Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566040 | XP_003629937.3 | 97.727 | 572 | 7 | 2 | 64 | 634 | 44 | 610 | 0.0 | 1116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566040 | sp|Q8RVL2|DEK1_ARATH | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566040 | A0A396GNS1 | 97.727 | 572 | 7 | 2 | 64 | 634 | 44 | 610 | 0.0 | 1116 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222160 | Msa0566040 | 0.813223 | 2.853548e-51 | -8.615850e-47 |
| Msa0263680 | Msa0566040 | 0.814651 | 1.381981e-51 | -8.615850e-47 |
| Msa0301590 | Msa0566040 | 0.806603 | 7.592995e-50 | -8.615850e-47 |
| Msa0338960 | Msa0566040 | 0.817295 | 3.550851e-52 | -8.615850e-47 |
| Msa0554680 | Msa0566040 | 0.807348 | 5.281546e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566040 | MtrunA17_Chr8g0380521 | 97.727 | 572 | 7 | 2 | 64 | 634 | 44 | 610 | 0.0 | 1116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566040 | AT1G55350.5 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 781 |
| Msa0566040 | AT1G55350.6 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
| Msa0566040 | AT1G55350.3 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
| Msa0566040 | AT1G55350.2 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
| Msa0566040 | AT1G55350.1 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
| Msa0566040 | AT1G55350.4 | 72.586 | 580 | 135 | 7 | 64 | 634 | 43 | 607 | 0.0 | 780 |
Find 180 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAACATCATAGCAAAATT+TGG | 0.149736 | 4_1:-67011145 | None:intergenic |
| TCTCTTCTTTCTCCATTCTT+TGG | 0.158656 | 4_1:+67004428 | Msa0566040:CDS |
| ACAACCATTGGATTTGAATT+TGG | 0.166633 | 4_1:+67011009 | Msa0566040:CDS |
| CCATTCTTTGGGCTGTTAAT+TGG | 0.193845 | 4_1:+67004440 | Msa0566040:CDS |
| CTCTTCTTTCTCCATTCTTT+GGG | 0.195479 | 4_1:+67004429 | Msa0566040:CDS |
| TCTGTTGCTGTTATTATTCT+TGG | 0.219672 | 4_1:+67010121 | Msa0566040:CDS |
| ATCATCTGATGAAAGAAATT+TGG | 0.226659 | 4_1:+67010901 | Msa0566040:CDS |
| TGAGGCCCTTGCAAGATATT+TGG | 0.229218 | 4_1:-67007277 | None:intergenic |
| AATTATTGTGCTTATCATTT+GGG | 0.231367 | 4_1:+67007357 | Msa0566040:CDS |
| CATCTTGTTCTTCTCTATCT+TGG | 0.232497 | 4_1:+67010017 | Msa0566040:CDS |
| GGCTGGAACTGCTCTCTTAT+TGG | 0.247132 | 4_1:+67007435 | Msa0566040:CDS |
| CAATTATTGTGCTTATCATT+TGG | 0.253379 | 4_1:+67007356 | Msa0566040:CDS |
| TGCTGTTTCTCGCCATTTAT+CGG | 0.261588 | 4_1:+67010526 | Msa0566040:CDS |
| TGGGTCCCTCTTCTCCGTTT+TGG | 0.268255 | 4_1:+67004402 | Msa0566040:CDS |
| GGAGACCCTGGCGAATTTAT+AGG | 0.281153 | 4_1:+67004461 | Msa0566040:CDS |
| CGGGTGTTTCTTATTTGTTT+TGG | 0.283066 | 4_1:+67010350 | Msa0566040:CDS |
| CTGTATCAGTTATGCTGTTA+TGG | 0.293756 | 4_1:+67010484 | Msa0566040:CDS |
| TTCTTTCTTGCGCGATTTGT+GGG | 0.296286 | 4_1:+67004383 | Msa0566040:CDS |
| GATTGGTTTGGCTGTAATAA+TGG | 0.296319 | 4_1:+67007414 | Msa0566040:CDS |
| TGTCGAGGATATAATTCATT+TGG | 0.300879 | 4_1:-67009672 | None:intergenic |
| TCATTTGGGTTTGGTGGTTC+AGG | 0.305752 | 4_1:-67009657 | None:intergenic |
| CAAATGATAAGCACAATAAT+TGG | 0.307151 | 4_1:-67007355 | None:intergenic |
| TCCGACCGATATTCTCCTTC+TGG | 0.307747 | 4_1:+67009195 | Msa0566040:CDS |
| CTTCTTTCTTGCGCGATTTG+TGG | 0.308656 | 4_1:+67004382 | Msa0566040:CDS |
| AGGGGTCTGGCTGCAGGTGA+TGG | 0.308771 | 4_1:+67010728 | Msa0566040:CDS |
| ATCCTGGTTGGTTGTAATAT+TGG | 0.315787 | 4_1:+67007381 | Msa0566040:CDS |
| ATGGATTTGTAACCGATAAA+TGG | 0.316480 | 4_1:-67010538 | None:intergenic |
| AGTAGTTTATTACAAGATAA+AGG | 0.318222 | 4_1:+67011115 | Msa0566040:CDS |
| TTGTCATGTAGACTGGAATA+TGG | 0.319401 | 4_1:+67010259 | Msa0566040:intron |
| TCAGATGATATTCCAACTTC+AGG | 0.337922 | 4_1:-67010887 | None:intergenic |
| GCATCTCTCCTTGCAGCTAA+TGG | 0.348823 | 4_1:-67010557 | None:intergenic |
| GGCTTATTTGCATCACTTAA+CGG | 0.353211 | 4_1:+67011350 | Msa0566040:CDS |
| GAGGGTGTATGTAGAAGAAA+TGG | 0.359754 | 4_1:+67004336 | Msa0566040:five_prime_UTR |
| CAGCTCACGGTCACCTTGTC+TGG | 0.363690 | 4_1:-67011092 | None:intergenic |
| TGTAATAATGCCAGGATAGT+TGG | 0.365698 | 4_1:-67011190 | None:intergenic |
| TCAGATAATGAAATCTGATT+AGG | 0.369751 | 4_1:-67011283 | None:intergenic |
| TGCTTATCATTTGGGGATCC+TGG | 0.370849 | 4_1:+67007365 | Msa0566040:CDS |
| TAGGGTTTGAGAGTGAAGTT+AGG | 0.374871 | 4_1:-67004197 | None:intergenic |
| GTCTCAAACTGCTAGTTTGC+CGG | 0.376130 | 4_1:+67010772 | Msa0566040:CDS |
| GTCGAGGATATAATTCATTT+GGG | 0.379865 | 4_1:-67009671 | None:intergenic |
| GGATATAATTCATTTGGGTT+TGG | 0.383243 | 4_1:-67009666 | None:intergenic |
| TAACGGCAAAGGAGGAAAAT+TGG | 0.386734 | 4_1:+67010083 | Msa0566040:CDS |
| GCTTATTTGCATCACTTAAC+GGG | 0.392066 | 4_1:+67011351 | Msa0566040:exon |
| TGTGCAGTATATGTCACAAC+TGG | 0.397332 | 4_1:+67009162 | Msa0566040:CDS |
| GGGGTCTGGCTGCAGGTGAT+GGG | 0.399863 | 4_1:+67010729 | Msa0566040:CDS |
| TGGCTCTTGCATTTCAAGAA+AGG | 0.401858 | 4_1:+67011029 | Msa0566040:CDS |
| AGTGTTGAAGCTGGTAATCT+TGG | 0.402756 | 4_1:+67010686 | Msa0566040:CDS |
| GATGAGAGTGAGAAAAGAAA+AGG | 0.403164 | 4_1:-67004130 | None:intergenic |
| AGATGAGCATAGTGTGTAAG+AGG | 0.407282 | 4_1:+67004027 | Msa0566040:five_prime_UTR |
| CACTATCTCACCATGACAAC+CGG | 0.409146 | 4_1:-67005035 | None:intergenic |
| CAGACCACGCTGAAAGGTTC+AGG | 0.415885 | 4_1:-67007321 | None:intergenic |
| TTATGCATGTGAAGAAGAAA+TGG | 0.416660 | 4_1:-67004279 | None:intergenic |
| GCTGGATCTTTGCTCGGAAA+TGG | 0.422898 | 4_1:+67007254 | Msa0566040:intron |
| TTCAGCATTGTAGCAATCCT+AGG | 0.425328 | 4_1:-67011061 | None:intergenic |
| TATAATTCATTTGGGTTTGG+TGG | 0.425798 | 4_1:-67009663 | None:intergenic |
| AGAAATGGCTTCAGTTGTGC+AGG | 0.426330 | 4_1:+67011329 | Msa0566040:CDS |
| AATATGGGAGCTTGCCTGTA+TGG | 0.428184 | 4_1:+67010275 | Msa0566040:CDS |
| TATATCCTCGACAATCTAGA+AGG | 0.428410 | 4_1:+67009682 | Msa0566040:CDS |
| GTTGTTGTTGAAGAGTGAAA+TGG | 0.431749 | 4_1:-67004243 | None:intergenic |
| CTGCAGGTGATGGGAGCAAT+TGG | 0.435490 | 4_1:+67010738 | Msa0566040:CDS |
| ATTTGCAGAATGGTATTCAA+TGG | 0.438111 | 4_1:+67009267 | Msa0566040:CDS |
| CATGCTATTTATTTGCAGAA+TGG | 0.440675 | 4_1:+67009257 | Msa0566040:CDS |
| ATGAGAGTGAGAAAAGAAAA+GGG | 0.440912 | 4_1:-67004129 | None:intergenic |
| GCTAGCAGGGGTCTGGCTGC+AGG | 0.443087 | 4_1:+67010722 | Msa0566040:CDS |
| TGAATTGAATTTGATATAGT+TGG | 0.444874 | 4_1:+67003990 | Msa0566040:five_prime_UTR |
| CATTGAAGCTAGCAGGGGTC+TGG | 0.445011 | 4_1:+67010715 | Msa0566040:CDS |
| TCAGGAAACCACAGAGCAAA+TGG | 0.448166 | 4_1:-67007303 | None:intergenic |
| TTAGTATACTCCATCTTGTA+TGG | 0.453833 | 4_1:+67010058 | Msa0566040:CDS |
| AGGGTTTGAGAGTGAAGTTA+GGG | 0.454309 | 4_1:-67004196 | None:intergenic |
| AGAAACCCAAAACGGAGAAG+AGG | 0.457274 | 4_1:-67004408 | None:intergenic |
| GGATCGACACCTGATTGGTT+TGG | 0.458072 | 4_1:+67007402 | Msa0566040:CDS |
| TTCATGAGCAGCTGAGCGAC+AGG | 0.462921 | 4_1:-67010864 | None:intergenic |
| TATGCATGTGAAGAAGAAAT+GGG | 0.464415 | 4_1:-67004278 | None:intergenic |
| GGCTACATGGGCTTGAGAAA+TGG | 0.466056 | 4_1:+67011314 | Msa0566040:CDS |
| CTCTGCAAATCAACAACCAT+TGG | 0.466796 | 4_1:+67010997 | Msa0566040:CDS |
| AAGTTTGAAGCTTGAAGCTA+GGG | 0.467604 | 4_1:-67004215 | None:intergenic |
| ATATTGGATCGACACCTGAT+TGG | 0.467811 | 4_1:+67007397 | Msa0566040:CDS |
| GAAGTTTGAAGCTTGAAGCT+AGG | 0.467980 | 4_1:-67004216 | None:intergenic |
| GAAATGTCATTGAAGCTAGC+AGG | 0.470651 | 4_1:+67010708 | Msa0566040:CDS |
| CCAATTAACAGCCCAAAGAA+TGG | 0.473167 | 4_1:-67004440 | None:intergenic |
| TGTTCATTGCTGGAACATCT+CGG | 0.473993 | 4_1:+67010330 | Msa0566040:CDS |
| GCTGCTCATGAACCTGAAGT+TGG | 0.476054 | 4_1:+67010875 | Msa0566040:CDS |
| TACAAATCTGCTTATTCTGA+TGG | 0.476817 | 4_1:+67009606 | Msa0566040:CDS |
| GTTCATTGCTGGAACATCTC+GGG | 0.479559 | 4_1:+67010331 | Msa0566040:CDS |
| TTGTTGTTGAAGAGTGAAAT+GGG | 0.484811 | 4_1:-67004242 | None:intergenic |
| TGCTTATTCTGATGGTATTG+AGG | 0.488377 | 4_1:+67009614 | Msa0566040:CDS |
| TGAATACCTATAAATTCGCC+AGG | 0.490216 | 4_1:-67004467 | None:intergenic |
| GGCAAAGGAGGAAAATTGGC+TGG | 0.494521 | 4_1:+67010087 | Msa0566040:CDS |
| ATATACTGCACAAAGCTCAT+AGG | 0.496027 | 4_1:-67009151 | None:intergenic |
| GTTGCCGTATTGTTCATTGC+TGG | 0.497904 | 4_1:+67010320 | Msa0566040:CDS |
| TTTGGATCACAATAATTCGT+TGG | 0.499421 | 4_1:+67010919 | Msa0566040:CDS |
| AGAGTTAGATCCAACTATCC+TGG | 0.499558 | 4_1:+67011180 | Msa0566040:CDS |
| TTTACAGCTGGATCTTTGCT+CGG | 0.500828 | 4_1:+67007248 | Msa0566040:intron |
| TCTGAAGAACTGAGGCTACA+TGG | 0.501066 | 4_1:+67011301 | Msa0566040:CDS |
| TTATTACAGCCAAACCAATC+AGG | 0.503592 | 4_1:-67007411 | None:intergenic |
| CATACTTGAGCTTTGCCACT+GGG | 0.503896 | 4_1:-67007488 | None:intergenic |
| CCTCAACTCCATTTGCTCTG+TGG | 0.504272 | 4_1:+67007295 | Msa0566040:CDS |
| TATGTAGAAGAAATGGAAGA+AGG | 0.504737 | 4_1:+67004343 | Msa0566040:five_prime_UTR |
| TTCTACGAAAACCTTCTCTC+AGG | 0.505273 | 4_1:-67010601 | None:intergenic |
| TACCTCTTTGTAATAATGCC+AGG | 0.505783 | 4_1:-67011198 | None:intergenic |
| CTCCATCTTGTATGGTCTAA+CGG | 0.506541 | 4_1:+67010066 | Msa0566040:CDS |
| TTTATTACAAGATAAAGGCT+TGG | 0.509397 | 4_1:+67011120 | Msa0566040:CDS |
| TGTCATGTAGACTGGAATAT+GGG | 0.509938 | 4_1:+67010260 | Msa0566040:intron |
| TAAGAAGTTGAAAACCATAC+AGG | 0.510360 | 4_1:-67010289 | None:intergenic |
| AGTACTACTGCTACTACTGT+AGG | 0.514279 | 4_1:+67004076 | Msa0566040:five_prime_UTR |
| AGTCATTCCCTTGACTATCA+AGG | 0.518914 | 4_1:-67010961 | None:intergenic |
| TATCATTTGGGGATCCTGGT+TGG | 0.519872 | 4_1:+67007369 | Msa0566040:CDS |
| ATGTAGAAGAAATGGAAGAA+GGG | 0.520892 | 4_1:+67004344 | Msa0566040:five_prime_UTR |
| CAAGATAGAGAAGAACAAGA+TGG | 0.521581 | 4_1:-67010016 | None:intergenic |
| ACATACTTGAGCTTTGCCAC+TGG | 0.523034 | 4_1:-67007489 | None:intergenic |
| GCGAACTACAGTGCTTTGTA+AGG | 0.523719 | 4_1:-67010579 | None:intergenic |
| GGTTTGGCTGTAATAATGGC+TGG | 0.526477 | 4_1:+67007418 | Msa0566040:CDS |
| GAAACCCAAAACGGAGAAGA+GGG | 0.526546 | 4_1:-67004407 | None:intergenic |
| TTTATTCAATTATGCTGTGG+TGG | 0.526587 | 4_1:+67007461 | Msa0566040:CDS |
| AGTGACAAAAGCATTGATAG+TGG | 0.526999 | 4_1:+67010806 | Msa0566040:CDS |
| AAGAAAGGTTGAATGACCCT+AGG | 0.530561 | 4_1:+67011044 | Msa0566040:CDS |
| AGAAACCAGAAGGAGAATAT+CGG | 0.531577 | 4_1:-67009200 | None:intergenic |
| TTGCTACAATGCTGAAAAGA+AGG | 0.531920 | 4_1:+67011068 | Msa0566040:CDS |
| TTGGTTGTTTGTTCTAGTAG+TGG | 0.533333 | 4_1:+67010938 | Msa0566040:CDS |
| TTGTCACTATTGATTCCGTC+CGG | 0.535279 | 4_1:-67010791 | None:intergenic |
| CTGAAGAACTGAGGCTACAT+GGG | 0.538929 | 4_1:+67011302 | Msa0566040:CDS |
| ATATGTCACAACTGGGTCAC+GGG | 0.544303 | 4_1:+67009170 | Msa0566040:CDS |
| ATTATTACAAAGAGGTAGCC+TGG | 0.544816 | 4_1:+67011204 | Msa0566040:CDS |
| TCAGCATTGTAGCAATCCTA+GGG | 0.547219 | 4_1:-67011060 | None:intergenic |
| CAACAACAGACCACGCTGAA+AGG | 0.549091 | 4_1:-67007327 | None:intergenic |
| ATTATTGTGCTTATCATTTG+GGG | 0.550910 | 4_1:+67007358 | Msa0566040:CDS |
| AAATGGCCAAATATCTTGCA+AGG | 0.556111 | 4_1:+67007271 | Msa0566040:CDS |
| GAGCAACAGCTAGAAGAAGC+AGG | 0.558983 | 4_1:-67009119 | None:intergenic |
| TATTCTGATGGTATTGAGGT+GGG | 0.560584 | 4_1:+67009618 | Msa0566040:CDS |
| AAGATAGAGAAGAACAAGAT+GGG | 0.561082 | 4_1:-67010015 | None:intergenic |
| CGGAGCAGTAGTGTTGAAGC+TGG | 0.564054 | 4_1:+67010677 | Msa0566040:CDS |
| AGTGTAGCAACTGCTAATGC+CGG | 0.568091 | 4_1:+67005016 | Msa0566040:CDS |
| TTATTCTGATGGTATTGAGG+TGG | 0.569193 | 4_1:+67009617 | Msa0566040:CDS |
| ACTGTAGTTCGCCTGAGAGA+AGG | 0.569715 | 4_1:+67010590 | Msa0566040:CDS |
| GATGATCTCTATCTGCATCC+AGG | 0.572321 | 4_1:-67011222 | None:intergenic |
| TGCCGTTAGACCATACAAGA+TGG | 0.572744 | 4_1:-67010068 | None:intergenic |
| GGGCTGTTAATTGGAGACCC+TGG | 0.576443 | 4_1:+67004449 | Msa0566040:CDS |
| GAAAGAAGAGAAACCCAAAA+CGG | 0.579249 | 4_1:-67004416 | None:intergenic |
| AAATGTCATTGAAGCTAGCA+GGG | 0.579831 | 4_1:+67010709 | Msa0566040:CDS |
| TGTTCCAGCAATGAACAATA+CGG | 0.583900 | 4_1:-67010324 | None:intergenic |
| TGTAGAAGAAATGGAAGAAG+GGG | 0.585659 | 4_1:+67004345 | Msa0566040:five_prime_UTR |
| CTGAAAAGAAGGACCAGACA+AGG | 0.589398 | 4_1:+67011079 | Msa0566040:CDS |
| CTTGTATGGTCTAACGGCAA+AGG | 0.589814 | 4_1:+67010072 | Msa0566040:CDS |
| GTACTACTGCTACTACTGTA+GGG | 0.591140 | 4_1:+67004077 | Msa0566040:five_prime_UTR |
| CGGGTACTCCAGAACGAGCG+TGG | 0.591275 | 4_1:+67011370 | Msa0566040:three_prime_UTR |
| ACTGCTAATGCCGGTTGTCA+TGG | 0.591898 | 4_1:+67005025 | Msa0566040:CDS |
| ACAAAAGCATTGATAGTGGA+AGG | 0.594038 | 4_1:+67010810 | Msa0566040:CDS |
| GTTGTGGCTCAAGTATGAAA+CGG | 0.597296 | 4_1:+67010657 | Msa0566040:CDS |
| TATATGTCACAACTGGGTCA+CGG | 0.599544 | 4_1:+67009169 | Msa0566040:CDS |
| AGTAGTGGCCTTGATAGTCA+AGG | 0.600032 | 4_1:+67010953 | Msa0566040:CDS |
| TGGTATTGAGGTGGGTCCTG+TGG | 0.601112 | 4_1:+67009626 | Msa0566040:CDS |
| GTATGGTCTAACGGCAAAGG+AGG | 0.607174 | 4_1:+67010075 | Msa0566040:CDS |
| TTACAAATCCATTAGCTGCA+AGG | 0.612274 | 4_1:+67010549 | Msa0566040:CDS |
| CCACAGAGCAAATGGAGTTG+AGG | 0.613704 | 4_1:-67007295 | None:intergenic |
| ATGCGTAGTTCTACTACTTG+AGG | 0.614235 | 4_1:+67004312 | Msa0566040:five_prime_UTR |
| AGAGCCAAATTCAAATCCAA+TGG | 0.614750 | 4_1:-67011013 | None:intergenic |
| GTAATAAACTACTCAGCTCA+CGG | 0.620377 | 4_1:-67011105 | None:intergenic |
| GTAGTGGCCTTGATAGTCAA+GGG | 0.622589 | 4_1:+67010954 | Msa0566040:CDS |
| GCAAAGGAGGAAAATTGGCT+GGG | 0.623285 | 4_1:+67010088 | Msa0566040:CDS |
| GGTTCAGGCAAACAAGCCAC+AGG | 0.633093 | 4_1:-67009642 | None:intergenic |
| TGCAGGGAATGGCTTAGATG+TGG | 0.633163 | 4_1:+67009563 | Msa0566040:intron |
| TTTCATTATCTGAAGAACTG+AGG | 0.634133 | 4_1:+67011293 | Msa0566040:CDS |
| TAGTTCTACTACTTGAGGAG+AGG | 0.635850 | 4_1:+67004317 | Msa0566040:five_prime_UTR |
| AGTTCTACTACTTGAGGAGA+GGG | 0.640115 | 4_1:+67004318 | Msa0566040:five_prime_UTR |
| AATGGCCAAATATCTTGCAA+GGG | 0.651490 | 4_1:+67007272 | Msa0566040:CDS |
| ATCCTGGCATTATTACAAAG+AGG | 0.659701 | 4_1:+67011196 | Msa0566040:CDS |
| CGCAAGAAAGAAGAATCCCA+TGG | 0.660498 | 4_1:-67004372 | None:intergenic |
| ATCCAATATTACAACCAACC+AGG | 0.661339 | 4_1:-67007383 | None:intergenic |
| ACAAACCTTCTAGATTGTCG+AGG | 0.669453 | 4_1:-67009687 | None:intergenic |
| TGCTACAGGATACACAGTTG+TGG | 0.671189 | 4_1:+67004985 | Msa0566040:intron |
| GTAGAAGAAATGGAAGAAGG+GGG | 0.675311 | 4_1:+67004346 | Msa0566040:five_prime_UTR |
| ACCAGAAGGAGAATATCGGT+CGG | 0.676835 | 4_1:-67009196 | None:intergenic |
| GTGCAGTATATGTCACAACT+GGG | 0.677898 | 4_1:+67009163 | Msa0566040:CDS |
| GAATACCTATAAATTCGCCA+GGG | 0.678634 | 4_1:-67004466 | None:intergenic |
| GTTTCCTGAACCTTTCAGCG+TGG | 0.691977 | 4_1:+67007317 | Msa0566040:CDS |
| AATGTCATTGAAGCTAGCAG+GGG | 0.700722 | 4_1:+67010710 | Msa0566040:CDS |
| CAAACTGCTAGTTTGCCGGA+CGG | 0.701233 | 4_1:+67010776 | Msa0566040:CDS |
| ATGCATGTGAAGAAGAAATG+GGG | 0.701335 | 4_1:-67004277 | None:intergenic |
| GGGTACTCCAGAACGAGCGT+GGG | 0.705074 | 4_1:+67011371 | Msa0566040:three_prime_UTR |
| TGCTGTGGTGGAGAACCCAG+TGG | 0.782129 | 4_1:+67007473 | Msa0566040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTGATTAATTTTCAAT+AGG | + | chr4_1:67006781-67006800 | Msa0566040:intron | 10.0% |
| !! | TTAATTATCTTCCTTAATTT+CGG | - | chr4_1:67005487-67005506 | None:intergenic | 15.0% |
| !!! | TAGTTATTTAGTATTTTTAC+CGG | - | chr4_1:67006063-67006082 | None:intergenic | 15.0% |
| !! | ATATTCAATCATATCAAAAA+CGG | - | chr4_1:67006946-67006965 | None:intergenic | 15.0% |
| !!! | TCTTATAAAATGTATTGATT+TGG | + | chr4_1:67007117-67007136 | Msa0566040:intron | 15.0% |
| !!! | CTTATAAAATGTATTGATTT+GGG | + | chr4_1:67007118-67007137 | Msa0566040:intron | 15.0% |
| !!! | CTGTATTTTTTATGTTTATT+TGG | + | chr4_1:67007190-67007209 | Msa0566040:intron | 15.0% |
| !! | AAAACATATATATGTAAGAA+AGG | - | chr4_1:67007216-67007235 | None:intergenic | 15.0% |
| !! | TAAAAAAAGTTAAAAGAGAA+TGG | + | chr4_1:67008043-67008062 | Msa0566040:intron | 15.0% |
| !! | TCAAAGAAAATAAATTTATC+CGG | - | chr4_1:67008587-67008606 | None:intergenic | 15.0% |
| !! | TGATTATTAGGAAATAAATA+AGG | + | chr4_1:67008807-67008826 | Msa0566040:intron | 15.0% |
| !! | TTTAACCTTCAATAATAATT+TGG | - | chr4_1:67009330-67009349 | None:intergenic | 15.0% |
| !! | ATTATTGAAGGTTAAAATAT+AGG | + | chr4_1:67009334-67009353 | Msa0566040:intron | 15.0% |
| !! | TGAATTGAATTTGATATAGT+TGG | + | chr4_1:67003990-67004009 | Msa0566040:five_prime_UTR | 20.0% |
| !!! | AATTCATACTTGTTTTGAAA+TGG | + | chr4_1:67004562-67004581 | Msa0566040:intron | 20.0% |
| !!! | ATTCATACTTGTTTTGAAAT+GGG | + | chr4_1:67004563-67004582 | Msa0566040:intron | 20.0% |
| !! | AAAGTATAGTTGTTTAGATT+TGG | + | chr4_1:67004724-67004743 | Msa0566040:intron | 20.0% |
| !!! | TTATTGATAGCTTTGAAAAT+AGG | + | chr4_1:67004845-67004864 | Msa0566040:intron | 20.0% |
| !!! | TATTGATAGCTTTGAAAATA+GGG | + | chr4_1:67004846-67004865 | Msa0566040:intron | 20.0% |
| !! | ATTCAGTTAGTACAAAAAAT+TGG | - | chr4_1:67005362-67005381 | None:intergenic | 20.0% |
| !!! | ATTTTATTATTTATGGCTGT+TGG | + | chr4_1:67005427-67005446 | Msa0566040:intron | 20.0% |
| !! | AGAAATAATAACCGAAATTA+AGG | + | chr4_1:67005473-67005492 | Msa0566040:intron | 20.0% |
| !! | TAACAAATGTCATAAATTTG+AGG | + | chr4_1:67005504-67005523 | Msa0566040:intron | 20.0% |
| !! | AAATGTAACATCTATGTATT+TGG | + | chr4_1:67005634-67005653 | Msa0566040:intron | 20.0% |
| !! | AACTTCTTATATTTAGAAGT+GGG | - | chr4_1:67005843-67005862 | None:intergenic | 20.0% |
| !!! | TAGTACGTAATTCTTTTAAT+CGG | + | chr4_1:67006158-67006177 | Msa0566040:intron | 20.0% |
| !!! | AGCTATAAACTCTTTTTAAA+GGG | + | chr4_1:67006294-67006313 | Msa0566040:intron | 20.0% |
| !! | TTAATGCAATAGAGAAAAAA+GGG | - | chr4_1:67006475-67006494 | None:intergenic | 20.0% |
| !! | ATTAATGCAATAGAGAAAAA+AGG | - | chr4_1:67006476-67006495 | None:intergenic | 20.0% |
| !! | TTGATAAAAAATTTACCACA+TGG | - | chr4_1:67006625-67006644 | None:intergenic | 20.0% |
| !!! | TTGACATCTGTATTATTTTT+AGG | - | chr4_1:67006822-67006841 | None:intergenic | 20.0% |
| !! | AATTATTGTGCTTATCATTT+GGG | + | chr4_1:67007357-67007376 | Msa0566040:CDS | 20.0% |
| !! | TTCAAATCAAATACAGTATA+TGG | - | chr4_1:67007583-67007602 | None:intergenic | 20.0% |
| !! | AAAAAATTCCATTTAAGCTT+CGG | - | chr4_1:67007623-67007642 | None:intergenic | 20.0% |
| !!! | AATTGTTATCCCAATTTTTT+TGG | - | chr4_1:67007894-67007913 | None:intergenic | 20.0% |
| !! | GAACTTAATTAAGCATAAAT+AGG | + | chr4_1:67008545-67008564 | Msa0566040:intron | 20.0% |
| !!! | AATTTATTTTCTTTGAGAAG+TGG | + | chr4_1:67008591-67008610 | Msa0566040:intron | 20.0% |
| !!! | ATTTATTTTCTTTGAGAAGT+GGG | + | chr4_1:67008592-67008611 | Msa0566040:intron | 20.0% |
| !!! | AAATTGTCTTCATTTTTCTT+TGG | + | chr4_1:67009080-67009099 | Msa0566040:intron | 20.0% |
| !! | GTTATCCAAATTATTATTGA+AGG | + | chr4_1:67009322-67009341 | Msa0566040:intron | 20.0% |
| !! | AATATAACCAATATCAAGAA+GGG | - | chr4_1:67010159-67010178 | None:intergenic | 20.0% |
| !! | TAATATAACCAATATCAAGA+AGG | - | chr4_1:67010160-67010179 | None:intergenic | 20.0% |
| !!! | AATTTTTGTACTATCTCAAA+AGG | + | chr4_1:67010179-67010198 | Msa0566040:intron | 20.0% |
| !!! | ATTTTTGTACTATCTCAAAA+GGG | + | chr4_1:67010180-67010199 | Msa0566040:intron | 20.0% |
| !! | AGTAGTTTATTACAAGATAA+AGG | + | chr4_1:67011115-67011134 | Msa0566040:CDS | 20.0% |
| !! | TTTAACATCATAGCAAAATT+TGG | - | chr4_1:67011148-67011167 | None:intergenic | 20.0% |
| ! | CAGCAAATAATGAGAATTAA+AGG | - | chr4_1:67004505-67004524 | None:intergenic | 25.0% |
| !! | GAAAGAAGTGTAAATTGAAA+GGG | + | chr4_1:67004670-67004689 | Msa0566040:intron | 25.0% |
| !!! | TGATTTTTTAGTTCGATGTT+AGG | + | chr4_1:67004700-67004719 | Msa0566040:intron | 25.0% |
| !!! | ATTGATAGCTTTGAAAATAG+GGG | + | chr4_1:67004847-67004866 | Msa0566040:intron | 25.0% |
| ! | ATATCGCATCAAATACTTAA+AGG | - | chr4_1:67004921-67004940 | None:intergenic | 25.0% |
| !!! | ATTTTTGGTTGGTGTATTTT+AGG | + | chr4_1:67005089-67005108 | Msa0566040:intron | 25.0% |
| !!! | TATCCTGCTATATCATTTTT+TGG | + | chr4_1:67005252-67005271 | Msa0566040:intron | 25.0% |
| !!! | ATCCTGCTATATCATTTTTT+GGG | + | chr4_1:67005253-67005272 | Msa0566040:intron | 25.0% |
| ! | AGTTAGTACAAAAAATTGGT+AGG | - | chr4_1:67005358-67005377 | None:intergenic | 25.0% |
| !!! | AATTTCGGTTATTATTTCTG+TGG | - | chr4_1:67005472-67005491 | None:intergenic | 25.0% |
| ! | GTTAATTATTACATCCGAAA+TGG | + | chr4_1:67005563-67005582 | Msa0566040:intron | 25.0% |
| ! | TTGTGAATGTTATTCCATTT+CGG | - | chr4_1:67005580-67005599 | None:intergenic | 25.0% |
| ! | AGCAACAATTATTGTAGTAT+CGG | + | chr4_1:67005738-67005757 | Msa0566040:intron | 25.0% |
| ! | CAACTTCTTATATTTAGAAG+TGG | - | chr4_1:67005844-67005863 | None:intergenic | 25.0% |
| ! | TTTATGGATGTATAATGCTT+AGG | - | chr4_1:67005869-67005888 | None:intergenic | 25.0% |
| !!! | AGCTTCATAGGTTTTATAAA+GGG | - | chr4_1:67006024-67006043 | None:intergenic | 25.0% |
| !!! | TAGCTTCATAGGTTTTATAA+AGG | - | chr4_1:67006025-67006044 | None:intergenic | 25.0% |
| !! | CAGCTATAAACTCTTTTTAA+AGG | + | chr4_1:67006293-67006312 | Msa0566040:intron | 25.0% |
| !!! | ATAAACTCTTTTTAAAGGGT+TGG | + | chr4_1:67006298-67006317 | Msa0566040:intron | 25.0% |
| !!! | AGGTAGTAGAATTTTGATTT+AGG | - | chr4_1:67006434-67006453 | None:intergenic | 25.0% |
| !! | TCTACTACCTTTTTGATATT+TGG | + | chr4_1:67006444-67006463 | Msa0566040:intron | 25.0% |
| !! | TTAATCAGCTTTCTTTTAGA+GGG | - | chr4_1:67006670-67006689 | None:intergenic | 25.0% |
| !! | ATTAATCAGCTTTCTTTTAG+AGG | - | chr4_1:67006671-67006690 | None:intergenic | 25.0% |
| ! | AAAATTTCCCATTCATAACT+CGG | + | chr4_1:67006840-67006859 | Msa0566040:intron | 25.0% |
| ! | TCAAATCATGGAAATTTAAC+AGG | - | chr4_1:67006867-67006886 | None:intergenic | 25.0% |
| ! | ATAATTCAGATGTTATCACA+AGG | - | chr4_1:67006994-67007013 | None:intergenic | 25.0% |
| !! | ATTTTATAAGACAGAGTCAT+TGG | - | chr4_1:67007108-67007127 | None:intergenic | 25.0% |
| !!! | TAAAATGTATTGATTTGGGA+AGG | + | chr4_1:67007122-67007141 | Msa0566040:intron | 25.0% |
| ! | CAAATGATAAGCACAATAAT+TGG | - | chr4_1:67007358-67007377 | None:intergenic | 25.0% |
| ! | CAATTATTGTGCTTATCATT+TGG | + | chr4_1:67007356-67007375 | Msa0566040:CDS | 25.0% |
| ! | ATTATTGTGCTTATCATTTG+GGG | + | chr4_1:67007358-67007377 | Msa0566040:CDS | 25.0% |
| !! | CATTTTATTCAATTATGCTG+TGG | + | chr4_1:67007458-67007477 | Msa0566040:CDS | 25.0% |
| ! | AAAACAACCATCAATAGTAA+TGG | - | chr4_1:67007653-67007672 | None:intergenic | 25.0% |
| !!! | TGCATGTTTTTCAAAAGAAA+AGG | + | chr4_1:67007727-67007746 | Msa0566040:intron | 25.0% |
| !!! | GCATGTTTTTCAAAAGAAAA+GGG | + | chr4_1:67007728-67007747 | Msa0566040:intron | 25.0% |
| !!! | CATGTTTTTCAAAAGAAAAG+GGG | + | chr4_1:67007729-67007748 | Msa0566040:intron | 25.0% |
| !! | TGATTTTATGGTGACAAATT+TGG | + | chr4_1:67007769-67007788 | Msa0566040:intron | 25.0% |
| !!! | ATGTGGTTTTAGAGAAATTT+TGG | + | chr4_1:67007825-67007844 | Msa0566040:intron | 25.0% |
| ! | AATTGAGTCTACAATAACAT+AGG | + | chr4_1:67007910-67007929 | Msa0566040:intron | 25.0% |
| ! | TGGAGATTCTTTGAATAATA+TGG | + | chr4_1:67008063-67008082 | Msa0566040:intron | 25.0% |
| ! | GGAGATTCTTTGAATAATAT+GGG | + | chr4_1:67008064-67008083 | Msa0566040:intron | 25.0% |
| !! | TCTGATACTATCTTAGATTT+TGG | + | chr4_1:67008278-67008297 | Msa0566040:intron | 25.0% |
| !!! | TAGCTTTATAACCTCTATTT+AGG | + | chr4_1:67008347-67008366 | Msa0566040:intron | 25.0% |
| ! | ACTAATAAAAATTGCTCCTT+CGG | - | chr4_1:67009025-67009044 | None:intergenic | 25.0% |
| ! | TAAAATATAGGTAGCTATAG+AGG | + | chr4_1:67009346-67009365 | Msa0566040:intron | 25.0% |
| ! | AAGCATGATTGTATATGTAT+AGG | + | chr4_1:67009391-67009410 | Msa0566040:intron | 25.0% |
| ! | TAAATTGAAAACACTCATGT+TGG | + | chr4_1:67009417-67009436 | Msa0566040:intron | 25.0% |
| !! | ATGGAGACAAATAACTTTTA+AGG | + | chr4_1:67009742-67009761 | Msa0566040:intron | 25.0% |
| ! | ATCATCTGATGAAAGAAATT+TGG | + | chr4_1:67010901-67010920 | Msa0566040:CDS | 25.0% |
| ! | TTTATTACAAGATAAAGGCT+TGG | + | chr4_1:67011120-67011139 | Msa0566040:CDS | 25.0% |
| !! | CTAGTATTATCAGTATTTTC+AGG | - | chr4_1:67011247-67011266 | None:intergenic | 25.0% |
| ! | TCAGATAATGAAATCTGATT+AGG | - | chr4_1:67011286-67011305 | None:intergenic | 25.0% |
| ATGAGAGTGAGAAAAGAAAA+GGG | - | chr4_1:67004132-67004151 | None:intergenic | 30.0% | |
| AAATGGAAAAAAGAGAAGAG+AGG | - | chr4_1:67004166-67004185 | None:intergenic | 30.0% | |
| GTTAGGGTTAAAAATGGAAA+TGG | - | chr4_1:67004183-67004202 | None:intergenic | 30.0% | |
| AGTGAAGTTAGGGTTAAAAA+TGG | - | chr4_1:67004189-67004208 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGAAGAGTGAAAT+GGG | - | chr4_1:67004245-67004264 | None:intergenic | 30.0% |
| TATGCATGTGAAGAAGAAAT+GGG | - | chr4_1:67004281-67004300 | None:intergenic | 30.0% | |
| TTATGCATGTGAAGAAGAAA+TGG | - | chr4_1:67004282-67004301 | None:intergenic | 30.0% | |
| TATGTAGAAGAAATGGAAGA+AGG | + | chr4_1:67004343-67004362 | Msa0566040:five_prime_UTR | 30.0% | |
| ATGTAGAAGAAATGGAAGAA+GGG | + | chr4_1:67004344-67004363 | Msa0566040:five_prime_UTR | 30.0% | |
| !! | GGGTTTAATTTTACTTGCAT+TGG | + | chr4_1:67004583-67004602 | Msa0566040:intron | 30.0% |
| CAACTAGTTCAGTAATTACA+TGG | - | chr4_1:67004628-67004647 | None:intergenic | 30.0% | |
| CCTAAACAATATGTCGAAAA+GGG | - | chr4_1:67004651-67004670 | None:intergenic | 30.0% | |
| TCCTAAACAATATGTCGAAA+AGG | - | chr4_1:67004652-67004671 | None:intergenic | 30.0% | |
| ! | GGAAAGAAGTGTAAATTGAA+AGG | + | chr4_1:67004669-67004688 | Msa0566040:intron | 30.0% |
| AGTATTTGATGCGATATACT+CGG | + | chr4_1:67004924-67004943 | Msa0566040:intron | 30.0% | |
| TATAAAACTTCCAAGCATAG+AGG | + | chr4_1:67005228-67005247 | Msa0566040:intron | 30.0% | |
| GTACTAACTGAATAGCATTA+TGG | + | chr4_1:67005369-67005388 | Msa0566040:intron | 30.0% | |
| GTTGGTATCTTAATTACCAA+TGG | + | chr4_1:67005445-67005464 | Msa0566040:intron | 30.0% | |
| !! | TTATTATTTCTGTGGACCAT+TGG | - | chr4_1:67005464-67005483 | None:intergenic | 30.0% |
| ATTAACACAAATCGCATCTT+CGG | - | chr4_1:67005549-67005568 | None:intergenic | 30.0% | |
| GCAACAATTATTGTAGTATC+GGG | + | chr4_1:67005739-67005758 | Msa0566040:intron | 30.0% | |
| !! | ATTATTGTAGTATCGGGTTT+TGG | + | chr4_1:67005745-67005764 | Msa0566040:intron | 30.0% |
| !! | TTATTGTAGTATCGGGTTTT+GGG | + | chr4_1:67005746-67005765 | Msa0566040:intron | 30.0% |
| ATATTTAGAAGTGGGAAACA+AGG | - | chr4_1:67005835-67005854 | None:intergenic | 30.0% | |
| TTATACATCCATAAAGTCCA+AGG | + | chr4_1:67005874-67005893 | Msa0566040:intron | 30.0% | |
| !!! | GGTTTTATAAAGGGTGTTTA+TGG | - | chr4_1:67006015-67006034 | None:intergenic | 30.0% |
| ! | TCTTTTCTTCATAGCTTCAT+AGG | - | chr4_1:67006036-67006055 | None:intergenic | 30.0% |
| TTCATGTCACATTGTAAATC+AGG | + | chr4_1:67006253-67006272 | Msa0566040:intron | 30.0% | |
| ATACATATAGAAACCCCAAT+AGG | - | chr4_1:67006390-67006409 | None:intergenic | 30.0% | |
| GGTAACACCAAATATCAAAA+AGG | - | chr4_1:67006454-67006473 | None:intergenic | 30.0% | |
| AAATTTCCCATTCATAACTC+GGG | + | chr4_1:67006841-67006860 | Msa0566040:intron | 30.0% | |
| AAACAAAGAAGGTCAAATCA+TGG | - | chr4_1:67006879-67006898 | None:intergenic | 30.0% | |
| TCTATAGCTGTTCCAAAAAT+TGG | + | chr4_1:67006909-67006928 | Msa0566040:intron | 30.0% | |
| ! | GAGCTTCATTATCCAATTTT+TGG | - | chr4_1:67006924-67006943 | None:intergenic | 30.0% |
| ATTTGTTTACGTCTTACGAA+AGG | - | chr4_1:67007066-67007085 | None:intergenic | 30.0% | |
| TTTCGTAAGACGTAAACAAA+TGG | + | chr4_1:67007065-67007084 | Msa0566040:intron | 30.0% | |
| TTCGTAAGACGTAAACAAAT+GGG | + | chr4_1:67007066-67007085 | Msa0566040:intron | 30.0% | |
| TATTTGTGTCTATTTACAGC+TGG | + | chr4_1:67007236-67007255 | Msa0566040:intron | 30.0% | |
| TTTATTCAATTATGCTGTGG+TGG | + | chr4_1:67007461-67007480 | Msa0566040:CDS | 30.0% | |
| TCTAAATACCGAAGCTTAAA+TGG | + | chr4_1:67007612-67007631 | Msa0566040:intron | 30.0% | |
| ! | TTTTCTGCCATTACTATTGA+TGG | + | chr4_1:67007643-67007662 | Msa0566040:intron | 30.0% |
| !! | ACTATTGATGGTTGTTTTCT+TGG | + | chr4_1:67007655-67007674 | Msa0566040:intron | 30.0% |
| CATGATCCATGTTAGAAATA+AGG | + | chr4_1:67007792-67007811 | Msa0566040:intron | 30.0% | |
| !! | TTGACTCCTTATTTCTAACA+TGG | - | chr4_1:67007801-67007820 | None:intergenic | 30.0% |
| !! | ATTTTGGTCATAAAAGTTGC+TGG | + | chr4_1:67007841-67007860 | Msa0566040:intron | 30.0% |
| TGTAGTAAAGTTCTCAACTA+TGG | - | chr4_1:67007954-67007973 | None:intergenic | 30.0% | |
| CATCCTCTGTAAAATTATCA+CGG | - | chr4_1:67007984-67008003 | None:intergenic | 30.0% | |
| ! | CATTTTGTGAAGTTGAGTTA+AGG | - | chr4_1:67008305-67008324 | None:intergenic | 30.0% |
| ACTTCACAAAATGTCTACTA+AGG | + | chr4_1:67008312-67008331 | Msa0566040:intron | 30.0% | |
| TGCATGTCTCTATTATCTTT+AGG | + | chr4_1:67008448-67008467 | Msa0566040:intron | 30.0% | |
| TGTTCTTAAGACTACAAATG+AGG | - | chr4_1:67008479-67008498 | None:intergenic | 30.0% | |
| ! | TTCGAATCAAGTTTTCTCAA+GGG | - | chr4_1:67008777-67008796 | None:intergenic | 30.0% |
| !!! | TACAGGGTTTTTATTGGTTT+AGG | + | chr4_1:67008874-67008893 | Msa0566040:intron | 30.0% |
| !!! | TTTTTATTGGTTTAGGTCCT+TGG | + | chr4_1:67008881-67008900 | Msa0566040:intron | 30.0% |
| ! | CATGCTATTTATTTGCAGAA+TGG | + | chr4_1:67009257-67009276 | Msa0566040:CDS | 30.0% |
| ATTTGCAGAATGGTATTCAA+TGG | + | chr4_1:67009267-67009286 | Msa0566040:CDS | 30.0% | |
| TGTATAGAGACTGAAATAGA+TGG | + | chr4_1:67009467-67009486 | Msa0566040:intron | 30.0% | |
| TACAAATCTGCTTATTCTGA+TGG | + | chr4_1:67009606-67009625 | Msa0566040:CDS | 30.0% | |
| ! | TATAATTCATTTGGGTTTGG+TGG | - | chr4_1:67009666-67009685 | None:intergenic | 30.0% |
| ! | GGATATAATTCATTTGGGTT+TGG | - | chr4_1:67009669-67009688 | None:intergenic | 30.0% |
| GTCGAGGATATAATTCATTT+GGG | - | chr4_1:67009674-67009693 | None:intergenic | 30.0% | |
| TGTCGAGGATATAATTCATT+TGG | - | chr4_1:67009675-67009694 | None:intergenic | 30.0% | |
| TTCAGTATTAGCAATTAGTC+AGG | + | chr4_1:67009778-67009797 | Msa0566040:intron | 30.0% | |
| AGATCCATCAATAAACTGAT+TGG | - | chr4_1:67009841-67009860 | None:intergenic | 30.0% | |
| TTGCTTCTCAAACATTTAAG+CGG | + | chr4_1:67009926-67009945 | Msa0566040:intron | 30.0% | |
| !! | TTGCTTTTCTTTTTCTTGAC+AGG | + | chr4_1:67009988-67010007 | Msa0566040:intron | 30.0% |
| ! | TGCTTTTCTTTTTCTTGACA+GGG | + | chr4_1:67009989-67010008 | Msa0566040:intron | 30.0% |
| AAGATAGAGAAGAACAAGAT+GGG | - | chr4_1:67010018-67010037 | None:intergenic | 30.0% | |
| TTAGTATACTCCATCTTGTA+TGG | + | chr4_1:67010058-67010077 | Msa0566040:CDS | 30.0% | |
| ! | TCTGTTGCTGTTATTATTCT+TGG | + | chr4_1:67010121-67010140 | Msa0566040:CDS | 30.0% |
| !! | TCTTATGCACTTTTTATCTC+TGG | + | chr4_1:67010208-67010227 | Msa0566040:intron | 30.0% |
| TAAGAAGTTGAAAACCATAC+AGG | - | chr4_1:67010292-67010311 | None:intergenic | 30.0% | |
| !!! | AAAGGTCAAGTTTTGGATTA+AGG | - | chr4_1:67010395-67010414 | None:intergenic | 30.0% |
| ATGGATTTGTAACCGATAAA+TGG | - | chr4_1:67010541-67010560 | None:intergenic | 30.0% | |
| TTTGGATCACAATAATTCGT+TGG | + | chr4_1:67010919-67010938 | Msa0566040:CDS | 30.0% | |
| ACAACCATTGGATTTGAATT+TGG | + | chr4_1:67011009-67011028 | Msa0566040:CDS | 30.0% | |
| TTTCATTATCTGAAGAACTG+AGG | + | chr4_1:67011293-67011312 | Msa0566040:CDS | 30.0% | |
| GATGAGAGTGAGAAAAGAAA+AGG | - | chr4_1:67004133-67004152 | None:intergenic | 35.0% | |
| ! | AAGTTTGAAGCTTGAAGCTA+GGG | - | chr4_1:67004218-67004237 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGAAGAGTGAAA+TGG | - | chr4_1:67004246-67004265 | None:intergenic | 35.0% |
| ATGCATGTGAAGAAGAAATG+GGG | - | chr4_1:67004280-67004299 | None:intergenic | 35.0% | |
| TGTAGAAGAAATGGAAGAAG+GGG | + | chr4_1:67004345-67004364 | Msa0566040:five_prime_UTR | 35.0% | |
| GAAAGAAGAGAAACCCAAAA+CGG | - | chr4_1:67004419-67004438 | None:intergenic | 35.0% | |
| TCTCTTCTTTCTCCATTCTT+TGG | + | chr4_1:67004428-67004447 | Msa0566040:CDS | 35.0% | |
| CTCTTCTTTCTCCATTCTTT+GGG | + | chr4_1:67004429-67004448 | Msa0566040:CDS | 35.0% | |
| GAATACCTATAAATTCGCCA+GGG | - | chr4_1:67004469-67004488 | None:intergenic | 35.0% | |
| TGAATACCTATAAATTCGCC+AGG | - | chr4_1:67004470-67004489 | None:intergenic | 35.0% | |
| ! | CCCTTTTCGACATATTGTTT+AGG | + | chr4_1:67004648-67004667 | Msa0566040:intron | 35.0% |
| ! | TTTTCGAACTTTGTGTGTCA+TGG | + | chr4_1:67004752-67004771 | Msa0566040:intron | 35.0% |
| TTTCGAACTTTGTGTGTCAT+GGG | + | chr4_1:67004753-67004772 | Msa0566040:intron | 35.0% | |
| ! | AGCTTGATGATTTGTAATCC+TGG | + | chr4_1:67004795-67004814 | Msa0566040:intron | 35.0% |
| ! | GCTTGATGATTTGTAATCCT+GGG | + | chr4_1:67004796-67004815 | Msa0566040:intron | 35.0% |
| ! | CTTGATGATTTGTAATCCTG+GGG | + | chr4_1:67004797-67004816 | Msa0566040:intron | 35.0% |
| GTACATGAAGATATGCACAA+TGG | + | chr4_1:67004822-67004841 | Msa0566040:intron | 35.0% | |
| GGGTATCACTATTCACTAAT+GGG | + | chr4_1:67004867-67004886 | Msa0566040:intron | 35.0% | |
| GCATCAAATACTTAAAGGTG+AGG | - | chr4_1:67004916-67004935 | None:intergenic | 35.0% | |
| TCAGAATGTGAGAAAACGTT+GGG | + | chr4_1:67005065-67005084 | Msa0566040:intron | 35.0% | |
| ! | AAAGAAGAGAAGTTTAGCTC+TGG | - | chr4_1:67005135-67005154 | None:intergenic | 35.0% |
| ! | TTTTCAACCTCCTCATTTGT+CGG | + | chr4_1:67005180-67005199 | Msa0566040:intron | 35.0% |
| GACCCAAAAAATGATATAGC+AGG | - | chr4_1:67005258-67005277 | None:intergenic | 35.0% | |
| CAGTGTTATCAATCATGAAC+AGG | - | chr4_1:67005290-67005309 | None:intergenic | 35.0% | |
| ! | CTGTTCATGATTGATAACAC+TGG | + | chr4_1:67005288-67005307 | Msa0566040:intron | 35.0% |
| ! | ACATTCACAATTTGCTTCTG+TGG | + | chr4_1:67005590-67005609 | Msa0566040:intron | 35.0% |
| GTAACATCTATGTATTTGGC+TGG | + | chr4_1:67005638-67005657 | Msa0566040:intron | 35.0% | |
| ! | CTGAAATTTAGAGCAAGCAA+TGG | - | chr4_1:67005720-67005739 | None:intergenic | 35.0% |
| GAGTTGGAGTTATTAAGAGA+AGG | - | chr4_1:67005942-67005961 | None:intergenic | 35.0% | |
| AAGGAACAACTATTGAGAGT+TGG | - | chr4_1:67005958-67005977 | None:intergenic | 35.0% | |
| TTATGGACCAAACATGCTAT+GGG | - | chr4_1:67005998-67006017 | None:intergenic | 35.0% | |
| TTTATGGACCAAACATGCTA+TGG | - | chr4_1:67005999-67006018 | None:intergenic | 35.0% | |
| GCTATGAAGAAAAGACTATC+CGG | + | chr4_1:67006041-67006060 | Msa0566040:intron | 35.0% | |
| ATGTGACATGAATCACTTGA+TGG | - | chr4_1:67006245-67006264 | None:intergenic | 35.0% | |
| ATACGATTTACTCTGCCTAT+TGG | + | chr4_1:67006372-67006391 | Msa0566040:intron | 35.0% | |
| TACGATTTACTCTGCCTATT+GGG | + | chr4_1:67006373-67006392 | Msa0566040:intron | 35.0% | |
| GAATGATATGAACAGCAAGA+TGG | - | chr4_1:67006533-67006552 | None:intergenic | 35.0% | |
| CTGAATGCTTATCAAGTCAA+AGG | - | chr4_1:67006575-67006594 | None:intergenic | 35.0% | |
| !!! | CCATTTTGCTGTAGTTTGTT+CGG | + | chr4_1:67006728-67006747 | Msa0566040:intron | 35.0% |
| ! | TTTGACCTTCTTTGTTTGAC+AGG | + | chr4_1:67006882-67006901 | Msa0566040:intron | 35.0% |
| AGATTCCTGTCAAACAAAGA+AGG | - | chr4_1:67006890-67006909 | None:intergenic | 35.0% | |
| TAAAGCAACACACAACAACT+GGG | - | chr4_1:67007151-67007170 | None:intergenic | 35.0% | |
| TTAAAGCAACACACAACAAC+TGG | - | chr4_1:67007152-67007171 | None:intergenic | 35.0% | |
| AAATGGCCAAATATCTTGCA+AGG | + | chr4_1:67007271-67007290 | Msa0566040:CDS | 35.0% | |
| AATGGCCAAATATCTTGCAA+GGG | + | chr4_1:67007272-67007291 | Msa0566040:CDS | 35.0% | |
| ! | ATCCTGGTTGGTTGTAATAT+TGG | + | chr4_1:67007381-67007400 | Msa0566040:CDS | 35.0% |
| ATCCAATATTACAACCAACC+AGG | - | chr4_1:67007386-67007405 | None:intergenic | 35.0% | |
| TTATTACAGCCAAACCAATC+AGG | - | chr4_1:67007414-67007433 | None:intergenic | 35.0% | |
| !! | GATTGGTTTGGCTGTAATAA+TGG | + | chr4_1:67007414-67007433 | Msa0566040:CDS | 35.0% |
| GCTTCGGTATTTAGAAATGT+TGG | - | chr4_1:67007607-67007626 | None:intergenic | 35.0% | |
| AAGGCTGTGTATTGCTAAAA+TGG | - | chr4_1:67007692-67007711 | None:intergenic | 35.0% | |
| ! | TTTTAGCAATACACAGCCTT+TGG | + | chr4_1:67007692-67007711 | Msa0566040:intron | 35.0% |
| ! | TGCAGCTGCATATGATTTTA+TGG | + | chr4_1:67007757-67007776 | Msa0566040:intron | 35.0% |
| AATAAGGAGTCAATACGATG+TGG | + | chr4_1:67007808-67007827 | Msa0566040:intron | 35.0% | |
| TGTGGAGTTGCCAAAAAAAT+TGG | + | chr4_1:67007881-67007900 | Msa0566040:intron | 35.0% | |
| GTGGAGTTGCCAAAAAAATT+GGG | + | chr4_1:67007882-67007901 | Msa0566040:intron | 35.0% | |
| ! | CGTGATAATTTTACAGAGGA+TGG | + | chr4_1:67007982-67008001 | Msa0566040:intron | 35.0% |
| GCTATTTAAGCCATATCTCT+TGG | + | chr4_1:67008142-67008161 | Msa0566040:intron | 35.0% | |
| CTAAGTGTGAAGAAATGCAT+CGG | - | chr4_1:67008191-67008210 | None:intergenic | 35.0% | |
| ACAAAATGTCTACTAAGGTG+AGG | + | chr4_1:67008317-67008336 | Msa0566040:intron | 35.0% | |
| TAGAGATATGGCCTAAATAG+AGG | - | chr4_1:67008361-67008380 | None:intergenic | 35.0% | |
| TCTATTTAGGCCATATCTCT+AGG | + | chr4_1:67008360-67008379 | Msa0566040:intron | 35.0% | |
| CTATTTAGGCCATATCTCTA+GGG | + | chr4_1:67008361-67008380 | Msa0566040:intron | 35.0% | |
| CATGTCTGCTCAACAATTAT+TGG | - | chr4_1:67008417-67008436 | None:intergenic | 35.0% | |
| ! | TAGTCTTAAGAACAGATGTG+AGG | + | chr4_1:67008485-67008504 | Msa0566040:intron | 35.0% |
| !! | AGGAAGAAAGTATCACTAAC+CGG | + | chr4_1:67008565-67008584 | Msa0566040:intron | 35.0% |
| !! | ATTTTCTTTGAGAAGTGGGA+AGG | + | chr4_1:67008596-67008615 | Msa0566040:intron | 35.0% |
| ! | TCATTTGGTAGGTTTAGAGT+AGG | + | chr4_1:67008625-67008644 | Msa0566040:intron | 35.0% |
| ! | CTTCGAATCAAGTTTTCTCA+AGG | - | chr4_1:67008778-67008797 | None:intergenic | 35.0% |
| AAGAGAGCAGCATGATTATT+AGG | + | chr4_1:67008795-67008814 | Msa0566040:intron | 35.0% | |
| AATAAGGAGTCACAGTGATA+TGG | + | chr4_1:67008823-67008842 | Msa0566040:intron | 35.0% | |
| CTATAGTTGAACAAGCTACA+GGG | + | chr4_1:67008858-67008877 | Msa0566040:intron | 35.0% | |
| ! | ACAAGCTACAGGGTTTTTAT+TGG | + | chr4_1:67008868-67008887 | Msa0566040:intron | 35.0% |
| ATGTTGCTCTTTAATTGCGT+TGG | + | chr4_1:67008966-67008985 | Msa0566040:intron | 35.0% | |
| ! | GTTTTGTGTTTACTTATCCG+AGG | + | chr4_1:67008988-67009007 | Msa0566040:intron | 35.0% |
| !! | TGTCTTCATTTTTCTTTGGC+AGG | + | chr4_1:67009084-67009103 | Msa0566040:intron | 35.0% |
| ATATACTGCACAAAGCTCAT+AGG | - | chr4_1:67009154-67009173 | None:intergenic | 35.0% | |
| AGAAACCAGAAGGAGAATAT+CGG | - | chr4_1:67009203-67009222 | None:intergenic | 35.0% | |
| !!! | TCTCCTTCTGGTTTCTTTTT+TGG | + | chr4_1:67009207-67009226 | Msa0566040:CDS | 35.0% |
| ACTCCAAAAAAGAAACCAGA+AGG | - | chr4_1:67009213-67009232 | None:intergenic | 35.0% | |
| TTATTACCATTGCTCATGCA+GGG | + | chr4_1:67009547-67009566 | Msa0566040:intron | 35.0% | |
| TGCTTATTCTGATGGTATTG+AGG | + | chr4_1:67009614-67009633 | Msa0566040:CDS | 35.0% | |
| ! | TTATTCTGATGGTATTGAGG+TGG | + | chr4_1:67009617-67009636 | Msa0566040:CDS | 35.0% |
| ! | TATTCTGATGGTATTGAGGT+GGG | + | chr4_1:67009618-67009637 | Msa0566040:CDS | 35.0% |
| TATATCCTCGACAATCTAGA+AGG | + | chr4_1:67009682-67009701 | Msa0566040:CDS | 35.0% | |
| CTCAGTTTGGACTATCATAA+TGG | + | chr4_1:67009723-67009742 | Msa0566040:intron | 35.0% | |
| AATAAACTGATTGGAAGGAG+GGG | - | chr4_1:67009832-67009851 | None:intergenic | 35.0% | |
| CAATAAACTGATTGGAAGGA+GGG | - | chr4_1:67009833-67009852 | None:intergenic | 35.0% | |
| TCAATAAACTGATTGGAAGG+AGG | - | chr4_1:67009834-67009853 | None:intergenic | 35.0% | |
| CCATCAATAAACTGATTGGA+AGG | - | chr4_1:67009837-67009856 | None:intergenic | 35.0% | |
| CCTTCCAATCAGTTTATTGA+TGG | + | chr4_1:67009834-67009853 | Msa0566040:intron | 35.0% | |
| GGCACAAGTTATTCAAAACA+AGG | - | chr4_1:67009868-67009887 | None:intergenic | 35.0% | |
| TCAACCATTGTCAGAAGAAT+AGG | - | chr4_1:67009889-67009908 | None:intergenic | 35.0% | |
| CAAGATAGAGAAGAACAAGA+TGG | - | chr4_1:67010019-67010038 | None:intergenic | 35.0% | |
| CATCTTGTTCTTCTCTATCT+TGG | + | chr4_1:67010017-67010036 | Msa0566040:CDS | 35.0% | |
| TAATCAGCCCTTCTTGATAT+TGG | + | chr4_1:67010149-67010168 | Msa0566040:intron | 35.0% | |
| AAACTTCTTGTCATGTAGAC+TGG | + | chr4_1:67010252-67010271 | Msa0566040:intron | 35.0% | |
| TTGTCATGTAGACTGGAATA+TGG | + | chr4_1:67010259-67010278 | Msa0566040:intron | 35.0% | |
| TGTCATGTAGACTGGAATAT+GGG | + | chr4_1:67010260-67010279 | Msa0566040:intron | 35.0% | |
| TGTTCCAGCAATGAACAATA+CGG | - | chr4_1:67010327-67010346 | None:intergenic | 35.0% | |
| !! | CGGGTGTTTCTTATTTGTTT+TGG | + | chr4_1:67010350-67010369 | Msa0566040:CDS | 35.0% |
| !!! | TTTGTTTTGGAGTGCAATAC+TGG | + | chr4_1:67010363-67010382 | Msa0566040:CDS | 35.0% |
| ! | CAGGTAAAAAGGTCAAGTTT+TGG | - | chr4_1:67010402-67010421 | None:intergenic | 35.0% |
| TACATGCAATGCAGGTAAAA+AGG | - | chr4_1:67010413-67010432 | None:intergenic | 35.0% | |
| ACCTGCATTGCATGTATTAA+TGG | + | chr4_1:67010417-67010436 | Msa0566040:intron | 35.0% | |
| ACCATTAATACATGCAATGC+AGG | - | chr4_1:67010421-67010440 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTTGCAGGTATTT+GGG | + | chr4_1:67010458-67010477 | Msa0566040:intron | 35.0% |
| ! | TTTTCTCTTGCAGGTATTTG+GGG | + | chr4_1:67010459-67010478 | Msa0566040:intron | 35.0% |
| CTGTATCAGTTATGCTGTTA+TGG | + | chr4_1:67010484-67010503 | Msa0566040:CDS | 35.0% | |
| !! | GTTATGGCTTGTGTACTTTT+AGG | + | chr4_1:67010500-67010519 | Msa0566040:CDS | 35.0% |
| TTACAAATCCATTAGCTGCA+AGG | + | chr4_1:67010549-67010568 | Msa0566040:CDS | 35.0% | |
| !!! | AGTTCATCTAGCTTTTCTGA+AGG | + | chr4_1:67010635-67010654 | Msa0566040:CDS | 35.0% |
| AAATGTCATTGAAGCTAGCA+GGG | + | chr4_1:67010709-67010728 | Msa0566040:CDS | 35.0% | |
| !! | AGTGACAAAAGCATTGATAG+TGG | + | chr4_1:67010806-67010825 | Msa0566040:CDS | 35.0% |
| !! | ACAAAAGCATTGATAGTGGA+AGG | + | chr4_1:67010810-67010829 | Msa0566040:CDS | 35.0% |
| TCAGATGATATTCCAACTTC+AGG | - | chr4_1:67010890-67010909 | None:intergenic | 35.0% | |
| TTGGTTGTTTGTTCTAGTAG+TGG | + | chr4_1:67010938-67010957 | Msa0566040:CDS | 35.0% | |
| AGAGCCAAATTCAAATCCAA+TGG | - | chr4_1:67011016-67011035 | None:intergenic | 35.0% | |
| TTGCTACAATGCTGAAAAGA+AGG | + | chr4_1:67011068-67011087 | Msa0566040:CDS | 35.0% | |
| GTAATAAACTACTCAGCTCA+CGG | - | chr4_1:67011108-67011127 | None:intergenic | 35.0% | |
| TGTAATAATGCCAGGATAGT+TGG | - | chr4_1:67011193-67011212 | None:intergenic | 35.0% | |
| ATCCTGGCATTATTACAAAG+AGG | + | chr4_1:67011196-67011215 | Msa0566040:CDS | 35.0% | |
| TACCTCTTTGTAATAATGCC+AGG | - | chr4_1:67011201-67011220 | None:intergenic | 35.0% | |
| ATTATTACAAAGAGGTAGCC+TGG | + | chr4_1:67011204-67011223 | Msa0566040:CDS | 35.0% | |
| GGCTTATTTGCATCACTTAA+CGG | + | chr4_1:67011350-67011369 | Msa0566040:CDS | 35.0% | |
| GCTTATTTGCATCACTTAAC+GGG | + | chr4_1:67011351-67011370 | Msa0566040:exon | 35.0% | |
| AGATGAGCATAGTGTGTAAG+AGG | + | chr4_1:67004027-67004046 | Msa0566040:five_prime_UTR | 40.0% | |
| AGTACTACTGCTACTACTGT+AGG | + | chr4_1:67004076-67004095 | Msa0566040:five_prime_UTR | 40.0% | |
| GTACTACTGCTACTACTGTA+GGG | + | chr4_1:67004077-67004096 | Msa0566040:five_prime_UTR | 40.0% | |
| AGGGTTTGAGAGTGAAGTTA+GGG | - | chr4_1:67004199-67004218 | None:intergenic | 40.0% | |
| TAGGGTTTGAGAGTGAAGTT+AGG | - | chr4_1:67004200-67004219 | None:intergenic | 40.0% | |
| ! | GAAGTTTGAAGCTTGAAGCT+AGG | - | chr4_1:67004219-67004238 | None:intergenic | 40.0% |
| ! | ATGCGTAGTTCTACTACTTG+AGG | + | chr4_1:67004312-67004331 | Msa0566040:five_prime_UTR | 40.0% |
| ! | TAGTTCTACTACTTGAGGAG+AGG | + | chr4_1:67004317-67004336 | Msa0566040:five_prime_UTR | 40.0% |
| AGTTCTACTACTTGAGGAGA+GGG | + | chr4_1:67004318-67004337 | Msa0566040:five_prime_UTR | 40.0% | |
| ! | GAGGGTGTATGTAGAAGAAA+TGG | + | chr4_1:67004336-67004355 | Msa0566040:five_prime_UTR | 40.0% |
| GTAGAAGAAATGGAAGAAGG+GGG | + | chr4_1:67004346-67004365 | Msa0566040:five_prime_UTR | 40.0% | |
| TTCTTTCTTGCGCGATTTGT+GGG | + | chr4_1:67004383-67004402 | Msa0566040:CDS | 40.0% | |
| CCAATTAACAGCCCAAAGAA+TGG | - | chr4_1:67004443-67004462 | None:intergenic | 40.0% | |
| CCATTCTTTGGGCTGTTAAT+TGG | + | chr4_1:67004440-67004459 | Msa0566040:CDS | 40.0% | |
| ATATCTTCATGTACAACCCC+AGG | - | chr4_1:67004816-67004835 | None:intergenic | 40.0% | |
| ! | GGGGTATCACTATTCACTAA+TGG | + | chr4_1:67004866-67004885 | Msa0566040:intron | 40.0% |
| !!! | TTTTCTCACATTCTGAGGTG+TGG | - | chr4_1:67005061-67005080 | None:intergenic | 40.0% |
| ! | CAACGTTTTCTCACATTCTG+AGG | - | chr4_1:67005066-67005085 | None:intergenic | 40.0% |
| CTCAGAATGTGAGAAAACGT+TGG | + | chr4_1:67005064-67005083 | Msa0566040:intron | 40.0% | |
| CAGAATGTGAGAAAACGTTG+GGG | + | chr4_1:67005066-67005085 | Msa0566040:intron | 40.0% | |
| ! | GAGAAAACGTTGGGGATTTT+TGG | + | chr4_1:67005074-67005093 | Msa0566040:intron | 40.0% |
| !!! | AAACGTTGGGGATTTTTGGT+TGG | + | chr4_1:67005078-67005097 | Msa0566040:intron | 40.0% |
| ATGAAAGCAGGTGTGAAACA+GGG | - | chr4_1:67005160-67005179 | None:intergenic | 40.0% | |
| AATGAAAGCAGGTGTGAAAC+AGG | - | chr4_1:67005161-67005180 | None:intergenic | 40.0% | |
| GGAGGTTGAAAAATGAAAGC+AGG | - | chr4_1:67005172-67005191 | None:intergenic | 40.0% | |
| ! | TTAGAGCATTTACGACCAAG+TGG | + | chr4_1:67005796-67005815 | Msa0566040:intron | 40.0% |
| CTTAAGAGCCTTGGACTTTA+TGG | - | chr4_1:67005885-67005904 | None:intergenic | 40.0% | |
| !! | GGGTTGCATTATTTTGTCGA+AGG | - | chr4_1:67005977-67005996 | None:intergenic | 40.0% |
| TATGGACCAAACATGCTATG+GGG | - | chr4_1:67005997-67006016 | None:intergenic | 40.0% | |
| AGGCAGAGTAAATCGTATGA+AGG | - | chr4_1:67006370-67006389 | None:intergenic | 40.0% | |
| ACGATTTACTCTGCCTATTG+GGG | + | chr4_1:67006374-67006393 | Msa0566040:intron | 40.0% | |
| GATAAGCATTCAGTCCTATG+TGG | + | chr4_1:67006582-67006601 | Msa0566040:intron | 40.0% | |
| CCGAACAAACTACAGCAAAA+TGG | - | chr4_1:67006731-67006750 | None:intergenic | 40.0% | |
| CATAACAAATGTCGTTAGCC+TGG | + | chr4_1:67007025-67007044 | Msa0566040:intron | 40.0% | |
| ! | AGGCAATAAAGTAGAGTACC+AGG | - | chr4_1:67007046-67007065 | None:intergenic | 40.0% |
| TTTACAGCTGGATCTTTGCT+CGG | + | chr4_1:67007248-67007267 | Msa0566040:intron | 40.0% | |
| ATATTGGATCGACACCTGAT+TGG | + | chr4_1:67007397-67007416 | Msa0566040:CDS | 40.0% | |
| GCTGTGTATTGCTAAAATGG+TGG | - | chr4_1:67007689-67007708 | None:intergenic | 40.0% | |
| ! | GTGCCGTGATAATTTTACAG+AGG | + | chr4_1:67007978-67007997 | Msa0566040:intron | 40.0% |
| TACAGAGGATGGTATCACTT+CGG | + | chr4_1:67007993-67008012 | Msa0566040:intron | 40.0% | |
| TTCTTCACACTTAGCTGCTT+AGG | + | chr4_1:67008197-67008216 | Msa0566040:intron | 40.0% | |
| TCTTCACACTTAGCTGCTTA+GGG | + | chr4_1:67008198-67008217 | Msa0566040:intron | 40.0% | |
| CTTATCCTAGAGCTGAAGTT+GGG | - | chr4_1:67008257-67008276 | None:intergenic | 40.0% | |
| !! | CCATATCTCTAGGGTTTCTA+GGG | + | chr4_1:67008370-67008389 | Msa0566040:intron | 40.0% |
| !! | CATATCTCTAGGGTTTCTAG+GGG | + | chr4_1:67008371-67008390 | Msa0566040:intron | 40.0% |
| GAAGGTCATACTCATTTGGT+AGG | + | chr4_1:67008614-67008633 | Msa0566040:intron | 40.0% | |
| ! | TTTGGTAGGTTTAGAGTAGG+AGG | + | chr4_1:67008628-67008647 | Msa0566040:intron | 40.0% |
| ! | TTGGTAGGTTTAGAGTAGGA+GGG | + | chr4_1:67008629-67008648 | Msa0566040:intron | 40.0% |
| !! | TAATAGTACATGCACTGGCT+TGG | - | chr4_1:67008697-67008716 | None:intergenic | 40.0% |
| !!! | CGGGTTTAGAATGCTGTTTT+GGG | + | chr4_1:67008718-67008737 | Msa0566040:intron | 40.0% |
| !! | CCTGTAGCTTGTTCAACTAT+AGG | - | chr4_1:67008860-67008879 | None:intergenic | 40.0% |
| CCTATAGTTGAACAAGCTAC+AGG | + | chr4_1:67008857-67008876 | Msa0566040:intron | 40.0% | |
| TGTGCAGTATATGTCACAAC+TGG | + | chr4_1:67009162-67009181 | Msa0566040:CDS | 40.0% | |
| GTGCAGTATATGTCACAACT+GGG | + | chr4_1:67009163-67009182 | Msa0566040:CDS | 40.0% | |
| TATATGTCACAACTGGGTCA+CGG | + | chr4_1:67009169-67009188 | Msa0566040:CDS | 40.0% | |
| CTTATTACCATTGCTCATGC+AGG | + | chr4_1:67009546-67009565 | Msa0566040:intron | 40.0% | |
| ACAAACCTTCTAGATTGTCG+AGG | - | chr4_1:67009690-67009709 | None:intergenic | 40.0% | |
| TCTTGTTCTTGCTCTCAGTT+TGG | + | chr4_1:67009710-67009729 | Msa0566040:intron | 40.0% | |
| TGTGCCTATTCTTCTGACAA+TGG | + | chr4_1:67009882-67009901 | Msa0566040:intron | 40.0% | |
| CTCCATCTTGTATGGTCTAA+CGG | + | chr4_1:67010066-67010085 | Msa0566040:CDS | 40.0% | |
| TAACGGCAAAGGAGGAAAAT+TGG | + | chr4_1:67010083-67010102 | Msa0566040:CDS | 40.0% | |
| TGTTCATTGCTGGAACATCT+CGG | + | chr4_1:67010330-67010349 | Msa0566040:CDS | 40.0% | |
| ! | TGACTATGCTTTTCTCTTGC+AGG | + | chr4_1:67010450-67010469 | Msa0566040:intron | 40.0% |
| ! | GCTTTTCTCTTGCAGGTATT+TGG | + | chr4_1:67010457-67010476 | Msa0566040:intron | 40.0% |
| !! | TGCTGTTTCTCGCCATTTAT+CGG | + | chr4_1:67010526-67010545 | Msa0566040:CDS | 40.0% |
| TTCTACGAAAACCTTCTCTC+AGG | - | chr4_1:67010604-67010623 | None:intergenic | 40.0% | |
| ! | GAGAGAAGGTTTTCGTAGAA+AGG | + | chr4_1:67010604-67010623 | Msa0566040:CDS | 40.0% |
| !!! | TCTAGCTTTTCTGAAGGTTG+TGG | + | chr4_1:67010641-67010660 | Msa0566040:CDS | 40.0% |
| GTTGTGGCTCAAGTATGAAA+CGG | + | chr4_1:67010657-67010676 | Msa0566040:CDS | 40.0% | |
| ! | AGTGTTGAAGCTGGTAATCT+TGG | + | chr4_1:67010686-67010705 | Msa0566040:CDS | 40.0% |
| GAAATGTCATTGAAGCTAGC+AGG | + | chr4_1:67010708-67010727 | Msa0566040:CDS | 40.0% | |
| AATGTCATTGAAGCTAGCAG+GGG | + | chr4_1:67010710-67010729 | Msa0566040:CDS | 40.0% | |
| !! | TTGTCACTATTGATTCCGTC+CGG | - | chr4_1:67010794-67010813 | None:intergenic | 40.0% |
| AGTCATTCCCTTGACTATCA+AGG | - | chr4_1:67010964-67010983 | None:intergenic | 40.0% | |
| CTCTGCAAATCAACAACCAT+TGG | + | chr4_1:67010997-67011016 | Msa0566040:CDS | 40.0% | |
| TGGCTCTTGCATTTCAAGAA+AGG | + | chr4_1:67011029-67011048 | Msa0566040:CDS | 40.0% | |
| AAGAAAGGTTGAATGACCCT+AGG | + | chr4_1:67011044-67011063 | Msa0566040:CDS | 40.0% | |
| TCAGCATTGTAGCAATCCTA+GGG | - | chr4_1:67011063-67011082 | None:intergenic | 40.0% | |
| TTCAGCATTGTAGCAATCCT+AGG | - | chr4_1:67011064-67011083 | None:intergenic | 40.0% | |
| AGAGTTAGATCCAACTATCC+TGG | + | chr4_1:67011180-67011199 | Msa0566040:CDS | 40.0% | |
| CGCAAGAAAGAAGAATCCCA+TGG | - | chr4_1:67004375-67004394 | None:intergenic | 45.0% | |
| CTTCTTTCTTGCGCGATTTG+TGG | + | chr4_1:67004382-67004401 | Msa0566040:CDS | 45.0% | |
| GAAACCCAAAACGGAGAAGA+GGG | - | chr4_1:67004410-67004429 | None:intergenic | 45.0% | |
| AGAAACCCAAAACGGAGAAG+AGG | - | chr4_1:67004411-67004430 | None:intergenic | 45.0% | |
| ACTAATGGGATAGATGCCAC+AGG | + | chr4_1:67004881-67004900 | Msa0566040:intron | 45.0% | |
| !! | TCAATAGCGTGTGGTGCTAT+AGG | + | chr4_1:67004952-67004971 | Msa0566040:intron | 45.0% |
| !! | CAATAGCGTGTGGTGCTATA+GGG | + | chr4_1:67004953-67004972 | Msa0566040:intron | 45.0% |
| !! | AATAGCGTGTGGTGCTATAG+GGG | + | chr4_1:67004954-67004973 | Msa0566040:intron | 45.0% |
| TGCTACAGGATACACAGTTG+TGG | + | chr4_1:67004985-67005004 | Msa0566040:intron | 45.0% | |
| AGTGTAGCAACTGCTAATGC+CGG | + | chr4_1:67005016-67005035 | Msa0566040:CDS | 45.0% | |
| CACTATCTCACCATGACAAC+CGG | - | chr4_1:67005038-67005057 | None:intergenic | 45.0% | |
| !!! | TTGTAGTATCGGGTTTTGGG+AGG | + | chr4_1:67005749-67005768 | Msa0566040:intron | 45.0% |
| !! | TTTTGGGAGGCTTATCGGAT+AGG | + | chr4_1:67005762-67005781 | Msa0566040:intron | 45.0% |
| TTTGGGAGGCTTATCGGATA+GGG | + | chr4_1:67005763-67005782 | Msa0566040:intron | 45.0% | |
| TTTACGACCAAGTGGTTACG+TGG | + | chr4_1:67005804-67005823 | Msa0566040:intron | 45.0% | |
| AAGTCCAAGGCTCTTAAGTG+AGG | + | chr4_1:67005887-67005906 | Msa0566040:intron | 45.0% | |
| AGTCCAAGGCTCTTAAGTGA+GGG | + | chr4_1:67005888-67005907 | Msa0566040:intron | 45.0% | |
| ! | TCTTAAGTGAGGGGTGTGTT+AGG | + | chr4_1:67005898-67005917 | Msa0566040:intron | 45.0% |
| ATGCAACCCCATAGCATGTT+TGG | + | chr4_1:67005988-67006007 | Msa0566040:intron | 45.0% | |
| !! | GTTGGACCCTTAGTTTTCCT+CGG | + | chr4_1:67006316-67006335 | Msa0566040:intron | 45.0% |
| !! | TTGGACCCTTAGTTTTCCTC+GGG | + | chr4_1:67006317-67006336 | Msa0566040:intron | 45.0% |
| AGAAGCCCGAGGAAAACTAA+GGG | - | chr4_1:67006325-67006344 | None:intergenic | 45.0% | |
| AACAGGCCCGAGTTATGAAT+GGG | - | chr4_1:67006850-67006869 | None:intergenic | 45.0% | |
| TAACAGGCCCGAGTTATGAA+TGG | - | chr4_1:67006851-67006870 | None:intergenic | 45.0% | |
| TGAGGCCCTTGCAAGATATT+TGG | - | chr4_1:67007280-67007299 | None:intergenic | 45.0% | |
| TCAGGAAACCACAGAGCAAA+TGG | - | chr4_1:67007306-67007325 | None:intergenic | 45.0% | |
| TGCTTATCATTTGGGGATCC+TGG | + | chr4_1:67007365-67007384 | Msa0566040:CDS | 45.0% | |
| TATCATTTGGGGATCCTGGT+TGG | + | chr4_1:67007369-67007388 | Msa0566040:CDS | 45.0% | |
| GGTTTGGCTGTAATAATGGC+TGG | + | chr4_1:67007418-67007437 | Msa0566040:CDS | 45.0% | |
| CATACTTGAGCTTTGCCACT+GGG | - | chr4_1:67007491-67007510 | None:intergenic | 45.0% | |
| ACATACTTGAGCTTTGCCAC+TGG | - | chr4_1:67007492-67007511 | None:intergenic | 45.0% | |
| TACACAGCCTTTGGACATGA+TGG | + | chr4_1:67007701-67007720 | Msa0566040:intron | 45.0% | |
| TGCATCACCATCATGTCCAA+AGG | - | chr4_1:67007711-67007730 | None:intergenic | 45.0% | |
| AAAGTTCCCACCTAGAGATG+TGG | - | chr4_1:67008095-67008114 | None:intergenic | 45.0% | |
| TCTCACGTCACCAAGAGATA+TGG | - | chr4_1:67008155-67008174 | None:intergenic | 45.0% | |
| !! | ATCTCTTGGTGACGTGAGAA+TGG | + | chr4_1:67008156-67008175 | Msa0566040:intron | 45.0% |
| !! | TCTCTTGGTGACGTGAGAAT+GGG | + | chr4_1:67008157-67008176 | Msa0566040:intron | 45.0% |
| CTGCTTAGGGCTATTGAATC+TGG | + | chr4_1:67008211-67008230 | Msa0566040:intron | 45.0% | |
| TTGGGCTTTCAGTATTGTCC+AGG | - | chr4_1:67008239-67008258 | None:intergenic | 45.0% | |
| GCTTATCCTAGAGCTGAAGT+TGG | - | chr4_1:67008258-67008277 | None:intergenic | 45.0% | |
| !! | GCCATATCTCTAGGGTTTCT+AGG | + | chr4_1:67008369-67008388 | Msa0566040:intron | 45.0% |
| CCCTAGAAACCCTAGAGATA+TGG | - | chr4_1:67008373-67008392 | None:intergenic | 45.0% | |
| GTGGGAAGGTCATACTCATT+TGG | + | chr4_1:67008610-67008629 | Msa0566040:intron | 45.0% | |
| ! | TGGTAGGTTTAGAGTAGGAG+GGG | + | chr4_1:67008630-67008649 | Msa0566040:intron | 45.0% |
| GCCAGTGCATGTACTATTAG+CGG | + | chr4_1:67008698-67008717 | Msa0566040:intron | 45.0% | |
| CCAGTGCATGTACTATTAGC+GGG | + | chr4_1:67008699-67008718 | Msa0566040:intron | 45.0% | |
| !! | GCGGGTTTAGAATGCTGTTT+TGG | + | chr4_1:67008717-67008736 | Msa0566040:intron | 45.0% |
| ATATGTCACAACTGGGTCAC+GGG | + | chr4_1:67009170-67009189 | Msa0566040:CDS | 45.0% | |
| ACCAGAAGGAGAATATCGGT+CGG | - | chr4_1:67009199-67009218 | None:intergenic | 45.0% | |
| CTGAAAGCAGCATGTACAAC+AGG | - | chr4_1:67009496-67009515 | None:intergenic | 45.0% | |
| !! | TCATTTGGGTTTGGTGGTTC+AGG | - | chr4_1:67009660-67009679 | None:intergenic | 45.0% |
| TGCCGTTAGACCATACAAGA+TGG | - | chr4_1:67010071-67010090 | None:intergenic | 45.0% | |
| CTTGTATGGTCTAACGGCAA+AGG | + | chr4_1:67010072-67010091 | Msa0566040:CDS | 45.0% | |
| GCAAAGGAGGAAAATTGGCT+GGG | + | chr4_1:67010088-67010107 | Msa0566040:CDS | 45.0% | |
| AATATGGGAGCTTGCCTGTA+TGG | + | chr4_1:67010275-67010294 | Msa0566040:CDS | 45.0% | |
| GTTGCCGTATTGTTCATTGC+TGG | + | chr4_1:67010320-67010339 | Msa0566040:CDS | 45.0% | |
| GTTCATTGCTGGAACATCTC+GGG | + | chr4_1:67010331-67010350 | Msa0566040:CDS | 45.0% | |
| GCGAACTACAGTGCTTTGTA+AGG | - | chr4_1:67010582-67010601 | None:intergenic | 45.0% | |
| ! | GTCTCAAACTGCTAGTTTGC+CGG | + | chr4_1:67010772-67010791 | Msa0566040:CDS | 45.0% |
| ! | AGTAGTGGCCTTGATAGTCA+AGG | + | chr4_1:67010953-67010972 | Msa0566040:CDS | 45.0% |
| ! | GTAGTGGCCTTGATAGTCAA+GGG | + | chr4_1:67010954-67010973 | Msa0566040:CDS | 45.0% |
| CTGAAAAGAAGGACCAGACA+AGG | + | chr4_1:67011079-67011098 | Msa0566040:CDS | 45.0% | |
| GATGATCTCTATCTGCATCC+AGG | - | chr4_1:67011225-67011244 | None:intergenic | 45.0% | |
| TCTGAAGAACTGAGGCTACA+TGG | + | chr4_1:67011301-67011320 | Msa0566040:CDS | 45.0% | |
| CTGAAGAACTGAGGCTACAT+GGG | + | chr4_1:67011302-67011321 | Msa0566040:CDS | 45.0% | |
| AGAAATGGCTTCAGTTGTGC+AGG | + | chr4_1:67011329-67011348 | Msa0566040:CDS | 45.0% | |
| !!! | TTTTGTAATTTTATTATTTA+TGG | + | chr4_1:67005420-67005439 | Msa0566040:intron | 5.0% |
| GGAGACCCTGGCGAATTTAT+AGG | + | chr4_1:67004461-67004480 | Msa0566040:CDS | 50.0% | |
| TCGGTGTAGTCAATAGCGTG+TGG | + | chr4_1:67004943-67004962 | Msa0566040:intron | 50.0% | |
| ! | ACTGCTAATGCCGGTTGTCA+TGG | + | chr4_1:67005025-67005044 | Msa0566040:CDS | 50.0% |
| CTTGCAGTGACCGACAAATG+AGG | - | chr4_1:67005193-67005212 | None:intergenic | 50.0% | |
| AGCAGGATAGCCTCTATGCT+TGG | - | chr4_1:67005241-67005260 | None:intergenic | 50.0% | |
| GGTAGGCTGTAGCTGCAAAA+GGG | - | chr4_1:67005341-67005360 | None:intergenic | 50.0% | |
| TGGTAGGCTGTAGCTGCAAA+AGG | - | chr4_1:67005342-67005361 | None:intergenic | 50.0% | |
| !!! | TCGGGTTTTGGGAGGCTTAT+CGG | + | chr4_1:67005757-67005776 | Msa0566040:intron | 50.0% |
| GGATCAACCACGTAACCACT+TGG | - | chr4_1:67005814-67005833 | None:intergenic | 50.0% | |
| GTCCAAGGCTCTTAAGTGAG+GGG | + | chr4_1:67005889-67005908 | Msa0566040:intron | 50.0% | |
| AACCACAGCCTGTTCTCACT+TGG | + | chr4_1:67006190-67006209 | Msa0566040:intron | 50.0% | |
| TGACCACACCAAGTGAGAAC+AGG | - | chr4_1:67006201-67006220 | None:intergenic | 50.0% | |
| ! | CTTGGTGTGGTCAGATCAGA+TGG | + | chr4_1:67006208-67006227 | Msa0566040:intron | 50.0% |
| GAGAAGCCCGAGGAAAACTA+AGG | - | chr4_1:67006326-67006345 | None:intergenic | 50.0% | |
| GTTAGATGTAGAGAAGCCCG+AGG | - | chr4_1:67006336-67006355 | None:intergenic | 50.0% | |
| CAAGATGGCCAAGCAAAGGA+GGG | - | chr4_1:67006518-67006537 | None:intergenic | 50.0% | |
| ACAGCAAGATGGCCAAGCAA+AGG | - | chr4_1:67006522-67006541 | None:intergenic | 50.0% | |
| TCAGTCCTATGTGGCATTGC+TGG | + | chr4_1:67006591-67006610 | Msa0566040:intron | 50.0% | |
| CTTGACCAGCAATGCCACAT+AGG | - | chr4_1:67006599-67006618 | None:intergenic | 50.0% | |
| TTGCTGGTCAAGTAGCCATG+TGG | + | chr4_1:67006607-67006626 | Msa0566040:intron | 50.0% | |
| GCTGGATCTTTGCTCGGAAA+TGG | + | chr4_1:67007254-67007273 | Msa0566040:intron | 50.0% | |
| CCACAGAGCAAATGGAGTTG+AGG | - | chr4_1:67007298-67007317 | None:intergenic | 50.0% | |
| CCTCAACTCCATTTGCTCTG+TGG | + | chr4_1:67007295-67007314 | Msa0566040:CDS | 50.0% | |
| GTTTCCTGAACCTTTCAGCG+TGG | + | chr4_1:67007317-67007336 | Msa0566040:CDS | 50.0% | |
| CAACAACAGACCACGCTGAA+AGG | - | chr4_1:67007330-67007349 | None:intergenic | 50.0% | |
| ! | GGATCGACACCTGATTGGTT+TGG | + | chr4_1:67007402-67007421 | Msa0566040:CDS | 50.0% |
| GGCTGGAACTGCTCTCTTAT+TGG | + | chr4_1:67007435-67007454 | Msa0566040:CDS | 50.0% | |
| GCAACTCCACAACCACTCAT+CGG | - | chr4_1:67007872-67007891 | None:intergenic | 50.0% | |
| !! | ATGGGACTAGCCACATCTCT+AGG | + | chr4_1:67008082-67008101 | Msa0566040:intron | 50.0% |
| ! | GACTAGCCACATCTCTAGGT+GGG | + | chr4_1:67008086-67008105 | Msa0566040:intron | 50.0% |
| !! | CTCTTGGTGACGTGAGAATG+GGG | + | chr4_1:67008158-67008177 | Msa0566040:intron | 50.0% |
| GAAAGCCCAACTTCAGCTCT+AGG | + | chr4_1:67008249-67008268 | Msa0566040:intron | 50.0% | |
| CCCGCTAATAGTACATGCAC+TGG | - | chr4_1:67008702-67008721 | None:intergenic | 50.0% | |
| GAGCAACAGCTAGAAGAAGC+AGG | - | chr4_1:67009122-67009141 | None:intergenic | 50.0% | |
| TCCGACCGATATTCTCCTTC+TGG | + | chr4_1:67009195-67009214 | Msa0566040:CDS | 50.0% | |
| ACCATTGCTCATGCAGGGAA+TGG | + | chr4_1:67009552-67009571 | Msa0566040:intron | 50.0% | |
| TGCAGGGAATGGCTTAGATG+TGG | + | chr4_1:67009563-67009582 | Msa0566040:intron | 50.0% | |
| GTATGGTCTAACGGCAAAGG+AGG | + | chr4_1:67010075-67010094 | Msa0566040:CDS | 50.0% | |
| GGCAAAGGAGGAAAATTGGC+TGG | + | chr4_1:67010087-67010106 | Msa0566040:CDS | 50.0% | |
| GCATCTCTCCTTGCAGCTAA+TGG | - | chr4_1:67010560-67010579 | None:intergenic | 50.0% | |
| ACTGTAGTTCGCCTGAGAGA+AGG | + | chr4_1:67010590-67010609 | Msa0566040:CDS | 50.0% | |
| ! | CAAACTGCTAGTTTGCCGGA+CGG | + | chr4_1:67010776-67010795 | Msa0566040:CDS | 50.0% |
| GCTGCTCATGAACCTGAAGT+TGG | + | chr4_1:67010875-67010894 | Msa0566040:CDS | 50.0% | |
| GGCTACATGGGCTTGAGAAA+TGG | + | chr4_1:67011314-67011333 | Msa0566040:CDS | 50.0% | |
| ATGGAAGAAGGGGGTGACCA+TGG | + | chr4_1:67004355-67004374 | Msa0566040:exon | 55.0% | |
| TGGAAGAAGGGGGTGACCAT+GGG | + | chr4_1:67004356-67004375 | Msa0566040:exon | 55.0% | |
| ! | TGGGTCCCTCTTCTCCGTTT+TGG | + | chr4_1:67004402-67004421 | Msa0566040:CDS | 55.0% |
| ! | GGGTCCCTCTTCTCCGTTTT+GGG | + | chr4_1:67004403-67004422 | Msa0566040:CDS | 55.0% |
| GGGCTGTTAATTGGAGACCC+TGG | + | chr4_1:67004449-67004468 | Msa0566040:CDS | 55.0% | |
| !! | TGTGGTGCTATAGGGGCTCT+TGG | + | chr4_1:67004961-67004980 | Msa0566040:intron | 55.0% |
| GCAGTGACCGACAAATGAGG+AGG | - | chr4_1:67005190-67005209 | None:intergenic | 55.0% | |
| CACCCCTCACTTAAGAGCCT+TGG | - | chr4_1:67005894-67005913 | None:intergenic | 55.0% | |
| CACCAAGTGAGAACAGGCTG+TGG | - | chr4_1:67006195-67006214 | None:intergenic | 55.0% | |
| ! | CAGCCTGTTCTCACTTGGTG+TGG | + | chr4_1:67006195-67006214 | Msa0566040:intron | 55.0% |
| GCAAGATGGCCAAGCAAAGG+AGG | - | chr4_1:67006519-67006538 | None:intergenic | 55.0% | |
| CAGACCACGCTGAAAGGTTC+AGG | - | chr4_1:67007324-67007343 | None:intergenic | 55.0% | |
| TTGCTGGATGCTCCGATGAG+TGG | + | chr4_1:67007857-67007876 | Msa0566040:intron | 55.0% | |
| GATGCTCCGATGAGTGGTTG+TGG | + | chr4_1:67007863-67007882 | Msa0566040:intron | 55.0% | |
| !! | GGACTAGCCACATCTCTAGG+TGG | + | chr4_1:67008085-67008104 | Msa0566040:intron | 55.0% |
| GGGCTATTGAATCTGGTGCC+TGG | + | chr4_1:67008218-67008237 | Msa0566040:intron | 55.0% | |
| ! | CTAGGGTTTCTAGGGGTCTG+AGG | + | chr4_1:67008378-67008397 | Msa0566040:intron | 55.0% |
| ! | GTTTCTAGGGGTCTGAGGCT+TGG | + | chr4_1:67008383-67008402 | Msa0566040:intron | 55.0% |
| !! | ACTGGCTTGGCTGAAGAGGT+AGG | - | chr4_1:67008684-67008703 | None:intergenic | 55.0% |
| !! | ATGCACTGGCTTGGCTGAAG+AGG | - | chr4_1:67008688-67008707 | None:intergenic | 55.0% |
| TGTGTGTGTGTGCCGCAATG+AGG | - | chr4_1:67008933-67008952 | None:intergenic | 55.0% | |
| CTTCGGCATATCACGCACCT+CGG | - | chr4_1:67009008-67009027 | None:intergenic | 55.0% | |
| GCCATTCCCTGCATGAGCAA+TGG | - | chr4_1:67009556-67009575 | None:intergenic | 55.0% | |
| ! | TGGTATTGAGGTGGGTCCTG+TGG | + | chr4_1:67009626-67009645 | Msa0566040:CDS | 55.0% |
| GGTTCAGGCAAACAAGCCAC+AGG | - | chr4_1:67009645-67009664 | None:intergenic | 55.0% | |
| ! | CGGAGCAGTAGTGTTGAAGC+TGG | + | chr4_1:67010677-67010696 | Msa0566040:CDS | 55.0% |
| CATTGAAGCTAGCAGGGGTC+TGG | + | chr4_1:67010715-67010734 | Msa0566040:CDS | 55.0% | |
| !! | CTGCAGGTGATGGGAGCAAT+TGG | + | chr4_1:67010738-67010757 | Msa0566040:CDS | 55.0% |
| TTCATGAGCAGCTGAGCGAC+AGG | - | chr4_1:67010867-67010886 | None:intergenic | 55.0% | |
| TAGGGGCTCTTGGCTGCTAC+AGG | + | chr4_1:67004971-67004990 | Msa0566040:intron | 60.0% | |
| GAGGGAGACGGGATAGGATC+AGG | - | chr4_1:67006500-67006519 | None:intergenic | 60.0% | |
| GCAAAGGAGGGAGACGGGAT+AGG | - | chr4_1:67006506-67006525 | None:intergenic | 60.0% | |
| TCCCGTCTCCCTCCTTTGCT+TGG | + | chr4_1:67006507-67006526 | Msa0566040:intron | 60.0% | |
| GCCAAGCAAAGGAGGGAGAC+GGG | - | chr4_1:67006511-67006530 | None:intergenic | 60.0% | |
| GGCCAAGCAAAGGAGGGAGA+CGG | - | chr4_1:67006512-67006531 | None:intergenic | 60.0% | |
| ! | TGCTGTGGTGGAGAACCCAG+TGG | + | chr4_1:67007473-67007492 | Msa0566040:CDS | 60.0% |
| CGAGGTGCGTGATATGCCGA+AGG | + | chr4_1:67009006-67009025 | Msa0566040:intron | 60.0% | |
| CAGCTCACGGTCACCTTGTC+TGG | - | chr4_1:67011095-67011114 | None:intergenic | 60.0% | |
| GGGTACTCCAGAACGAGCGT+GGG | + | chr4_1:67011371-67011390 | Msa0566040:three_prime_UTR | 60.0% | |
| GGTGAGGCTGCTCTAGCCTG+TGG | - | chr4_1:67004900-67004919 | None:intergenic | 65.0% | |
| AGGGGTCTGGCTGCAGGTGA+TGG | + | chr4_1:67010728-67010747 | Msa0566040:CDS | 65.0% | |
| GGGGTCTGGCTGCAGGTGAT+GGG | + | chr4_1:67010729-67010748 | Msa0566040:CDS | 65.0% | |
| CGGGTACTCCAGAACGAGCG+TGG | + | chr4_1:67011370-67011389 | Msa0566040:three_prime_UTR | 65.0% | |
| GCTAGCAGGGGTCTGGCTGC+AGG | + | chr4_1:67010722-67010741 | Msa0566040:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 67003919 | 67011397 | 67003919 | ID=Msa0566040;Name=Msa0566040 |
| chr4_1 | mRNA | 67003919 | 67011397 | 67003919 | ID=Msa0566040-mRNA-1;Parent=Msa0566040;Name=Msa0566040-mRNA-1;_AED=0.02;_eAED=0.02;_QI=455|0.57|0.75|0.87|1|1|8|28|637 |
| chr4_1 | exon | 67003919 | 67004482 | 67003919 | ID=Msa0566040-mRNA-1:exon:21854;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67004993 | 67005071 | 67004993 | ID=Msa0566040-mRNA-1:exon:21855;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67007255 | 67007505 | 67007255 | ID=Msa0566040-mRNA-1:exon:21856;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67009106 | 67009288 | 67009106 | ID=Msa0566040-mRNA-1:exon:21857;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67009568 | 67009713 | 67009568 | ID=Msa0566040-mRNA-1:exon:21858;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67010010 | 67010142 | 67010010 | ID=Msa0566040-mRNA-1:exon:21859;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67010270 | 67010384 | 67010270 | ID=Msa0566040-mRNA-1:exon:21860;Parent=Msa0566040-mRNA-1 |
| chr4_1 | exon | 67010472 | 67011397 | 67010472 | ID=Msa0566040-mRNA-1:exon:21861;Parent=Msa0566040-mRNA-1 |
| chr4_1 | five_prime_UTR | 67003919 | 67004373 | 67003919 | ID=Msa0566040-mRNA-1:five_prime_utr;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67004374 | 67004482 | 67004374 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67004993 | 67005071 | 67004993 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67007255 | 67007505 | 67007255 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67009106 | 67009288 | 67009106 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67009568 | 67009713 | 67009568 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67010010 | 67010142 | 67010010 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67010270 | 67010384 | 67010270 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | CDS | 67010472 | 67011369 | 67010472 | ID=Msa0566040-mRNA-1:cds;Parent=Msa0566040-mRNA-1 |
| chr4_1 | three_prime_UTR | 67011370 | 67011397 | 67011370 | ID=Msa0566040-mRNA-1:three_prime_utr;Parent=Msa0566040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
