AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0338960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338960 MtrunA17_Chr2g0327001 89.689 708 21 2 1 658 1 706 0.0 1249
Msa0338960 MtrunA17_Chr2g0326991 93.538 325 17 2 643 963 12 336 0.0 635
Msa0338960 MtrunA17_Chr7g0264371 40.749 454 240 5 495 944 457 885 1.66e-93 325
Msa0338960 MtrunA17_Chr4g0052341 31.198 359 210 9 513 857 949 1284 5.26e-37 152
Msa0338960 MtrunA17_Chr3g0137091 27.715 267 163 7 526 787 515 756 7.94e-23 105
Msa0338960 MtrunA17_Chr4g0066741 29.897 291 162 11 515 796 384 641 1.03e-22 105
Msa0338960 MtrunA17_Chr5g0442141 27.642 246 160 4 542 787 851 1078 1.10e-22 105
Msa0338960 MtrunA17_Chr3g0095091 28.862 246 157 5 542 787 805 1032 2.36e-22 104
Msa0338960 MtrunA17_Chr1g0205891 29.412 221 128 5 580 800 650 842 9.35e-21 98.6
Msa0338960 MtrunA17_Chr5g0394201 28.054 221 130 5 580 800 637 828 3.98e-20 96.7
Msa0338960 MtrunA17_Chr7g0231521 29.148 223 120 6 579 790 248 443 1.01e-18 91.7
Msa0338960 MtrunA17_Chr2g0286291 30.584 291 160 11 515 796 387 644 1.76e-18 91.3
Msa0338960 MtrunA17_Chr7g0232121 28.378 222 121 6 580 790 328 522 2.79e-18 90.5
Msa0338960 MtrunA17_Chr4g0066651 26.396 197 125 4 580 776 1266 1442 4.48e-18 90.5
Msa0338960 MtrunA17_Chr5g0403921 28.500 200 116 5 580 777 467 641 6.08e-16 82.8
Msa0338960 MtrunA17_Chr5g0393461 26.341 205 135 5 581 776 476 673 5.74e-15 79.7
Msa0338960 MtrunA17_Chr4g0028821 36.364 209 118 5 265 459 33 240 8.97e-15 79.3
Msa0338960 MtrunA17_Chr7g0257101 31.169 154 97 3 633 786 1191 1335 1.73e-14 78.6
Msa0338960 MtrunA17_Chr1g0175191 33.117 154 94 4 634 787 1062 1206 9.49e-14 76.3
Msa0338960 MtrunA17_Chr7g0248031 26.519 181 106 4 586 766 1292 1445 1.56e-13 75.5
Msa0338960 MtrunA17_Chr8g0348721 25.967 181 107 4 586 766 1284 1437 2.36e-13 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338960 AT1G08060.1 31.529 942 509 30 38 945 30 869 2.18e-90 317
Msa0338960 AT1G08060.2 31.529 942 509 30 38 945 30 869 2.18e-90 317
Msa0338960 AT1G08060.3 31.495 943 509 31 38 945 30 870 1.69e-89 314
Msa0338960 AT5G44800.1 32.166 314 182 8 507 812 887 1177 1.24e-37 154
Msa0338960 AT2G25170.1 28.195 266 163 7 526 787 499 740 2.64e-24 110
Msa0338960 AT2G25170.4 28.195 266 163 7 526 787 499 740 2.64e-24 110
Msa0338960 AT2G25170.2 28.195 266 163 7 526 787 516 757 3.52e-24 110
Msa0338960 AT2G25170.3 28.195 266 163 7 526 787 525 766 4.48e-24 110
Msa0338960 AT4G31900.1 28.731 268 162 6 548 812 456 697 1.69e-23 108
Msa0338960 AT4G31900.3 28.731 268 162 6 548 812 456 697 1.76e-23 108
Msa0338960 AT2G13370.1 29.268 246 154 6 542 787 859 1084 1.89e-23 108
Msa0338960 AT2G13370.2 29.268 246 154 6 542 787 859 1084 1.89e-23 108
Msa0338960 AT2G13370.3 29.268 246 154 6 542 787 859 1084 1.89e-23 108
Msa0338960 AT4G31900.2 28.731 268 162 6 548 812 415 656 3.30e-23 107
Msa0338960 AT3G06010.1 30.317 221 126 6 580 800 677 869 1.30e-21 102
Msa0338960 AT5G19310.2 27.239 268 145 7 580 847 395 612 2.25e-20 97.4
Msa0338960 AT5G19310.1 27.239 268 145 7 580 847 659 876 2.44e-20 97.8
Msa0338960 AT2G44980.1 30.476 210 119 6 580 789 331 513 8.82e-20 95.9
Msa0338960 AT2G44980.3 29.545 220 118 7 580 789 339 531 1.52e-18 91.7
Msa0338960 AT2G44980.2 29.545 220 118 7 580 789 340 532 1.89e-18 91.7
Msa0338960 AT3G06400.3 29.010 293 162 11 515 796 385 642 3.67e-16 84.3
Msa0338960 AT3G06400.2 29.010 293 162 11 515 796 385 642 4.00e-16 84.0
Msa0338960 AT3G06400.1 29.010 293 162 11 515 796 385 642 4.14e-16 84.0
Msa0338960 AT2G28290.3 25.000 200 124 4 580 776 1031 1207 4.88e-16 84.3
Msa0338960 AT2G28290.4 25.000 200 124 4 580 776 1031 1207 4.88e-16 84.3
Msa0338960 AT2G28290.2 25.000 200 124 4 580 776 1031 1207 4.92e-16 84.3
Msa0338960 AT2G28290.1 25.000 200 124 4 580 776 1031 1207 5.01e-16 84.3
Msa0338960 AT2G28290.6 25.000 200 124 4 580 776 1032 1208 5.05e-16 84.3
Msa0338960 AT2G28290.5 25.000 200 124 4 580 776 1032 1208 5.10e-16 84.3
Msa0338960 AT5G18620.2 29.210 291 164 11 515 796 390 647 3.33e-15 81.3
Msa0338960 AT5G18620.1 29.210 291 164 11 515 796 390 647 3.56e-15 80.9
Msa0338960 AT3G19210.2 26.733 202 130 6 585 776 474 667 5.79e-15 80.1
Msa0338960 AT3G19210.1 26.733 202 130 6 585 776 476 669 5.85e-15 80.1
Msa0338960 AT3G19210.3 26.733 202 130 6 585 776 476 669 1.01e-14 79.3
Msa0338960 AT3G57300.1 31.818 154 96 3 633 786 1205 1349 2.57e-14 78.6
Msa0338960 AT3G57300.4 31.818 154 96 3 633 786 1205 1349 2.57e-14 78.6
Msa0338960 AT3G57300.2 31.818 154 96 3 633 786 1238 1382 3.28e-14 78.2
Msa0338960 AT2G46020.5 26.455 189 110 5 586 774 1278 1437 5.36e-14 77.4
Msa0338960 AT2G46020.1 26.455 189 110 5 586 774 1278 1437 5.36e-14 77.4
Msa0338960 AT2G46020.6 26.455 189 110 5 586 774 1278 1437 5.36e-14 77.4
Msa0338960 AT2G46020.2 26.455 189 110 5 586 774 1279 1438 5.40e-14 77.4
Msa0338960 AT2G46020.3 26.455 189 110 5 586 774 1279 1438 5.40e-14 77.4
Msa0338960 AT2G46020.4 26.455 189 110 5 586 774 1279 1438 5.40e-14 77.4
Msa0338960 AT3G12810.2 32.468 154 95 4 634 787 1071 1215 7.50e-13 73.6
Msa0338960 AT3G12810.1 32.468 154 95 4 634 787 1075 1219 8.03e-13 73.6
Msa0338960 AT2G18760.4 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.1 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.2 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.7 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.5 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.6 27.700 213 124 7 567 776 675 860 1.70e-12 72.4
Msa0338960 AT2G18760.3 27.700 213 124 7 567 776 734 919 3.64e-12 71.2
Msa0338960 AT5G66750.1 27.363 201 119 5 579 777 484 659 4.46e-12 70.9

Find 216 sgRNAs with CRISPR-Local

Find 602 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGACTTTCTTCTGGTTTC+AGG 0.121014 2_4:+59691946 None:intergenic
TTGCAGCCAATTGGAGTTTC+TGG 0.127942 2_4:-59685853 Msa0338960:intron
GACTTCAATAGTAGATATTT+TGG 0.151658 2_4:-59685827 Msa0338960:CDS
GCAATCAGGCTGTCCTCTTC+TGG 0.160581 2_4:+59690744 None:intergenic
CCAATACTCAACCAACTTAT+AGG 0.217941 2_4:+59688776 None:intergenic
CTATAAGTTGGTTGAGTATT+GGG 0.266587 2_4:-59688775 Msa0338960:CDS
AATATTCATGCTCTTCTTGA+TGG 0.282167 2_4:-59688864 Msa0338960:CDS
CCACCTGCCAAATTATTAAA+AGG 0.282627 2_4:+59685073 None:intergenic
CTTGCAAATTCTCCTTTGTT+TGG 0.294283 2_4:-59685223 Msa0338960:CDS
GTGATTGCCTTTCTCTTAGA+AGG 0.299551 2_4:+59690616 None:intergenic
AACACCAAAGTACCTTTCTT+TGG 0.302134 2_4:+59691655 None:intergenic
CGCCAAAGATTGATAGTGTT+GGG 0.316629 2_4:-59688674 Msa0338960:CDS
TTCTCCTTTGTTTGGTGAGC+AGG 0.318071 2_4:-59685215 Msa0338960:CDS
AAGAGGTACCACAAACGTTT+TGG 0.320834 2_4:-59685174 Msa0338960:CDS
TACTATTGTCACCTTTGCTT+TGG 0.322894 2_4:+59691139 None:intergenic
ATGCAGTGATTGTCAGATTC+AGG 0.328298 2_4:-59693533 Msa0338960:intron
CTGTTGTCACCTTCCTGATT+TGG 0.329278 2_4:+59691300 None:intergenic
AAGGATGAAGAAAATAATAA+TGG 0.331335 2_4:-59692132 Msa0338960:CDS
GAGGTTGCAATTATCTTTGA+TGG 0.335688 2_4:+59692018 None:intergenic
CTTCGTGGCAGCTTGCTTCT+TGG 0.336052 2_4:+59685738 None:intergenic
GAACAATTCAGGGTCGGTTT+TGG 0.341011 2_4:+59693590 None:intergenic
GGTAGGCTCCTCCATGTTGC+TGG 0.344073 2_4:+59685245 None:intergenic
TAACCTTCCGGATTGAAATA+AGG 0.345295 2_4:+59688637 None:intergenic
ACTCTAGGATTGGCGATAAA+AGG 0.348369 2_4:-59691164 Msa0338960:CDS
CAGGGATTCTTCAATAATAT+AGG 0.350903 2_4:+59687117 None:intergenic
TGACAGACGAAGAACAATTC+AGG 0.353193 2_4:+59693579 None:intergenic
TACTGTTGTCAGCTTTGCTT+TGG 0.353876 2_4:+59690980 None:intergenic
TTTAGATAACTCATCAATCT+TGG 0.356158 2_4:+59690951 None:intergenic
GACTTCCTGCGACAAAGATT+TGG 0.357254 2_4:-59685802 Msa0338960:CDS
CAACAAGTACCTTATTCGTT+TGG 0.360471 2_4:+59690489 None:intergenic
CAATCAGGCTGTCCTCTTCT+GGG 0.365614 2_4:+59690745 None:intergenic
CCTATAAGTTGGTTGAGTAT+TGG 0.366376 2_4:-59688776 Msa0338960:CDS
CCTTTAGTAGTAAAGGTTGC+AGG 0.367068 2_4:+59687098 None:intergenic
TTTAGACAACTCATCAATCT+TGG 0.367252 2_4:+59691110 None:intergenic
AGTCATGTTCCAAACGAATA+AGG 0.367317 2_4:-59690498 Msa0338960:intron
TGTTTGGTGAGCAGGAATTT+AGG 0.371430 2_4:-59685207 Msa0338960:CDS
TTTAGATAACTCGTCAATCT+TGG 0.373964 2_4:+59691269 None:intergenic
GACCCTTACAGACTTTCTTC+TGG 0.376367 2_4:+59691939 None:intergenic
AGGGATTCTTCAATAATATA+GGG 0.380308 2_4:+59687118 None:intergenic
AGCGACCACGCAAGTGGAAC+TGG 0.390801 2_4:-59689003 Msa0338960:CDS
TTTCTTCTGGTTTCAGGAGC+TGG 0.396574 2_4:+59691952 None:intergenic
GCCCCAACACTATCAATCTT+TGG 0.398218 2_4:+59688672 None:intergenic
AAGTGGAACTGGACACCTTA+AGG 0.400108 2_4:-59688992 Msa0338960:intron
TGGTATCAGAGAGTTACTTA+TGG 0.401312 2_4:+59693610 None:intergenic
CCAGATCTCGTCAAAGGACT+TGG 0.402758 2_4:+59691895 None:intergenic
CCAAGTCCTTTGACGAGATC+TGG 0.414240 2_4:-59691895 Msa0338960:CDS
TCACTTGACACTTTCTCCTT+CGG 0.414496 2_4:+59688825 None:intergenic
GTCAGTAACAATGCTGGTCT+TGG 0.415618 2_4:-59690658 Msa0338960:CDS
TCAGCTTTGCTTTGGCACCT+TGG 0.418871 2_4:+59690988 None:intergenic
TCATAAGTTGGGGTGTTAGA+TGG 0.419758 2_4:+59690781 None:intergenic
TAATATTAGCAAGCCAAATC+AGG 0.420097 2_4:-59691313 Msa0338960:CDS
TTATTATATTTGACAGTGAC+TGG 0.423324 2_4:-59685624 Msa0338960:CDS
TCTAAAAGTGCAGGTTCTCT+TGG 0.425022 2_4:-59691835 Msa0338960:CDS
CCACACTAGTCTCATAAGTT+GGG 0.433671 2_4:+59690770 None:intergenic
TTATTGAATTTGCAGCCAAT+TGG 0.439698 2_4:-59685862 Msa0338960:intron
GTCTCCTCTTCGCAGCAATC+AGG 0.440266 2_4:+59690730 None:intergenic
CAACTGTCAATCTTCAAGTC+GGG 0.442138 2_4:-59685458 Msa0338960:CDS
AAGAATTGATAATTGTCTTA+CGG 0.443975 2_4:-59685764 Msa0338960:CDS
CCTGCAACCTTTACTACTAA+AGG 0.445612 2_4:-59687098 Msa0338960:CDS
AGTAACAATGCTGGTCTTGG+TGG 0.447199 2_4:-59690655 Msa0338960:CDS
AGATTATTCCAAAACGTTTG+TGG 0.448392 2_4:+59685166 None:intergenic
GTTCCTTCCTCATTATCTAA+AGG 0.450248 2_4:-59690574 Msa0338960:CDS
TCAAGGCCCTTTAGTAGTAA+AGG 0.452061 2_4:+59687091 None:intergenic
CAGTGAAAGGTGAATATAAA+CGG 0.455551 2_4:+59685530 None:intergenic
CTGCAACCTTTACTACTAAA+GGG 0.460344 2_4:-59687097 Msa0338960:CDS
GTCTTTCCAGAAACTCCAAT+TGG 0.463218 2_4:+59685847 None:intergenic
GTAACAATGCTGGTCTTGGT+GGG 0.464546 2_4:-59690654 Msa0338960:CDS
GATGCTCTCCCTTCAAAACT+AGG 0.466915 2_4:-59690529 Msa0338960:CDS
AAGTACTCGTTCTAGTCAAA+AGG 0.469700 2_4:-59692157 Msa0338960:CDS
AGGATGAAGAAAATAATAAT+GGG 0.471183 2_4:-59692131 Msa0338960:CDS
TAAAGAGAGACCGATACATC+AGG 0.472782 2_4:+59691683 None:intergenic
ACCACACTAGTCTCATAAGT+TGG 0.474423 2_4:+59690769 None:intergenic
GCAGAAAATTGTGCGACTCC+TGG 0.474505 2_4:-59690814 Msa0338960:CDS
AAGATTGACAGTTGATGTCC+AGG 0.475817 2_4:+59685467 None:intergenic
TCTGTCTCCTTTAGATAATG+AGG 0.475981 2_4:+59690567 None:intergenic
TAACCTGCCTTGATTCCATT+GGG 0.480647 2_4:+59684953 None:intergenic
TTCACCAACATCAGCTAGAC+AGG 0.482437 2_4:+59685306 None:intergenic
AAACCAGAAGAAAGTCTGTA+AGG 0.485038 2_4:-59691942 Msa0338960:CDS
TCGGATACTCAACTTCTTCA+AGG 0.488143 2_4:+59687074 None:intergenic
TGGTGGGGAGACAGTTTCAA+TGG 0.489248 2_4:-59685141 Msa0338960:CDS
GCCGTTGCATATCTGAATGT+TGG 0.489341 2_4:-59687037 Msa0338960:CDS
GGGATCTTATATCATTCATC+GGG 0.492977 2_4:+59685599 None:intergenic
GAAGTCTGAGCAAGTAGAGA+AGG 0.494621 2_4:-59691983 Msa0338960:CDS
CAGTCATACTCTCTTGATGT+GGG 0.495048 2_4:-59685431 Msa0338960:CDS
GGTACACTTCCATTCGAAGA+TGG 0.495317 2_4:-59691051 Msa0338960:CDS
GTCAAATCTAAAACCACTGC+TGG 0.495553 2_4:-59685353 Msa0338960:CDS
AGCAAAGCTGACAACAGTAT+TGG 0.495828 2_4:-59690976 Msa0338960:CDS
CTAACCTGCCTTGATTCCAT+TGG 0.495999 2_4:+59684952 None:intergenic
CTTGTCGTTAAATATCTTCG+TGG 0.497386 2_4:+59685723 None:intergenic
AGAAAGCTTTGATTCTCTCT+AGG 0.499343 2_4:-59685501 Msa0338960:CDS
TGCATGGATTGTAACGGAAT+CGG 0.502489 2_4:+59693551 None:intergenic
ATTAGCACCTTCTAAGAGAA+AGG 0.503047 2_4:-59690623 Msa0338960:CDS
TAACAATGCTGGTCTTGGTG+GGG 0.504302 2_4:-59690653 Msa0338960:CDS
TTGCTGTGCCTTCATTCACA+TGG 0.504874 2_4:+59685044 None:intergenic
GTTTGTGGTACCTCTTCATC+CGG 0.506483 2_4:+59685181 None:intergenic
ACCAGCTGTATCCGATACAT+TGG 0.507922 2_4:+59692065 None:intergenic
AATAAAGAAGTCTCAAAGAA+TGG 0.509972 2_4:-59690913 Msa0338960:CDS
GTGATGTCCTTATTTCAATC+CGG 0.515336 2_4:-59688644 Msa0338960:CDS
GAAACTGTTTCTTCCAGCAG+TGG 0.515731 2_4:+59685340 None:intergenic
GCTTTGGCACCTTGGCTCGT+CGG 0.516761 2_4:+59690996 None:intergenic
TTTGCTGTGGCATCTTCCGA+TGG 0.516789 2_4:+59691201 None:intergenic
TGACGAGATCTGGCAAAACT+AGG 0.516814 2_4:-59691885 Msa0338960:CDS
CCTTCAGATTCTAAAAGTGC+AGG 0.517278 2_4:-59691844 Msa0338960:CDS
GCTTTCTCTTCAACAGTGAA+AGG 0.517856 2_4:+59685517 None:intergenic
AAGATTGATGAGTTGTCTAA+AGG 0.518469 2_4:-59691108 Msa0338960:CDS
CAAAGGAGAATTTGCAAGGT+AGG 0.519401 2_4:+59685228 None:intergenic
AAGATTGATGAGTTATCTAA+AGG 0.520908 2_4:-59690949 Msa0338960:CDS
CTTCGCCAAATCTTTGTCGC+AGG 0.522512 2_4:+59685797 None:intergenic
ACGTGGAAGTTGCACCGTCA+TGG 0.523243 2_4:+59685374 None:intergenic
AACAATGCTGGTCTTGGTGG+GGG 0.523275 2_4:-59690652 Msa0338960:CDS
AATCAAGTGTCAACTTCTGA+AGG 0.523667 2_4:+59685578 None:intergenic
GTGGTTCATCTCAGCGGAGC+CGG 0.527856 2_4:-59685108 Msa0338960:CDS
GCAATTGACATTTGAAGCCA+AGG 0.529890 2_4:-59691770 Msa0338960:CDS
AATGAAGAAGTCTCGAAGAA+TGG 0.531524 2_4:-59691072 Msa0338960:CDS
CCAGCTGTATCCGATACATT+GGG 0.532302 2_4:+59692066 None:intergenic
GCTCTTATCCTTCTGCTGCA+CGG 0.532672 2_4:+59689023 None:intergenic
GTACACTTCCATTCGAAGAT+GGG 0.532964 2_4:-59691050 Msa0338960:CDS
AGGGATCTTATATCATTCAT+CGG 0.533852 2_4:+59685598 None:intergenic
TTTGCTTTCCCATCTTCGAA+TGG 0.533992 2_4:+59691042 None:intergenic
TAAAAGGCTGAACTCTCCTC+CGG 0.534530 2_4:+59685089 None:intergenic
AAGATTGACGAGTTATCTAA+AGG 0.535496 2_4:-59691267 Msa0338960:CDS
AAATGACCGCCCTGATGTAT+CGG 0.537626 2_4:-59691693 Msa0338960:CDS
TCGCCAAAGATTGATAGTGT+TGG 0.541310 2_4:-59688675 Msa0338960:CDS
AATCAAGGCAGGTTAGTGTC+TGG 0.541485 2_4:-59684945 Msa0338960:exon
TCAGTCATACTCTCTTGATG+TGG 0.541720 2_4:-59685432 Msa0338960:CDS
TCCAACATTCAGATATGCAA+CGG 0.542893 2_4:+59687036 None:intergenic
TCATCCTGTCTAGCTGATGT+TGG 0.545160 2_4:-59685310 Msa0338960:CDS
ACATTACGAACATTAGTGTC+AGG 0.548962 2_4:-59690709 Msa0338960:CDS
CAAGGAAGTGAATGAAAATG+AGG 0.550037 2_4:-59691752 Msa0338960:CDS
AAAGTTACCCAATGGAATCA+AGG 0.551364 2_4:-59684960 Msa0338960:CDS
CTTTAGTAGTAAAGGTTGCA+GGG 0.552129 2_4:+59687099 None:intergenic
TGTGCCTTCATTCACATGGT+CGG 0.552921 2_4:+59685048 None:intergenic
ACCACAGTTGACTCTAGGAT+TGG 0.555381 2_4:-59691174 Msa0338960:CDS
AAAAGCACATCCCAATGTAT+CGG 0.555771 2_4:-59692076 Msa0338960:CDS
GACAGACGAAGAACAATTCA+GGG 0.557426 2_4:+59693580 None:intergenic
TGAGGAAACCGTGCAGCAGA+AGG 0.559354 2_4:-59689031 Msa0338960:CDS
TGAGCAGGAATTTAGGTCGC+CGG 0.563570 2_4:-59685200 Msa0338960:CDS
CAAGTCGGACTCCTATAAGT+TGG 0.564538 2_4:-59688787 Msa0338960:CDS
GGTGTCCAGTTCCACTTGCG+TGG 0.568141 2_4:+59688998 None:intergenic
GAGTTAACTCTAGGTTGAGT+GGG 0.569102 2_4:-59690852 Msa0338960:CDS
CTCTTTACACAACCAAAGAA+AGG 0.572404 2_4:-59691667 Msa0338960:intron
CTCGTCAAAGGACTTGGCGT+TGG 0.572857 2_4:+59691901 None:intergenic
AAGAGACCAGAGTTAACTCT+AGG 0.573035 2_4:-59690861 Msa0338960:CDS
AAGAGACCACAGTTGACTCT+AGG 0.576346 2_4:-59691179 Msa0338960:CDS
TCAACTGTCAATCTTCAAGT+CGG 0.577543 2_4:-59685459 Msa0338960:CDS
TTACGCGACTCCTCGGCTGT+AGG 0.579110 2_4:+59689346 None:intergenic
GGGACCGACCATGTGAATGA+AGG 0.579969 2_4:-59685052 Msa0338960:CDS
ACTAGTGTGGTGCCCAGAAG+AGG 0.581145 2_4:-59690757 Msa0338960:CDS
ATTTAGGTCGCCGGATGAAG+AGG 0.582509 2_4:-59685191 Msa0338960:CDS
TGCACATTAGATATCTGTAC+AGG 0.583301 2_4:+59688750 None:intergenic
TGTCCTTATTTCAATCCGGA+AGG 0.583393 2_4:-59688640 Msa0338960:intron
TTACCCAATGGAATCAAGGC+AGG 0.584558 2_4:-59684956 Msa0338960:CDS
ACTCTAGGACCGACGAGCCA+AGG 0.584887 2_4:-59691005 Msa0338960:CDS
TTTGGAATAATCTGTTGGTG+GGG 0.584951 2_4:-59685156 Msa0338960:CDS
CCCAATGTATCGGATACAGC+TGG 0.586323 2_4:-59692066 Msa0338960:CDS
ACACCCACCTCAGTTGCACA+TGG 0.586554 2_4:+59689322 None:intergenic
AAGAAACCAGAGTTGACTCT+AGG 0.587558 2_4:-59691020 Msa0338960:CDS
AACTGTCAATCTTCAAGTCG+GGG 0.588085 2_4:-59685457 Msa0338960:CDS
CAGCCTTCATCAAAATCTGT+AGG 0.595326 2_4:-59684986 Msa0338960:CDS
GATAAGAGCGACCACGCAAG+TGG 0.596892 2_4:-59689009 Msa0338960:CDS
AGAGTTAACTCTAGGTTGAG+TGG 0.600517 2_4:-59690853 Msa0338960:CDS
GACGAAGAACAATTCAGGGT+CGG 0.601333 2_4:+59693584 None:intergenic
GTTCATCTCAGCGGAGCCGG+AGG 0.603225 2_4:-59685105 Msa0338960:CDS
ACATGGGTTACGCGACTCCT+CGG 0.605052 2_4:+59689339 None:intergenic
AACCAGAAGAAAGTCTGTAA+GGG 0.606060 2_4:-59691941 Msa0338960:CDS
TCGTTCTAGTCAAAAGGCCA+AGG 0.606585 2_4:-59692151 Msa0338960:CDS
AAGTCTGAGCAAGTAGAGAA+GGG 0.606860 2_4:-59691982 Msa0338960:CDS
GTAGGTGAAAAGTTACCCAA+TGG 0.607636 2_4:-59684968 Msa0338960:CDS
GACTTGGTCAGTAACAATGC+TGG 0.607747 2_4:-59690664 Msa0338960:CDS
AGCAAAGGTGACAATAGTAG+TGG 0.610934 2_4:-59691135 Msa0338960:CDS
TGAAATAAGGACATCACGAA+TGG 0.611007 2_4:+59688650 None:intergenic
CTCTAGGCAAGGTAAGACCC+TGG 0.611413 2_4:-59685485 Msa0338960:CDS
ATGAAGAAAATAATAATGGG+AGG 0.613173 2_4:-59692128 Msa0338960:CDS
TGTATTCGATGATGATGACT+TGG 0.613466 2_4:-59690680 Msa0338960:CDS
ACACAACGTGGAAAGTTCCC+AGG 0.615041 2_4:-59691728 Msa0338960:CDS
GATAAAAGGTGCCAAAGCAA+AGG 0.615375 2_4:-59691150 Msa0338960:CDS
AATGTTGGAATAAAAGCAAG+TGG 0.615384 2_4:-59687022 Msa0338960:CDS
GCTTTGATTCTCTCTAGGCA+AGG 0.617680 2_4:-59685496 Msa0338960:CDS
CAGGAAGGTGACAACAGTAG+TGG 0.619959 2_4:-59691294 Msa0338960:CDS
TGAAGAAAATAATAATGGGA+GGG 0.620771 2_4:-59692127 Msa0338960:CDS
TGAATCTGACAATCACTGCA+TGG 0.620839 2_4:+59693535 None:intergenic
AGATTGACAGTTGATGTCCA+GGG 0.621974 2_4:+59685468 None:intergenic
GCCAAAGATTGATAGTGTTG+GGG 0.622298 2_4:-59688673 Msa0338960:CDS
AATTCCTGCTCACCAAACAA+AGG 0.624272 2_4:+59685211 None:intergenic
GTCGGTCCTAGAGTCAACTC+TGG 0.624776 2_4:+59691014 None:intergenic
TCTCCTTTAGATAATGAGGA+AGG 0.625074 2_4:+59690571 None:intergenic
CAAACAAAGGAGAATTTGCA+AGG 0.628158 2_4:+59685224 None:intergenic
AGACTTCTGAGTACTTGAAG+AGG 0.628177 2_4:+59691999 None:intergenic
GAAGAACGGTACACTGCCAT+CGG 0.629096 2_4:-59691217 Msa0338960:CDS
AACAAAGAAGTATCGAAGAA+CGG 0.629825 2_4:-59691231 Msa0338960:CDS
AATCACTGCATGGATTGTAA+CGG 0.630967 2_4:+59693545 None:intergenic
TCAAAGTGTTGTTCATCCGA+AGG 0.632497 2_4:-59688841 Msa0338960:CDS
CACACTAGTCTCATAAGTTG+GGG 0.632819 2_4:+59690771 None:intergenic
TCAGGACATAGATGTCATTG+AGG 0.637473 2_4:-59689049 Msa0338960:intron
ATTAGCAAGCCAAATCAGGA+AGG 0.637512 2_4:-59691309 Msa0338960:CDS
TAATATTATCAGAATGCCCA+AGG 0.640296 2_4:+59691328 None:intergenic
AAAGAGAGACCGATACATCA+GGG 0.640898 2_4:+59691684 None:intergenic
ATCAAGTGTCAACTTCTGAA+GGG 0.640928 2_4:+59685579 None:intergenic
ACAGCCTGATTGCTGCGAAG+AGG 0.646179 2_4:-59690734 Msa0338960:CDS
GCGTAACCCATGTGCAACTG+AGG 0.653540 2_4:-59689329 Msa0338960:intron
AGTCATACTCTCTTGATGTG+GGG 0.655516 2_4:-59685430 Msa0338960:CDS
CACCCACCTCAGTTGCACAT+GGG 0.661317 2_4:+59689323 None:intergenic
TTATTGAAAGTCCAGCAACA+TGG 0.661716 2_4:-59685256 Msa0338960:CDS
TATTGCAAACAGATGCAAGT+CGG 0.667548 2_4:-59688802 Msa0338960:CDS
TTAGATGGTATAAATGAACC+AGG 0.668025 2_4:+59690796 None:intergenic
TGAAAATGAGGAACACAACG+TGG 0.669394 2_4:-59691740 Msa0338960:CDS
ACTCAACCTAGAGTTAACTC+TGG 0.670792 2_4:+59690855 None:intergenic
TTTCAATGGAAGTACTCATG+TGG 0.671125 2_4:-59685127 Msa0338960:CDS
TTGAAAGTCCAGCAACATGG+AGG 0.688038 2_4:-59685253 Msa0338960:CDS
TAAGAGAAAGGCAATCACTG+TGG 0.699964 2_4:-59690611 Msa0338960:CDS
ACTCATGTGGTTCATCTCAG+CGG 0.702729 2_4:-59685114 Msa0338960:CDS
GGGATTTCAGGGTAGCACTG+TGG 0.703298 2_4:-59688895 Msa0338960:intron
GCCAATCCTAGAGTCAACTG+TGG 0.706585 2_4:+59691173 None:intergenic
GCTCTCCCTTCAAAACTAGG+TGG 0.706794 2_4:-59690526 Msa0338960:CDS
CCCAACTTATGAGACTAGTG+TGG 0.722871 2_4:-59690770 Msa0338960:CDS
GAGAGACCGATACATCAGGG+CGG 0.804578 2_4:+59691687 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTTTATTTATTTTTATG+AGG - chr2_4:59688152-59688171 Msa0338960:intron 10.0%
!! AAAAAAAAAAAAAAATCAGA+CGG + chr2_4:59688214-59688233 None:intergenic 10.0%
!! CATATAAAAATGTAAATATA+TGG - chr2_4:59689052-59689071 Msa0338960:intron 10.0%
!!! TAACAAATTTTAAGTAAATT+GGG + chr2_4:59689302-59689321 None:intergenic 10.0%
!!! TATTTTGATTTTAAAATTTG+GGG - chr2_4:59691109-59691128 Msa0338960:CDS 10.0%
!!! AAATACTGATTTTTTTTTTT+TGG + chr2_4:59691152-59691171 None:intergenic 10.0%
!!! TTGTTTTATTTTTTGAAAAT+CGG + chr2_4:59692446-59692465 None:intergenic 10.0%
!!! TTTTTTTTTTTTAATTGTCA+TGG - chr2_4:59692529-59692548 Msa0338960:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689271-59689290 None:intergenic 100.0%
!!! ATTGCATGATATTATTTTTT+AGG - chr2_4:59685360-59685379 Msa0338960:CDS 15.0%
!!! TTGCATGATATTATTTTTTA+GGG - chr2_4:59685361-59685380 Msa0338960:CDS 15.0%
!! ACACATTATATTAAAATTCA+AGG + chr2_4:59685600-59685619 None:intergenic 15.0%
!!! AAATTTTTTATTTAAGCCAA+TGG - chr2_4:59686364-59686383 Msa0338960:intron 15.0%
!!! TTATTTATTTTTATGAGGTT+TGG - chr2_4:59688157-59688176 Msa0338960:intron 15.0%
!! CTATTTAATATTCAAATTCA+TGG - chr2_4:59688280-59688299 Msa0338960:intron 15.0%
!! TGAGTAAAAAATAATCAAAA+AGG + chr2_4:59688382-59688401 None:intergenic 15.0%
!! AATCAAATATAGTATTAACA+AGG + chr2_4:59688608-59688627 None:intergenic 15.0%
!!! AACAAATTTTAAGTAAATTG+GGG + chr2_4:59689301-59689320 None:intergenic 15.0%
!!! GTAACAAATTTTAAGTAAAT+TGG + chr2_4:59689303-59689322 None:intergenic 15.0%
!!! TACTTAAAATTTGTTACAAA+AGG - chr2_4:59689306-59689325 Msa0338960:intron 15.0%
!!! ACTTAAAATTTGTTACAAAA+GGG - chr2_4:59689307-59689326 Msa0338960:intron 15.0%
!!! ATTTTTTTTTTTTGGCAAAA+CGG + chr2_4:59691144-59691163 None:intergenic 15.0%
!! AAAAATGTTAAATCAAAACA+TGG + chr2_4:59691215-59691234 None:intergenic 15.0%
!! AGTTGAGAAAAAATAAATTA+AGG - chr2_4:59691581-59691600 Msa0338960:intron 15.0%
!! GTTGAGAAAAAATAAATTAA+GGG - chr2_4:59691582-59691601 Msa0338960:intron 15.0%
!!! AAATAGTTTTTTTTAAGTTG+TGG - chr2_4:59692332-59692351 Msa0338960:intron 15.0%
!!! TGTTATTTTCATTGAGAAAA+GGG + chr2_4:59684918-59684937 None:intergenic 20.0%
!! AATGTATGTAGAAAAATTGA+CGG + chr2_4:59685233-59685252 None:intergenic 20.0%
!!! ATTATGTAAAATTGAGTTGA+AGG - chr2_4:59685699-59685718 Msa0338960:CDS 20.0%
!!! AATCAGAAGCTATAATTTTT+AGG - chr2_4:59685774-59685793 Msa0338960:CDS 20.0%
!! GGTTCAAATAAAATCAATTA+TGG - chr2_4:59685795-59685814 Msa0338960:CDS 20.0%
!! TCAAATAAAATCAATTATGG+AGG - chr2_4:59685798-59685817 Msa0338960:CDS 20.0%
!!! AGAATTGATTTTAACATGTT+TGG + chr2_4:59685851-59685870 None:intergenic 20.0%
!! CAAATAATAAATTCTAGGTT+TGG + chr2_4:59685913-59685932 None:intergenic 20.0%
!! AACAGCAAATAATAAATTCT+AGG + chr2_4:59685918-59685937 None:intergenic 20.0%
!!! GGTAAAAGAAGATTTTAATT+TGG + chr2_4:59686101-59686120 None:intergenic 20.0%
!!! ATTATTATTTTCTTCATCCT+TGG + chr2_4:59686417-59686436 None:intergenic 20.0%
!! AAGGATGAAGAAAATAATAA+TGG - chr2_4:59686416-59686435 Msa0338960:intron 20.0%
!! AGGATGAAGAAAATAATAAT+GGG - chr2_4:59686417-59686436 Msa0338960:intron 20.0%
!! ATTTGTATTACATTTGGATT+TGG + chr2_4:59686982-59687001 None:intergenic 20.0%
!! CATATCAAATTTATTAGAAG+TGG - chr2_4:59687113-59687132 Msa0338960:CDS 20.0%
!! AAAATCAAGCAATCAAAAAA+TGG + chr2_4:59687193-59687212 None:intergenic 20.0%
!!! GAATTCATTGTTCAATTTTT+TGG - chr2_4:59688120-59688139 Msa0338960:intron 20.0%
!! AAATAATCAAAAAGGACAAA+AGG + chr2_4:59688374-59688393 None:intergenic 20.0%
!!! TACAAAAATGTTTTTCAAGT+TGG - chr2_4:59688960-59688979 Msa0338960:intron 20.0%
!!! TTTTTCAAGTTGGATAATTT+TGG - chr2_4:59688970-59688989 Msa0338960:intron 20.0%
!!! ACAAATTTTAAGTAAATTGG+GGG + chr2_4:59689300-59689319 None:intergenic 20.0%
!!! TGTTGCTAATTTTGATTTAA+GGG + chr2_4:59689409-59689428 None:intergenic 20.0%
!!! ATGTTGCTAATTTTGATTTA+AGG + chr2_4:59689410-59689429 None:intergenic 20.0%
!!! ATTTCTTTGTATCTTTTCAT+TGG - chr2_4:59689474-59689493 Msa0338960:intron 20.0%
!! ATTTGGTTAGTACAATATAT+TGG - chr2_4:59690023-59690042 Msa0338960:intron 20.0%
!! TCCTTTATTATTAGATTAGA+TGG - chr2_4:59690053-59690072 Msa0338960:intron 20.0%
!! ACCATCTAATCTAATAATAA+AGG + chr2_4:59690057-59690076 None:intergenic 20.0%
!!! ATTCCTCTAAAAAATATACA+GGG + chr2_4:59690609-59690628 None:intergenic 20.0%
!!! AATTCCTCTAAAAAATATAC+AGG + chr2_4:59690610-59690629 None:intergenic 20.0%
!!! TATTTTGGTATAGAGATTAT+GGG + chr2_4:59690978-59690997 None:intergenic 20.0%
!!! ATATTTTGGTATAGAGATTA+TGG + chr2_4:59690979-59690998 None:intergenic 20.0%
!!! TTTTTTTTTTTTGGCAAAAC+GGG + chr2_4:59691143-59691162 None:intergenic 20.0%
!!! TTTCTCATTTTAATTGTTGA+TGG - chr2_4:59691169-59691188 Msa0338960:CDS 20.0%
!!! TTCTCATTTTAATTGTTGAT+GGG - chr2_4:59691170-59691189 Msa0338960:CDS 20.0%
!!! ATGTGTTTTAATTAGTTGTT+TGG - chr2_4:59691239-59691258 Msa0338960:CDS 20.0%
!! ACAAATCAAAGATAATAGAT+GGG + chr2_4:59692412-59692431 None:intergenic 20.0%
!! AACAAATCAAAGATAATAGA+TGG + chr2_4:59692413-59692432 None:intergenic 20.0%
!!! AAGAATTGATAATTGTCTTA+CGG - chr2_4:59692784-59692803 Msa0338960:intron 20.0%
!!! GTGTTATTTTCATTGAGAAA+AGG + chr2_4:59684919-59684938 None:intergenic 25.0%
!!! ATTTCTTCTATCACTGATTT+AGG - chr2_4:59685153-59685172 Msa0338960:CDS 25.0%
!!! TTTCTTCTATCACTGATTTA+GGG - chr2_4:59685154-59685173 Msa0338960:CDS 25.0%
! TAGCAATCACATAAACAAAA+CGG + chr2_4:59685258-59685277 None:intergenic 25.0%
!!! GTTAAATATGTTTTTAGTGC+CGG - chr2_4:59685383-59685402 Msa0338960:CDS 25.0%
! ACGAAATTATAGATATTCAC+CGG + chr2_4:59685405-59685424 None:intergenic 25.0%
!! TAATTTGCACGACTAAAAAA+TGG + chr2_4:59685443-59685462 None:intergenic 25.0%
!! GTTTTTACTTTATGTATGCT+TGG - chr2_4:59685641-59685660 Msa0338960:CDS 25.0%
! TCAGTGAGAAAATTTAGTTA+TGG - chr2_4:59685668-59685687 Msa0338960:CDS 25.0%
! CAGTGAGAAAATTTAGTTAT+GGG - chr2_4:59685669-59685688 Msa0338960:CDS 25.0%
! TTTGAAGGATTCATGTAATT+AGG - chr2_4:59685946-59685965 Msa0338960:intron 25.0%
! ATGGAGATTGATATATTCTT+TGG - chr2_4:59685986-59686005 Msa0338960:intron 25.0%
!! TATTTTCTCAAGTTACTCAA+GGG + chr2_4:59686068-59686087 None:intergenic 25.0%
!! ATATTTTCTCAAGTTACTCA+AGG + chr2_4:59686069-59686088 None:intergenic 25.0%
! AGTAACTTGAGAAAATATTG+AGG - chr2_4:59686071-59686090 Msa0338960:intron 25.0%
!! TTAAAATCTTCTTTTACCAG+TGG - chr2_4:59686103-59686122 Msa0338960:intron 25.0%
! ATAATAACAATATTTGCCAC+TGG + chr2_4:59686122-59686141 None:intergenic 25.0%
!! ATGAAGAAAATAATAATGGG+AGG - chr2_4:59686420-59686439 Msa0338960:intron 25.0%
!! TGAAGAAAATAATAATGGGA+GGG - chr2_4:59686421-59686440 Msa0338960:intron 25.0%
! ACAACGATTTGTATTACATT+TGG + chr2_4:59686988-59687007 None:intergenic 25.0%
!! ACAAATCGTTGTTAATTTGA+TGG - chr2_4:59686996-59687015 Msa0338960:CDS 25.0%
! TTTAGATAACTCATCAATCT+TGG + chr2_4:59687600-59687619 None:intergenic 25.0%
! AAGATTGATGAGTTATCTAA+AGG - chr2_4:59687599-59687618 Msa0338960:intron 25.0%
! AATAAAGAAGTCTCAAAGAA+TGG - chr2_4:59687635-59687654 Msa0338960:intron 25.0%
!!! ATAAGGTACTTGTTGTTAAA+TGG - chr2_4:59688067-59688086 Msa0338960:intron 25.0%
!! TTTTACTCAACATGTTTGTT+TGG - chr2_4:59688393-59688412 Msa0338960:intron 25.0%
! TTGAGAAAGAGAAAAAAAAG+AGG - chr2_4:59688634-59688653 Msa0338960:intron 25.0%
! ACATAGGTAATTTAAACGAA+TGG - chr2_4:59688663-59688682 Msa0338960:CDS 25.0%
! AAACTCTAATCCTTACTTAT+AGG - chr2_4:59688753-59688772 Msa0338960:CDS 25.0%
! AACTCTAATCCTTACTTATA+GGG - chr2_4:59688754-59688773 Msa0338960:CDS 25.0%
!! CTTGATTTCCTTGTTTATTT+AGG + chr2_4:59688795-59688814 None:intergenic 25.0%
! CCTTGAAAAGTTACAAAAAT+TGG + chr2_4:59689006-59689025 None:intergenic 25.0%
!! CCAATTTTTGTAACTTTTCA+AGG - chr2_4:59689003-59689022 Msa0338960:CDS 25.0%
!!! AAATTTTAAGTAAATTGGGG+GGG + chr2_4:59689298-59689317 None:intergenic 25.0%
!!! CAAATTTTAAGTAAATTGGG+GGG + chr2_4:59689299-59689318 None:intergenic 25.0%
!!! CATTTATTTCTGTTCATTTG+TGG - chr2_4:59689441-59689460 Msa0338960:intron 25.0%
! ATCAAAAGAAACAAACCTTA+AGG + chr2_4:59689574-59689593 None:intergenic 25.0%
!!! GTTTGTTTCTTTTGATGTAT+AGG - chr2_4:59689578-59689597 Msa0338960:intron 25.0%
!! TTTCTTTTGATGTATAGGTT+TGG - chr2_4:59689583-59689602 Msa0338960:intron 25.0%
! AAATCCCAGTAGAATTAAAT+AGG + chr2_4:59689640-59689659 None:intergenic 25.0%
! TATATTGTACTAACCAAATG+CGG + chr2_4:59690022-59690041 None:intergenic 25.0%
! AAGTTGGATAAAGTCTATTT+AGG + chr2_4:59690243-59690262 None:intergenic 25.0%
! ACGTTGAGTTTAGATAAAAT+CGG - chr2_4:59690303-59690322 Msa0338960:intron 25.0%
! ACAAATAAAATCTCACTACT+AGG + chr2_4:59690422-59690441 None:intergenic 25.0%
! AGTTTGATTAAGGATGATTT+CGG + chr2_4:59690885-59690904 None:intergenic 25.0%
!!! GATTTTTCAGAGTTTGATTA+AGG + chr2_4:59690895-59690914 None:intergenic 25.0%
! TATATAAAGATATCACACTC+AGG + chr2_4:59691006-59691025 None:intergenic 25.0%
! GAGTGTGATATCTTTATATA+TGG - chr2_4:59691006-59691025 Msa0338960:CDS 25.0%
!!! TTTTTTTTTTTGGCAAAACG+GGG + chr2_4:59691142-59691161 None:intergenic 25.0%
! CTAAAAAGTAGAGAAATACT+CGG + chr2_4:59691293-59691312 None:intergenic 25.0%
!!! CTACTTTTTAGTAGTTGATA+TGG - chr2_4:59691302-59691321 Msa0338960:CDS 25.0%
! AGGGATTCTTCAATAATATA+GGG + chr2_4:59691433-59691452 None:intergenic 25.0%
!! TATTTCCATATATTGACTAC+AGG - chr2_4:59691641-59691660 Msa0338960:intron 25.0%
!! AAAACACAATAGTGTTTTTC+AGG + chr2_4:59691696-59691715 None:intergenic 25.0%
!! CTATTGTGTTTTTCTATTAC+CGG - chr2_4:59691704-59691723 Msa0338960:CDS 25.0%
!! TATTGTGTTTTTCTATTACC+GGG - chr2_4:59691705-59691724 Msa0338960:CDS 25.0%
! ATGATTAGATGTCAATGATT+TGG - chr2_4:59691919-59691938 Msa0338960:CDS 25.0%
!!! AGTTTTTTTTAAGTTGTGGA+AGG - chr2_4:59692336-59692355 Msa0338960:intron 25.0%
!!! GTTTTTTTTAAGTTGTGGAA+GGG - chr2_4:59692337-59692356 Msa0338960:intron 25.0%
!! TTGTTTCTCAAGAAAATCAA+GGG + chr2_4:59692375-59692394 None:intergenic 25.0%
!! TTTGTTTCTCAAGAAAATCA+AGG + chr2_4:59692376-59692395 None:intergenic 25.0%
! CAAATCAAAGATAATAGATG+GGG + chr2_4:59692411-59692430 None:intergenic 25.0%
!!! TATTTTTTGAAAATCGGCAT+GGG + chr2_4:59692440-59692459 None:intergenic 25.0%
!!! TTATTTTTTGAAAATCGGCA+TGG + chr2_4:59692441-59692460 None:intergenic 25.0%
! ACAATGAGAAAATTAGAAAG+TGG + chr2_4:59692555-59692574 None:intergenic 25.0%
!! TTCTAATTTTCTCATTGTAC+TGG - chr2_4:59692557-59692576 Msa0338960:intron 25.0%
!! GACTTCAATAGTAGATATTT+TGG - chr2_4:59692721-59692740 Msa0338960:intron 25.0%
!!! ATTGATGACAATTTTATGCT+AGG + chr2_4:59692896-59692915 None:intergenic 25.0%
! TTATTATATTTGACAGTGAC+TGG - chr2_4:59692924-59692943 Msa0338960:intron 25.0%
!! AGTTCAGCCTTTTAATAATT+TGG - chr2_4:59693468-59693487 Msa0338960:intron 25.0%
ATTTCGAAGCAAAACGAATA+CGG + chr2_4:59685186-59685205 None:intergenic 30.0%
!!! TACACCTCTAGAATCAATTT+TGG - chr2_4:59685870-59685889 Msa0338960:intron 30.0%
AAGGATTCATGTAATTAGGT+TGG - chr2_4:59685950-59685969 Msa0338960:intron 30.0%
!!! GGTTGGAGTTTTTTTTGTTA+TGG - chr2_4:59685967-59685986 Msa0338960:intron 30.0%
! ATTTTCTCAAGTTACTCAAG+GGG + chr2_4:59686067-59686086 None:intergenic 30.0%
! ACTAGGAATCATTCTTTTTC+TGG - chr2_4:59686680-59686699 Msa0338960:intron 30.0%
! CATTTTCTTTCTTTTCACCT+GGG + chr2_4:59686840-59686859 None:intergenic 30.0%
! TCATTTTCTTTCTTTTCACC+TGG + chr2_4:59686841-59686860 None:intergenic 30.0%
!!! TGGACATTTTTTTTCGAGTA+AGG - chr2_4:59687133-59687152 Msa0338960:CDS 30.0%
TAATATTATCAGAATGCCCA+AGG + chr2_4:59687223-59687242 None:intergenic 30.0%
TAATATTAGCAAGCCAAATC+AGG - chr2_4:59687235-59687254 Msa0338960:intron 30.0%
TTTAGATAACTCGTCAATCT+TGG + chr2_4:59687282-59687301 None:intergenic 30.0%
AAGATTGACGAGTTATCTAA+AGG - chr2_4:59687281-59687300 Msa0338960:intron 30.0%
!! AACAAAGAAGTATCGAAGAA+CGG - chr2_4:59687317-59687336 Msa0338960:intron 30.0%
TTTAGACAACTCATCAATCT+TGG + chr2_4:59687441-59687460 None:intergenic 30.0%
AAGATTGATGAGTTGTCTAA+AGG - chr2_4:59687440-59687459 Msa0338960:intron 30.0%
! TTTTCTGCTAAATCTGTCAT+AGG + chr2_4:59687722-59687741 None:intergenic 30.0%
TTAGATGGTATAAATGAACC+AGG + chr2_4:59687755-59687774 None:intergenic 30.0%
TGTTGTTAAATGGCAGTAAA+TGG - chr2_4:59688077-59688096 Msa0338960:intron 30.0%
TAATCAAAAAGGACAAAAGG+TGG + chr2_4:59688371-59688390 None:intergenic 30.0%
! AAAAAAGAGGAAGCATACAT+AGG - chr2_4:59688647-59688666 Msa0338960:CDS 30.0%
! TTGATAATAGCATGATACGA+AGG - chr2_4:59688727-59688746 Msa0338960:CDS 30.0%
TCTATCTATCCCTATAAGTA+AGG + chr2_4:59688766-59688785 None:intergenic 30.0%
CACACATATTATAATGAACC+AGG - chr2_4:59688901-59688920 Msa0338960:intron 30.0%
ATATAGTAAATGAGTAGCTC+TGG + chr2_4:59689029-59689048 None:intergenic 30.0%
TGAACAGATCAACAGATAAA+GGG + chr2_4:59689110-59689129 None:intergenic 30.0%
ATGAACAGATCAACAGATAA+AGG + chr2_4:59689111-59689130 None:intergenic 30.0%
TTATCTGTTGATCTGTTCAT+TGG - chr2_4:59689111-59689130 Msa0338960:intron 30.0%
!! AATTTTAAGTAAATTGGGGG+GGG + chr2_4:59689297-59689316 None:intergenic 30.0%
!! ACAAAACACATTTGAGTTGA+GGG + chr2_4:59689615-59689634 None:intergenic 30.0%
!! AACAAAACACATTTGAGTTG+AGG + chr2_4:59689616-59689635 None:intergenic 30.0%
TGTTGCCTATTTAATTCTAC+TGG - chr2_4:59689632-59689651 Msa0338960:intron 30.0%
GTTGCCTATTTAATTCTACT+GGG - chr2_4:59689633-59689652 Msa0338960:intron 30.0%
TTTAATTCTACTGGGATTTC+AGG - chr2_4:59689641-59689660 Msa0338960:intron 30.0%
TTAATTCTACTGGGATTTCA+GGG - chr2_4:59689642-59689661 Msa0338960:intron 30.0%
AATATTCATGCTCTTCTTGA+TGG - chr2_4:59689684-59689703 Msa0338960:intron 30.0%
!! CTATAAGTTGGTTGAGTATT+GGG - chr2_4:59689773-59689792 Msa0338960:intron 30.0%
!!! TTCGCTCTAGTTTTTAGTTA+GGG + chr2_4:59690574-59690593 None:intergenic 30.0%
!!! ATTCGCTCTAGTTTTTAGTT+AGG + chr2_4:59690575-59690594 None:intergenic 30.0%
ACTAAAAACTAGAGCGAATT+TGG - chr2_4:59690576-59690595 Msa0338960:CDS 30.0%
!!! CAACCCTGTATATTTTTTAG+AGG - chr2_4:59690603-59690622 Msa0338960:CDS 30.0%
ATCTACAACGAATGAAAATC+AGG - chr2_4:59690712-59690731 Msa0338960:CDS 30.0%
AAAAAACAGCACTACTTACT+TGG - chr2_4:59690840-59690859 Msa0338960:CDS 30.0%
TCAAAATATACGGTAAGCAA+TGG + chr2_4:59691097-59691116 None:intergenic 30.0%
GGAGTTAATTGAAAGAGTAA+AGG + chr2_4:59691332-59691351 None:intergenic 30.0%
CAGGGATTCTTCAATAATAT+AGG + chr2_4:59691434-59691453 None:intergenic 30.0%
AATGTTGGAATAAAAGCAAG+TGG - chr2_4:59691526-59691545 Msa0338960:intron 30.0%
AGATACCTGTAGTCAATATA+TGG + chr2_4:59691649-59691668 None:intergenic 30.0%
TCATAGAACCATAAAATCGA+AGG + chr2_4:59691778-59691797 None:intergenic 30.0%
!! TTCGATTTTATGGTTCTATG+AGG - chr2_4:59691777-59691796 Msa0338960:CDS 30.0%
! TGATCTAAGATAGAGCATTA+TGG - chr2_4:59691951-59691970 Msa0338960:CDS 30.0%
! AAGACTCTTTAAGAGTAATC+AGG - chr2_4:59692161-59692180 Msa0338960:CDS 30.0%
!! TTTCGATTCTCTTTGTTGTT+TGG - chr2_4:59692196-59692215 Msa0338960:five_prime_UTR 30.0%
!! TAACTGTTTTGAGTAGAGAA+GGG - chr2_4:59692236-59692255 Msa0338960:intron 30.0%
AAACTATTTCCACTTCTTGA+TGG + chr2_4:59692321-59692340 None:intergenic 30.0%
ACACAACATAAAAGAAAGCA+GGG + chr2_4:59692619-59692638 None:intergenic 30.0%
TTTCTTATAACTCAATGACC+TGG + chr2_4:59692663-59692682 None:intergenic 30.0%
TTATTGAATTTGCAGCCAAT+TGG - chr2_4:59692686-59692705 Msa0338960:intron 30.0%
! CAAGCGATTTTTCTTTTTGA+TGG - chr2_4:59692853-59692872 Msa0338960:intron 30.0%
! ATGACAATTTTATGCTAGGA+TGG + chr2_4:59692892-59692911 None:intergenic 30.0%
AGGGATCTTATATCATTCAT+CGG + chr2_4:59692953-59692972 None:intergenic 30.0%
CAGTGAAAGGTGAATATAAA+CGG + chr2_4:59693021-59693040 None:intergenic 30.0%
AGATTATTCCAAAACGTTTG+TGG + chr2_4:59693385-59693404 None:intergenic 30.0%
!!! AACGTTTTGGAATAATCTGT+TGG - chr2_4:59693387-59693406 Msa0338960:intron 30.0%
!!! TTTTGGAATAATCTGTTGGT+GGG - chr2_4:59693391-59693410 Msa0338960:intron 30.0%
! CTTTTAATAATTTGGCAGGT+GGG - chr2_4:59693476-59693495 Msa0338960:intron 30.0%
TGGTATCAGAGAGTTACTTA+TGG + chr2_4:59684941-59684960 None:intergenic 35.0%
! AATCACTGCATGGATTGTAA+CGG + chr2_4:59685006-59685025 None:intergenic 35.0%
TTACGCTTTCTCTCTCTATA+AGG - chr2_4:59685116-59685135 Msa0338960:CDS 35.0%
!!! GTAGTTTTAGTCTCTTCCTA+CGG - chr2_4:59685471-59685490 Msa0338960:CDS 35.0%
!!! ACACGTGGTTTTGTATTTTG+CGG - chr2_4:59685505-59685524 Msa0338960:CDS 35.0%
! AGAGCCAAAATTGATTCTAG+AGG + chr2_4:59685877-59685896 None:intergenic 35.0%
!! TCTAGGTTTGGTTCAACTTT+TGG + chr2_4:59685901-59685920 None:intergenic 35.0%
!! TGCTGTTGATTTGTGTTTGA+AGG - chr2_4:59685931-59685950 Msa0338960:intron 35.0%
AGTACACATTCCTTTGTAGT+TGG - chr2_4:59686218-59686237 Msa0338960:intron 35.0%
! TTCCTTTGTAGTTGGTACTA+TGG - chr2_4:59686226-59686245 Msa0338960:intron 35.0%
GATATCTGCGTATTGTATGT+TGG - chr2_4:59686288-59686307 Msa0338960:intron 35.0%
!! GAACGAGTACTTTTTACCAT+TGG + chr2_4:59686383-59686402 None:intergenic 35.0%
AAGTACTCGTTCTAGTCAAA+AGG - chr2_4:59686391-59686410 Msa0338960:intron 35.0%
! AAAAGCACATCCCAATGTAT+CGG - chr2_4:59686472-59686491 Msa0338960:intron 35.0%
GAGGTTGCAATTATCTTTGA+TGG + chr2_4:59686533-59686552 None:intergenic 35.0%
AAACCAGAAGAAAGTCTGTA+AGG - chr2_4:59686606-59686625 Msa0338960:intron 35.0%
AACCAGAAGAAAGTCTGTAA+GGG - chr2_4:59686607-59686626 Msa0338960:intron 35.0%
! CTCATTTTCATTCACTTCCT+TGG + chr2_4:59686798-59686817 None:intergenic 35.0%
CAAGGAAGTGAATGAAAATG+AGG - chr2_4:59686796-59686815 Msa0338960:intron 35.0%
CTCTTTACACAACCAAAGAA+AGG - chr2_4:59686881-59686900 Msa0338960:intron 35.0%
!! ACAACCAAAGAAAGGTACTT+TGG - chr2_4:59686889-59686908 Msa0338960:intron 35.0%
! AACACCAAAGTACCTTTCTT+TGG + chr2_4:59686896-59686915 None:intergenic 35.0%
! CTTGATTTTCAGATTGCCTT+GGG - chr2_4:59687204-59687223 Msa0338960:intron 35.0%
TACTATTGTCACCTTTGCTT+TGG + chr2_4:59687412-59687431 None:intergenic 35.0%
AATGAAGAAGTCTCGAAGAA+TGG - chr2_4:59687476-59687495 Msa0338960:intron 35.0%
ACATTACGAACATTAGTGTC+AGG - chr2_4:59687839-59687858 Msa0338960:intron 35.0%
! TGTATTCGATGATGATGACT+TGG - chr2_4:59687868-59687887 Msa0338960:intron 35.0%
! ATTAGCACCTTCTAAGAGAA+AGG - chr2_4:59687925-59687944 Msa0338960:intron 35.0%
GTTCCTTCCTCATTATCTAA+AGG - chr2_4:59687974-59687993 Msa0338960:intron 35.0%
TCTCCTTTAGATAATGAGGA+AGG + chr2_4:59687980-59687999 None:intergenic 35.0%
TCTGTCTCCTTTAGATAATG+AGG + chr2_4:59687984-59688003 None:intergenic 35.0%
AGTCATGTTCCAAACGAATA+AGG - chr2_4:59688050-59688069 Msa0338960:intron 35.0%
CAACAAGTACCTTATTCGTT+TGG + chr2_4:59688062-59688081 None:intergenic 35.0%
AATCAGACGGTTTGATATAG+AGG + chr2_4:59688201-59688220 None:intergenic 35.0%
ACTCAACATGTTTGTTTGGA+TGG - chr2_4:59688397-59688416 Msa0338960:intron 35.0%
CTTATAGGGATAGATAGACT+TGG - chr2_4:59688768-59688787 Msa0338960:CDS 35.0%
! GACTTGGTCCTAAATAAACA+AGG - chr2_4:59688784-59688803 Msa0338960:CDS 35.0%
! TCCTTAAAGTTGACTCAGTA+TGG - chr2_4:59688855-59688874 Msa0338960:CDS 35.0%
ACCATACTGAGTCAACTTTA+AGG + chr2_4:59688859-59688878 None:intergenic 35.0%
! AAAGTTGACTCAGTATGGTT+AGG - chr2_4:59688860-59688879 Msa0338960:CDS 35.0%
! TATGGGCGAAATATTTTGCT+AGG - chr2_4:59689070-59689089 Msa0338960:intron 35.0%
! TGATTGGTTCTTTACTTTGC+AGG - chr2_4:59689167-59689186 Msa0338960:intron 35.0%
!! ATTTTAAGTAAATTGGGGGG+GGG + chr2_4:59689296-59689315 None:intergenic 35.0%
ATGCACTAATGATAGATTGC+TGG - chr2_4:59689336-59689355 Msa0338960:CDS 35.0%
ATAATTAATCAACAGCCCTC+TGG - chr2_4:59689362-59689381 Msa0338960:CDS 35.0%
!!! TGTATCTTTTCATTGGCTTC+AGG - chr2_4:59689481-59689500 Msa0338960:intron 35.0%
TATTGCAAACAGATGCAAGT+CGG - chr2_4:59689746-59689765 Msa0338960:intron 35.0%
CCAATACTCAACCAACTTAT+AGG + chr2_4:59689775-59689794 None:intergenic 35.0%
!! CCTATAAGTTGGTTGAGTAT+TGG - chr2_4:59689772-59689791 Msa0338960:intron 35.0%
TGCACATTAGATATCTGTAC+AGG + chr2_4:59689801-59689820 None:intergenic 35.0%
TGAAATAAGGACATCACGAA+TGG + chr2_4:59689901-59689920 None:intergenic 35.0%
! GTGATGTCCTTATTTCAATC+CGG - chr2_4:59689904-59689923 Msa0338960:intron 35.0%
TAACCTTCCGGATTGAAATA+AGG + chr2_4:59689914-59689933 None:intergenic 35.0%
! AAAAGTGCAAACTAACCTTC+CGG + chr2_4:59689926-59689945 None:intergenic 35.0%
TGACATGCACGATTCATTAT+TGG - chr2_4:59690188-59690207 Msa0338960:intron 35.0%
TCTATTTAGGTCATACCACT+AGG + chr2_4:59690230-59690249 None:intergenic 35.0%
ATCAGTGATCGAAATAGGTT+TGG - chr2_4:59690473-59690492 Msa0338960:intron 35.0%
GAAATAGGTTTGGATTCATG+TGG - chr2_4:59690483-59690502 Msa0338960:intron 35.0%
ATCTTGCTCCGAAGTTAATT+TGG - chr2_4:59690545-59690564 Msa0338960:CDS 35.0%
TAGGGAGACCAAATTAACTT+CGG + chr2_4:59690556-59690575 None:intergenic 35.0%
ACAACGAATGAAAATCAGGA+AGG - chr2_4:59690716-59690735 Msa0338960:CDS 35.0%
TTAACGCATGAAACAGATCT+GGG + chr2_4:59690793-59690812 None:intergenic 35.0%
TTTAACGCATGAAACAGATC+TGG + chr2_4:59690794-59690813 None:intergenic 35.0%
TGATTAAGGATGATTTCGGT+AGG + chr2_4:59690881-59690900 None:intergenic 35.0%
GAGATTATGGGAATGGTTAT+GGG + chr2_4:59690966-59690985 None:intergenic 35.0%
AGAGATTATGGGAATGGTTA+TGG + chr2_4:59690967-59690986 None:intergenic 35.0%
TGGTATAGAGATTATGGGAA+TGG + chr2_4:59690973-59690992 None:intergenic 35.0%
TGATGGGAGAGAGAAAAAAA+AGG - chr2_4:59691186-59691205 Msa0338960:CDS 35.0%
GTTTGGAAGAGTTAAGTCTT+AGG - chr2_4:59691256-59691275 Msa0338960:CDS 35.0%
AAAGTAGAGAAATACTCGGA+TGG + chr2_4:59691289-59691308 None:intergenic 35.0%
! GTGGCTATGAATTTTCGTAA+CGG - chr2_4:59691363-59691382 Msa0338960:intron 35.0%
TTCGTAACGGTTTCATTTAC+TGG - chr2_4:59691376-59691395 Msa0338960:intron 35.0%
CTTTAGTAGTAAAGGTTGCA+GGG + chr2_4:59691452-59691471 None:intergenic 35.0%
CTGCAACCTTTACTACTAAA+GGG - chr2_4:59691451-59691470 Msa0338960:intron 35.0%
!! ACGGCTTTTTCTTTTTGACT+CGG + chr2_4:59691496-59691515 None:intergenic 35.0%
TCCAACATTCAGATATGCAA+CGG + chr2_4:59691515-59691534 None:intergenic 35.0%
GTCAGCAACTTTATGAAGTA+TGG + chr2_4:59691674-59691693 None:intergenic 35.0%
! GTAACTCACCTTCGATTTTA+TGG - chr2_4:59691767-59691786 Msa0338960:CDS 35.0%
!! GATTTTATGGTTCTATGAGG+CGG - chr2_4:59691780-59691799 Msa0338960:CDS 35.0%
ACAAATCCGTCCTTAACAAA+AGG + chr2_4:59692005-59692024 None:intergenic 35.0%
TTAGAGTAAGAATTCGAGAG+AGG - chr2_4:59692068-59692087 Msa0338960:CDS 35.0%
! CTTTAAGAGTAATCAGGTCA+TGG - chr2_4:59692167-59692186 Msa0338960:CDS 35.0%
!! CTAACTGTTTTGAGTAGAGA+AGG - chr2_4:59692235-59692254 Msa0338960:intron 35.0%
!! AACTGTTTTGAGTAGAGAAG+GGG - chr2_4:59692237-59692256 Msa0338960:intron 35.0%
TTAGCAAATCAAATGCACAG+AGG - chr2_4:59692496-59692515 Msa0338960:intron 35.0%
CACACAACATAAAAGAAAGC+AGG + chr2_4:59692620-59692639 None:intergenic 35.0%
! TATGCACTTTGAGAAAAACC+AGG - chr2_4:59692642-59692661 Msa0338960:intron 35.0%
CTTGTCGTTAAATATCTTCG+TGG + chr2_4:59692828-59692847 None:intergenic 35.0%
GGGATCTTATATCATTCATC+GGG + chr2_4:59692952-59692971 None:intergenic 35.0%
ATCAAGTGTCAACTTCTGAA+GGG + chr2_4:59692972-59692991 None:intergenic 35.0%
AATCAAGTGTCAACTTCTGA+AGG + chr2_4:59692973-59692992 None:intergenic 35.0%
! AGAAAGCTTTGATTCTCTCT+AGG - chr2_4:59693047-59693066 Msa0338960:intron 35.0%
TCAACTGTCAATCTTCAAGT+CGG - chr2_4:59693089-59693108 Msa0338960:intron 35.0%
TTATTGAAAGTCCAGCAACA+TGG - chr2_4:59693292-59693311 Msa0338960:intron 35.0%
CAAACAAAGGAGAATTTGCA+AGG + chr2_4:59693327-59693346 None:intergenic 35.0%
CTTGCAAATTCTCCTTTGTT+TGG - chr2_4:59693325-59693344 Msa0338960:intron 35.0%
!!! GTTTTGGAATAATCTGTTGG+TGG - chr2_4:59693390-59693409 Msa0338960:intron 35.0%
! TTTGGAATAATCTGTTGGTG+GGG - chr2_4:59693392-59693411 Msa0338960:intron 35.0%
!! TTTCAATGGAAGTACTCATG+TGG - chr2_4:59693421-59693440 Msa0338960:intron 35.0%
! CAGCCTTTTAATAATTTGGC+AGG - chr2_4:59693472-59693491 Msa0338960:intron 35.0%
CCACCTGCCAAATTATTAAA+AGG + chr2_4:59693478-59693497 None:intergenic 35.0%
! CCTTTTAATAATTTGGCAGG+TGG - chr2_4:59693475-59693494 Msa0338960:intron 35.0%
!! TCACCTACAGATTTTGATGA+AGG + chr2_4:59693568-59693587 None:intergenic 35.0%
AAAGTTACCCAATGGAATCA+AGG - chr2_4:59693588-59693607 Msa0338960:five_prime_UTR 35.0%
GACAGACGAAGAACAATTCA+GGG + chr2_4:59684971-59684990 None:intergenic 40.0%
TGACAGACGAAGAACAATTC+AGG + chr2_4:59684972-59684991 None:intergenic 40.0%
! TGCATGGATTGTAACGGAAT+CGG + chr2_4:59685000-59685019 None:intergenic 40.0%
TGAATCTGACAATCACTGCA+TGG + chr2_4:59685016-59685035 None:intergenic 40.0%
ATGCAGTGATTGTCAGATTC+AGG - chr2_4:59685015-59685034 Msa0338960:CDS 40.0%
! TTTTAGTCTCTTCCTACGGA+GGG - chr2_4:59685475-59685494 Msa0338960:CDS 40.0%
!!! CACGTGGTTTTGTATTTTGC+GGG - chr2_4:59685506-59685525 Msa0338960:CDS 40.0%
GGGACTATAGAGTAGATTCA+GGG - chr2_4:59685526-59685545 Msa0338960:CDS 40.0%
CACCATAGTACCAACTACAA+AGG + chr2_4:59686231-59686250 None:intergenic 40.0%
! TTTTTGCTTTCTCGCTGCTT+CGG + chr2_4:59686451-59686470 None:intergenic 40.0%
AGACTTCTGAGTACTTGAAG+AGG + chr2_4:59686552-59686571 None:intergenic 40.0%
AAGTCTGAGCAAGTAGAGAA+GGG - chr2_4:59686566-59686585 Msa0338960:intron 40.0%
!! ACAGACTTTCTTCTGGTTTC+AGG + chr2_4:59686605-59686624 None:intergenic 40.0%
!!! CCTGCACTTTTAGAATCTGA+AGG + chr2_4:59686707-59686726 None:intergenic 40.0%
! CCTTCAGATTCTAAAAGTGC+AGG - chr2_4:59686704-59686723 Msa0338960:intron 40.0%
! TCTAAAAGTGCAGGTTCTCT+TGG - chr2_4:59686713-59686732 Msa0338960:intron 40.0%
! GCAATTGACATTTGAAGCCA+AGG - chr2_4:59686778-59686797 Msa0338960:intron 40.0%
TGAAAATGAGGAACACAACG+TGG - chr2_4:59686808-59686827 Msa0338960:intron 40.0%
AAAGAGAGACCGATACATCA+GGG + chr2_4:59686867-59686886 None:intergenic 40.0%
TAAAGAGAGACCGATACATC+AGG + chr2_4:59686868-59686887 None:intergenic 40.0%
TAGTTAAATGAAGCTAGCGC+AGG - chr2_4:59687053-59687072 Msa0338960:CDS 40.0%
AGTTAAATGAAGCTAGCGCA+GGG - chr2_4:59687054-59687073 Msa0338960:CDS 40.0%
! GCTTGATTTTCAGATTGCCT+TGG - chr2_4:59687203-59687222 Msa0338960:intron 40.0%
ATTAGCAAGCCAAATCAGGA+AGG - chr2_4:59687239-59687258 Msa0338960:intron 40.0%
!! ACTCTAGGATTGGCGATAAA+AGG - chr2_4:59687384-59687403 Msa0338960:intron 40.0%
!! GATAAAAGGTGCCAAAGCAA+AGG - chr2_4:59687398-59687417 Msa0338960:intron 40.0%
AGCAAAGGTGACAATAGTAG+TGG - chr2_4:59687413-59687432 Msa0338960:intron 40.0%
GTACACTTCCATTCGAAGAT+GGG - chr2_4:59687498-59687517 Msa0338960:intron 40.0%
TTTGCTTTCCCATCTTCGAA+TGG + chr2_4:59687509-59687528 None:intergenic 40.0%
! AAGAAACCAGAGTTGACTCT+AGG - chr2_4:59687528-59687547 Msa0338960:intron 40.0%
TACTGTTGTCAGCTTTGCTT+TGG + chr2_4:59687571-59687590 None:intergenic 40.0%
AGCAAAGCTGACAACAGTAT+TGG - chr2_4:59687572-59687591 Msa0338960:intron 40.0%
! AACTCTGGTCTCTTTTGCTT+TGG + chr2_4:59687681-59687700 None:intergenic 40.0%
AAGAGACCAGAGTTAACTCT+AGG - chr2_4:59687687-59687706 Msa0338960:intron 40.0%
ACTCAACCTAGAGTTAACTC+TGG + chr2_4:59687696-59687715 None:intergenic 40.0%
! AGAGTTAACTCTAGGTTGAG+TGG - chr2_4:59687695-59687714 Msa0338960:intron 40.0%
! GAGTTAACTCTAGGTTGAGT+GGG - chr2_4:59687696-59687715 Msa0338960:intron 40.0%
! TCATAAGTTGGGGTGTTAGA+TGG + chr2_4:59687770-59687789 None:intergenic 40.0%
! CACACTAGTCTCATAAGTTG+GGG + chr2_4:59687780-59687799 None:intergenic 40.0%
! CCACACTAGTCTCATAAGTT+GGG + chr2_4:59687781-59687800 None:intergenic 40.0%
! ACCACACTAGTCTCATAAGT+TGG + chr2_4:59687782-59687801 None:intergenic 40.0%
GTGATTGCCTTTCTCTTAGA+AGG + chr2_4:59687935-59687954 None:intergenic 40.0%
TAAGAGAAAGGCAATCACTG+TGG - chr2_4:59687937-59687956 Msa0338960:intron 40.0%
GACGGTTTGATATAGAGGAA+GGG + chr2_4:59688196-59688215 None:intergenic 40.0%
AGACGGTTTGATATAGAGGA+AGG + chr2_4:59688197-59688216 None:intergenic 40.0%
CATGTTTGTTTGGATGGTGT+CGG - chr2_4:59688403-59688422 Msa0338960:intron 40.0%
! TCTGTAAGTCTTCTTTTGCC+TGG + chr2_4:59688922-59688941 None:intergenic 40.0%
CATTGGCACTTTGACGTATT+AGG - chr2_4:59689128-59689147 Msa0338960:intron 40.0%
! TTGACGTATTAGGCGTTTTC+AGG - chr2_4:59689138-59689157 Msa0338960:intron 40.0%
!!! CGTTTTCAGGTCTAAGTGAT+TGG - chr2_4:59689151-59689170 Msa0338960:intron 40.0%
TGGTTCTTTACTTTGCAGGT+TGG - chr2_4:59689171-59689190 Msa0338960:intron 40.0%
!! TTTTAAGTAAATTGGGGGGG+GGG + chr2_4:59689295-59689314 None:intergenic 40.0%
TCAGGACATAGATGTCATTG+AGG - chr2_4:59689499-59689518 Msa0338960:intron 40.0%
!! CACATTTGAGTTGAGGGATA+AGG + chr2_4:59689609-59689628 None:intergenic 40.0%
!! TCAAAGTGTTGTTCATCCGA+AGG - chr2_4:59689707-59689726 Msa0338960:intron 40.0%
TCACTTGACACTTTCTCCTT+CGG + chr2_4:59689726-59689745 None:intergenic 40.0%
!! TCGCCAAAGATTGATAGTGT+TGG - chr2_4:59689873-59689892 Msa0338960:intron 40.0%
!! CGCCAAAGATTGATAGTGTT+GGG - chr2_4:59689874-59689893 Msa0338960:intron 40.0%
!! GCCAAAGATTGATAGTGTTG+GGG - chr2_4:59689875-59689894 Msa0338960:intron 40.0%
! TGTCCTTATTTCAATCCGGA+AGG - chr2_4:59689908-59689927 Msa0338960:intron 40.0%
ATTGTACTAACCAAATGCGG+CGG + chr2_4:59690019-59690038 None:intergenic 40.0%
AAACGTCCTATTTCACCTAG+TGG - chr2_4:59690212-59690231 Msa0338960:intron 40.0%
GTCATACCACTAGGTGAAAT+AGG + chr2_4:59690221-59690240 None:intergenic 40.0%
AAGGTGAGGATTGTCAAAGT+TGG + chr2_4:59690259-59690278 None:intergenic 40.0%
!! ACCTTGCAAGCAAGTTTTGT+AGG - chr2_4:59690274-59690293 Msa0338960:intron 40.0%
!! CCTTGCAAGCAAGTTTTGTA+GGG - chr2_4:59690275-59690294 Msa0338960:intron 40.0%
! TTTGGGTGGCAATCTAGAAT+AGG + chr2_4:59690331-59690350 None:intergenic 40.0%
TTATGCCTGATCAATTTGGG+TGG + chr2_4:59690345-59690364 None:intergenic 40.0%
ACCCAAATTGATCAGGCATA+AGG - chr2_4:59690344-59690363 Msa0338960:intron 40.0%
GCCTTATGCCTGATCAATTT+GGG + chr2_4:59690348-59690367 None:intergenic 40.0%
TGCCTTATGCCTGATCAATT+TGG + chr2_4:59690349-59690368 None:intergenic 40.0%
CATCGATCAGTGATCGAAAT+AGG - chr2_4:59690468-59690487 Msa0338960:intron 40.0%
!! TCTCTCTCTCTCGTTGTTTT+TGG - chr2_4:59690759-59690778 Msa0338960:CDS 40.0%
!!! CTCTCTCTCTCGTTGTTTTT+GGG - chr2_4:59690760-59690779 Msa0338960:CDS 40.0%
!!! TCTCTCTCTCGTTGTTTTTG+GGG - chr2_4:59690761-59690780 Msa0338960:CDS 40.0%
! CACACTCAGGCACAATATTT+TGG + chr2_4:59690993-59691012 None:intergenic 40.0%
CAATAGAACAATGCTCGTGT+GGG + chr2_4:59691058-59691077 None:intergenic 40.0%
CCTTTAGTAGTAAAGGTTGC+AGG + chr2_4:59691453-59691472 None:intergenic 40.0%
CCTGCAACCTTTACTACTAA+AGG - chr2_4:59691450-59691469 Msa0338960:intron 40.0%
TCAAGGCCCTTTAGTAGTAA+AGG + chr2_4:59691460-59691479 None:intergenic 40.0%
TCGGATACTCAACTTCTTCA+AGG + chr2_4:59691477-59691496 None:intergenic 40.0%
!!! AAGGGCACTCATACTTTTTC+AGG - chr2_4:59691600-59691619 Msa0338960:intron 40.0%
ATCCGTCCTTAACAAAAGGT+GGG + chr2_4:59692001-59692020 None:intergenic 40.0%
AATCCGTCCTTAACAAAAGG+TGG + chr2_4:59692002-59692021 None:intergenic 40.0%
AAATCAAATGCACAGAGGCA+TGG - chr2_4:59692501-59692520 Msa0338960:intron 40.0%
! TTGTACTGGTGTATGTGTGT+TGG - chr2_4:59692571-59692590 Msa0338960:intron 40.0%
!! ATGTGTGTTGGTTACTGCTT+AGG - chr2_4:59692583-59692602 Msa0338960:intron 40.0%
!! TGTGTGTTGGTTACTGCTTA+GGG - chr2_4:59692584-59692603 Msa0338960:intron 40.0%
GTCTTTCCAGAAACTCCAAT+TGG + chr2_4:59692704-59692723 None:intergenic 40.0%
! CAATTTTATGCTAGGATGGC+AGG + chr2_4:59692888-59692907 None:intergenic 40.0%
GCTTTCTCTTCAACAGTGAA+AGG + chr2_4:59693034-59693053 None:intergenic 40.0%
! AGATTGACAGTTGATGTCCA+GGG + chr2_4:59693083-59693102 None:intergenic 40.0%
! AAGATTGACAGTTGATGTCC+AGG + chr2_4:59693084-59693103 None:intergenic 40.0%
CAACTGTCAATCTTCAAGTC+GGG - chr2_4:59693090-59693109 Msa0338960:intron 40.0%
AACTGTCAATCTTCAAGTCG+GGG - chr2_4:59693091-59693110 Msa0338960:intron 40.0%
TCAGTCATACTCTCTTGATG+TGG - chr2_4:59693116-59693135 Msa0338960:intron 40.0%
CAGTCATACTCTCTTGATGT+GGG - chr2_4:59693117-59693136 Msa0338960:intron 40.0%
AGTCATACTCTCTTGATGTG+GGG - chr2_4:59693118-59693137 Msa0338960:intron 40.0%
! GAGTTGAGAGTTTTCCATGA+CGG - chr2_4:59693160-59693179 Msa0338960:intron 40.0%
!!! CAGTGGTTTTAGATTTGACG+TGG + chr2_4:59693194-59693213 None:intergenic 40.0%
! GTCAAATCTAAAACCACTGC+TGG - chr2_4:59693195-59693214 Msa0338960:intron 40.0%
CAAAGGAGAATTTGCAAGGT+AGG + chr2_4:59693323-59693342 None:intergenic 40.0%
AATTCCTGCTCACCAAACAA+AGG + chr2_4:59693340-59693359 None:intergenic 40.0%
! TGTTTGGTGAGCAGGAATTT+AGG - chr2_4:59693341-59693360 Msa0338960:intron 40.0%
!!! AAGAGGTACCACAAACGTTT+TGG - chr2_4:59693374-59693393 Msa0338960:intron 40.0%
CAGCCTTCATCAAAATCTGT+AGG - chr2_4:59693562-59693581 Msa0338960:five_prime_UTR 40.0%
GTAGGTGAAAAGTTACCCAA+TGG - chr2_4:59693580-59693599 Msa0338960:five_prime_UTR 40.0%
TAACCTGCCTTGATTCCATT+GGG + chr2_4:59693598-59693617 None:intergenic 40.0%
!! GAACAATTCAGGGTCGGTTT+TGG + chr2_4:59684961-59684980 None:intergenic 45.0%
GACGAAGAACAATTCAGGGT+CGG + chr2_4:59684967-59684986 None:intergenic 45.0%
!! GTTTTAGTCTCTTCCTACGG+AGG - chr2_4:59685474-59685493 Msa0338960:CDS 45.0%
CGGGACTATAGAGTAGATTC+AGG - chr2_4:59685525-59685544 Msa0338960:CDS 45.0%
TTCTCAAGTTACTCAAGGGG+AGG + chr2_4:59686064-59686083 None:intergenic 45.0%
TCGTTCTAGTCAAAAGGCCA+AGG - chr2_4:59686397-59686416 Msa0338960:intron 45.0%
! TTTTGCTTTCTCGCTGCTTC+GGG + chr2_4:59686450-59686469 None:intergenic 45.0%
CCAGCTGTATCCGATACATT+GGG + chr2_4:59686485-59686504 None:intergenic 45.0%
ACCAGCTGTATCCGATACAT+TGG + chr2_4:59686486-59686505 None:intergenic 45.0%
GAAGTCTGAGCAAGTAGAGA+AGG - chr2_4:59686565-59686584 Msa0338960:intron 45.0%
!! TTTCTTCTGGTTTCAGGAGC+TGG + chr2_4:59686599-59686618 None:intergenic 45.0%
GACCCTTACAGACTTTCTTC+TGG + chr2_4:59686612-59686631 None:intergenic 45.0%
! GTTTTGCCAGATCTCGTCAA+AGG + chr2_4:59686662-59686681 None:intergenic 45.0%
TGACGAGATCTGGCAAAACT+AGG - chr2_4:59686663-59686682 Msa0338960:intron 45.0%
AAATGACCGCCCTGATGTAT+CGG - chr2_4:59686855-59686874 Msa0338960:intron 45.0%
GCCAACTTTCTTGTTCACTC+AGG - chr2_4:59686938-59686957 Msa0338960:intron 45.0%
GCCTGAGTGAACAAGAAAGT+TGG + chr2_4:59686942-59686961 None:intergenic 45.0%
CTTTCTTGTTCACTCAGGCA+CGG - chr2_4:59686943-59686962 Msa0338960:intron 45.0%
GTTAAATGAAGCTAGCGCAG+GGG - chr2_4:59687055-59687074 Msa0338960:CDS 45.0%
! GTTTCTCCTAATCGCTGGTT+GGG - chr2_4:59687077-59687096 Msa0338960:CDS 45.0%
AAACAACCCAACCAGCGATT+AGG + chr2_4:59687086-59687105 None:intergenic 45.0%
CTGTTGTCACCTTCCTGATT+TGG + chr2_4:59687251-59687270 None:intergenic 45.0%
! AACTGTGGTCTCTTTTGCTG+TGG + chr2_4:59687363-59687382 None:intergenic 45.0%
! AAGAGACCACAGTTGACTCT+AGG - chr2_4:59687369-59687388 Msa0338960:intron 45.0%
!! ACCACAGTTGACTCTAGGAT+TGG - chr2_4:59687374-59687393 Msa0338960:intron 45.0%
GGTACACTTCCATTCGAAGA+TGG - chr2_4:59687497-59687516 Msa0338960:intron 45.0%
CCCAACTTATGAGACTAGTG+TGG - chr2_4:59687778-59687797 Msa0338960:intron 45.0%
! GACTTGGTCAGTAACAATGC+TGG - chr2_4:59687884-59687903 Msa0338960:intron 45.0%
! GTCAGTAACAATGCTGGTCT+TGG - chr2_4:59687890-59687909 Msa0338960:intron 45.0%
!! AGTAACAATGCTGGTCTTGG+TGG - chr2_4:59687893-59687912 Msa0338960:intron 45.0%
!! GTAACAATGCTGGTCTTGGT+GGG - chr2_4:59687894-59687913 Msa0338960:intron 45.0%
!! TAACAATGCTGGTCTTGGTG+GGG - chr2_4:59687895-59687914 Msa0338960:intron 45.0%
!!! GTTTTGAAGGGAGAGCATCA+GGG + chr2_4:59688018-59688037 None:intergenic 45.0%
!!! AGTTTTGAAGGGAGAGCATC+AGG + chr2_4:59688019-59688038 None:intergenic 45.0%
GATGCTCTCCCTTCAAAACT+AGG - chr2_4:59688019-59688038 Msa0338960:intron 45.0%
!!! CGTTGCCACCTAGTTTTGAA+GGG + chr2_4:59688030-59688049 None:intergenic 45.0%
!!! TCGTTGCCACCTAGTTTTGA+AGG + chr2_4:59688031-59688050 None:intergenic 45.0%
GAGTTGCAGATGTGTGCAAA+AGG + chr2_4:59688570-59688589 None:intergenic 45.0%
!! GGATTTTAATCCTACAGCCG+AGG - chr2_4:59689192-59689211 Msa0338960:intron 45.0%
TTTAAGTAAATTGGGGGGGG+GGG + chr2_4:59689294-59689313 None:intergenic 45.0%
AGGGAACAGATTCTATGCCT+GGG + chr2_4:59689390-59689409 None:intergenic 45.0%
AAGGGAACAGATTCTATGCC+TGG + chr2_4:59689391-59689410 None:intergenic 45.0%
AAGTGGAACTGGACACCTTA+AGG - chr2_4:59689556-59689575 Msa0338960:intron 45.0%
CAAGTCGGACTCCTATAAGT+TGG - chr2_4:59689761-59689780 Msa0338960:intron 45.0%
GCCCCAACACTATCAATCTT+TGG + chr2_4:59689879-59689898 None:intergenic 45.0%
!! CTTTTTCATTCCGCCGCATT+TGG - chr2_4:59690006-59690025 Msa0338960:intron 45.0%
! CAAAACTTGCTTGCAAGGTG+AGG + chr2_4:59690273-59690292 None:intergenic 45.0%
! CCCTACAAAACTTGCTTGCA+AGG + chr2_4:59690278-59690297 None:intergenic 45.0%
GATTGCCACCCAAATTGATC+AGG - chr2_4:59690337-59690356 Msa0338960:intron 45.0%
!!! CTCTCTCTCGTTGTTTTTGG+GGG - chr2_4:59690762-59690781 Msa0338960:CDS 45.0%
CTACGGCTTCACATGCAAAT+GGG - chr2_4:59690938-59690957 Msa0338960:CDS 45.0%
GCAATAGAACAATGCTCGTG+TGG + chr2_4:59691059-59691078 None:intergenic 45.0%
TTAACTCCACAGCTGTGAAG+TGG - chr2_4:59691344-59691363 Msa0338960:intron 45.0%
GCCGTTGCATATCTGAATGT+TGG - chr2_4:59691511-59691530 Msa0338960:intron 45.0%
TTACCAAGTCGCATCCTACT+GGG + chr2_4:59691751-59691770 None:intergenic 45.0%
CACATTGTAGTCACACTCAG+AGG - chr2_4:59691846-59691865 Msa0338960:CDS 45.0%
! GTTGACCCCACCTTTTGTTA+AGG - chr2_4:59691992-59692011 Msa0338960:CDS 45.0%
! ACCCCACCTTTTGTTAAGGA+CGG - chr2_4:59691996-59692015 Msa0338960:CDS 45.0%
TCCGTCCTTAACAAAAGGTG+GGG + chr2_4:59692000-59692019 None:intergenic 45.0%
TTTGAGTAGAGAAGGGGAAG+AGG - chr2_4:59692243-59692262 Msa0338960:intron 45.0%
TTGAGTAGAGAAGGGGAAGA+GGG - chr2_4:59692244-59692263 Msa0338960:intron 45.0%
GAGAAAGGTTGAGCCATTGA+TGG - chr2_4:59692270-59692289 Msa0338960:intron 45.0%
TTGAGCCATTGATGGAGAGA+AGG - chr2_4:59692278-59692297 Msa0338960:intron 45.0%
AGTCTCCTTCTCTCCATCAA+TGG + chr2_4:59692286-59692305 None:intergenic 45.0%
GGATGAATGCCATCAAGAAG+TGG - chr2_4:59692309-59692328 Msa0338960:intron 45.0%
TTGCAGCCAATTGGAGTTTC+TGG - chr2_4:59692695-59692714 Msa0338960:intron 45.0%
GACTTCCTGCGACAAAGATT+TGG - chr2_4:59692746-59692765 Msa0338960:intron 45.0%
GCTTTGATTCTCTCTAGGCA+AGG - chr2_4:59693052-59693071 Msa0338960:intron 45.0%
! GAAACTGTTTCTTCCAGCAG+TGG + chr2_4:59693211-59693230 None:intergenic 45.0%
TCATCCTGTCTAGCTGATGT+TGG - chr2_4:59693238-59693257 Msa0338960:intron 45.0%
TTCACCAACATCAGCTAGAC+AGG + chr2_4:59693245-59693264 None:intergenic 45.0%
TTGAAAGTCCAGCAACATGG+AGG - chr2_4:59693295-59693314 Msa0338960:intron 45.0%
! TTCTCCTTTGTTTGGTGAGC+AGG - chr2_4:59693333-59693352 Msa0338960:intron 45.0%
GTTTGTGGTACCTCTTCATC+CGG + chr2_4:59693370-59693389 None:intergenic 45.0%
ACTCATGTGGTTCATCTCAG+CGG - chr2_4:59693434-59693453 Msa0338960:intron 45.0%
TAAAAGGCTGAACTCTCCTC+CGG + chr2_4:59693462-59693481 None:intergenic 45.0%
TGTGCCTTCATTCACATGGT+CGG + chr2_4:59693503-59693522 None:intergenic 45.0%
TTGCTGTGCCTTCATTCACA+TGG + chr2_4:59693507-59693526 None:intergenic 45.0%
TTACCCAATGGAATCAAGGC+AGG - chr2_4:59693592-59693611 Msa0338960:five_prime_UTR 45.0%
CTAACCTGCCTTGATTCCAT+TGG + chr2_4:59693599-59693618 None:intergenic 45.0%
AATCAAGGCAGGTTAGTGTC+TGG - chr2_4:59693603-59693622 Msa0338960:five_prime_UTR 45.0%
!! ATATAAAAATGTAAATATAT+GGG - chr2_4:59689053-59689072 Msa0338960:intron 5.0%
!! AAATTATTAAAAAATATGAA+AGG + chr2_4:59690137-59690156 None:intergenic 5.0%
!!! AATTTTAAAATCAAAATATA+CGG + chr2_4:59691107-59691126 None:intergenic 5.0%
!!! TATATTTTGATTTTAAAATT+TGG - chr2_4:59691107-59691126 Msa0338960:CDS 5.0%
!!! ATATTTTGATTTTAAAATTT+GGG - chr2_4:59691108-59691127 Msa0338960:CDS 5.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2_4:59685044-59685063 None:intergenic 50.0%
!!! CGTGTTTTTAGTCCCTCCGT+AGG + chr2_4:59685490-59685509 None:intergenic 50.0%
ACGGAGGGACTAAAAACACG+TGG - chr2_4:59685490-59685509 Msa0338960:CDS 50.0%
CCCAATGTATCGGATACAGC+TGG - chr2_4:59686482-59686501 Msa0338960:intron 50.0%
CCAGATCTCGTCAAAGGACT+TGG + chr2_4:59686656-59686675 None:intergenic 50.0%
CCAAGTCCTTTGACGAGATC+TGG - chr2_4:59686653-59686672 Msa0338960:intron 50.0%
ACACAACGTGGAAAGTTCCC+AGG - chr2_4:59686820-59686839 Msa0338960:intron 50.0%
GGTTTCTCCTAATCGCTGGT+TGG - chr2_4:59687076-59687095 Msa0338960:CDS 50.0%
CAGGAAGGTGACAACAGTAG+TGG - chr2_4:59687254-59687273 Msa0338960:intron 50.0%
GAAGAACGGTACACTGCCAT+CGG - chr2_4:59687331-59687350 Msa0338960:intron 50.0%
! TTTGCTGTGGCATCTTCCGA+TGG + chr2_4:59687350-59687369 None:intergenic 50.0%
GCCAATCCTAGAGTCAACTG+TGG + chr2_4:59687378-59687397 None:intergenic 50.0%
TCAGCTTTGCTTTGGCACCT+TGG + chr2_4:59687563-59687582 None:intergenic 50.0%
GCAGAAAATTGTGCGACTCC+TGG - chr2_4:59687734-59687753 Msa0338960:intron 50.0%
CAATCAGGCTGTCCTCTTCT+GGG + chr2_4:59687806-59687825 None:intergenic 50.0%
!! AACAATGCTGGTCTTGGTGG+GGG - chr2_4:59687896-59687915 Msa0338960:intron 50.0%
GCTCTCCCTTCAAAACTAGG+TGG - chr2_4:59688022-59688041 Msa0338960:intron 50.0%
TAACCCATGTGCAACTGAGG+TGG - chr2_4:59689222-59689241 Msa0338960:intron 50.0%
AACCCATGTGCAACTGAGGT+GGG - chr2_4:59689223-59689242 Msa0338960:intron 50.0%
TTAAGTAAATTGGGGGGGGG+GGG + chr2_4:59689293-59689312 None:intergenic 50.0%
GCTCTTATCCTTCTGCTGCA+CGG + chr2_4:59689528-59689547 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG + chr2_4:59685045-59685064 None:intergenic 50.0%
CACTTCATGCCCATCAGCTA+CGG - chr2_4:59690921-59690940 Msa0338960:CDS 50.0%
CATGTGAAGCCGTAGCTGAT+GGG + chr2_4:59690933-59690952 None:intergenic 50.0%
GCTACGGCTTCACATGCAAA+TGG - chr2_4:59690937-59690956 Msa0338960:CDS 50.0%
TCATAGCCACTTCACAGCTG+TGG + chr2_4:59691353-59691372 None:intergenic 50.0%
GTTACCAAGTCGCATCCTAC+TGG + chr2_4:59691752-59691771 None:intergenic 50.0%
ACCAGGATCACAAGTCGTGT+GGG + chr2_4:59691816-59691835 None:intergenic 50.0%
CAATGTGCTCATGCAAGACC+AGG + chr2_4:59691833-59691852 None:intergenic 50.0%
ACTCAGAGGCAGCAACATTG+TGG - chr2_4:59691860-59691879 Msa0338960:CDS 50.0%
AAAAGGTGGGGTCAACTGCA+TGG + chr2_4:59691988-59692007 None:intergenic 50.0%
GATGGAGAGAAGGAGACTTG+AGG - chr2_4:59692288-59692307 Msa0338960:intron 50.0%
CTTCGCCAAATCTTTGTCGC+AGG + chr2_4:59692754-59692773 None:intergenic 50.0%
TGAGCAGGAATTTAGGTCGC+CGG - chr2_4:59693348-59693367 Msa0338960:intron 50.0%
ATTTAGGTCGCCGGATGAAG+AGG - chr2_4:59693357-59693376 Msa0338960:intron 50.0%
TGGTGGGGAGACAGTTTCAA+TGG - chr2_4:59693407-59693426 Msa0338960:intron 50.0%
CTCGTCAAAGGACTTGGCGT+TGG + chr2_4:59686650-59686669 None:intergenic 55.0%
GAGAGACCGATACATCAGGG+CGG + chr2_4:59686864-59686883 None:intergenic 55.0%
CAGGGGTTTCTCCTAATCGC+TGG - chr2_4:59687072-59687091 Msa0338960:CDS 55.0%
GTCGGTCCTAGAGTCAACTC+TGG + chr2_4:59687537-59687556 None:intergenic 55.0%
ACTAGTGTGGTGCCCAGAAG+AGG - chr2_4:59687791-59687810 Msa0338960:intron 55.0%
GCAATCAGGCTGTCCTCTTC+TGG + chr2_4:59687807-59687826 None:intergenic 55.0%
ACAGCCTGATTGCTGCGAAG+AGG - chr2_4:59687814-59687833 Msa0338960:intron 55.0%
GTCTCCTCTTCGCAGCAATC+AGG + chr2_4:59687821-59687840 None:intergenic 55.0%
! ACATGGGTTACGCGACTCCT+CGG + chr2_4:59689212-59689231 None:intergenic 55.0%
GCGTAACCCATGTGCAACTG+AGG - chr2_4:59689219-59689238 Msa0338960:intron 55.0%
CACCCACCTCAGTTGCACAT+GGG + chr2_4:59689228-59689247 None:intergenic 55.0%
ACACCCACCTCAGTTGCACA+TGG + chr2_4:59689229-59689248 None:intergenic 55.0%
TAAGTAAATTGGGGGGGGGG+GGG + chr2_4:59689292-59689311 None:intergenic 55.0%
TTCTATGCCTGGGCACCAGA+GGG + chr2_4:59689380-59689399 None:intergenic 55.0%
ATTCTATGCCTGGGCACCAG+AGG + chr2_4:59689381-59689400 None:intergenic 55.0%
TGAGGAAACCGTGCAGCAGA+AGG - chr2_4:59689517-59689536 Msa0338960:intron 55.0%
GATAAGAGCGACCACGCAAG+TGG - chr2_4:59689539-59689558 Msa0338960:intron 55.0%
GGGATTTCAGGGTAGCACTG+TGG - chr2_4:59689653-59689672 Msa0338960:intron 55.0%
AGGCATAAGACCCCTGAGTG+AGG - chr2_4:59690364-59690383 Msa0338960:intron 55.0%
CATAAGACCCCTGAGTGAGG+TGG - chr2_4:59690367-59690386 Msa0338960:intron 55.0%
TCGAGTACCACCTCACTCAG+GGG + chr2_4:59690377-59690396 None:intergenic 55.0%
CTCGAGTACCACCTCACTCA+GGG + chr2_4:59690378-59690397 None:intergenic 55.0%
TCTCGAGTACCACCTCACTC+AGG + chr2_4:59690379-59690398 None:intergenic 55.0%
GCATGTGAAGCCGTAGCTGA+TGG + chr2_4:59690934-59690953 None:intergenic 55.0%
! GGCTGAAGAGTGTGTTGCGT+AGG + chr2_4:59691037-59691056 None:intergenic 55.0%
GATCACAAGTCGTGTGGGCA+CGG + chr2_4:59691811-59691830 None:intergenic 55.0%
GACCAGGATCACAAGTCGTG+TGG + chr2_4:59691817-59691836 None:intergenic 55.0%
GTAGAGAAGGGGAAGAGGGA+TGG - chr2_4:59692248-59692267 Msa0338960:intron 55.0%
AGGGGAAGAGGGATGGAGAA+AGG - chr2_4:59692255-59692274 Msa0338960:intron 55.0%
! CTTCGTGGCAGCTTGCTTCT+TGG + chr2_4:59692813-59692832 None:intergenic 55.0%
CTCTAGGCAAGGTAAGACCC+TGG - chr2_4:59693063-59693082 Msa0338960:intron 55.0%
ACGTGGAAGTTGCACCGTCA+TGG + chr2_4:59693177-59693196 None:intergenic 55.0%
GGGACCGACCATGTGAATGA+AGG - chr2_4:59693496-59693515 Msa0338960:intron 55.0%
!! ACTCTAGGACCGACGAGCCA+AGG - chr2_4:59687543-59687562 Msa0338960:intron 60.0%
! GCTTTGGCACCTTGGCTCGT+CGG + chr2_4:59687555-59687574 None:intergenic 60.0%
TGTGTGTGAGCGCACGCATG+AGG + chr2_4:59688887-59688906 None:intergenic 60.0%
TTACGCGACTCCTCGGCTGT+AGG + chr2_4:59689205-59689224 None:intergenic 60.0%
AAGTAAATTGGGGGGGGGGG+GGG + chr2_4:59689291-59689310 None:intergenic 60.0%
AGCGACCACGCAAGTGGAAC+TGG - chr2_4:59689545-59689564 Msa0338960:intron 60.0%
GGTGTCCAGTTCCACTTGCG+TGG + chr2_4:59689553-59689572 None:intergenic 60.0%
CGTGGGTCAAGTACGTGACC+CGG + chr2_4:59691726-59691745 None:intergenic 60.0%
ACTTGACCCACGTGCCCAGT+AGG - chr2_4:59691734-59691753 Msa0338960:CDS 60.0%
TCGCATCCTACTGGGCACGT+GGG + chr2_4:59691743-59691762 None:intergenic 60.0%
GTGCCCAGTAGGATGCGACT+TGG - chr2_4:59691745-59691764 Msa0338960:CDS 60.0%
GCCCACACGACTTGTGATCC+TGG - chr2_4:59691812-59691831 Msa0338960:CDS 60.0%
GGTAGGCTCCTCCATGTTGC+TGG + chr2_4:59693306-59693325 None:intergenic 60.0%
GTGGTTCATCTCAGCGGAGC+CGG - chr2_4:59693440-59693459 Msa0338960:intron 60.0%
AGTAAATTGGGGGGGGGGGG+GGG + chr2_4:59689290-59689309 None:intergenic 65.0%
TCAACAGCCCTCTGGTGCCC+AGG - chr2_4:59689370-59689389 Msa0338960:intron 65.0%
GTCGCATCCTACTGGGCACG+TGG + chr2_4:59691744-59691763 None:intergenic 65.0%
CACAAGTCGTGTGGGCACGG+CGG + chr2_4:59691808-59691827 None:intergenic 65.0%
GTTCATCTCAGCGGAGCCGG+AGG - chr2_4:59693443-59693462 Msa0338960:intron 65.0%
TAAATTGGGGGGGGGGGGGG+GGG + chr2_4:59689288-59689307 None:intergenic 70.0%
GTAAATTGGGGGGGGGGGGG+GGG + chr2_4:59689289-59689308 None:intergenic 70.0%
AAATTGGGGGGGGGGGGGGG+GGG + chr2_4:59689287-59689306 None:intergenic 75.0%
! AATTGGGGGGGGGGGGGGGG+GGG + chr2_4:59689286-59689305 None:intergenic 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689285-59689304 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGATG+TGG + chr2_4:59689268-59689287 None:intergenic 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689284-59689303 None:intergenic 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr2_4:59689283-59689302 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 59684913 59693657 59684913 ID=Msa0338960;Name=Msa0338960
chr2_4 mRNA 59684913 59693657 59684913 ID=Msa0338960-mRNA-1;Parent=Msa0338960;Name=Msa0338960-mRNA-1;_AED=0.03;_eAED=0.03;_QI=155|1|1|1|0.85|0.75|8|39|963
chr2_4 exon 59684913 59685869 59684913 ID=Msa0338960-mRNA-1:exon:18558;Parent=Msa0338960-mRNA-1
chr2_4 exon 59686949 59687152 59686949 ID=Msa0338960-mRNA-1:exon:18557;Parent=Msa0338960-mRNA-1
chr2_4 exon 59688641 59688907 59688641 ID=Msa0338960-mRNA-1:exon:18556;Parent=Msa0338960-mRNA-1
chr2_4 exon 59688993 59689067 59688993 ID=Msa0338960-mRNA-1:exon:18555;Parent=Msa0338960-mRNA-1
chr2_4 exon 59689330 59689381 59689330 ID=Msa0338960-mRNA-1:exon:18554;Parent=Msa0338960-mRNA-1
chr2_4 exon 59690499 59691354 59690499 ID=Msa0338960-mRNA-1:exon:18553;Parent=Msa0338960-mRNA-1
chr2_4 exon 59691668 59692218 59691668 ID=Msa0338960-mRNA-1:exon:18552;Parent=Msa0338960-mRNA-1
chr2_4 exon 59693534 59693657 59693534 ID=Msa0338960-mRNA-1:exon:18551;Parent=Msa0338960-mRNA-1
chr2_4 five_prime_UTR 59693534 59693657 59693534 ID=Msa0338960-mRNA-1:five_prime_utr;Parent=Msa0338960-mRNA-1
chr2_4 five_prime_UTR 59692188 59692218 59692188 ID=Msa0338960-mRNA-1:five_prime_utr;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59691668 59692187 59691668 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59690499 59691354 59690499 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59689330 59689381 59689330 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59688993 59689067 59688993 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59688641 59688907 59688641 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59686949 59687152 59686949 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 CDS 59684952 59685869 59684952 ID=Msa0338960-mRNA-1:cds;Parent=Msa0338960-mRNA-1
chr2_4 three_prime_UTR 59684913 59684951 59684913 ID=Msa0338960-mRNA-1:three_prime_utr;Parent=Msa0338960-mRNA-1
Gene Sequence

>Msa0338960

ATGGTAAAAAGTACTCGTTCTAGTCAAAAGGCCAAGGATGAAGAAAATAATAATGGGAGGGTGACCCGAAGCAGCGAGAAAGCAAAAATAAAAGCACATCCCAATGTATCGGATACAGCTGGTATTAGAAAGTCTTCTAGAGAAAAACCATCAAAGATAATTGCAACCTCTTCAAGTACTCAGAAGTCTGAGCAAGTAGAGAAGGGAACACTGCCAGCTCCTGAAACCAGAAGAAAGTCTGTAAGGGTCGAGAAAATGAAAACACCAACGCCAAGTCCTTTGACGAGATCTGGCAAAACTAGGAATCATTCTTTTTCTGGTCCTTCAGATTCTAAAAGTGCAGGTTCTCTTGGTTCAATTTCGAGACAGAAGCTACAAAAAGAGAAGAGTGTGAAGCAATTGACATTTGAAGCCAAGGAAGTGAATGAAAATGAGGAACACAACGTGGAAAGTTCCCAGGTGAAAAGAAAGAAAATGACCGCCCTGATGTATCGGTCTCTCTTTACACAACCAAAGAAAGATTGCCTTGGGCATTCTGATAATATTAGCAAGCCAAATCAGGAAGGTGACAACAGTAGTGGAGCCAAGATTGACGAGTTATCTAAAGGAAGTTGTTCAGATAACAAAGAAGTATCGAAGAACGGTACACTGCCATCGGAAGATGCCACAGCAAAAGAGACCACAGTTGACTCTAGGATTGGCGATAAAAGGTGCCAAAGCAAAGGTGACAATAGTAGTGGAGCCAAGATTGATGAGTTGTCTAAAGGAAGTTGTTCAGACAATGAAGAAGTCTCGAAGAATGGTACACTTCCATTCGAAGATGGGAAAGCAAAAGAAACCAGAGTTGACTCTAGGACCGACGAGCCAAGGTGCCAAAGCAAAGCTGACAACAGTATTGGAGCCAAGATTGATGAGTTATCTAAAGGAAGTTGTTCAGATAATAAAGAAGTCTCAAAGAATGGTACACTGACATCTGAAGATGCCAAAGCAAAAGAGACCAGAGTTAACTCTAGGTTGAGTGGGCCTATGACAGATTTAGCAGAAAATTGTGCGACTCCTGGTTCATTTATACCATCTAACACCCCAACTTATGAGACTAGTGTGGTGCCCAGAAGAGGACAGCCTGATTGCTGCGAAGAGGAGACATTACGAACATTAGTGTCAGGAGATTCTGTATTCGATGATGATGACTTGGTCAGTAACAATGCTGGTCTTGGTGGGGGTGAAAAATTAGCACCTTCTAAGAGAAAGGCAATCACTGTGGACATTGATTCAAATGTTCCTTCCTCATTATCTAAAGGAGACAGAAGCAACTTGATCCCTGATGCTCTCCCTTCAAAACTAGGTGGCAACGAGTCATGTTCCAAACGAATAAGGTTGGATTTTAATCCTACAGCCGAGGAGTCGCGTAACCCATGTGCAACTGAGGACATAGATGTCATTGAGGAAACCGTGCAGCAGAAGGATAAGAGCGACCACGCAAGTGGAACTGGACACCTTAAGGGTAGCACTGTGGAAGACAAAAATATTCATGCTCTTCTTGATGGTCAAAGTGTTGTTCATCCGAAGGAGAAAGTGTCAAGTGATATTGCAAACAGATGCAAGTCGGACTCCTATAAGTTGGTTGAGTATTGGGTTCCTGTACAGATATCTAATGTGCAGCTTGAGCAGTATTGTAATACTTTACTTTCAAATGCTTCATTTCTTTGCTCGTCGCCAAAGATTGATAGTGTTGGGGCCATTCGTGATGTCCTTATTTCAATCCGGAAGTGTTGTAATCATCCCTATATTATTGAAGAATCCCTGCAACCTTTACTACTAAAGGGCCTTGAAGAAGTTGAGTATCCGAGTCAAAAAGAAAAAGCCGTTGCATATCTGAATGTTGGAATAAAAGCAAGTGGCAAGCTTCAACTACTTGATTCAATGCTCACAGAGTTGAGAAAAAATAAATTAAGGGCACTCATACTTTTTCAGCCAATTGGAGTTTCTGGAAAGACTTCAATAGTAGATATTTTGGATGACTTCCTGCGACAAAGATTTGGCGAAGATTCGTATGAAAGAATTGATAATTGTCTTACGGCTTCCAAGAAGCAAGCTGCCACGAAGATATTTAACGACAAGAATAACAAGCGATTTTTCTTTTTGATGGAAACAAGTGCCTGCCATCCTAGCATAAAATTGTCATCAATTGACGCTATTATTATATTTGACAGTGACTGGAACCCGATGAATGATATAAGATCCCTTCAGAAGTTGACACTTGATTCACAGTTTGAATCGATCAAAACATTCCGTTTATATTCACCTTTCACTGTTGAAGAGAAAGCTTTGATTCTCTCTAGGCAAGGTAAGACCCTGGACATCAACTGTCAATCTTCAAGTCGGGGTCTCAGTCATACTCTCTTGATGTGGGGCGCAGTTCATCTTTTTGACGAGTTGAGAGTTTTCCATGACGGTGCAACTTCCACGTCAAATCTAAAACCACTGCTGGAAGAAACAGTTTCACAGTTCTCATCCTGTCTAGCTGATGTTGGTGAAGATTCTGACACAAGCAACTGCTCAATTTTATTGAAAGTCCAGCAACATGGAGGAGCCTACCTTGCAAATTCTCCTTTGTTTGGTGAGCAGGAATTTAGGTCGCCGGATGAAGAGGTACCACAAACGTTTTGGAATAATCTGTTGGTGGGGAGACAGTTTCAATGGAAGTACTCATGTGGTTCATCTCAGCGGAGCCGGAGGAGAGTTCAGCCTTTTAATAATTTGGCAGGTGGGACCGACCATGTGAATGAAGGCACAGCAAAGAAGCGCTTGAAAGTAAGCAACACTAATGTTGATCAGCCTTCATCAAAATCTGTAGGTGAAAAGTTACCCAATGGAATCAAGGCAGGTTAG
Protein sequence

>Msa0338960

MVKSTRSSQKAKDEENNNGRVTRSSEKAKIKAHPNVSDTAGIRKSSREKPSKIIATSSSTQKSEQVEKGTLPAPETRRKSVRVEKMKTPTPSPLTRSGKTRNHSFSGPSDSKSAGSLGSISRQKLQKEKSVKQLTFEAKEVNENEEHNVESSQVKRKKMTALMYRSLFTQPKKDCLGHSDNISKPNQEGDNSSGAKIDELSKGSCSDNKEVSKNGTLPSEDATAKETTVDSRIGDKRCQSKGDNSSGAKIDELSKGSCSDNEEVSKNGTLPFEDGKAKETRVDSRTDEPRCQSKADNSIGAKIDELSKGSCSDNKEVSKNGTLTSEDAKAKETRVNSRLSGPMTDLAENCATPGSFIPSNTPTYETSVVPRRGQPDCCEEETLRTLVSGDSVFDDDDLVSNNAGLGGGEKLAPSKRKAITVDIDSNVPSSLSKGDRSNLIPDALPSKLGGNESCSKRIRLDFNPTAEESRNPCATEDIDVIEETVQQKDKSDHASGTGHLKGSTVEDKNIHALLDGQSVVHPKEKVSSDIANRCKSDSYKLVEYWVPVQISNVQLEQYCNTLLSNASFLCSSPKIDSVGAIRDVLISIRKCCNHPYIIEESLQPLLLKGLEEVEYPSQKEKAVAYLNVGIKASGKLQLLDSMLTELRKNKLRALILFQPIGVSGKTSIVDILDDFLRQRFGEDSYERIDNCLTASKKQAATKIFNDKNNKRFFFLMETSACHPSIKLSSIDAIIIFDSDWNPMNDIRSLQKLTLDSQFESIKTFRLYSPFTVEEKALILSRQGKTLDINCQSSSRGLSHTLLMWGAVHLFDELRVFHDGATSTSNLKPLLEETVSQFSSCLADVGEDSDTSNCSILLKVQQHGGAYLANSPLFGEQEFRSPDEEVPQTFWNNLLVGRQFQWKYSCGSSQRSRRRVQPFNNLAGGTDHVNEGTAKKRLKVSNTNVDQPSSKSVGEKLPNGIKAG*