609970 | 0.833485 | 5.191269e-56 | -8.615850e-47 |
| Msa0053050 | Msa0609970 | -0.817466 | 3.250644e-52 | -8.615850e-47 |
| Msa0072170 | Msa0609970 | 0.846314 | 2.348523e-59 | -8.615850e-47 |
| Msa0075340 | Msa0609970 | 0.820571 | 6.391885e-53 | -8.615850e-47 |
| Msa0085720 | Msa0609970 | 0.801355 | 9.363738e-49 | -8.615850e-47 |
| Msa0086090 | Msa0609970 | 0.814407 | 1.564770e-51 | -8.615850e-47 |
| Msa0090030 | Msa0609970 | 0.846053 | 2.765524e-59 | -8.615850e-47 |
| Msa0094010 | Msa0609970 | 0.812817 | 3.502803e-51 | -8.615850e-47 |
| Msa0096940 | Msa0609970 | -0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa0098390 | Msa0609970 | -0.831992 | 1.218581e-55 | -8.615850e-47 |
| Msa0099510 | Msa0609970 | 0.815026 | 1.141260e-51 | -8.615850e-47 |
| Msa0100910 | Msa0609970 | 0.800724 | 1.260239e-48 | -8.615850e-47 |
| Msa0104610 | Msa0609970 | 0.800624 | 1.320619e-48 | -8.615850e-47 |
| Msa0106280 | Msa0609970 | 0.819698 | 1.012941e-52 | -8.615850e-47 |
| Msa0120540 | Msa0609970 | 0.853490 | 2.309004e-61 | -8.615850e-47 |
| Msa0607290 | Msa0609970 | -0.833777 | 4.388880e-56 | -8.615850e-47 |
| Msa0607510 | Msa0609970 | 0.816054 | 6.739459e-52 | -8.615850e-47 |
| Msa0609970 | Msa0614990 | 0.888464 | 5.768854e-73 | -8.615850e-47 |
| Msa0609970 | Msa0617260 | 0.818046 | 2.404809e-52 | -8.615850e-47 |
| Msa0609970 | Msa0617830 | 0.808773 | 2.626038e-50 | -8.615850e-47 |
| Msa0609970 | Msa0618200 | -0.805159 | 1.526808e-49 | -8.615850e-47 |
| Msa0609970 | Msa0622340 | 0.864563 | 1.111287e-64 | -8.615850e-47 |
| Msa0609970 | Msa0625790 | 0.807623 | 4.617716e-50 | -8.615850e-47 |
| Msa0609970 | Msa0626680 | 0.825035 | 5.836551e-54 | -8.615850e-47 |
| Msa0609970 | Msa0627910 | 0.811866 | 5.651178e-51 | -8.615850e-47 |
| Msa0609970 | Msa0628290 | 0.804196 | 2.425712e-49 | -8.615850e-47 |
| Msa0609970 | Msa0643250 | 0.808242 | 3.409526e-50 | -8.615850e-47 |
| Msa0609970 | Msa0650620 | 0.970167 | 3.303463e-131 | -8.615850e-47 |
| Msa0609970 | Msa0650650 | 0.830997 | 2.142853e-55 | -8.615850e-47 |
| Msa0609970 | Msa0650730 | 0.808167 | 3.538458e-50 | -8.615850e-47 |
| Msa0609970 | Msa0650740 | 0.841423 | 4.794511e-58 | -8.615850e-47 |
| Msa0609970 | Msa0659140 | 0.849761 | 2.627246e-60 | -8.615850e-47 |
| Msa0609970 | Msa0663900 | 0.802966 | 4.365224e-49 | -8.615850e-47 |
| Msa0609970 | Msa0664760 | 0.838041 | 3.640191e-57 | -8.615850e-47 |
| Msa0609970 | Msa0669190 | 0.806109 | 9.650796e-50 | -8.615850e-47 |
| Msa0609970 | Msa0669850 | 0.824078 | 9.806365e-54 | -8.615850e-47 |
| Msa0609970 | Msa0685380 | -0.815238 | 1.024306e-51 | -8.615850e-47 |
| Msa0609970 | Msa0692110 | 0.826506 | 2.613364e-54 | -8.615850e-47 |
| Msa0609970 | Msa0694250 | 0.830166 | 3.421404e-55 | -8.615850e-47 |
| Msa0609970 | Msa0704800 | 0.818173 | 2.250007e-52 | -8.615850e-47 |
| Msa0609970 | Msa0705600 | 0.842554 | 2.409199e-58 | -8.615850e-47 |
| Msa0609970 | Msa0711490 | 0.807633 | 4.595023e-50 | -8.615850e-47 |
| Msa0609970 | Msa0712310 | 0.802309 | 5.962679e-49 | -8.615850e-47 |
| Msa0609970 | Msa0713460 | 0.854669 | 1.055426e-61 | -8.615850e-47 |
| Msa0609970 | Msa0735310 | 0.804224 | 2.394109e-49 | -8.615850e-47 |
| Msa0609970 | Msa0735620 | -0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0609970 | Msa0737800 | 0.813827 | 2.101577e-51 | -8.615850e-47 |
| Msa0609970 | Msa0738850 | 0.825345 | 4.931406e-54 | -8.615850e-47 |
| Msa0609970 | Msa0738900 | 0.807081 | 6.015682e-50 | -8.615850e-47 |
| Msa0609970 | Msa0747720 | -0.812477 | 4.157264e-51 | -8.615850e-47 |
| Msa0609970 | Msa0787720 | 0.801201 | 1.006818e-48 | -8.615850e-47 |
| Msa0609970 | Msa0790390 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0609970 | Msa0792090 | 0.820346 | 7.200435e-53 | -8.615850e-47 |
| Msa0609970 | Msa0798810 | -0.809629 | 1.721383e-50 | -8.615850e-47 |
| Msa0609970 | Msa0799060 | 0.809978 | 1.448227e-50 | -8.615850e-47 |
| Msa0609970 | Msa0812660 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
| Msa0609970 | Msa0814250 | 0.818858 | 1.574142e-52 | -8.615850e-47 |
| Msa0609970 | Msa0814630 | -0.822185 | 2.712047e-53 | -8.615850e-47 |
| Msa0609970 | Msa0817260 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
| Msa0609970 | Msa0817270 | 0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0609970 | Msa0819390 | 0.805073 | 1.591706e-49 | -8.615850e-47 |
| Msa0609970 | Msa0820530 | -0.822973 | 1.778165e-53 | -8.615850e-47 |
| Msa0609970 | Msa0824730 | 0.815386 | 9.492712e-52 | -8.615850e-47 |
| Msa0609970 | Msa0830990 | 0.801305 | 9.588545e-49 | -8.615850e-47 |
| Msa0609970 | Msa0855160 | -0.818760 | 1.656395e-52 | -8.615850e-47 |
| Msa0609970 | Msa0859500 | 0.809701 | 1.661789e-50 | -8.615850e-47 |
| Msa0609970 | Msa0863450 | 0.805436 | 1.336133e-49 | -8.615850e-47 |
| Msa0609970 | Msa0871890 | 0.822729 | 2.026544e-53 | -8.615850e-47 |
| Msa0609970 | Msa0874500 | 0.812148 | 4.904045e-51 | -8.615850e-47 |
| Msa0609970 | Msa0876860 | -0.856923 | 2.316187e-62 | -8.615850e-47 |
| Msa0609970 | Msa0879860 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
| Msa0609970 | Msa0891600 | -0.841418 | 4.809725e-58 | -8.615850e-47 |
| Msa0609970 | Msa0893810 | 0.803324 | 3.680652e-49 | -8.615850e-47 |
| Msa0609970 | Msa0895310 | 0.817992 | 2.472815e-52 | -8.615850e-47 |
| Msa0609970 | Msa0908170 | 0.852998 | 3.194508e-61 | -8.615850e-47 |
| Msa0609970 | Msa0920550 | 0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0609970 | Msa0922540 | 0.842143 | 3.094770e-58 | -8.615850e-47 |
| Msa0609970 | Msa0924150 | -0.818765 | 1.652038e-52 | -8.615850e-47 |
| Msa0609970 | Msa0930820 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa0609970 | Msa0942730 | 0.842784 | 2.093139e-58 | -8.615850e-47 |
| Msa0609970 | Msa0944730 | 0.857156 | 1.977230e-62 | -8.615850e-47 |
| Msa0609970 | Msa0946080 | 0.824764 | 6.762070e-54 | -8.615850e-47 |
| Msa0609970 | Msa0956520 | -0.841855 | 3.688717e-58 | -8.615850e-47 |
| Msa0609970 | Msa0957450 | -0.821886 | 3.180288e-53 | -8.615850e-47 |
| Msa0609970 | Msa0958020 | 0.810251 | 1.264565e-50 | -8.615850e-47 |
| Msa0609970 | Msa0959010 | 0.840383 | 8.989444e-58 | -8.615850e-47 |
| Msa0609970 | Msa0974530 | 0.802003 | 6.894722e-49 | -8.615850e-47 |
| Msa0609970 | Msa0979120 | -0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa0609970 | Msa0982590 | 0.822906 | 1.843013e-53 | -8.615850e-47 |
| Msa0609970 | Msa0993530 | 0.837565 | 4.821584e-57 | -8.615850e-47 |
| Msa0609970 | Msa0996090 | 0.806908 | 6.546558e-50 | -8.615850e-47 |
| Msa0609970 | Msa1002040 | 0.806133 | 9.535520e-50 | -8.615850e-47 |
| Msa0609970 | Msa1002600 | -0.802997 | 4.301312e-49 | -8.615850e-47 |
| Msa0609970 | Msa1015060 | 0.835981 | 1.222657e-56 | -8.615850e-47 |
| Msa0609970 | Msa1036270 | 0.826502 | 2.618789e-54 | -8.615850e-47 |
| Msa0609970 | Msa1038210 | -0.818076 | 2.366559e-52 | -8.615850e-47 |
| Msa0609970 | Msa1047720 | 0.800357 | 1.497053e-48 | -8.615850e-47 |
| Msa0609970 | Msa1069660 | -0.838711 | 2.444249e-57 | -8.615850e-47 |
| Msa0609970 | Msa1073400 | 0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0609970 | Msa1076540 | 0.839111 | 1.926740e-57 | -8.615850e-47 |
| Msa0609970 | Msa1076600 | 0.816876 | 4.410832e-52 | -8.615850e-47 |
| Msa0609970 | Msa1087510 | -0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0609970 | Msa1089840 | 0.817352 | 3.447413e-52 | -8.615850e-47 |
| Msa0609970 | Msa1092820 | 0.838118 | 3.476504e-57 | -8.615850e-47 |
| Msa0609970 | Msa1094430 | 0.819335 | 1.225949e-52 | -8.615850e-47 |
| Msa0609970 | Msa1109570 | 0.817860 | 2.648892e-52 | -8.615850e-47 |
| Msa0609970 | Msa1113590 | 0.815322 | 9.810309e-52 | -8.615850e-47 |
| Msa0609970 | Msa1113880 | 0.801073 | 1.069612e-48 | -8.615850e-47 |
| Msa0609970 | Msa1126120 | -0.834705 | 2.568006e-56 | -8.615850e-47 |
| Msa0609970 | Msa1129400 | 0.811948 | 5.422850e-51 | -8.615850e-47 |
| Msa0609970 | Msa1130210 | -0.813835 | 2.093536e-51 | -8.615850e-47 |
| Msa0609970 | Msa1133630 | 0.814527 | 1.472427e-51 | -8.615850e-47 |
| Msa0609970 | Msa1160360 | 0.805301 | 1.426419e-49 | -8.615850e-47 |
| Msa0609970 | Msa1171770 | -0.839196 | 1.830723e-57 | -8.615850e-47 |
| Msa0609970 | Msa1174310 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0609970 | Msa1179020 | -0.814623 | 1.401975e-51 | -8.615850e-47 |
| Msa0609970 | Msa1182630 | 0.834177 | 3.484687e-56 | -8.615850e-47 |
| Msa0609970 | Msa1182640 | 0.866726 | 2.310137e-65 | -8.615850e-47 |
| Msa0609970 | Msa1193950 | -0.839054 | 1.992687e-57 | -8.615850e-47 |
| Msa0609970 | Msa1197170 | 0.812348 | 4.435878e-51 | -8.615850e-47 |
| Msa0609970 | Msa1211050 | -0.825340 | 4.945271e-54 | -8.615850e-47 |
| Msa0609970 | Msa1218650 | 0.870765 | 1.139796e-66 | -8.615850e-47 |
| Msa0609970 | Msa1219110 | 0.825635 | 4.210938e-54 | -8.615850e-47 |
| Msa0609970 | Msa1229850 | 0.818366 | 2.034993e-52 | -8.615850e-47 |
| Msa0609970 | Msa1235020 | 0.811597 | 6.466924e-51 | -8.615850e-47 |
| Msa0609970 | Msa1235630 | 0.800829 | 1.199404e-48 | -8.615850e-47 |
| Msa0609970 | Msa1236070 | -0.844518 | 7.196646e-59 | -8.615850e-47 |
| Msa0609970 | Msa1237030 | 0.805599 | 1.235215e-49 | -8.615850e-47 |
| Msa0609970 | Msa1246530 | -0.869221 | 3.643694e-66 | -8.615850e-47 |
| Msa0609970 | Msa1249920 | 0.822891 | 1.858506e-53 | -8.615850e-47 |
| Msa0609970 | Msa1253810 | 0.814436 | 1.542386e-51 | -8.615850e-47 |
| Msa0609970 | Msa1267260 | 0.802768 | 4.796817e-49 | -8.615850e-47 |
| Msa0609970 | Msa1269300 | 0.805785 | 1.128566e-49 | -8.615850e-47 |
| Msa0609970 | Msa1272520 | 0.858413 | 8.382097e-63 | -8.615850e-47 |
| Msa0609970 | Msa1282920 | 0.814215 | 1.726064e-51 | -8.615850e-47 |
| Msa0609970 | Msa1287360 | 0.827104 | 1.881213e-54 | -8.615850e-47 |
| Msa0609970 | Msa1291350 | 0.825664 | 4.142777e-54 | -8.615850e-47 |
| Msa0609970 | Msa1300860 | 0.857316 | 1.773429e-62 | -8.615850e-47 |
| Msa0609970 | Msa1303160 | 0.801545 | 8.558911e-49 | -8.615850e-47 |
| Msa0609970 | Msa1310660 | 0.865335 | 6.362580e-65 | -8.615850e-47 |
| Msa0609970 | Msa1314770 | 0.812922 | 3.322894e-51 | -8.615850e-47 |
| Msa0609970 | Msa1316170 | 0.800146 | 1.652761e-48 | -8.615850e-47 |
| Msa0609970 | Msa1327760 | 0.824052 | 9.948325e-54 | -8.615850e-47 |
| Msa0609970 | Msa1331920 | 0.805139 | 1.541708e-49 | -8.615850e-47 |
| Msa0609970 | Msa1337730 | 0.802012 | 6.864655e-49 | -8.615850e-47 |
| Msa0609970 | Msa1338610 | 0.866899 | 2.033713e-65 | -8.615850e-47 |
| Msa0609970 | Msa1350690 | 0.874177 | 8.279635e-68 | -8.615850e-47 |
| Msa0609970 | Msa1353800 | 0.818924 | 1.520274e-52 | -8.615850e-47 |
| Msa0609970 | Msa1359650 | -0.804129 | 2.504860e-49 | -8.615850e-47 |
| Msa0609970 | Msa1360280 | 0.858049 | 1.075789e-62 | -8.615850e-47 |
| Msa0609970 | Msa1363700 | 0.842060 | 3.255511e-58 | -8.615850e-47 |
| Msa0609970 | Msa1367390 | -0.818606 | 1.795229e-52 | -8.615850e-47 |
| Msa0609970 | Msa1370670 | -0.814920 | 1.204726e-51 | -8.615850e-47 |
| Msa0609970 | Msa1371090 | 0.817248 | 3.639288e-52 | -8.615850e-47 |
| Msa0609970 | Msa1373800 | 0.849183 | 3.809067e-60 | -8.615850e-47 |
| Msa0609970 | Msa1373880 | 0.818131 | 2.300855e-52 | -8.615850e-47 |
| Msa0609970 | Msa1383480 | 0.830293 | 3.186037e-55 | -8.615850e-47 |
| Msa0609970 | Msa1390310 | 0.802736 | 4.869145e-49 | -8.615850e-47 |
| Msa0609970 | Msa1393800 | 0.827847 | 1.247555e-54 | -8.615850e-47 |
| Msa0609970 | Msa1397050 | 0.810682 | 1.020657e-50 | -8.615850e-47 |
| Msa0609970 | Msa1398860 | 0.848070 | 7.744028e-60 | -8.615850e-47 |
| Msa0609970 | Msa1403580 | -0.805435 | 1.336613e-49 | -8.615850e-47 |
| Msa0609970 | Msa1404720 | 0.852906 | 3.395206e-61 | -8.615850e-47 |
| Msa0609970 | Msa1415130 | 0.807280 | 5.460397e-50 | -8.615850e-47 |
| Msa0609970 | Msa1417810 | -0.813735 | 2.201894e-51 | -8.615850e-47 |
| Msa0609970 | Msa1419110 | 0.853009 | 3.171962e-61 | -8.615850e-47 |
| Msa0609970 | Msa1422840 | 0.819018 | 1.447257e-52 | -8.615850e-47 |
| Msa0609970 | Msa1425340 | 0.820784 | 5.711135e-53 | -8.615850e-47 |
| Msa0609970 | Msa1439230 | 0.861033 | 1.363180e-63 | -8.615850e-47 |
| Msa0609970 | Msa1440600 | 0.834879 | 2.321801e-56 | -8.615850e-47 |
| Msa0609970 | Msa1442220 | -0.862640 | 4.392342e-64 | -8.615850e-47 |
| Msa0609970 | Msa1445400 | -0.816181 | 6.312578e-52 | -8.615850e-47 |
| Msa0609970 | Msa1448800 | 0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa0609970 | Msa1449350 | -0.817661 | 2.937445e-52 | -8.615850e-47 |
| Msa0609970 | Msa1452470 | 0.853070 | 3.045554e-61 | -8.615850e-47 |
| Msa0609970 | Msa1454750 | 0.807153 | 5.808229e-50 | -8.615850e-47 |
| Msa0609970 | Msa1456650 | 0.814260 | 1.686415e-51 | -8.615850e-47 |
| Msa0609970 | Msa1458030 | 0.808166 | 3.539798e-50 | -8.615850e-47 |
| Msa0609970 | Msa1465960 | 0.805624 | 1.220146e-49 | -8.615850e-47 |
| Msa0132620 | Msa0609970 | 0.848552 | 5.700159e-60 | -8.615850e-47 |
| Msa0136390 | Msa0609970 | 0.819275 | 1.264786e-52 | -8.615850e-47 |
| Msa0137040 | Msa0609970 | 0.805388 | 1.367421e-49 | -8.615850e-47 |
| Msa0140400 | Msa0609970 | 0.830591 | 2.694745e-55 | -8.615850e-47 |
| Msa0140510 | Msa0609970 | -0.803822 | 2.901800e-49 | -8.615850e-47 |
| Msa0140520 | Msa0609970 | -0.858704 | 6.861843e-63 | -8.615850e-47 |
| Msa0143080 | Msa0609970 | 0.839795 | 1.279711e-57 | -8.615850e-47 |
| Msa0145950 | Msa0609970 | 0.832310 | 1.017102e-55 | -8.615850e-47 |
| Msa0148120 | Msa0609970 | 0.814614 | 1.408591e-51 | -8.615850e-47 |
| Msa0152840 | Msa0609970 | 0.850588 | 1.540933e-60 | -8.615850e-47 |
| Msa0154770 | Msa0609970 | 0.814839 | 1.256041e-51 | -8.615850e-47 |
| Msa0165900 | Msa0609970 | 0.811015 | 8.646913e-51 | -8.615850e-47 |
| Msa0168640 | Msa0609970 | -0.805550 | 1.264648e-49 | -8.615850e-47 |
| Msa0173330 | Msa0609970 | 0.828468 | 8.841170e-55 | -8.615850e-47 |
| Msa0178990 | Msa0609970 | 0.831626 | 1.500679e-55 | -8.615850e-47 |
| Msa0182280 | Msa0609970 | 0.813705 | 2.236321e-51 | -8.615850e-47 |
| Msa0183460 | Msa0609970 | 0.826910 | 2.092651e-54 | -8.615850e-47 |
| Msa0186310 | Msa0609970 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0194970 | Msa0609970 | 0.812024 | 5.221092e-51 | -8.615850e-47 |
| Msa0198940 | Msa0609970 | 0.810590 | 1.068583e-50 | -8.615850e-47 |
| Msa0208810 | Msa0609970 | 0.834720 | 2.545624e-56 | -8.615850e-47 |
| Msa0212750 | Msa0609970 | -0.892455 | 1.562695e-74 | -8.615850e-47 |
| Msa0219250 | Msa0609970 | -0.827595 | 1.434099e-54 | -8.615850e-47 |
| Msa0223100 | Msa0609970 | 0.834396 | 3.071720e-56 | -8.615850e-47 |
| Msa0223290 | Msa0609970 | 0.843957 | 1.017738e-58 | -8.615850e-47 |
| Msa0223380 | Msa0609970 | 0.814508 | 1.486329e-51 | -8.615850e-47 |
| Msa0227310 | Msa0609970 | -0.832248 | 1.053732e-55 | -8.615850e-47 |
| Msa0236980 | Msa0609970 | 0.847881 | 8.736590e-60 | -8.615850e-47 |
| Msa0370310 | Msa0609970 | 0.829521 | 4.914525e-55 | -8.615850e-47 |
| Msa0370870 | Msa0609970 | 0.806401 | 8.373648e-50 | -8.615850e-47 |
| Msa0374250 | Msa0609970 | 0.804923 | 1.710878e-49 | -8.615850e-47 |
| Msa0377530 | Msa0609970 | 0.836471 | 9.179214e-57 | -8.615850e-47 |
| Msa0380040 | Msa0609970 | 0.800389 | 1.474940e-48 | -8.615850e-47 |
| Msa0387910 | Msa0609970 | 0.804364 | 2.238766e-49 | -8.615850e-47 |
| Msa0388030 | Msa0609970 | -0.805764 | 1.140314e-49 | -8.615850e-47 |
| Msa0403190 | Msa0609970 | 0.862776 | 3.988225e-64 | -8.615850e-47 |
| Msa0404700 | Msa0609970 | 0.856359 | 3.393310e-62 | -8.615850e-47 |
| Msa0414950 | Msa0609970 | -0.805282 | 1.439476e-49 | -8.615850e-47 |
| Msa0416320 | Msa0609970 | 0.828131 | 1.066246e-54 | -8.615850e-47 |
| Msa0419640 | Msa0609970 | -0.853203 | 2.791212e-61 | -8.615850e-47 |
| Msa0426810 | Msa0609970 | 0.863244 | 2.857954e-64 | -8.615850e-47 |
| Msa0429290 | Msa0609970 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0436190 | Msa0609970 | 0.805052 | 1.607627e-49 | -8.615850e-47 |
| Msa0449820 | Msa0609970 | 0.865960 | 4.041705e-65 | -8.615850e-47 |
| Msa0449830 | Msa0609970 | 0.801970 | 7.004348e-49 | -8.615850e-47 |
| Msa0462540 | Msa0609970 | 0.845928 | 2.990417e-59 | -8.615850e-47 |
| Msa0464900 | Msa0609970 | 0.838550 | 2.690206e-57 | -8.615850e-47 |
| Msa0469790 | Msa0609970 | 0.814747 | 1.316391e-51 | -8.615850e-47 |
| Msa0469910 | Msa0609970 | -0.854908 | 8.995896e-62 | -8.615850e-47 |
| Msa0471790 | Msa0609970 | 0.838300 | 3.120339e-57 | -8.615850e-47 |
| Msa0239940 | Msa0609970 | 0.849232 | 3.691061e-60 | -8.615850e-47 |
| Msa0241740 | Msa0609970 | 0.836928 | 7.018687e-57 | -8.615850e-47 |
| Msa0242680 | Msa0609970 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0250670 | Msa0609970 | 0.814433 | 1.544646e-51 | -8.615850e-47 |
| Msa0258880 | Msa0609970 | -0.823884 | 1.089191e-53 | -8.615850e-47 |
| Msa0259330 | Msa0609970 | 0.808380 | 3.186612e-50 | -8.615850e-47 |
| Msa0266210 | Msa0609970 | 0.874986 | 4.395614e-68 | -8.615850e-47 |
| Msa0267870 | Msa0609970 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa0275400 | Msa0609970 | -0.862223 | 5.900420e-64 | -8.615850e-47 |
| Msa0279210 | Msa0609970 | -0.825185 | 5.380562e-54 | -8.615850e-47 |
| Msa0287670 | Msa0609970 | 0.875153 | 3.855545e-68 | -8.615850e-47 |
| Msa0288730 | Msa0609970 | 0.827356 | 1.636749e-54 | -8.615850e-47 |
| Msa0289400 | Msa0609970 | 0.851212 | 1.028391e-60 | -8.615850e-47 |
| Msa0295000 | Msa0609970 | -0.833694 | 4.603918e-56 | -8.615850e-47 |
| Msa0302650 | Msa0609970 | 0.862953 | 3.515935e-64 | -8.615850e-47 |
| Msa0304700 | Msa0609970 | 0.803717 | 3.051561e-49 | -8.615850e-47 |
| Msa0308200 | Msa0609970 | 0.830711 | 2.517429e-55 | -8.615850e-47 |
| Msa0308220 | Msa0609970 | 0.854785 | 9.768934e-62 | -8.615850e-47 |
| Msa0310410 | Msa0609970 | 0.812356 | 4.417958e-51 | -8.615850e-47 |
| Msa0318970 | Msa0609970 | -0.807492 | 4.923001e-50 | -8.615850e-47 |
| Msa0327410 | Msa0609970 | 0.825988 | 3.470526e-54 | -8.615850e-47 |
| Msa0328210 | Msa0609970 | 0.851605 | 7.961074e-61 | -8.615850e-47 |
| Msa0362060 | Msa0609970 | 0.859173 | 4.968694e-63 | -8.615850e-47 |
| Msa0363100 | Msa0609970 | 0.802129 | 6.495101e-49 | -8.615850e-47 |
| Msa0363170 | Msa0609970 | 0.841292 | 5.190376e-58 | -8.615850e-47 |
| Msa0489610 | Msa0609970 | 0.828050 | 1.114987e-54 | -8.615850e-47 |
| Msa0493920 | Msa0609970 | 0.813571 | 2.392676e-51 | -8.615850e-47 |
| Msa0505060 | Msa0609970 | 0.858994 | 5.618435e-63 | -8.615850e-47 |
| Msa0517490 | Msa0609970 | 0.823982 | 1.032773e-53 | -8.615850e-47 |
| Msa0519220 | Msa0609970 | 0.802283 | 6.038319e-49 | -8.615850e-47 |
| Msa0524200 | Msa0609970 | -0.827066 | 1.920221e-54 | -8.615850e-47 |
| Msa0524600 | Msa0609970 | 0.805901 | 1.067032e-49 | -8.615850e-47 |
| Msa0534080 | Msa0609970 | 0.800651 | 1.304262e-48 | -8.615850e-47 |
| Msa0547400 | Msa0609970 | 0.802910 | 4.483941e-49 | -8.615850e-47 |
| Msa0554180 | Msa0609970 | -0.837053 | 6.522394e-57 | -8.615850e-47 |
| Msa0563170 | Msa0609970 | -0.803299 | 3.724458e-49 | -8.615850e-47 |
| Msa0565620 | Msa0609970 | -0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa0575990 | Msa0609970 | -0.821815 | 3.304326e-53 | -8.615850e-47 |
| Msa0576100 | Msa0609970 | -0.825787 | 3.874757e-54 | -8.615850e-47 |
| Msa0578090 | Msa0609970 | 0.838562 | 2.671989e-57 | -8.615850e-47 |
| Msa0579340 | Msa0609970 | 0.843462 | 1.380944e-58 | -8.615850e-47 |
| Msa0579350 | Msa0609970 | 0.818379 | 2.021324e-52 | -8.615850e-47 |
| Msa0579370 | Msa0609970 | 0.855279 | 7.020147e-62 | -8.615850e-47 |
| Msa0581920 | Msa0609970 | 0.815472 | 9.083446e-52 | -8.615850e-47 |
| Msa0586850 | Msa0609970 | 0.837912 | 3.928445e-57 | -8.615850e-47 |
| Msa0590650 | Msa0609970 | 0.800848 | 1.188756e-48 | -8.615850e-47 |
| Msa0591770 | Msa0609970 | 0.800065 | 1.716649e-48 | -8.615850e-47 |
| Msa0602120 | Msa0609970 | 0.801340 | 9.427692e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609970 | MtrunA17_Chr4g0042961 | 91.200 | 125 | 8 | 1 | 1 | 122 | 1 | 125 | 5.57e-68 | 200 |
| Msa0609970 | MtrunA17_Chr4g0042951 | 66.667 | 132 | 31 | 4 | 3 | 122 | 11 | 141 | 1.75e-40 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0609970 | AT2G03440.1 | 42.636 | 129 | 52 | 5 | 11 | 122 | 64 | 187 | 4.74e-14 | 65.5 |
| Msa0609970 | AT1G13930.3 | 48.062 | 129 | 47 | 8 | 8 | 122 | 33 | 155 | 2.28e-13 | 63.2 |
| Msa0609970 | AT1G13930.1 | 48.062 | 129 | 47 | 8 | 8 | 122 | 33 | 155 | 2.28e-13 | 63.2 |
| Msa0609970 | AT1G13930.2 | 48.062 | 129 | 47 | 8 | 8 | 122 | 33 | 155 | 2.28e-13 | 63.2 |
Find 25 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCAACCAGTGAGCTTA+TGG | 0.299153 | 4_2:+57567181 | Msa0609970:CDS |
| AGGCAGCACAGTCAGGTTTC+GGG | 0.304942 | 4_2:+57567225 | Msa0609970:CDS |
| GAGGCAGCACAGTCAGGTTT+CGG | 0.309235 | 4_2:+57567224 | Msa0609970:CDS |
| CCACCTGATCCTCCACCTTC+AGG | 0.341637 | 4_2:-57567455 | None:intergenic |
| AGTTGGTCAGTATGCTAAAT+TGG | 0.398975 | 4_2:+57567301 | Msa0609970:CDS |
| AAGCCTGAAGGTGGAGGATC+AGG | 0.423090 | 4_2:+57567452 | Msa0609970:CDS |
| TGCACTTGCCATAAGCTCAC+TGG | 0.466727 | 4_2:-57567189 | None:intergenic |
| AGCTGCTGATTATCTGCATA+AGG | 0.469713 | 4_2:+57567358 | Msa0609970:CDS |
| GGTGGAGGATCAGGTGGACT+AGG | 0.476662 | 4_2:+57567461 | Msa0609970:CDS |
| GACAAGACAGCAGAAGCTGC+AGG | 0.506059 | 4_2:+57567263 | Msa0609970:CDS |
| GTAGCAGAGGCAGCACAGTC+AGG | 0.527765 | 4_2:+57567218 | Msa0609970:CDS |
| TGATCTGCAGGTTTAGAAGC+TGG | 0.532370 | 4_2:-57567407 | None:intergenic |
| AAGGTTGAGAACACTACTAC+TGG | 0.547092 | 4_2:+57567377 | Msa0609970:CDS |
| AAGTGCAAAGGTGGTAGCAG+AGG | 0.549500 | 4_2:+57567205 | Msa0609970:CDS |
| TTGGATGAACAGAAAGGTGT+AGG | 0.558648 | 4_2:+57567320 | Msa0609970:CDS |
| GCTAAATTGGATGAACAGAA+AGG | 0.567227 | 4_2:+57567314 | Msa0609970:CDS |
| CCTGAAGGTGGAGGATCAGG+TGG | 0.601078 | 4_2:+57567455 | Msa0609970:CDS |
| TGAGCTTATGGCAAGTGCAA+AGG | 0.606848 | 4_2:+57567193 | Msa0609970:CDS |
| GGAGGATCAGGTGGACTAGG+TGG | 0.611533 | 4_2:+57567464 | Msa0609970:CDS |
| GCTTATGGCAAGTGCAAAGG+TGG | 0.622253 | 4_2:+57567196 | Msa0609970:CDS |
| GGTGATCTTCTAGATGCAGT+TGG | 0.625884 | 4_2:+57567284 | Msa0609970:CDS |
| GTTGCTAAGCCTGAAGGTGG+AGG | 0.637775 | 4_2:+57567446 | Msa0609970:CDS |
| TCTGCAGGTTTAGAAGCTGG+TGG | 0.662750 | 4_2:-57567404 | None:intergenic |
| GATGATGTTGCTAAGCCTGA+AGG | 0.667542 | 4_2:+57567440 | Msa0609970:CDS |
| GATGTTGCTAAGCCTGAAGG+TGG | 0.674394 | 4_2:+57567443 | Msa0609970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGCAACATCATCACTTTT+AGG | - | chr4_2:57567434-57567453 | None:intergenic | 30.0% |
| AGTTGGTCAGTATGCTAAAT+TGG | + | chr4_2:57567301-57567320 | Msa0609970:CDS | 35.0% | |
| GCTAAATTGGATGAACAGAA+AGG | + | chr4_2:57567314-57567333 | Msa0609970:CDS | 35.0% | |
| GATTTCAACCAGTGAGCTTA+TGG | + | chr4_2:57567181-57567200 | Msa0609970:CDS | 40.0% | |
| ! | TTGGATGAACAGAAAGGTGT+AGG | + | chr4_2:57567320-57567339 | Msa0609970:CDS | 40.0% |
| ! | AGCTGCTGATTATCTGCATA+AGG | + | chr4_2:57567358-57567377 | Msa0609970:CDS | 40.0% |
| AAGGTTGAGAACACTACTAC+TGG | + | chr4_2:57567377-57567396 | Msa0609970:CDS | 40.0% | |
| ! | ACTAGGTGGTGATTTTGCTA+AGG | + | chr4_2:57567478-57567497 | Msa0609970:CDS | 40.0% |
| TGAGCTTATGGCAAGTGCAA+AGG | + | chr4_2:57567193-57567212 | Msa0609970:CDS | 45.0% | |
| GGTGATCTTCTAGATGCAGT+TGG | + | chr4_2:57567284-57567303 | Msa0609970:CDS | 45.0% | |
| TGATCTGCAGGTTTAGAAGC+TGG | - | chr4_2:57567410-57567429 | None:intergenic | 45.0% | |
| !! | TCACTTTTAGGCTGATCTGC+AGG | - | chr4_2:57567422-57567441 | None:intergenic | 45.0% |
| GATGATGTTGCTAAGCCTGA+AGG | + | chr4_2:57567440-57567459 | Msa0609970:CDS | 45.0% | |
| ! | GGTGATTTTGCTAAGGTTGC+TGG | + | chr4_2:57567485-57567504 | Msa0609970:CDS | 45.0% |
| ! | GATTTTGCTAAGGTTGCTGG+AGG | + | chr4_2:57567488-57567507 | Msa0609970:CDS | 45.0% |
| TGCACTTGCCATAAGCTCAC+TGG | - | chr4_2:57567192-57567211 | None:intergenic | 50.0% | |
| GCTTATGGCAAGTGCAAAGG+TGG | + | chr4_2:57567196-57567215 | Msa0609970:CDS | 50.0% | |
| AAGTGCAAAGGTGGTAGCAG+AGG | + | chr4_2:57567205-57567224 | Msa0609970:CDS | 50.0% | |
| TCTGCAGGTTTAGAAGCTGG+TGG | - | chr4_2:57567407-57567426 | None:intergenic | 50.0% | |
| GATGTTGCTAAGCCTGAAGG+TGG | + | chr4_2:57567443-57567462 | Msa0609970:CDS | 50.0% | |
| GAGGCAGCACAGTCAGGTTT+CGG | + | chr4_2:57567224-57567243 | Msa0609970:CDS | 55.0% | |
| AGGCAGCACAGTCAGGTTTC+GGG | + | chr4_2:57567225-57567244 | Msa0609970:CDS | 55.0% | |
| GACAAGACAGCAGAAGCTGC+AGG | + | chr4_2:57567263-57567282 | Msa0609970:CDS | 55.0% | |
| GTTGCTAAGCCTGAAGGTGG+AGG | + | chr4_2:57567446-57567465 | Msa0609970:CDS | 55.0% | |
| AAGCCTGAAGGTGGAGGATC+AGG | + | chr4_2:57567452-57567471 | Msa0609970:CDS | 55.0% | |
| GTAGCAGAGGCAGCACAGTC+AGG | + | chr4_2:57567218-57567237 | Msa0609970:CDS | 60.0% | |
| CCACCTGATCCTCCACCTTC+AGG | - | chr4_2:57567458-57567477 | None:intergenic | 60.0% | |
| CCTGAAGGTGGAGGATCAGG+TGG | + | chr4_2:57567455-57567474 | Msa0609970:CDS | 60.0% | |
| ! | GGTGGAGGATCAGGTGGACT+AGG | + | chr4_2:57567461-57567480 | Msa0609970:CDS | 60.0% |
| !! | GGAGGATCAGGTGGACTAGG+TGG | + | chr4_2:57567464-57567483 | Msa0609970:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 57567155 | 57567523 | 57567155 | ID=Msa0609970;Name=Msa0609970 |
| chr4_2 | mRNA | 57567155 | 57567523 | 57567155 | ID=Msa0609970-mRNA-1;Parent=Msa0609970;Name=Msa0609970-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|122 |
| chr4_2 | exon | 57567155 | 57567523 | 57567155 | ID=Msa0609970-mRNA-1:exon:14958;Parent=Msa0609970-mRNA-1 |
| chr4_2 | CDS | 57567155 | 57567523 | 57567155 | ID=Msa0609970-mRNA-1:cds;Parent=Msa0609970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
