Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301590 | XP_024632508.1 | 87.398 | 738 | 63 | 6 | 1 | 715 | 1 | 731 | 0.0 | 1257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301590 | sp|Q9M658|MOM1_ARATH | 28.178 | 653 | 340 | 27 | 38 | 659 | 30 | 584 | 3.96e-27 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301590 | A0A396JHY4 | 89.548 | 708 | 22 | 2 | 1 | 658 | 1 | 706 | 0.0 | 1246 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193530 | Msa0301590 | 0.823772 | 1.156668e-53 | -8.615850e-47 |
| Msa0222160 | Msa0301590 | 0.872872 | 2.276340e-67 | -8.615850e-47 |
| Msa0263680 | Msa0301590 | 0.834239 | 3.362132e-56 | -8.615850e-47 |
| Msa0301590 | Msa0338960 | 0.877134 | 8.016738e-69 | -8.615850e-47 |
| Msa0301590 | Msa0467310 | 0.854878 | 9.176715e-62 | -8.615850e-47 |
| Msa0301590 | Msa0478230 | 0.800250 | 1.573901e-48 | -8.615850e-47 |
| Msa0301590 | Msa0566040 | 0.806603 | 7.592995e-50 | -8.615850e-47 |
| Msa0301590 | Msa0582430 | 0.808416 | 3.130550e-50 | -8.615850e-47 |
| Msa0301590 | Msa0658950 | 0.819584 | 1.075599e-52 | -8.615850e-47 |
| Msa0301590 | Msa1067140 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0301590 | Msa1235970 | 0.800685 | 1.283651e-48 | -8.615850e-47 |
| Msa0301590 | Msa1237720 | 0.862558 | 4.655343e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301590 | MtrunA17_Chr2g0327001 | 89.548 | 708 | 22 | 2 | 1 | 658 | 1 | 706 | 0.0 | 1246 |
| Msa0301590 | MtrunA17_Chr7g0264371 | 43.293 | 164 | 71 | 2 | 495 | 658 | 457 | 598 | 5.67e-33 | 137 |
| Msa0301590 | MtrunA17_Chr4g0028821 | 36.364 | 209 | 118 | 5 | 265 | 459 | 33 | 240 | 5.13e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0301590 | AT1G08060.3 | 28.221 | 652 | 339 | 27 | 38 | 658 | 30 | 583 | 3.88e-28 | 122 |
| Msa0301590 | AT1G08060.1 | 28.178 | 653 | 340 | 27 | 38 | 659 | 30 | 584 | 4.02e-28 | 122 |
| Msa0301590 | AT1G08060.2 | 28.178 | 653 | 340 | 27 | 38 | 659 | 30 | 584 | 4.02e-28 | 122 |
Find 167 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGACTTTCTTCTGGTTTC+AGG | 0.121014 | 2_3:-57988511 | None:intergenic |
| GCAATCAGGCTGTCCTCTTC+TGG | 0.160581 | 2_3:-57989714 | None:intergenic |
| CCAATACTCAACCAACTTAT+AGG | 0.217941 | 2_3:-57991576 | None:intergenic |
| GTCAGCAACTTTATGAAGTA+TGG | 0.263738 | 2_3:-57993525 | None:intergenic |
| CTATAAGTTGGTTGAGTATT+GGG | 0.266587 | 2_3:+57991577 | Msa0301590:CDS |
| AATATTCATGCTCTTCTTGA+TGG | 0.282167 | 2_3:+57991488 | Msa0301590:CDS |
| AACACCAAAGTACCTTTCTT+TGG | 0.302134 | 2_3:-57988802 | None:intergenic |
| GTGATTGCCTTTCTCTTAGA+AGG | 0.316007 | 2_3:-57989842 | None:intergenic |
| CGCCAAAGATTGATAGTGTT+GGG | 0.316629 | 2_3:+57991678 | Msa0301590:CDS |
| TACTATTGTCACCTTTGCTT+TGG | 0.322894 | 2_3:-57989319 | None:intergenic |
| ATGCAGTGATTGTCAGATTC+AGG | 0.328298 | 2_3:+57986960 | Msa0301590:five_prime_UTR |
| CTGTTGTCACCTTCCTGATT+TGG | 0.329278 | 2_3:-57989158 | None:intergenic |
| AAGGATGAAGAAAATAATAA+TGG | 0.331335 | 2_3:+57988325 | Msa0301590:CDS |
| GAGGTTGCAATTATCTTTGA+TGG | 0.335688 | 2_3:-57988439 | None:intergenic |
| AGATACCTGTAGTCAATATA+TGG | 0.339212 | 2_3:-57993500 | None:intergenic |
| GAACAATTCAGGGTCGGTTT+TGG | 0.341011 | 2_3:-57986903 | None:intergenic |
| TAACCTTCCGGATTGAAATA+AGG | 0.345295 | 2_3:-57991715 | None:intergenic |
| ACTCTAGGATTGGCGATAAA+AGG | 0.348369 | 2_3:+57989294 | Msa0301590:CDS |
| CAGGGATTCTTCAATAATAT+AGG | 0.350903 | 2_3:-57993285 | None:intergenic |
| TGACAGACGAAGAACAATTC+AGG | 0.353193 | 2_3:-57986914 | None:intergenic |
| TACTGTTGTCAGCTTTGCTT+TGG | 0.353876 | 2_3:-57989478 | None:intergenic |
| TTTAGATAACTCATCAATCT+TGG | 0.356158 | 2_3:-57989507 | None:intergenic |
| CAACAAGTACCTTATTCGTT+TGG | 0.360471 | 2_3:-57989969 | None:intergenic |
| CAATCAGGCTGTCCTCTTCT+GGG | 0.365614 | 2_3:-57989713 | None:intergenic |
| CCTATAAGTTGGTTGAGTAT+TGG | 0.366376 | 2_3:+57991576 | Msa0301590:CDS |
| CCTTTAGTAGTAAAGGTTGC+AGG | 0.367068 | 2_3:-57993304 | None:intergenic |
| TTTAGACAACTCATCAATCT+TGG | 0.367252 | 2_3:-57989348 | None:intergenic |
| AGTCATGTTCCAAACGAATA+AGG | 0.367317 | 2_3:+57989960 | Msa0301590:CDS |
| TTTAGATAACTCGTCAATCT+TGG | 0.373964 | 2_3:-57989189 | None:intergenic |
| GACCCTTACAGACTTTCTTC+TGG | 0.376367 | 2_3:-57988518 | None:intergenic |
| AGGGATTCTTCAATAATATA+GGG | 0.380308 | 2_3:-57993284 | None:intergenic |
| AGCGACCACGCAAGTGGAAC+TGG | 0.390801 | 2_3:+57991349 | Msa0301590:CDS |
| TTTCTTCTGGTTTCAGGAGC+TGG | 0.396574 | 2_3:-57988505 | None:intergenic |
| GCCCCAACACTATCAATCTT+TGG | 0.398218 | 2_3:-57991680 | None:intergenic |
| AAGTGGAACTGGACACCTTA+AGG | 0.400108 | 2_3:+57991360 | Msa0301590:CDS |
| TGGTATCAGAGAGTTACTTA+TGG | 0.401312 | 2_3:-57986883 | None:intergenic |
| CCAGATCTCGTCAAAGGACT+TGG | 0.402758 | 2_3:-57988562 | None:intergenic |
| CCAAGTCCTTTGACGAGATC+TGG | 0.414240 | 2_3:+57988562 | Msa0301590:CDS |
| TCACTTGACACTTTCTCCTT+CGG | 0.414496 | 2_3:-57991527 | None:intergenic |
| GTCAGTAACAATGCTGGTCT+TGG | 0.415618 | 2_3:+57989800 | Msa0301590:CDS |
| TCAGCTTTGCTTTGGCACCT+TGG | 0.418871 | 2_3:-57989470 | None:intergenic |
| TCATAAGTTGGGGTGTTAGA+TGG | 0.419758 | 2_3:-57989677 | None:intergenic |
| TAATATTAGCAAGCCAAATC+AGG | 0.420097 | 2_3:+57989145 | Msa0301590:CDS |
| TCTAAAAGTGCAGGTTCTCT+TGG | 0.425022 | 2_3:+57988622 | Msa0301590:CDS |
| CCACACTAGTCTCATAAGTT+GGG | 0.433671 | 2_3:-57989688 | None:intergenic |
| GTCTCCTCTTCGCAGCAATC+AGG | 0.440266 | 2_3:-57989728 | None:intergenic |
| CCTGCAACCTTTACTACTAA+AGG | 0.445612 | 2_3:+57993304 | Msa0301590:CDS |
| AGTAACAATGCTGGTCTTGG+TGG | 0.447199 | 2_3:+57989803 | Msa0301590:CDS |
| GTTCCTTCCTCATTATCTAA+AGG | 0.450248 | 2_3:+57989884 | Msa0301590:CDS |
| TCAAGGCCCTTTAGTAGTAA+AGG | 0.452061 | 2_3:-57993311 | None:intergenic |
| CTGCAACCTTTACTACTAAA+GGG | 0.460344 | 2_3:+57993305 | Msa0301590:CDS |
| GTAACAATGCTGGTCTTGGT+GGG | 0.464546 | 2_3:+57989804 | Msa0301590:CDS |
| GATGCTCTCCCTTCAAAACT+AGG | 0.466915 | 2_3:+57989929 | Msa0301590:CDS |
| AAGTACTCGTTCTAGTCAAA+AGG | 0.469700 | 2_3:+57988300 | Msa0301590:CDS |
| AGGATGAAGAAAATAATAAT+GGG | 0.471183 | 2_3:+57988326 | Msa0301590:CDS |
| GTCGCATCCCACTGGGCACG+TGG | 0.472311 | 2_3:-57993595 | None:intergenic |
| TAAAGAGAGACCGATACATC+AGG | 0.472782 | 2_3:-57988774 | None:intergenic |
| ACCACACTAGTCTCATAAGT+TGG | 0.474423 | 2_3:-57989689 | None:intergenic |
| GCAGAAAATTGTGCGACTCC+TGG | 0.474505 | 2_3:+57989644 | Msa0301590:CDS |
| TCTGTCTCCTTTAGATAATG+AGG | 0.475981 | 2_3:-57989891 | None:intergenic |
| AAACCAGAAGAAAGTCTGTA+AGG | 0.485038 | 2_3:+57988515 | Msa0301590:CDS |
| TCGGATACTCAACTTCTTCA+AGG | 0.488143 | 2_3:-57993328 | None:intergenic |
| GCCGTTGCATATCTGAATGT+TGG | 0.489341 | 2_3:+57993365 | Msa0301590:CDS |
| GAAGTCTGAGCAAGTAGAGA+AGG | 0.494621 | 2_3:+57988474 | Msa0301590:CDS |
| GGTACACTTCCATTCGAAGA+TGG | 0.495317 | 2_3:+57989407 | Msa0301590:CDS |
| AGCAAAGCTGACAACAGTAT+TGG | 0.495828 | 2_3:+57989482 | Msa0301590:CDS |
| TGCATGGATTGTAACGGAAT+CGG | 0.502489 | 2_3:-57986942 | None:intergenic |
| ATTAGCACCTTCTAAGAGAA+AGG | 0.503047 | 2_3:+57989835 | Msa0301590:CDS |
| TAACAATGCTGGTCTTGGTG+GGG | 0.504302 | 2_3:+57989805 | Msa0301590:CDS |
| GTTACCAAGTCGCATCCCAC+TGG | 0.504624 | 2_3:-57993603 | None:intergenic |
| ACCAGCTGTATCCGATACAT+TGG | 0.507922 | 2_3:-57988392 | None:intergenic |
| AATAAAGAAGTCTCAAAGAA+TGG | 0.509972 | 2_3:+57989545 | Msa0301590:CDS |
| GTGATGTCCTTATTTCAATC+CGG | 0.515336 | 2_3:+57991708 | Msa0301590:CDS |
| GCTTTGGCACCTTGGCTCGT+CGG | 0.516761 | 2_3:-57989462 | None:intergenic |
| TTTGCTGTGGCATCTTCCGA+TGG | 0.516789 | 2_3:-57989257 | None:intergenic |
| TGACGAGATCTGGCAAAACT+AGG | 0.516814 | 2_3:+57988572 | Msa0301590:CDS |
| CCTTCAGATTCTAAAAGTGC+AGG | 0.517278 | 2_3:+57988613 | Msa0301590:CDS |
| AAGATTGATGAGTTGTCTAA+AGG | 0.518469 | 2_3:+57989350 | Msa0301590:CDS |
| AAGATTGATGAGTTATCTAA+AGG | 0.520908 | 2_3:+57989509 | Msa0301590:CDS |
| AACAATGCTGGTCTTGGTGG+GGG | 0.523275 | 2_3:+57989806 | Msa0301590:CDS |
| TATTTCCATATATTGACTAC+AGG | 0.525484 | 2_3:+57993495 | Msa0301590:CDS |
| GCAATTGACATTTGAAGCCA+AGG | 0.529890 | 2_3:+57988687 | Msa0301590:CDS |
| GATCACAAGTCGTGTGGGCA+CGG | 0.531192 | 2_3:-57993662 | None:intergenic |
| AATGAAGAAGTCTCGAAGAA+TGG | 0.531524 | 2_3:+57989386 | Msa0301590:CDS |
| CCAGCTGTATCCGATACATT+GGG | 0.532302 | 2_3:-57988391 | None:intergenic |
| GCTCTTATCCTTCTGCTGCA+CGG | 0.532672 | 2_3:-57991329 | None:intergenic |
| GTACACTTCCATTCGAAGAT+GGG | 0.532964 | 2_3:+57989408 | Msa0301590:CDS |
| TTTGCTTTCCCATCTTCGAA+TGG | 0.533992 | 2_3:-57989416 | None:intergenic |
| AAGATTGACGAGTTATCTAA+AGG | 0.535496 | 2_3:+57989191 | Msa0301590:CDS |
| AAATGACCGCCCTGATGTAT+CGG | 0.537626 | 2_3:+57988764 | Msa0301590:CDS |
| GTGCCCAGTGGGATGCGACT+TGG | 0.540022 | 2_3:+57993599 | Msa0301590:CDS |
| TCGCCAAAGATTGATAGTGT+TGG | 0.541310 | 2_3:+57991677 | Msa0301590:CDS |
| CACCCAACCTCAGTTGCACA+TGG | 0.541372 | 2_3:-57991037 | None:intergenic |
| TCCAACATTCAGATATGCAA+CGG | 0.542893 | 2_3:-57993366 | None:intergenic |
| ACATTACGAACATTAGTGTC+AGG | 0.548962 | 2_3:+57989749 | Msa0301590:CDS |
| CAAGGAAGTGAATGAAAATG+AGG | 0.550037 | 2_3:+57988705 | Msa0301590:CDS |
| CTTTAGTAGTAAAGGTTGCA+GGG | 0.552129 | 2_3:-57993303 | None:intergenic |
| ACCACAGTTGACTCTAGGAT+TGG | 0.555381 | 2_3:+57989284 | Msa0301590:CDS |
| AAAAGCACATCCCAATGTAT+CGG | 0.555771 | 2_3:+57988381 | Msa0301590:CDS |
| GACAGACGAAGAACAATTCA+GGG | 0.557426 | 2_3:-57986913 | None:intergenic |
| TGAGGAAACCGTGCAGCAGA+AGG | 0.559354 | 2_3:+57991321 | Msa0301590:CDS |
| CAAGTCGGACTCCTATAAGT+TGG | 0.564538 | 2_3:+57991565 | Msa0301590:CDS |
| GGTGTCCAGTTCCACTTGCG+TGG | 0.568141 | 2_3:-57991354 | None:intergenic |
| GAGTTAACTCTAGGTTGAGT+GGG | 0.569102 | 2_3:+57989606 | Msa0301590:CDS |
| CTCTTTACACAACCAAAGAA+AGG | 0.572404 | 2_3:+57988790 | Msa0301590:CDS |
| CTCGTCAAAGGACTTGGCGT+TGG | 0.572857 | 2_3:-57988556 | None:intergenic |
| AAGAGACCAGAGTTAACTCT+AGG | 0.573035 | 2_3:+57989597 | Msa0301590:CDS |
| AAGAGACCACAGTTGACTCT+AGG | 0.576346 | 2_3:+57989279 | Msa0301590:CDS |
| TTACGCGACTCCTCGGCTGT+AGG | 0.579110 | 2_3:-57991013 | None:intergenic |
| ACTAGTGTGGTGCCCAGAAG+AGG | 0.581145 | 2_3:+57989701 | Msa0301590:CDS |
| TGCACATTAGATATCTGTAC+AGG | 0.583301 | 2_3:-57991602 | None:intergenic |
| TGTCCTTATTTCAATCCGGA+AGG | 0.583393 | 2_3:+57991712 | Msa0301590:CDS |
| ACTCTAGGACCGACGAGCCA+AGG | 0.584887 | 2_3:+57989453 | Msa0301590:CDS |
| CCCAATGTATCGGATACAGC+TGG | 0.586323 | 2_3:+57988391 | Msa0301590:CDS |
| AAGAAACCAGAGTTGACTCT+AGG | 0.587558 | 2_3:+57989438 | Msa0301590:CDS |
| GACCAGGATCACAAGTCGTG+TGG | 0.590337 | 2_3:-57993668 | None:intergenic |
| GATAAGAGCGACCACGCAAG+TGG | 0.596892 | 2_3:+57991343 | Msa0301590:CDS |
| AGAGTTAACTCTAGGTTGAG+TGG | 0.600517 | 2_3:+57989605 | Msa0301590:CDS |
| GACGAAGAACAATTCAGGGT+CGG | 0.601333 | 2_3:-57986909 | None:intergenic |
| TCATAGAACCATAAAATCGA+AGG | 0.603957 | 2_3:-57993629 | None:intergenic |
| ACATGGGTTACGCGACTCCT+CGG | 0.605052 | 2_3:-57991020 | None:intergenic |
| AACCAGAAGAAAGTCTGTAA+GGG | 0.606060 | 2_3:+57988516 | Msa0301590:CDS |
| TCGTTCTAGTCAAAAGGCCA+AGG | 0.606585 | 2_3:+57988306 | Msa0301590:CDS |
| AAGTCTGAGCAAGTAGAGAA+GGG | 0.606860 | 2_3:+57988475 | Msa0301590:CDS |
| GACTTGGTCAGTAACAATGC+TGG | 0.607747 | 2_3:+57989794 | Msa0301590:CDS |
| TTACCAAGTCGCATCCCACT+GGG | 0.609094 | 2_3:-57993602 | None:intergenic |
| AGCAAAGGTGACAATAGTAG+TGG | 0.610934 | 2_3:+57989323 | Msa0301590:CDS |
| TGAAATAAGGACATCACGAA+TGG | 0.611007 | 2_3:-57991702 | None:intergenic |
| ATGAAGAAAATAATAATGGG+AGG | 0.613173 | 2_3:+57988329 | Msa0301590:CDS |
| TGTATTCGATGATGATGACT+TGG | 0.613466 | 2_3:+57989778 | Msa0301590:CDS |
| ACACAACGTGGAAAGTTCCC+AGG | 0.615041 | 2_3:+57988729 | Msa0301590:CDS |
| GATAAAAGGTGCCAAAGCAA+AGG | 0.615375 | 2_3:+57989308 | Msa0301590:CDS |
| AATGTTGGAATAAAAGCAAG+TGG | 0.615384 | 2_3:+57993380 | Msa0301590:CDS |
| CAGGAAGGTGACAACAGTAG+TGG | 0.619959 | 2_3:+57989164 | Msa0301590:CDS |
| TGAAGAAAATAATAATGGGA+GGG | 0.620771 | 2_3:+57988330 | Msa0301590:CDS |
| TGAATCTGACAATCACTGCA+TGG | 0.620839 | 2_3:-57986958 | None:intergenic |
| ACTTGACCCACGTGCCCAGT+GGG | 0.621918 | 2_3:+57993588 | Msa0301590:CDS |
| GCCAAAGATTGATAGTGTTG+GGG | 0.622298 | 2_3:+57991679 | Msa0301590:CDS |
| GTCGGTCCTAGAGTCAACTC+TGG | 0.624776 | 2_3:-57989444 | None:intergenic |
| TCTCCTTTAGATAATGAGGA+AGG | 0.625074 | 2_3:-57989887 | None:intergenic |
| AGACTTCTGAGTACTTGAAG+AGG | 0.628177 | 2_3:-57988458 | None:intergenic |
| GAAGAACGGTACACTGCCAT+CGG | 0.629096 | 2_3:+57989241 | Msa0301590:CDS |
| AACAAAGAAGTATCGAAGAA+CGG | 0.629825 | 2_3:+57989227 | Msa0301590:CDS |
| AATCACTGCATGGATTGTAA+CGG | 0.630967 | 2_3:-57986948 | None:intergenic |
| ACCAGGATCACAAGTCGTGT+GGG | 0.632006 | 2_3:-57993667 | None:intergenic |
| TCAAAGTGTTGTTCATCCGA+AGG | 0.632497 | 2_3:+57991511 | Msa0301590:CDS |
| CACACTAGTCTCATAAGTTG+GGG | 0.632819 | 2_3:-57989687 | None:intergenic |
| TCAGGACATAGATGTCATTG+AGG | 0.637473 | 2_3:+57991303 | Msa0301590:intron |
| ATTAGCAAGCCAAATCAGGA+AGG | 0.637512 | 2_3:+57989149 | Msa0301590:CDS |
| TAATATTATCAGAATGCCCA+AGG | 0.640296 | 2_3:-57989130 | None:intergenic |
| AAAGAGAGACCGATACATCA+GGG | 0.640898 | 2_3:-57988773 | None:intergenic |
| TACTTGACCCACGTGCCCAG+TGG | 0.641248 | 2_3:+57993587 | Msa0301590:CDS |
| ACAGCCTGATTGCTGCGAAG+AGG | 0.646179 | 2_3:+57989724 | Msa0301590:CDS |
| GCGTAACCCATGTGCAACTG+AGG | 0.653540 | 2_3:+57991030 | Msa0301590:CDS |
| TATTGCAAACAGATGCAAGT+CGG | 0.667548 | 2_3:+57991550 | Msa0301590:CDS |
| TTAGATGGTATAAATGAACC+AGG | 0.668025 | 2_3:-57989662 | None:intergenic |
| TGAAAATGAGGAACACAACG+TGG | 0.669394 | 2_3:+57988717 | Msa0301590:CDS |
| ACTCAACCTAGAGTTAACTC+TGG | 0.670792 | 2_3:-57989603 | None:intergenic |
| TCGCATCCCACTGGGCACGT+GGG | 0.673623 | 2_3:-57993594 | None:intergenic |
| ACCCAACCTCAGTTGCACAT+GGG | 0.679197 | 2_3:-57991036 | None:intergenic |
| TAAGAGAAAGGCAATCACAG+TGG | 0.702136 | 2_3:+57989847 | Msa0301590:CDS |
| GGGATTTCAGGGTAGCACTG+TGG | 0.703298 | 2_3:+57991457 | Msa0301590:intron |
| GCCAATCCTAGAGTCAACTG+TGG | 0.706585 | 2_3:-57989285 | None:intergenic |
| GCTCTCCCTTCAAAACTAGG+TGG | 0.706794 | 2_3:+57989932 | Msa0301590:CDS |
| CACAAGTCGTGTGGGCACGG+CGG | 0.708849 | 2_3:-57993659 | None:intergenic |
| CCCAACTTATGAGACTAGTG+TGG | 0.722871 | 2_3:+57989688 | Msa0301590:CDS |
| GAGAGACCGATACATCAGGG+CGG | 0.804578 | 2_3:-57988770 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTATTTATTTTTATG+AGG | + | chr2_3:57990062-57990081 | Msa0301590:intron | 10.0% |
| !! | AAAAAAAAAAAAAAATCAGA+CGG | - | chr2_3:57990124-57990143 | None:intergenic | 10.0% |
| !! | CATATAAAAATGTAAATATA+TGG | + | chr2_3:57990863-57990882 | Msa0301590:intron | 10.0% |
| !!! | TAACAAATTTTAAGTAAATT+GGG | - | chr2_3:57991096-57991115 | None:intergenic | 10.0% |
| !!! | TATTTTGATTTTAAAATTTG+GGG | + | chr2_3:57992953-57992972 | Msa0301590:intron | 10.0% |
| !!! | ATTGCATGATATTATTTTTT+AGG | + | chr2_3:57987269-57987288 | Msa0301590:intron | 15.0% |
| !!! | TTGCATGATATTATTTTTTA+GGG | + | chr2_3:57987270-57987289 | Msa0301590:intron | 15.0% |
| !! | ACACATTATATTAAAATTCA+AGG | - | chr2_3:57987509-57987528 | None:intergenic | 15.0% |
| !! | AACATCAAATAATAAATTCT+AGG | - | chr2_3:57987827-57987846 | None:intergenic | 15.0% |
| !!! | AAATTTTTTATTTAAGCCAA+TGG | + | chr2_3:57988273-57988292 | Msa0301590:exon | 15.0% |
| !!! | TTATTTATTTTTATGAGGTT+TGG | + | chr2_3:57990067-57990086 | Msa0301590:intron | 15.0% |
| !! | CTATTTAATATTCAAATTCA+TGG | + | chr2_3:57990184-57990203 | Msa0301590:intron | 15.0% |
| !! | TGAGTAAAAAATAATCAAAA+AGG | - | chr2_3:57990286-57990305 | None:intergenic | 15.0% |
| !! | AATCAAATATAGTATTAACA+AGG | - | chr2_3:57990412-57990431 | None:intergenic | 15.0% |
| !!! | AACAAATTTTAAGTAAATTG+GGG | - | chr2_3:57991095-57991114 | None:intergenic | 15.0% |
| !!! | GTAACAAATTTTAAGTAAAT+TGG | - | chr2_3:57991097-57991116 | None:intergenic | 15.0% |
| !!! | TACTTAAAATTTGTTACAAA+AGG | + | chr2_3:57991100-57991119 | Msa0301590:intron | 15.0% |
| !!! | ACTTAAAATTTGTTACAAAA+GGG | + | chr2_3:57991101-57991120 | Msa0301590:intron | 15.0% |
| !!! | AGAAATACTGATTTTATTTT+TGG | - | chr2_3:57992996-57993015 | None:intergenic | 15.0% |
| !! | AAAAATGTTAAATCAAAACA+TGG | - | chr2_3:57993057-57993076 | None:intergenic | 15.0% |
| !! | AGTTGAGAAAAAATAAATTA+AGG | + | chr2_3:57993435-57993454 | Msa0301590:CDS | 15.0% |
| !! | GTTGAGAAAAAATAAATTAA+GGG | + | chr2_3:57993436-57993455 | Msa0301590:CDS | 15.0% |
| !!! | TGTTATTTTCATTGAGAAAA+GGG | - | chr2_3:57986863-57986882 | None:intergenic | 20.0% |
| !! | AATGTATGTAGAAAAATTGA+CGG | - | chr2_3:57987139-57987158 | None:intergenic | 20.0% |
| !!! | ATTATGTAAAATTGAGTTGA+AGG | + | chr2_3:57987608-57987627 | Msa0301590:intron | 20.0% |
| !!! | AATCAGAAGCTATAATTTTT+AGG | + | chr2_3:57987683-57987702 | Msa0301590:intron | 20.0% |
| !! | GGTTCAAATAAAATCAATTA+TGG | + | chr2_3:57987704-57987723 | Msa0301590:intron | 20.0% |
| !! | TCAAATAAAATCAATTATGG+AGG | + | chr2_3:57987707-57987726 | Msa0301590:intron | 20.0% |
| !!! | AGAATTGATTTTAACATGTT+TGG | - | chr2_3:57987760-57987779 | None:intergenic | 20.0% |
| !! | CAAATAATAAATTCTAGGTT+TGG | - | chr2_3:57987822-57987841 | None:intergenic | 20.0% |
| !!! | GGTAAAAGAAGATTTTAATT+TGG | - | chr2_3:57988010-57988029 | None:intergenic | 20.0% |
| !!! | ATTATTATTTTCTTCATCCT+TGG | - | chr2_3:57988326-57988345 | None:intergenic | 20.0% |
| !! | AAGGATGAAGAAAATAATAA+TGG | + | chr2_3:57988325-57988344 | Msa0301590:CDS | 20.0% |
| !! | AGGATGAAGAAAATAATAAT+GGG | + | chr2_3:57988326-57988345 | Msa0301590:CDS | 20.0% |
| !! | ATTTGTATTACATTTGGATT+TGG | - | chr2_3:57988892-57988911 | None:intergenic | 20.0% |
| !! | CATATCAAATTTATTAGAAG+TGG | + | chr2_3:57989023-57989042 | Msa0301590:intron | 20.0% |
| !! | AAAATCAAGCAATCAAAAAA+TGG | - | chr2_3:57989103-57989122 | None:intergenic | 20.0% |
| !!! | GAATTCATTGTTCAATTTTT+TGG | + | chr2_3:57990030-57990049 | Msa0301590:intron | 20.0% |
| !! | AAATAATCAAAAAGGACAAA+AGG | - | chr2_3:57990278-57990297 | None:intergenic | 20.0% |
| !!! | TACAAAAATGTTTTTCAAGT+TGG | + | chr2_3:57990771-57990790 | Msa0301590:intron | 20.0% |
| !!! | TTTTTCAAGTTGGATAATTT+TGG | + | chr2_3:57990781-57990800 | Msa0301590:intron | 20.0% |
| !!! | ACAAATTTTAAGTAAATTGG+GGG | - | chr2_3:57991094-57991113 | None:intergenic | 20.0% |
| !!! | TGTTGCTAATTTTGATTTAA+GGG | - | chr2_3:57991203-57991222 | None:intergenic | 20.0% |
| !!! | ATGTTGCTAATTTTGATTTA+AGG | - | chr2_3:57991204-57991223 | None:intergenic | 20.0% |
| !!! | ATTTCTTTGTATCTTTTCAT+TGG | + | chr2_3:57991278-57991297 | Msa0301590:intron | 20.0% |
| !! | ATTTGGTTAGTACAATATAT+TGG | + | chr2_3:57991827-57991846 | Msa0301590:intron | 20.0% |
| !! | TCCTTTATTATTAGATTAGA+TGG | + | chr2_3:57991857-57991876 | Msa0301590:intron | 20.0% |
| !! | ACCATCTAATCTAATAATAA+AGG | - | chr2_3:57991861-57991880 | None:intergenic | 20.0% |
| !!! | ATTCCTCTAAAAAATATACA+GGG | - | chr2_3:57992413-57992432 | None:intergenic | 20.0% |
| !!! | AATTCCTCTAAAAAATATAC+AGG | - | chr2_3:57992414-57992433 | None:intergenic | 20.0% |
| !!! | GATTTTTCAAAGTTTGATTA+AGG | - | chr2_3:57992739-57992758 | None:intergenic | 20.0% |
| !!! | TATTTTGGTATAGAGATTAT+GGG | - | chr2_3:57992822-57992841 | None:intergenic | 20.0% |
| !!! | ATATTTTGGTATAGAGATTA+TGG | - | chr2_3:57992823-57992842 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTTGGCAAAAAG+GGG | - | chr2_3:57992986-57993005 | None:intergenic | 20.0% |
| !!! | GATTTTATTTTTGGCAAAAA+GGG | - | chr2_3:57992987-57993006 | None:intergenic | 20.0% |
| !!! | TGATTTTATTTTTGGCAAAA+AGG | - | chr2_3:57992988-57993007 | None:intergenic | 20.0% |
| !!! | TTTCTCATTTTAATTGTTGA+TGG | + | chr2_3:57993011-57993030 | Msa0301590:intron | 20.0% |
| !!! | TTCTCATTTTAATTGTTGAT+GGG | + | chr2_3:57993012-57993031 | Msa0301590:intron | 20.0% |
| !!! | ATGTGTTTTAATTAGTTGTT+TGG | + | chr2_3:57993093-57993112 | Msa0301590:intron | 20.0% |
| !!! | TATTGTGTTTTTCTATTACT+GGG | + | chr2_3:57993559-57993578 | Msa0301590:CDS | 20.0% |
| !!! | GTGTTATTTTCATTGAGAAA+AGG | - | chr2_3:57986864-57986883 | None:intergenic | 25.0% |
| !!! | ATTTCTTCTATCACTGATTT+AGG | + | chr2_3:57987059-57987078 | Msa0301590:intron | 25.0% |
| !!! | TTTCTTCTATCACTGATTTA+GGG | + | chr2_3:57987060-57987079 | Msa0301590:intron | 25.0% |
| ! | TAGCAATCACATAAACAAAA+CGG | - | chr2_3:57987164-57987183 | None:intergenic | 25.0% |
| !!! | TTGATGATGCTAATTTTCAA+TGG | + | chr2_3:57987231-57987250 | Msa0301590:intron | 25.0% |
| ! | ACGAAATTATAGATATTCAC+TGG | - | chr2_3:57987314-57987333 | None:intergenic | 25.0% |
| !! | GTTTTTACTTTATGTATGCT+TGG | + | chr2_3:57987550-57987569 | Msa0301590:intron | 25.0% |
| ! | TCAGTGAGAAAATTTAGTTA+TGG | + | chr2_3:57987577-57987596 | Msa0301590:intron | 25.0% |
| ! | CAGTGAGAAAATTTAGTTAT+GGG | + | chr2_3:57987578-57987597 | Msa0301590:intron | 25.0% |
| ! | ATGGAGATTGATATATTCTT+TGG | + | chr2_3:57987895-57987914 | Msa0301590:intron | 25.0% |
| !! | TATTTTCTCAAGTTACTCAA+GGG | - | chr2_3:57987977-57987996 | None:intergenic | 25.0% |
| !! | ATATTTTCTCAAGTTACTCA+AGG | - | chr2_3:57987978-57987997 | None:intergenic | 25.0% |
| ! | AGTAACTTGAGAAAATATTG+AGG | + | chr2_3:57987980-57987999 | Msa0301590:intron | 25.0% |
| !! | TTAAAATCTTCTTTTACCAG+TGG | + | chr2_3:57988012-57988031 | Msa0301590:intron | 25.0% |
| ! | ATAATAACAATATTTGCCAC+TGG | - | chr2_3:57988031-57988050 | None:intergenic | 25.0% |
| !! | ATGAAGAAAATAATAATGGG+AGG | + | chr2_3:57988329-57988348 | Msa0301590:CDS | 25.0% |
| !! | TGAAGAAAATAATAATGGGA+GGG | + | chr2_3:57988330-57988349 | Msa0301590:CDS | 25.0% |
| ! | ACAACGATTTGTATTACATT+TGG | - | chr2_3:57988898-57988917 | None:intergenic | 25.0% |
| !! | ACAAATCGTTGTTAATTTGA+TGG | + | chr2_3:57988906-57988925 | Msa0301590:intron | 25.0% |
| ! | TTTAGATAACTCATCAATCT+TGG | - | chr2_3:57989510-57989529 | None:intergenic | 25.0% |
| ! | AAGATTGATGAGTTATCTAA+AGG | + | chr2_3:57989509-57989528 | Msa0301590:CDS | 25.0% |
| ! | AATAAAGAAGTCTCAAAGAA+TGG | + | chr2_3:57989545-57989564 | Msa0301590:CDS | 25.0% |
| !!! | ATAAGGTACTTGTTGTTAAA+TGG | + | chr2_3:57989977-57989996 | Msa0301590:intron | 25.0% |
| !! | TTTTACTCAACATGTTTGTT+TGG | + | chr2_3:57990297-57990316 | Msa0301590:intron | 25.0% |
| ! | TTGAGAAAGAGAAAAAAAAG+AGG | + | chr2_3:57990438-57990457 | Msa0301590:intron | 25.0% |
| ! | ACATAGGTAATTTAAACGAA+TGG | + | chr2_3:57990467-57990486 | Msa0301590:intron | 25.0% |
| ! | AAACTCTAATCCTTACTTAT+AGG | + | chr2_3:57990557-57990576 | Msa0301590:intron | 25.0% |
| ! | AACTCTAATCCTTACTTATA+GGG | + | chr2_3:57990558-57990577 | Msa0301590:intron | 25.0% |
| !! | CTTGATTTCCTTGTTTATTT+AGG | - | chr2_3:57990599-57990618 | None:intergenic | 25.0% |
| ! | CCTTGAAAAGTTACAAAAAT+TGG | - | chr2_3:57990817-57990836 | None:intergenic | 25.0% |
| !! | CCAATTTTTGTAACTTTTCA+AGG | + | chr2_3:57990814-57990833 | Msa0301590:intron | 25.0% |
| !!! | AAATTTTAAGTAAATTGGGG+GGG | - | chr2_3:57991092-57991111 | None:intergenic | 25.0% |
| !!! | CAAATTTTAAGTAAATTGGG+GGG | - | chr2_3:57991093-57991112 | None:intergenic | 25.0% |
| !!! | CATTTATTTCTGTTCATTTG+TGG | + | chr2_3:57991245-57991264 | Msa0301590:intron | 25.0% |
| ! | ATCAAAAGAAACAAACCTTA+AGG | - | chr2_3:57991378-57991397 | None:intergenic | 25.0% |
| !!! | GTTTGTTTCTTTTGATGTAT+AGG | + | chr2_3:57991382-57991401 | Msa0301590:intron | 25.0% |
| !! | TTTCTTTTGATGTATAGGTT+TGG | + | chr2_3:57991387-57991406 | Msa0301590:intron | 25.0% |
| ! | AAATCCCAGTAGAATTAAAT+AGG | - | chr2_3:57991444-57991463 | None:intergenic | 25.0% |
| ! | TATATTGTACTAACCAAATG+CGG | - | chr2_3:57991826-57991845 | None:intergenic | 25.0% |
| ! | AAGTTGGATAAAGTCTATTT+AGG | - | chr2_3:57992047-57992066 | None:intergenic | 25.0% |
| ! | ACGTTGAGTTTAGATAAAAT+CGG | + | chr2_3:57992107-57992126 | Msa0301590:intron | 25.0% |
| ! | ACAAATAAAATCTCACTACT+AGG | - | chr2_3:57992226-57992245 | None:intergenic | 25.0% |
| ! | AGTTTGATTAAGGATGATTT+CGG | - | chr2_3:57992729-57992748 | None:intergenic | 25.0% |
| ! | TATATAAAGATATCACACTC+AGG | - | chr2_3:57992850-57992869 | None:intergenic | 25.0% |
| ! | GAGTGTGATATCTTTATATA+TGG | + | chr2_3:57992850-57992869 | Msa0301590:intron | 25.0% |
| ! | CTAAAAAGTAGAGAAATACT+CGG | - | chr2_3:57993147-57993166 | None:intergenic | 25.0% |
| !!! | CTACTTTTTAGTAGTTGATA+TGG | + | chr2_3:57993156-57993175 | Msa0301590:intron | 25.0% |
| ! | AGGGATTCTTCAATAATATA+GGG | - | chr2_3:57993287-57993306 | None:intergenic | 25.0% |
| !! | TATTTCCATATATTGACTAC+AGG | + | chr2_3:57993495-57993514 | Msa0301590:CDS | 25.0% |
| !! | AAAACACAATAGTGTTTTTC+AGG | - | chr2_3:57993550-57993569 | None:intergenic | 25.0% |
| !! | CTATTGTGTTTTTCTATTAC+TGG | + | chr2_3:57993558-57993577 | Msa0301590:CDS | 25.0% |
| ATTTCGAAGCAAAACGAATA+CGG | - | chr2_3:57987092-57987111 | None:intergenic | 30.0% | |
| ! | TAATTTGCACGACTAAAAAG+TGG | - | chr2_3:57987352-57987371 | None:intergenic | 30.0% |
| !!! | TACACCTCTAGAATCAATTT+TGG | + | chr2_3:57987779-57987798 | Msa0301590:intron | 30.0% |
| TCTGAAGGATTCATGTAATT+AGG | + | chr2_3:57987855-57987874 | Msa0301590:intron | 30.0% | |
| AAGGATTCATGTAATTAGGT+TGG | + | chr2_3:57987859-57987878 | Msa0301590:intron | 30.0% | |
| !!! | GGTTGGAGTTTTTTTTGTTA+TGG | + | chr2_3:57987876-57987895 | Msa0301590:intron | 30.0% |
| ! | ATTTTCTCAAGTTACTCAAG+GGG | - | chr2_3:57987976-57987995 | None:intergenic | 30.0% |
| ! | ACTAGGAATCATTCTTTTTC+TGG | + | chr2_3:57988589-57988608 | Msa0301590:CDS | 30.0% |
| ! | CATTTTCTTTCTTTTCACCT+GGG | - | chr2_3:57988749-57988768 | None:intergenic | 30.0% |
| ! | TCATTTTCTTTCTTTTCACC+TGG | - | chr2_3:57988750-57988769 | None:intergenic | 30.0% |
| !!! | TGGACATTTTTTTTCGAGTA+AGG | + | chr2_3:57989043-57989062 | Msa0301590:intron | 30.0% |
| TAATATTATCAGAATGCCCA+AGG | - | chr2_3:57989133-57989152 | None:intergenic | 30.0% | |
| TAATATTAGCAAGCCAAATC+AGG | + | chr2_3:57989145-57989164 | Msa0301590:CDS | 30.0% | |
| TTTAGATAACTCGTCAATCT+TGG | - | chr2_3:57989192-57989211 | None:intergenic | 30.0% | |
| AAGATTGACGAGTTATCTAA+AGG | + | chr2_3:57989191-57989210 | Msa0301590:CDS | 30.0% | |
| !! | AACAAAGAAGTATCGAAGAA+CGG | + | chr2_3:57989227-57989246 | Msa0301590:CDS | 30.0% |
| TTTAGACAACTCATCAATCT+TGG | - | chr2_3:57989351-57989370 | None:intergenic | 30.0% | |
| AAGATTGATGAGTTGTCTAA+AGG | + | chr2_3:57989350-57989369 | Msa0301590:CDS | 30.0% | |
| ! | TTTTCTGCTAAATCTGTCAT+AGG | - | chr2_3:57989632-57989651 | None:intergenic | 30.0% |
| TTAGATGGTATAAATGAACC+AGG | - | chr2_3:57989665-57989684 | None:intergenic | 30.0% | |
| TGTTGTTAAATGGCAGTAAA+TGG | + | chr2_3:57989987-57990006 | Msa0301590:intron | 30.0% | |
| TAATCAAAAAGGACAAAAGG+TGG | - | chr2_3:57990275-57990294 | None:intergenic | 30.0% | |
| ! | AAAAAAGAGGAAGCATACAT+AGG | + | chr2_3:57990451-57990470 | Msa0301590:intron | 30.0% |
| ! | TTGATAATAGCATGATACGA+AGG | + | chr2_3:57990531-57990550 | Msa0301590:intron | 30.0% |
| TCTATCTATCCCTATAAGTA+AGG | - | chr2_3:57990570-57990589 | None:intergenic | 30.0% | |
| CACACATATTATAATGAACC+AGG | + | chr2_3:57990712-57990731 | Msa0301590:intron | 30.0% | |
| TGAACAGATCAACAGATAAA+GGG | - | chr2_3:57990921-57990940 | None:intergenic | 30.0% | |
| ATGAACAGATCAACAGATAA+AGG | - | chr2_3:57990922-57990941 | None:intergenic | 30.0% | |
| TTATCTGTTGATCTGTTCAT+TGG | + | chr2_3:57990922-57990941 | Msa0301590:intron | 30.0% | |
| !! | AATTTTAAGTAAATTGGGGG+GGG | - | chr2_3:57991091-57991110 | None:intergenic | 30.0% |
| !! | ACAAAACACATTTGAGTTGA+GGG | - | chr2_3:57991419-57991438 | None:intergenic | 30.0% |
| !! | AACAAAACACATTTGAGTTG+AGG | - | chr2_3:57991420-57991439 | None:intergenic | 30.0% |
| TGTTGCCTATTTAATTCTAC+TGG | + | chr2_3:57991436-57991455 | Msa0301590:intron | 30.0% | |
| GTTGCCTATTTAATTCTACT+GGG | + | chr2_3:57991437-57991456 | Msa0301590:intron | 30.0% | |
| TTTAATTCTACTGGGATTTC+AGG | + | chr2_3:57991445-57991464 | Msa0301590:intron | 30.0% | |
| TTAATTCTACTGGGATTTCA+GGG | + | chr2_3:57991446-57991465 | Msa0301590:intron | 30.0% | |
| AATATTCATGCTCTTCTTGA+TGG | + | chr2_3:57991488-57991507 | Msa0301590:CDS | 30.0% | |
| !! | CTATAAGTTGGTTGAGTATT+GGG | + | chr2_3:57991577-57991596 | Msa0301590:CDS | 30.0% |
| !!! | TTCGCTCTAGTTTTTAGTTA+GGG | - | chr2_3:57992378-57992397 | None:intergenic | 30.0% |
| !!! | ATTCGCTCTAGTTTTTAGTT+AGG | - | chr2_3:57992379-57992398 | None:intergenic | 30.0% |
| ACTAAAAACTAGAGCGAATT+TGG | + | chr2_3:57992380-57992399 | Msa0301590:intron | 30.0% | |
| !!! | CAACCCTGTATATTTTTTAG+AGG | + | chr2_3:57992407-57992426 | Msa0301590:intron | 30.0% |
| ATCTACAACGAATGAAAATC+AGG | + | chr2_3:57992516-57992535 | Msa0301590:intron | 30.0% | |
| AAAAAACAGCACTACTTACT+TGG | + | chr2_3:57992684-57992703 | Msa0301590:intron | 30.0% | |
| TCAAAATATACGGTAAGCAA+TGG | - | chr2_3:57992941-57992960 | None:intergenic | 30.0% | |
| GGAGTTAATTGAAAGAGTAA+AGG | - | chr2_3:57993186-57993205 | None:intergenic | 30.0% | |
| CAGGGATTCTTCAATAATAT+AGG | - | chr2_3:57993288-57993307 | None:intergenic | 30.0% | |
| AATGTTGGAATAAAAGCAAG+TGG | + | chr2_3:57993380-57993399 | Msa0301590:CDS | 30.0% | |
| AGATACCTGTAGTCAATATA+TGG | - | chr2_3:57993503-57993522 | None:intergenic | 30.0% | |
| TCATAGAACCATAAAATCGA+AGG | - | chr2_3:57993632-57993651 | None:intergenic | 30.0% | |
| !! | GATTTTATGGTTCTATGAGA+CGG | + | chr2_3:57993634-57993653 | Msa0301590:CDS | 30.0% |
| TGGTATCAGAGAGTTACTTA+TGG | - | chr2_3:57986886-57986905 | None:intergenic | 35.0% | |
| ! | AATCACTGCATGGATTGTAA+CGG | - | chr2_3:57986951-57986970 | None:intergenic | 35.0% |
| TTACGCTTTCTCTCTCTATA+AGG | + | chr2_3:57987022-57987041 | Msa0301590:intron | 35.0% | |
| !!! | GTAGTTTTAGTCTCTTCCTA+CGG | + | chr2_3:57987380-57987399 | Msa0301590:intron | 35.0% |
| !!! | ACACGTGGTTTTGTAATTTG+CGG | + | chr2_3:57987414-57987433 | Msa0301590:intron | 35.0% |
| ! | AGAGCCAAAATTGATTCTAG+AGG | - | chr2_3:57987786-57987805 | None:intergenic | 35.0% |
| !!! | AATTTTGGCTCTTCCAAAAG+TGG | + | chr2_3:57987794-57987813 | Msa0301590:intron | 35.0% |
| !! | TGATGTTGATTTGTGTCTGA+AGG | + | chr2_3:57987840-57987859 | Msa0301590:intron | 35.0% |
| AGTACACATTCCTTTGTAGT+TGG | + | chr2_3:57988127-57988146 | Msa0301590:intron | 35.0% | |
| ! | TTCCTTTGTAGTTGGTACTA+TGG | + | chr2_3:57988135-57988154 | Msa0301590:intron | 35.0% |
| GATATCTGCGTATTGTATGT+TGG | + | chr2_3:57988197-57988216 | Msa0301590:intron | 35.0% | |
| !! | GAACGAGTACTTTTTACCAT+TGG | - | chr2_3:57988292-57988311 | None:intergenic | 35.0% |
| AAGTACTCGTTCTAGTCAAA+AGG | + | chr2_3:57988300-57988319 | Msa0301590:CDS | 35.0% | |
| ! | AAAAGCACATCCCAATGTAT+CGG | + | chr2_3:57988381-57988400 | Msa0301590:CDS | 35.0% |
| GAGGTTGCAATTATCTTTGA+TGG | - | chr2_3:57988442-57988461 | None:intergenic | 35.0% | |
| AAACCAGAAGAAAGTCTGTA+AGG | + | chr2_3:57988515-57988534 | Msa0301590:CDS | 35.0% | |
| AACCAGAAGAAAGTCTGTAA+GGG | + | chr2_3:57988516-57988535 | Msa0301590:CDS | 35.0% | |
| ! | CTCATTTTCATTCACTTCCT+TGG | - | chr2_3:57988707-57988726 | None:intergenic | 35.0% |
| CAAGGAAGTGAATGAAAATG+AGG | + | chr2_3:57988705-57988724 | Msa0301590:CDS | 35.0% | |
| CTCTTTACACAACCAAAGAA+AGG | + | chr2_3:57988790-57988809 | Msa0301590:CDS | 35.0% | |
| !! | ACAACCAAAGAAAGGTACTT+TGG | + | chr2_3:57988798-57988817 | Msa0301590:intron | 35.0% |
| ! | AACACCAAAGTACCTTTCTT+TGG | - | chr2_3:57988805-57988824 | None:intergenic | 35.0% |
| ! | CTTGATTTTCAGATTGCCTT+GGG | + | chr2_3:57989114-57989133 | Msa0301590:intron | 35.0% |
| TACTATTGTCACCTTTGCTT+TGG | - | chr2_3:57989322-57989341 | None:intergenic | 35.0% | |
| AATGAAGAAGTCTCGAAGAA+TGG | + | chr2_3:57989386-57989405 | Msa0301590:CDS | 35.0% | |
| ACATTACGAACATTAGTGTC+AGG | + | chr2_3:57989749-57989768 | Msa0301590:CDS | 35.0% | |
| ! | TGTATTCGATGATGATGACT+TGG | + | chr2_3:57989778-57989797 | Msa0301590:CDS | 35.0% |
| ! | ATTAGCACCTTCTAAGAGAA+AGG | + | chr2_3:57989835-57989854 | Msa0301590:CDS | 35.0% |
| GTTCCTTCCTCATTATCTAA+AGG | + | chr2_3:57989884-57989903 | Msa0301590:CDS | 35.0% | |
| TCTCCTTTAGATAATGAGGA+AGG | - | chr2_3:57989890-57989909 | None:intergenic | 35.0% | |
| TCTGTCTCCTTTAGATAATG+AGG | - | chr2_3:57989894-57989913 | None:intergenic | 35.0% | |
| AGTCATGTTCCAAACGAATA+AGG | + | chr2_3:57989960-57989979 | Msa0301590:CDS | 35.0% | |
| CAACAAGTACCTTATTCGTT+TGG | - | chr2_3:57989972-57989991 | None:intergenic | 35.0% | |
| AATCAGACGGTTTGATATAG+AGG | - | chr2_3:57990111-57990130 | None:intergenic | 35.0% | |
| ACTCAACATGTTTGTTTGGA+TGG | + | chr2_3:57990301-57990320 | Msa0301590:intron | 35.0% | |
| AGCTCGCAAGAATAAACAAT+AGG | - | chr2_3:57990333-57990352 | None:intergenic | 35.0% | |
| CTTATAGGGATAGATAGACT+TGG | + | chr2_3:57990572-57990591 | Msa0301590:intron | 35.0% | |
| ! | GACTTGGTCCTAAATAAACA+AGG | + | chr2_3:57990588-57990607 | Msa0301590:intron | 35.0% |
| ! | TCCTTAAAGTTGACTCAGTA+TGG | + | chr2_3:57990666-57990685 | Msa0301590:intron | 35.0% |
| ACCATACTGAGTCAACTTTA+AGG | - | chr2_3:57990670-57990689 | None:intergenic | 35.0% | |
| ! | AAAGTTGACTCAGTATGGTT+AGG | + | chr2_3:57990671-57990690 | Msa0301590:intron | 35.0% |
| ! | TATGGGCGAAATATTTTGCT+AGG | + | chr2_3:57990881-57990900 | Msa0301590:intron | 35.0% |
| CATTGGCACTTTGACATATT+AGG | + | chr2_3:57990939-57990958 | Msa0301590:intron | 35.0% | |
| ! | TTGACATATTAGGCGTTTTC+AGG | + | chr2_3:57990949-57990968 | Msa0301590:intron | 35.0% |
| ! | TGATTGGTTCTTTACTTTGC+AGG | + | chr2_3:57990978-57990997 | Msa0301590:intron | 35.0% |
| ATGCACTAATGATAGATTGC+TGG | + | chr2_3:57991130-57991149 | Msa0301590:intron | 35.0% | |
| ATAATTAATCAACAGCCCTC+TGG | + | chr2_3:57991156-57991175 | Msa0301590:intron | 35.0% | |
| !!! | TGTATCTTTTCATTGGCTTC+AGG | + | chr2_3:57991285-57991304 | Msa0301590:intron | 35.0% |
| TATTGCAAACAGATGCAAGT+CGG | + | chr2_3:57991550-57991569 | Msa0301590:CDS | 35.0% | |
| CCAATACTCAACCAACTTAT+AGG | - | chr2_3:57991579-57991598 | None:intergenic | 35.0% | |
| !! | CCTATAAGTTGGTTGAGTAT+TGG | + | chr2_3:57991576-57991595 | Msa0301590:CDS | 35.0% |
| TGCACATTAGATATCTGTAC+AGG | - | chr2_3:57991605-57991624 | None:intergenic | 35.0% | |
| TGAAATAAGGACATCACGAA+TGG | - | chr2_3:57991705-57991724 | None:intergenic | 35.0% | |
| ! | GTGATGTCCTTATTTCAATC+CGG | + | chr2_3:57991708-57991727 | Msa0301590:CDS | 35.0% |
| TAACCTTCCGGATTGAAATA+AGG | - | chr2_3:57991718-57991737 | None:intergenic | 35.0% | |
| ! | AAAAGTGCAAACTAACCTTC+CGG | - | chr2_3:57991730-57991749 | None:intergenic | 35.0% |
| TGACATGCACGATTCATTAT+TGG | + | chr2_3:57991992-57992011 | Msa0301590:intron | 35.0% | |
| TCTATTTAGGTCATACCACT+AGG | - | chr2_3:57992034-57992053 | None:intergenic | 35.0% | |
| ATCAGTGATCGAAATAGGTT+TGG | + | chr2_3:57992277-57992296 | Msa0301590:intron | 35.0% | |
| GAAATAGGTTTGGATTCATG+TGG | + | chr2_3:57992287-57992306 | Msa0301590:intron | 35.0% | |
| ATCTTGCTCCGAAGTTAATT+TGG | + | chr2_3:57992349-57992368 | Msa0301590:intron | 35.0% | |
| TAGGGAGACCAAATTAACTT+CGG | - | chr2_3:57992360-57992379 | None:intergenic | 35.0% | |
| ACAACGAATGAAAATCAGGA+AGG | + | chr2_3:57992520-57992539 | Msa0301590:intron | 35.0% | |
| TTAACGCATGAAACAGATCT+GGG | - | chr2_3:57992637-57992656 | None:intergenic | 35.0% | |
| TTTAACGCATGAAACAGATC+TGG | - | chr2_3:57992638-57992657 | None:intergenic | 35.0% | |
| TGATTAAGGATGATTTCGGT+AGG | - | chr2_3:57992725-57992744 | None:intergenic | 35.0% | |
| GAGATTATGGGAATGGTTAT+GGG | - | chr2_3:57992810-57992829 | None:intergenic | 35.0% | |
| AGAGATTATGGGAATGGTTA+TGG | - | chr2_3:57992811-57992830 | None:intergenic | 35.0% | |
| TGGTATAGAGATTATGGGAA+TGG | - | chr2_3:57992817-57992836 | None:intergenic | 35.0% | |
| TGATGGGAGAGAGAAAAAAA+AGG | + | chr2_3:57993028-57993047 | Msa0301590:intron | 35.0% | |
| GTTTGGAAGAGTTAAGTCTT+AGG | + | chr2_3:57993110-57993129 | Msa0301590:intron | 35.0% | |
| AAAGTAGAGAAATACTCGGA+TGG | - | chr2_3:57993143-57993162 | None:intergenic | 35.0% | |
| ! | GTGGCTATGAATTTTCGTAA+CGG | + | chr2_3:57993217-57993236 | Msa0301590:intron | 35.0% |
| TTCGTAACGGTTTCATTTAC+TGG | + | chr2_3:57993230-57993249 | Msa0301590:intron | 35.0% | |
| CTTTAGTAGTAAAGGTTGCA+GGG | - | chr2_3:57993306-57993325 | None:intergenic | 35.0% | |
| CTGCAACCTTTACTACTAAA+GGG | + | chr2_3:57993305-57993324 | Msa0301590:CDS | 35.0% | |
| !! | ACGGCTTTTTCTTTTTGACT+CGG | - | chr2_3:57993350-57993369 | None:intergenic | 35.0% |
| TCCAACATTCAGATATGCAA+CGG | - | chr2_3:57993369-57993388 | None:intergenic | 35.0% | |
| GTCAGCAACTTTATGAAGTA+TGG | - | chr2_3:57993528-57993547 | None:intergenic | 35.0% | |
| ! | GTAACTCACCTTCGATTTTA+TGG | + | chr2_3:57993621-57993640 | Msa0301590:CDS | 35.0% |
| GACAGACGAAGAACAATTCA+GGG | - | chr2_3:57986916-57986935 | None:intergenic | 40.0% | |
| TGACAGACGAAGAACAATTC+AGG | - | chr2_3:57986917-57986936 | None:intergenic | 40.0% | |
| ! | TGCATGGATTGTAACGGAAT+CGG | - | chr2_3:57986945-57986964 | None:intergenic | 40.0% |
| TGAATCTGACAATCACTGCA+TGG | - | chr2_3:57986961-57986980 | None:intergenic | 40.0% | |
| ATGCAGTGATTGTCAGATTC+AGG | + | chr2_3:57986960-57986979 | Msa0301590:five_prime_UTR | 40.0% | |
| ! | TTTTAGTCTCTTCCTACGGA+GGG | + | chr2_3:57987384-57987403 | Msa0301590:intron | 40.0% |
| !!! | CACGTGGTTTTGTAATTTGC+GGG | + | chr2_3:57987415-57987434 | Msa0301590:intron | 40.0% |
| GGGACTATAGAGTAGATTCA+GGG | + | chr2_3:57987435-57987454 | Msa0301590:intron | 40.0% | |
| !! | TCTAGGTTTGGTTCCACTTT+TGG | - | chr2_3:57987810-57987829 | None:intergenic | 40.0% |
| CACCATAGTACCAACTACAA+AGG | - | chr2_3:57988140-57988159 | None:intergenic | 40.0% | |
| ! | TTTTTGCTTTCTCGCTGCTT+CGG | - | chr2_3:57988360-57988379 | None:intergenic | 40.0% |
| AGACTTCTGAGTACTTGAAG+AGG | - | chr2_3:57988461-57988480 | None:intergenic | 40.0% | |
| AAGTCTGAGCAAGTAGAGAA+GGG | + | chr2_3:57988475-57988494 | Msa0301590:CDS | 40.0% | |
| !! | ACAGACTTTCTTCTGGTTTC+AGG | - | chr2_3:57988514-57988533 | None:intergenic | 40.0% |
| !!! | CCTGCACTTTTAGAATCTGA+AGG | - | chr2_3:57988616-57988635 | None:intergenic | 40.0% |
| ! | CCTTCAGATTCTAAAAGTGC+AGG | + | chr2_3:57988613-57988632 | Msa0301590:CDS | 40.0% |
| ! | TCTAAAAGTGCAGGTTCTCT+TGG | + | chr2_3:57988622-57988641 | Msa0301590:CDS | 40.0% |
| ! | GCAATTGACATTTGAAGCCA+AGG | + | chr2_3:57988687-57988706 | Msa0301590:CDS | 40.0% |
| TGAAAATGAGGAACACAACG+TGG | + | chr2_3:57988717-57988736 | Msa0301590:CDS | 40.0% | |
| AAAGAGAGACCGATACATCA+GGG | - | chr2_3:57988776-57988795 | None:intergenic | 40.0% | |
| TAAAGAGAGACCGATACATC+AGG | - | chr2_3:57988777-57988796 | None:intergenic | 40.0% | |
| TAGTTAAATGAAGCTAGCGC+AGG | + | chr2_3:57988963-57988982 | Msa0301590:intron | 40.0% | |
| AGTTAAATGAAGCTAGCGCA+GGG | + | chr2_3:57988964-57988983 | Msa0301590:intron | 40.0% | |
| ! | GCTTGATTTTCAGATTGCCT+TGG | + | chr2_3:57989113-57989132 | Msa0301590:intron | 40.0% |
| ATTAGCAAGCCAAATCAGGA+AGG | + | chr2_3:57989149-57989168 | Msa0301590:CDS | 40.0% | |
| !! | ACTCTAGGATTGGCGATAAA+AGG | + | chr2_3:57989294-57989313 | Msa0301590:CDS | 40.0% |
| !! | GATAAAAGGTGCCAAAGCAA+AGG | + | chr2_3:57989308-57989327 | Msa0301590:CDS | 40.0% |
| AGCAAAGGTGACAATAGTAG+TGG | + | chr2_3:57989323-57989342 | Msa0301590:CDS | 40.0% | |
| GTACACTTCCATTCGAAGAT+GGG | + | chr2_3:57989408-57989427 | Msa0301590:CDS | 40.0% | |
| TTTGCTTTCCCATCTTCGAA+TGG | - | chr2_3:57989419-57989438 | None:intergenic | 40.0% | |
| ! | AAGAAACCAGAGTTGACTCT+AGG | + | chr2_3:57989438-57989457 | Msa0301590:CDS | 40.0% |
| TACTGTTGTCAGCTTTGCTT+TGG | - | chr2_3:57989481-57989500 | None:intergenic | 40.0% | |
| AGCAAAGCTGACAACAGTAT+TGG | + | chr2_3:57989482-57989501 | Msa0301590:CDS | 40.0% | |
| ! | AACTCTGGTCTCTTTTGCTT+TGG | - | chr2_3:57989591-57989610 | None:intergenic | 40.0% |
| AAGAGACCAGAGTTAACTCT+AGG | + | chr2_3:57989597-57989616 | Msa0301590:CDS | 40.0% | |
| ACTCAACCTAGAGTTAACTC+TGG | - | chr2_3:57989606-57989625 | None:intergenic | 40.0% | |
| ! | AGAGTTAACTCTAGGTTGAG+TGG | + | chr2_3:57989605-57989624 | Msa0301590:CDS | 40.0% |
| ! | GAGTTAACTCTAGGTTGAGT+GGG | + | chr2_3:57989606-57989625 | Msa0301590:CDS | 40.0% |
| ! | TCATAAGTTGGGGTGTTAGA+TGG | - | chr2_3:57989680-57989699 | None:intergenic | 40.0% |
| ! | CACACTAGTCTCATAAGTTG+GGG | - | chr2_3:57989690-57989709 | None:intergenic | 40.0% |
| ! | CCACACTAGTCTCATAAGTT+GGG | - | chr2_3:57989691-57989710 | None:intergenic | 40.0% |
| ! | ACCACACTAGTCTCATAAGT+TGG | - | chr2_3:57989692-57989711 | None:intergenic | 40.0% |
| GTGATTGCCTTTCTCTTAGA+AGG | - | chr2_3:57989845-57989864 | None:intergenic | 40.0% | |
| TAAGAGAAAGGCAATCACAG+TGG | + | chr2_3:57989847-57989866 | Msa0301590:CDS | 40.0% | |
| !!! | TGTTGCCACCTAGTTTTGAA+GGG | - | chr2_3:57989940-57989959 | None:intergenic | 40.0% |
| !!! | TTGTTGCCACCTAGTTTTGA+AGG | - | chr2_3:57989941-57989960 | None:intergenic | 40.0% |
| GACGGTTTGATATAGAGGAA+GGG | - | chr2_3:57990106-57990125 | None:intergenic | 40.0% | |
| AGACGGTTTGATATAGAGGA+AGG | - | chr2_3:57990107-57990126 | None:intergenic | 40.0% | |
| CATGTTTGTTTGGATGGTGT+CGG | + | chr2_3:57990307-57990326 | Msa0301590:intron | 40.0% | |
| ! | TCTGTAAGTCTTCTTTTGCC+TGG | - | chr2_3:57990733-57990752 | None:intergenic | 40.0% |
| !!! | CGTTTTCAGGTCTAAGTGAT+TGG | + | chr2_3:57990962-57990981 | Msa0301590:intron | 40.0% |
| TGGTTCTTTACTTTGCAGGT+TGG | + | chr2_3:57990982-57991001 | Msa0301590:intron | 40.0% | |
| TCAGGACATAGATGTCATTG+AGG | + | chr2_3:57991303-57991322 | Msa0301590:intron | 40.0% | |
| !! | CACATTTGAGTTGAGGGATA+AGG | - | chr2_3:57991413-57991432 | None:intergenic | 40.0% |
| !! | TCAAAGTGTTGTTCATCCGA+AGG | + | chr2_3:57991511-57991530 | Msa0301590:CDS | 40.0% |
| TCACTTGACACTTTCTCCTT+CGG | - | chr2_3:57991530-57991549 | None:intergenic | 40.0% | |
| !! | TCGCCAAAGATTGATAGTGT+TGG | + | chr2_3:57991677-57991696 | Msa0301590:CDS | 40.0% |
| !! | CGCCAAAGATTGATAGTGTT+GGG | + | chr2_3:57991678-57991697 | Msa0301590:CDS | 40.0% |
| !! | GCCAAAGATTGATAGTGTTG+GGG | + | chr2_3:57991679-57991698 | Msa0301590:CDS | 40.0% |
| ! | TGTCCTTATTTCAATCCGGA+AGG | + | chr2_3:57991712-57991731 | Msa0301590:CDS | 40.0% |
| ATTGTACTAACCAAATGCGG+CGG | - | chr2_3:57991823-57991842 | None:intergenic | 40.0% | |
| AAACGTCCTATTTCACCTAG+TGG | + | chr2_3:57992016-57992035 | Msa0301590:intron | 40.0% | |
| GTCATACCACTAGGTGAAAT+AGG | - | chr2_3:57992025-57992044 | None:intergenic | 40.0% | |
| AAGGTGAGGATTGTCAAAGT+TGG | - | chr2_3:57992063-57992082 | None:intergenic | 40.0% | |
| !! | ACCTTGCAAGCAAGTTTTGT+AGG | + | chr2_3:57992078-57992097 | Msa0301590:intron | 40.0% |
| !! | CCTTGCAAGCAAGTTTTGTA+GGG | + | chr2_3:57992079-57992098 | Msa0301590:intron | 40.0% |
| ! | TTTGGGTGGCAATCTAGAAT+AGG | - | chr2_3:57992135-57992154 | None:intergenic | 40.0% |
| TTATGCCTGATCAATTTGGG+TGG | - | chr2_3:57992149-57992168 | None:intergenic | 40.0% | |
| ACCCAAATTGATCAGGCATA+AGG | + | chr2_3:57992148-57992167 | Msa0301590:intron | 40.0% | |
| GCCTTATGCCTGATCAATTT+GGG | - | chr2_3:57992152-57992171 | None:intergenic | 40.0% | |
| TGCCTTATGCCTGATCAATT+TGG | - | chr2_3:57992153-57992172 | None:intergenic | 40.0% | |
| CATCGATCAGTGATCGAAAT+AGG | + | chr2_3:57992272-57992291 | Msa0301590:intron | 40.0% | |
| !! | TCTCTCTCTCTCGTTGTTTT+TGG | + | chr2_3:57992603-57992622 | Msa0301590:intron | 40.0% |
| !!! | CTCTCTCTCTCGTTGTTTTT+GGG | + | chr2_3:57992604-57992623 | Msa0301590:intron | 40.0% |
| !!! | TCTCTCTCTCGTTGTTTTTG+GGG | + | chr2_3:57992605-57992624 | Msa0301590:intron | 40.0% |
| ! | CACACTCAGGCACAATATTT+TGG | - | chr2_3:57992837-57992856 | None:intergenic | 40.0% |
| CAATAGAACAATGCTCGTGT+GGG | - | chr2_3:57992902-57992921 | None:intergenic | 40.0% | |
| CCTTTAGTAGTAAAGGTTGC+AGG | - | chr2_3:57993307-57993326 | None:intergenic | 40.0% | |
| CCTGCAACCTTTACTACTAA+AGG | + | chr2_3:57993304-57993323 | Msa0301590:CDS | 40.0% | |
| TCAAGGCCCTTTAGTAGTAA+AGG | - | chr2_3:57993314-57993333 | None:intergenic | 40.0% | |
| TCGGATACTCAACTTCTTCA+AGG | - | chr2_3:57993331-57993350 | None:intergenic | 40.0% | |
| !!! | AAGGGCACTCATACTTTTTC+AGG | + | chr2_3:57993454-57993473 | Msa0301590:CDS | 40.0% |
| !! | GAACAATTCAGGGTCGGTTT+TGG | - | chr2_3:57986906-57986925 | None:intergenic | 45.0% |
| GACGAAGAACAATTCAGGGT+CGG | - | chr2_3:57986912-57986931 | None:intergenic | 45.0% | |
| !! | GTTTTAGTCTCTTCCTACGG+AGG | + | chr2_3:57987383-57987402 | Msa0301590:intron | 45.0% |
| CGGGACTATAGAGTAGATTC+AGG | + | chr2_3:57987434-57987453 | Msa0301590:intron | 45.0% | |
| TTCTCAAGTTACTCAAGGGG+AGG | - | chr2_3:57987973-57987992 | None:intergenic | 45.0% | |
| TCGTTCTAGTCAAAAGGCCA+AGG | + | chr2_3:57988306-57988325 | Msa0301590:CDS | 45.0% | |
| ! | TTTTGCTTTCTCGCTGCTTC+GGG | - | chr2_3:57988359-57988378 | None:intergenic | 45.0% |
| CCAGCTGTATCCGATACATT+GGG | - | chr2_3:57988394-57988413 | None:intergenic | 45.0% | |
| ACCAGCTGTATCCGATACAT+TGG | - | chr2_3:57988395-57988414 | None:intergenic | 45.0% | |
| GAAGTCTGAGCAAGTAGAGA+AGG | + | chr2_3:57988474-57988493 | Msa0301590:CDS | 45.0% | |
| !! | TTTCTTCTGGTTTCAGGAGC+TGG | - | chr2_3:57988508-57988527 | None:intergenic | 45.0% |
| GACCCTTACAGACTTTCTTC+TGG | - | chr2_3:57988521-57988540 | None:intergenic | 45.0% | |
| ! | GTTTTGCCAGATCTCGTCAA+AGG | - | chr2_3:57988571-57988590 | None:intergenic | 45.0% |
| TGACGAGATCTGGCAAAACT+AGG | + | chr2_3:57988572-57988591 | Msa0301590:CDS | 45.0% | |
| AAATGACCGCCCTGATGTAT+CGG | + | chr2_3:57988764-57988783 | Msa0301590:CDS | 45.0% | |
| GCCAACTTTCTTGTTCACTC+AGG | + | chr2_3:57988847-57988866 | Msa0301590:intron | 45.0% | |
| GCCTGAGTGAACAAGAAAGT+TGG | - | chr2_3:57988851-57988870 | None:intergenic | 45.0% | |
| GTTAAATGAAGCTAGCGCAG+GGG | + | chr2_3:57988965-57988984 | Msa0301590:intron | 45.0% | |
| ! | GTTTCTCCTAATCGCTGGTT+GGG | + | chr2_3:57988987-57989006 | Msa0301590:intron | 45.0% |
| AAACAACCCAACCAGCGATT+AGG | - | chr2_3:57988996-57989015 | None:intergenic | 45.0% | |
| CTGTTGTCACCTTCCTGATT+TGG | - | chr2_3:57989161-57989180 | None:intergenic | 45.0% | |
| ! | AACTGTGGTCTCTTTTGCTG+TGG | - | chr2_3:57989273-57989292 | None:intergenic | 45.0% |
| ! | AAGAGACCACAGTTGACTCT+AGG | + | chr2_3:57989279-57989298 | Msa0301590:CDS | 45.0% |
| !! | ACCACAGTTGACTCTAGGAT+TGG | + | chr2_3:57989284-57989303 | Msa0301590:CDS | 45.0% |
| GGTACACTTCCATTCGAAGA+TGG | + | chr2_3:57989407-57989426 | Msa0301590:CDS | 45.0% | |
| CCCAACTTATGAGACTAGTG+TGG | + | chr2_3:57989688-57989707 | Msa0301590:CDS | 45.0% | |
| ! | GACTTGGTCAGTAACAATGC+TGG | + | chr2_3:57989794-57989813 | Msa0301590:CDS | 45.0% |
| ! | GTCAGTAACAATGCTGGTCT+TGG | + | chr2_3:57989800-57989819 | Msa0301590:CDS | 45.0% |
| !! | AGTAACAATGCTGGTCTTGG+TGG | + | chr2_3:57989803-57989822 | Msa0301590:CDS | 45.0% |
| !! | GTAACAATGCTGGTCTTGGT+GGG | + | chr2_3:57989804-57989823 | Msa0301590:CDS | 45.0% |
| !! | TAACAATGCTGGTCTTGGTG+GGG | + | chr2_3:57989805-57989824 | Msa0301590:CDS | 45.0% |
| !!! | GTTTTGAAGGGAGAGCATCA+GGG | - | chr2_3:57989928-57989947 | None:intergenic | 45.0% |
| !!! | AGTTTTGAAGGGAGAGCATC+AGG | - | chr2_3:57989929-57989948 | None:intergenic | 45.0% |
| GATGCTCTCCCTTCAAAACT+AGG | + | chr2_3:57989929-57989948 | Msa0301590:CDS | 45.0% | |
| GAGTTGCAGATGTGTGCAAA+AGG | - | chr2_3:57990374-57990393 | None:intergenic | 45.0% | |
| !! | GGATTTTAATCCTACAGCCG+AGG | + | chr2_3:57991003-57991022 | Msa0301590:CDS | 45.0% |
| AGGGAACAGATTCTATGCCT+GGG | - | chr2_3:57991184-57991203 | None:intergenic | 45.0% | |
| AAGGGAACAGATTCTATGCC+TGG | - | chr2_3:57991185-57991204 | None:intergenic | 45.0% | |
| AAGTGGAACTGGACACCTTA+AGG | + | chr2_3:57991360-57991379 | Msa0301590:CDS | 45.0% | |
| CAAGTCGGACTCCTATAAGT+TGG | + | chr2_3:57991565-57991584 | Msa0301590:CDS | 45.0% | |
| GCCCCAACACTATCAATCTT+TGG | - | chr2_3:57991683-57991702 | None:intergenic | 45.0% | |
| ! | CAAAACTTGCTTGCAAGGTG+AGG | - | chr2_3:57992077-57992096 | None:intergenic | 45.0% |
| ! | CCCTACAAAACTTGCTTGCA+AGG | - | chr2_3:57992082-57992101 | None:intergenic | 45.0% |
| GATTGCCACCCAAATTGATC+AGG | + | chr2_3:57992141-57992160 | Msa0301590:intron | 45.0% | |
| !!! | CTCTCTCTCGTTGTTTTTGG+GGG | + | chr2_3:57992606-57992625 | Msa0301590:intron | 45.0% |
| CTACGGCTTCACATGCAAAT+GGG | + | chr2_3:57992782-57992801 | Msa0301590:intron | 45.0% | |
| GCAATAGAACAATGCTCGTG+TGG | - | chr2_3:57992903-57992922 | None:intergenic | 45.0% | |
| TTAACTCCACAGCTGTGAAG+TGG | + | chr2_3:57993198-57993217 | Msa0301590:intron | 45.0% | |
| GCCGTTGCATATCTGAATGT+TGG | + | chr2_3:57993365-57993384 | Msa0301590:CDS | 45.0% | |
| !! | ATATAAAAATGTAAATATAT+GGG | + | chr2_3:57990864-57990883 | Msa0301590:intron | 5.0% |
| !! | AAATTATTAAAAAATATGAA+AGG | - | chr2_3:57991941-57991960 | None:intergenic | 5.0% |
| !!! | AATTTTAAAATCAAAATATA+CGG | - | chr2_3:57992951-57992970 | None:intergenic | 5.0% |
| !!! | TATATTTTGATTTTAAAATT+TGG | + | chr2_3:57992951-57992970 | Msa0301590:intron | 5.0% |
| !!! | ATATTTTGATTTTAAAATTT+GGG | + | chr2_3:57992952-57992971 | Msa0301590:intron | 5.0% |
| !!! | CGTGTTTTTAGTCCCTCCGT+AGG | - | chr2_3:57987399-57987418 | None:intergenic | 50.0% |
| ACGGAGGGACTAAAAACACG+TGG | + | chr2_3:57987399-57987418 | Msa0301590:intron | 50.0% | |
| CCCAATGTATCGGATACAGC+TGG | + | chr2_3:57988391-57988410 | Msa0301590:CDS | 50.0% | |
| CCAGATCTCGTCAAAGGACT+TGG | - | chr2_3:57988565-57988584 | None:intergenic | 50.0% | |
| CCAAGTCCTTTGACGAGATC+TGG | + | chr2_3:57988562-57988581 | Msa0301590:CDS | 50.0% | |
| ACACAACGTGGAAAGTTCCC+AGG | + | chr2_3:57988729-57988748 | Msa0301590:CDS | 50.0% | |
| GGTTTCTCCTAATCGCTGGT+TGG | + | chr2_3:57988986-57989005 | Msa0301590:intron | 50.0% | |
| CAGGAAGGTGACAACAGTAG+TGG | + | chr2_3:57989164-57989183 | Msa0301590:CDS | 50.0% | |
| GAAGAACGGTACACTGCCAT+CGG | + | chr2_3:57989241-57989260 | Msa0301590:CDS | 50.0% | |
| ! | TTTGCTGTGGCATCTTCCGA+TGG | - | chr2_3:57989260-57989279 | None:intergenic | 50.0% |
| GCCAATCCTAGAGTCAACTG+TGG | - | chr2_3:57989288-57989307 | None:intergenic | 50.0% | |
| TCAGCTTTGCTTTGGCACCT+TGG | - | chr2_3:57989473-57989492 | None:intergenic | 50.0% | |
| GCAGAAAATTGTGCGACTCC+TGG | + | chr2_3:57989644-57989663 | Msa0301590:CDS | 50.0% | |
| CAATCAGGCTGTCCTCTTCT+GGG | - | chr2_3:57989716-57989735 | None:intergenic | 50.0% | |
| !! | AACAATGCTGGTCTTGGTGG+GGG | + | chr2_3:57989806-57989825 | Msa0301590:CDS | 50.0% |
| GCTCTCCCTTCAAAACTAGG+TGG | + | chr2_3:57989932-57989951 | Msa0301590:CDS | 50.0% | |
| AACCCATGTGCAACTGAGGT+TGG | + | chr2_3:57991034-57991053 | Msa0301590:intron | 50.0% | |
| ACCCATGTGCAACTGAGGTT+GGG | + | chr2_3:57991035-57991054 | Msa0301590:intron | 50.0% | |
| ACCCAACCTCAGTTGCACAT+GGG | - | chr2_3:57991039-57991058 | None:intergenic | 50.0% | |
| AAGTAAATTGGGGGGGGATG+TGG | - | chr2_3:57991085-57991104 | None:intergenic | 50.0% | |
| GCTCTTATCCTTCTGCTGCA+CGG | - | chr2_3:57991332-57991351 | None:intergenic | 50.0% | |
| CTGTTTCATTCCGCCGCATT+TGG | + | chr2_3:57991810-57991829 | Msa0301590:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr2_3:57992547-57992566 | None:intergenic | 50.0% | |
| CACTTCATGCCCATCAGCTA+CGG | + | chr2_3:57992765-57992784 | Msa0301590:intron | 50.0% | |
| CATGTGAAGCCGTAGCTGAT+GGG | - | chr2_3:57992777-57992796 | None:intergenic | 50.0% | |
| GCTACGGCTTCACATGCAAA+TGG | + | chr2_3:57992781-57992800 | Msa0301590:intron | 50.0% | |
| TCATAGCCACTTCACAGCTG+TGG | - | chr2_3:57993207-57993226 | None:intergenic | 50.0% | |
| TTACCAAGTCGCATCCCACT+GGG | - | chr2_3:57993605-57993624 | None:intergenic | 50.0% | |
| CTCGTCAAAGGACTTGGCGT+TGG | - | chr2_3:57988559-57988578 | None:intergenic | 55.0% | |
| GAGAGACCGATACATCAGGG+CGG | - | chr2_3:57988773-57988792 | None:intergenic | 55.0% | |
| CAGGGGTTTCTCCTAATCGC+TGG | + | chr2_3:57988982-57989001 | Msa0301590:intron | 55.0% | |
| GTCGGTCCTAGAGTCAACTC+TGG | - | chr2_3:57989447-57989466 | None:intergenic | 55.0% | |
| ACTAGTGTGGTGCCCAGAAG+AGG | + | chr2_3:57989701-57989720 | Msa0301590:CDS | 55.0% | |
| GCAATCAGGCTGTCCTCTTC+TGG | - | chr2_3:57989717-57989736 | None:intergenic | 55.0% | |
| ACAGCCTGATTGCTGCGAAG+AGG | + | chr2_3:57989724-57989743 | Msa0301590:CDS | 55.0% | |
| GTCTCCTCTTCGCAGCAATC+AGG | - | chr2_3:57989731-57989750 | None:intergenic | 55.0% | |
| ! | ACATGGGTTACGCGACTCCT+CGG | - | chr2_3:57991023-57991042 | None:intergenic | 55.0% |
| GCGTAACCCATGTGCAACTG+AGG | + | chr2_3:57991030-57991049 | Msa0301590:CDS | 55.0% | |
| CACCCAACCTCAGTTGCACA+TGG | - | chr2_3:57991040-57991059 | None:intergenic | 55.0% | |
| TTCTATGCCTGGGCACCAGA+GGG | - | chr2_3:57991174-57991193 | None:intergenic | 55.0% | |
| ATTCTATGCCTGGGCACCAG+AGG | - | chr2_3:57991175-57991194 | None:intergenic | 55.0% | |
| TGAGGAAACCGTGCAGCAGA+AGG | + | chr2_3:57991321-57991340 | Msa0301590:CDS | 55.0% | |
| GATAAGAGCGACCACGCAAG+TGG | + | chr2_3:57991343-57991362 | Msa0301590:CDS | 55.0% | |
| GGGATTTCAGGGTAGCACTG+TGG | + | chr2_3:57991457-57991476 | Msa0301590:intron | 55.0% | |
| AGGCATAAGACCCCTGAGTG+AGG | + | chr2_3:57992168-57992187 | Msa0301590:intron | 55.0% | |
| CATAAGACCCCTGAGTGAGG+TGG | + | chr2_3:57992171-57992190 | Msa0301590:intron | 55.0% | |
| TCGAGTACCACCTCACTCAG+GGG | - | chr2_3:57992181-57992200 | None:intergenic | 55.0% | |
| CTCGAGTACCACCTCACTCA+GGG | - | chr2_3:57992182-57992201 | None:intergenic | 55.0% | |
| TCTCGAGTACCACCTCACTC+AGG | - | chr2_3:57992183-57992202 | None:intergenic | 55.0% | |
| GCATGTGAAGCCGTAGCTGA+TGG | - | chr2_3:57992778-57992797 | None:intergenic | 55.0% | |
| ! | GGCTGAAGAGTGTGTTGCGT+AGG | - | chr2_3:57992881-57992900 | None:intergenic | 55.0% |
| GTTACCAAGTCGCATCCCAC+TGG | - | chr2_3:57993606-57993625 | None:intergenic | 55.0% | |
| !! | ACTCTAGGACCGACGAGCCA+AGG | + | chr2_3:57989453-57989472 | Msa0301590:CDS | 60.0% |
| ! | GCTTTGGCACCTTGGCTCGT+CGG | - | chr2_3:57989465-57989484 | None:intergenic | 60.0% |
| TGTGTGTGAGCGCACGCATG+AGG | - | chr2_3:57990698-57990717 | None:intergenic | 60.0% | |
| TTACGCGACTCCTCGGCTGT+AGG | - | chr2_3:57991016-57991035 | None:intergenic | 60.0% | |
| AGCGACCACGCAAGTGGAAC+TGG | + | chr2_3:57991349-57991368 | Msa0301590:CDS | 60.0% | |
| GGTGTCCAGTTCCACTTGCG+TGG | - | chr2_3:57991357-57991376 | None:intergenic | 60.0% | |
| TACTTGACCCACGTGCCCAG+TGG | + | chr2_3:57993587-57993606 | Msa0301590:CDS | 60.0% | |
| ACTTGACCCACGTGCCCAGT+GGG | + | chr2_3:57993588-57993607 | Msa0301590:CDS | 60.0% | |
| TCAACAGCCCTCTGGTGCCC+AGG | + | chr2_3:57991164-57991183 | Msa0301590:intron | 65.0% | |
| TCGCATCCCACTGGGCACGT+GGG | - | chr2_3:57993597-57993616 | None:intergenic | 65.0% | |
| GTGCCCAGTGGGATGCGACT+TGG | + | chr2_3:57993599-57993618 | Msa0301590:CDS | 65.0% | |
| CACAAGTCGTGTGGGCACGG+CGG | - | chr2_3:57993662-57993681 | None:intergenic | 65.0% | |
| GTCGCATCCCACTGGGCACG+TGG | - | chr2_3:57993598-57993617 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 57986858 | 57993682 | 57986858 | ID=Msa0301590;Name=Msa0301590 |
| chr2_3 | mRNA | 57986858 | 57993682 | 57986858 | ID=Msa0301590-mRNA-1;Parent=Msa0301590;Name=Msa0301590-mRNA-1;_AED=0.03;_eAED=0.04;_QI=155|1|0.71|1|0.83|0.71|7|0|726 |
| chr2_3 | exon | 57986858 | 57986981 | 57986858 | ID=Msa0301590-mRNA-1:exon:18654;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57988261 | 57988811 | 57988261 | ID=Msa0301590-mRNA-1:exon:18655;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57989126 | 57989981 | 57989126 | ID=Msa0301590-mRNA-1:exon:18656;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57991000 | 57991051 | 57991000 | ID=Msa0301590-mRNA-1:exon:18657;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57991307 | 57991381 | 57991307 | ID=Msa0301590-mRNA-1:exon:18658;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57991467 | 57991733 | 57991467 | ID=Msa0301590-mRNA-1:exon:18659;Parent=Msa0301590-mRNA-1 |
| chr2_3 | exon | 57993272 | 57993682 | 57993272 | ID=Msa0301590-mRNA-1:exon:18660;Parent=Msa0301590-mRNA-1 |
| chr2_3 | five_prime_UTR | 57986858 | 57986981 | 57986858 | ID=Msa0301590-mRNA-1:five_prime_utr;Parent=Msa0301590-mRNA-1 |
| chr2_3 | five_prime_UTR | 57988261 | 57988291 | 57988261 | ID=Msa0301590-mRNA-1:five_prime_utr;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57988292 | 57988811 | 57988292 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57989126 | 57989981 | 57989126 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57991000 | 57991051 | 57991000 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57991307 | 57991381 | 57991307 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57991467 | 57991733 | 57991467 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| chr2_3 | CDS | 57993272 | 57993682 | 57993272 | ID=Msa0301590-mRNA-1:cds;Parent=Msa0301590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
