Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566140 | XP_003629947.1 | 99.550 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566140 | sp|Q96254|GDI1_ARATH | 85.811 | 444 | 63 | 0 | 1 | 444 | 1 | 444 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566140 | G7L8T3 | 99.550 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 0.0 | 917 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0185640 | Msa0566140 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0566140 | Msa0655990 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0566140 | Msa0699920 | 0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0566140 | Msa0781220 | 0.820775 | 5.737853e-53 | -8.615850e-47 |
| Msa0566140 | Msa1204980 | 0.808667 | 2.767206e-50 | -8.615850e-47 |
| Msa0566140 | Msa1256540 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
| Msa0566140 | Msa1296960 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566140 | MtrunA17_Chr8g0380591 | 99.550 | 444 | 2 | 0 | 1 | 444 | 1 | 444 | 0.0 | 917 |
| Msa0566140 | MtrunA17_Chr4g0049891 | 81.193 | 436 | 82 | 0 | 1 | 436 | 1 | 436 | 0.0 | 750 |
| Msa0566140 | MtrunA17_Chr5g0406991 | 25.587 | 426 | 235 | 13 | 5 | 356 | 18 | 435 | 4.97e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566140 | AT2G44100.1 | 85.811 | 444 | 63 | 0 | 1 | 444 | 1 | 444 | 0.0 | 803 |
| Msa0566140 | AT3G59920.1 | 85.360 | 444 | 65 | 0 | 1 | 444 | 1 | 444 | 0.0 | 798 |
| Msa0566140 | AT2G44100.2 | 85.814 | 430 | 61 | 0 | 1 | 430 | 1 | 430 | 0.0 | 781 |
| Msa0566140 | AT5G09550.1 | 79.505 | 444 | 91 | 0 | 1 | 444 | 1 | 444 | 0.0 | 754 |
| Msa0566140 | AT3G06540.1 | 24.661 | 442 | 250 | 15 | 5 | 366 | 15 | 453 | 1.81e-20 | 94.4 |
Find 135 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACACGACAACTATTTA+TGG | 0.154370 | 4_1:-67162777 | Msa0566140:three_prime_UTR |
| TAGCTTTATTTGTTTAATTT+TGG | 0.161390 | 4_1:-67162874 | Msa0566140:three_prime_UTR |
| TTGACCCATGACAGAAAATT+TGG | 0.184972 | 4_1:-67167896 | Msa0566140:intron |
| CACTTCCCTTAATCTTATTC+AGG | 0.214984 | 4_1:-67169341 | Msa0566140:intron |
| GATGATCAAGGAAAGGTTAT+TGG | 0.226106 | 4_1:-67166815 | Msa0566140:CDS |
| GGCTTTGAAGTCCCCACTTA+TGG | 0.233527 | 4_1:-67168507 | Msa0566140:CDS |
| TTTGGGTGTTTAGTTCATTA+TGG | 0.255862 | 4_1:-67168773 | Msa0566140:intron |
| GCACGGCTTAGCGCTGTTTA+TGG | 0.259796 | 4_1:-67167426 | Msa0566140:CDS |
| TTCAGCTCTGGAAGAAATTC+AGG | 0.276301 | 4_1:-67169228 | Msa0566140:intron |
| CGATCTTGATTTGATTTGAT+TGG | 0.276344 | 4_1:+67169625 | None:intergenic |
| TGACAAGCCTCCTCCTCATT+TGG | 0.302661 | 4_1:-67169200 | Msa0566140:CDS |
| AGTATATCTACCTTGCATTC+AGG | 0.307677 | 4_1:+67167381 | None:intergenic |
| AACATGTATACGTTGATAAC+TGG | 0.312028 | 4_1:-67163766 | Msa0566140:CDS |
| CCAGGTTTCAGTTCAATTGC+AGG | 0.316392 | 4_1:+67164014 | None:intergenic |
| AGAATACGATGTAATCGTTC+TGG | 0.319703 | 4_1:-67169551 | Msa0566140:CDS |
| ATATATCCTTTGTATGGTTT+AGG | 0.331062 | 4_1:-67167586 | Msa0566140:CDS |
| AAACCTGGAATTGACCTTCT+AGG | 0.335092 | 4_1:-67163999 | Msa0566140:CDS |
| TCGTTGTAAAGTGCAAAGTA+TGG | 0.345660 | 4_1:+67163071 | None:intergenic |
| GACAAGCCTCCTCCTCATTT+GGG | 0.351742 | 4_1:-67169199 | Msa0566140:CDS |
| TGTAGAACAGATTTGTTTGC+AGG | 0.358078 | 4_1:-67162981 | Msa0566140:three_prime_UTR |
| GATTGGGAGTCATTGGTGTT+GGG | 0.368885 | 4_1:+67166409 | None:intergenic |
| TCTAGGGTGGGTTCATTGAC+TGG | 0.390022 | 4_1:+67163933 | None:intergenic |
| TATTCTCCCACAAAAGCAAC+TGG | 0.403427 | 4_1:-67166377 | Msa0566140:CDS |
| GCTTTGAAGTCCCCACTTAT+GGG | 0.406357 | 4_1:-67168506 | Msa0566140:CDS |
| GAGTCTCTTGCACGATTTCA+AGG | 0.410458 | 4_1:-67167622 | Msa0566140:CDS |
| ATTACGCACAAGCGAGCATC+TGG | 0.410887 | 4_1:+67162943 | None:intergenic |
| CCTTACATATATCCTTTGTA+TGG | 0.411629 | 4_1:-67167592 | Msa0566140:CDS |
| TCTTTACTCTTCTGCAGCAC+TGG | 0.413041 | 4_1:+67163140 | None:intergenic |
| CTCTTTACAGTGTCTAGTGC+TGG | 0.413653 | 4_1:+67167800 | None:intergenic |
| ACATTTAACAAACGAGCAAT+TGG | 0.419428 | 4_1:+67162820 | None:intergenic |
| TGACTTACATGTCTGACTTT+CGG | 0.427909 | 4_1:+67166353 | None:intergenic |
| CTGCGATCTCCGATCGAAGA+TGG | 0.428438 | 4_1:-67169578 | Msa0566140:exon |
| CGATTGGGAGTCATTGGTGT+TGG | 0.428832 | 4_1:+67166408 | None:intergenic |
| ACCTTGTTGGTCAAGTATGA+TGG | 0.428877 | 4_1:+67166743 | None:intergenic |
| GGATTTCATTGGTCATGCTT+TGG | 0.435998 | 4_1:-67167855 | Msa0566140:CDS |
| GGTCCTAGAAGGTCAATTCC+AGG | 0.437493 | 4_1:+67163996 | None:intergenic |
| CTGAATAAGATTAAGGGAAG+TGG | 0.439368 | 4_1:+67169342 | None:intergenic |
| AAAGCCTCCATGTCATTTGA+AGG | 0.440668 | 4_1:+67168524 | None:intergenic |
| TCTCACAATGTTTGCCCAAA+GGG | 0.442192 | 4_1:-67164080 | Msa0566140:CDS |
| TTGCACCGATTGGGAGTCAT+TGG | 0.442455 | 4_1:+67166402 | None:intergenic |
| GATAACACTGTGGATTTCAT+TGG | 0.445796 | 4_1:-67167866 | Msa0566140:CDS |
| TCGAAATAAAGCAGTTGTCT+AGG | 0.450436 | 4_1:+67163916 | None:intergenic |
| CCTGCAATTGAACTGAAACC+TGG | 0.453263 | 4_1:-67164014 | Msa0566140:CDS |
| GTCTTGCTAACTTGTGCTCC+TGG | 0.454438 | 4_1:-67162725 | Msa0566140:three_prime_UTR |
| GAGTCATTGGTGTTGGGGAT+CGG | 0.454805 | 4_1:+67166415 | None:intergenic |
| AAGACACGACAACTATTTAT+GGG | 0.459161 | 4_1:-67162776 | Msa0566140:three_prime_UTR |
| GAGAATAACTTGCACCGATT+GGG | 0.465079 | 4_1:+67166393 | None:intergenic |
| GATGTAATCGTTCTGGGAAC+TGG | 0.470059 | 4_1:-67169544 | Msa0566140:CDS |
| TTCAGACTGCTTCTTCTACT+CGG | 0.478139 | 4_1:+67169689 | None:intergenic |
| ATGGATAGAAATGATTATTA+CGG | 0.478912 | 4_1:-67169373 | Msa0566140:CDS |
| TCTCATCAACAGGTCCTAGA+AGG | 0.482856 | 4_1:+67163985 | None:intergenic |
| TTTCAAATATTCCCATAAGT+GGG | 0.483406 | 4_1:+67168495 | None:intergenic |
| GGAGAATAACTTGCACCGAT+TGG | 0.484322 | 4_1:+67166392 | None:intergenic |
| ATCGGAGATCGCAGTCGAAA+GGG | 0.491725 | 4_1:+67169587 | None:intergenic |
| GAATACGATGTAATCGTTCT+GGG | 0.496229 | 4_1:-67169550 | Msa0566140:CDS |
| GTTTAGTTCATTATGGCCAA+TGG | 0.499819 | 4_1:-67168766 | Msa0566140:intron |
| CGAAATAAAGCAGTTGTCTA+GGG | 0.502383 | 4_1:+67163917 | None:intergenic |
| CTCTATTTCAAAGCTGTGGA+TGG | 0.502434 | 4_1:-67168700 | Msa0566140:CDS |
| TCACTTTGAATCAACAGTAC+TGG | 0.502679 | 4_1:-67163797 | Msa0566140:CDS |
| GTTATTGGCGTCACGTCTGA+AGG | 0.507245 | 4_1:-67166800 | Msa0566140:CDS |
| CAGGTGGAATTTGATGATCA+AGG | 0.509665 | 4_1:-67166827 | Msa0566140:CDS |
| ACTGATCCTAAAACTCATGA+TGG | 0.512382 | 4_1:-67168425 | Msa0566140:CDS |
| CCATACAAAGGATATATGTA+AGG | 0.512388 | 4_1:+67167592 | None:intergenic |
| AGTGGTCTTCTCTCCGTCGA+TGG | 0.517094 | 4_1:-67169502 | Msa0566140:CDS |
| ACCATTTCAACAGGTGAGGA+AGG | 0.530785 | 4_1:-67166476 | Msa0566140:intron |
| TTTCAACAGGTGAGGAAGGT+TGG | 0.530894 | 4_1:-67166472 | Msa0566140:intron |
| GATCGGAGATCGCAGTCGAA+AGG | 0.536746 | 4_1:+67169586 | None:intergenic |
| CTAGAACCCAAATGAGGAGG+AGG | 0.539538 | 4_1:+67169193 | None:intergenic |
| TCCTAAAACTCATGATGGGA+TGG | 0.544577 | 4_1:-67168420 | Msa0566140:CDS |
| ACAGGTGAGGAAGGTTGGTA+AGG | 0.545562 | 4_1:-67166467 | Msa0566140:intron |
| GGCCAATGGTACTTTAGTGA+GGG | 0.545687 | 4_1:-67168752 | Msa0566140:CDS |
| AACTGCTTAAAGAGTGCACC+AGG | 0.547647 | 4_1:+67162707 | None:intergenic |
| AACCCTCACTAAAGTACCAT+TGG | 0.548805 | 4_1:+67168750 | None:intergenic |
| TTCTCACAATGTTTGCCCAA+AGG | 0.554054 | 4_1:-67164081 | Msa0566140:CDS |
| TGGTTTAGGAGAGCTTCCTC+AGG | 0.555597 | 4_1:-67167572 | Msa0566140:intron |
| GTTGAATAAACCTGAATGCA+AGG | 0.558302 | 4_1:-67167391 | Msa0566140:intron |
| ATTGGGAGTCATTGGTGTTG+GGG | 0.558324 | 4_1:+67166410 | None:intergenic |
| GAGAATACGAGCAACAGAAT+AGG | 0.558919 | 4_1:+67164099 | None:intergenic |
| TATTGGTACAGGCATTTGCA+CGG | 0.559199 | 4_1:-67167443 | Msa0566140:intron |
| CATTGGTGTTGGGGATCGGA+TGG | 0.560062 | 4_1:+67166419 | None:intergenic |
| CAAGGTACCTTCAAATGACA+TGG | 0.560179 | 4_1:-67168531 | Msa0566140:CDS |
| GGAAGGTTGGTAAGGTTGCA+AGG | 0.561162 | 4_1:-67166459 | Msa0566140:CDS |
| AGTCTCTTGCACGATTTCAA+GGG | 0.561340 | 4_1:-67167621 | Msa0566140:CDS |
| CGGCTTAGCGCTGTTTATGG+AGG | 0.561599 | 4_1:-67167423 | Msa0566140:CDS |
| CTTTGTCTTTAACAAAGCAA+AGG | 0.562953 | 4_1:-67168674 | Msa0566140:intron |
| GGAATTTGATGATCAAGGAA+AGG | 0.566365 | 4_1:-67166822 | Msa0566140:CDS |
| TTCAAATATTCCCATAAGTG+GGG | 0.568438 | 4_1:+67168496 | None:intergenic |
| CTTGACAAGAGTCACTACTA+AGG | 0.569477 | 4_1:-67168396 | Msa0566140:CDS |
| TGGCCAATGGTACTTTAGTG+AGG | 0.570652 | 4_1:-67168753 | Msa0566140:CDS |
| AATAAAGCAGTTGTCTAGGG+TGG | 0.573026 | 4_1:+67163920 | None:intergenic |
| TCAGCTCTGGAAGAAATTCA+GGG | 0.573618 | 4_1:-67169227 | Msa0566140:intron |
| GTATCTCTATTTCAAAGCTG+TGG | 0.574401 | 4_1:-67168704 | Msa0566140:CDS |
| GTCTCTTGCACGATTTCAAG+GGG | 0.577654 | 4_1:-67167620 | Msa0566140:CDS |
| GTAGAACAGATTTGTTTGCA+GGG | 0.578944 | 4_1:-67162980 | Msa0566140:three_prime_UTR |
| CAACACCAATGACTCCCAAT+CGG | 0.583889 | 4_1:-67166407 | Msa0566140:CDS |
| ACGCACAAGCGAGCATCTGG+AGG | 0.583998 | 4_1:+67162946 | None:intergenic |
| AATCCACAGTGTTATCATCA+AGG | 0.587304 | 4_1:+67167873 | None:intergenic |
| CGCACAAGCGAGCATCTGGA+GGG | 0.587744 | 4_1:+67162947 | None:intergenic |
| GGTTACTTTGAGGCCATCGA+CGG | 0.588114 | 4_1:+67169489 | None:intergenic |
| CTGATCCTAAAACTCATGAT+GGG | 0.591782 | 4_1:-67168424 | Msa0566140:CDS |
| TGTTTGTTATGTGTTGCCGA+TGG | 0.592677 | 4_1:-67163097 | Msa0566140:three_prime_UTR |
| GAGTAGAAGAAGCAGTCTGA+AGG | 0.594056 | 4_1:-67169687 | Msa0566140:five_prime_UTR |
| TAATATCGATATGAACCCTA+AGG | 0.595316 | 4_1:-67169161 | Msa0566140:intron |
| TACTGTTGATTCAAAGTGAG+TGG | 0.602582 | 4_1:+67163801 | None:intergenic |
| GAAGGTTGGTAAGGTTGCAA+GGG | 0.604709 | 4_1:-67166458 | Msa0566140:CDS |
| ATAAAGCAGTTGTCTAGGGT+GGG | 0.607677 | 4_1:+67163921 | None:intergenic |
| AGACACTGTAAAGAGAATGA+AGG | 0.608249 | 4_1:-67167792 | Msa0566140:intron |
| TTATTGGCGTCACGTCTGAA+GGG | 0.608673 | 4_1:-67166799 | Msa0566140:CDS |
| GGGGATCGGATGGCTCATGA+TGG | 0.613814 | 4_1:+67166429 | None:intergenic |
| TCCACTTATATAGGTTCACA+AGG | 0.616597 | 4_1:-67168549 | Msa0566140:intron |
| ATTCTTCATCCATCTTCGAT+CGG | 0.620407 | 4_1:+67169569 | None:intergenic |
| GTATACGTTGATAACTGGAA+AGG | 0.621367 | 4_1:-67163761 | Msa0566140:intron |
| GATAGAAATGATTATTACGG+AGG | 0.624916 | 4_1:-67169370 | Msa0566140:CDS |
| TCGGAGATCGCAGTCGAAAG+GGG | 0.628674 | 4_1:+67169588 | None:intergenic |
| TTATCAACGTATACATGTTG+AGG | 0.629009 | 4_1:+67163770 | None:intergenic |
| TATTGGCGTCACGTCTGAAG+GGG | 0.631609 | 4_1:-67166798 | Msa0566140:CDS |
| CGGAGATCGCAGTCGAAAGG+GGG | 0.635039 | 4_1:+67169589 | None:intergenic |
| TTACTCTTCTGCAGCACTGG+CGG | 0.636142 | 4_1:+67163143 | None:intergenic |
| GTGCAAAGTATGGATTCCAT+CGG | 0.639245 | 4_1:+67163081 | None:intergenic |
| TTTGTAATAGACTGTTGTTG+AGG | 0.641267 | 4_1:-67169655 | Msa0566140:five_prime_UTR |
| GCACAAGCGAGCATCTGGAG+GGG | 0.644983 | 4_1:+67162948 | None:intergenic |
| TCTTTGCTAGAACCCAAATG+AGG | 0.649689 | 4_1:+67169187 | None:intergenic |
| TATTGCATTTGTATCAACTG+AGG | 0.650673 | 4_1:-67164051 | Msa0566140:CDS |
| AGCTCTCCTAAACCATACAA+AGG | 0.658728 | 4_1:+67167580 | None:intergenic |
| TTGCTAGAACCCAAATGAGG+AGG | 0.659828 | 4_1:+67169190 | None:intergenic |
| ATTCTCCCACAAAAGCAACT+GGG | 0.662559 | 4_1:-67166376 | Msa0566140:CDS |
| TCCATCATACTTGACCAACA+AGG | 0.680703 | 4_1:-67166744 | Msa0566140:intron |
| CTCAAAGAATGCATTCTCAG+TGG | 0.682881 | 4_1:-67169520 | Msa0566140:CDS |
| CAGCTCTGGAAGAAATTCAG+GGG | 0.685860 | 4_1:-67169226 | Msa0566140:CDS |
| GCAACACATAACAAACACAA+AGG | 0.686339 | 4_1:+67163103 | None:intergenic |
| GGTACCTTCAAATGACATGG+AGG | 0.738325 | 4_1:-67168528 | Msa0566140:CDS |
| CGGCACTGAGATCCACAGTG+AGG | 0.743753 | 4_1:+67163163 | None:intergenic |
| TCTCTTGCACGATTTCAAGG+GGG | 0.764721 | 4_1:-67167619 | Msa0566140:CDS |
| TGGCCTTGATGATAACACTG+TGG | 0.768807 | 4_1:-67167876 | Msa0566140:CDS |
| ACAGGTTCTAGACCTCACTG+TGG | 0.826301 | 4_1:-67163175 | Msa0566140:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATATTTTTATTTTTT+TGG | - | chr4_1:67163640-67163659 | Msa0566140:intron | 0.0% |
| !!! | TTTTATATTTTTATTTTTTT+GGG | - | chr4_1:67163641-67163660 | Msa0566140:intron | 0.0% |
| !!! | TTTTTATTATTTTTTTGCTT+AGG | - | chr4_1:67163027-67163046 | Msa0566140:three_prime_UTR | 10.0% |
| !!! | TTTCTTGTTTTTAATTATTT+CGG | - | chr4_1:67163313-67163332 | Msa0566140:intron | 10.0% |
| !! | AATTAATTAAAGCATAATTT+AGG | + | chr4_1:67166370-67166389 | None:intergenic | 10.0% |
| !!! | CTAAATAATATTTTTAAACT+AGG | + | chr4_1:67166928-67166947 | None:intergenic | 10.0% |
| !! | TGAAAAAATAAATAATATTG+AGG | - | chr4_1:67168233-67168252 | Msa0566140:intron | 10.0% |
| !! | AAAATAAATGAATAACCTTA+GGG | + | chr4_1:67163288-67163307 | None:intergenic | 15.0% |
| !! | ATAATTAAAAACAAGAAAAG+CGG | + | chr4_1:67163311-67163330 | None:intergenic | 15.0% |
| !! | ATCTATAAATGGAAATATAA+TGG | + | chr4_1:67164110-67164129 | None:intergenic | 15.0% |
| !! | TTAAAGAAGATATCATATTA+AGG | + | chr4_1:67164217-67164236 | None:intergenic | 15.0% |
| !! | ACAATAATAACTATAAAGTA+AGG | + | chr4_1:67165509-67165528 | None:intergenic | 15.0% |
| !! | GAAAAAAAAATTGAAATTAG+TGG | - | chr4_1:67165857-67165876 | Msa0566140:intron | 15.0% |
| !!! | AATAAATTATCTTTGCATTT+TGG | + | chr4_1:67168203-67168222 | None:intergenic | 15.0% |
| !! | TGCAAAGATAATTTATTATT+TGG | - | chr4_1:67168206-67168225 | Msa0566140:intron | 15.0% |
| !!! | ATTGTTTTATTTTTTTGTCA+TGG | - | chr4_1:67168302-67168321 | Msa0566140:intron | 15.0% |
| !!! | TTGTTTTATTTTTTTGTCAT+GGG | - | chr4_1:67168303-67168322 | Msa0566140:intron | 15.0% |
| !!! | ACATTTTAATAAAAGTGTAT+CGG | + | chr4_1:67168986-67169005 | None:intergenic | 15.0% |
| !!! | TTATATAAGTTGTTTTGTTT+TGG | - | chr4_1:67169407-67169426 | Msa0566140:intron | 15.0% |
| !!! | TAGCTTTATTTGTTTAATTT+TGG | - | chr4_1:67169557-67169576 | Msa0566140:CDS | 15.0% |
| !! | AAAATCAAACATGATTTGAT+TGG | + | chr4_1:67163010-67163029 | None:intergenic | 20.0% |
| !! | ATGGATAGAAATGATTATTA+CGG | - | chr4_1:67163058-67163077 | Msa0566140:three_prime_UTR | 20.0% |
| !!! | TTTTACCTGAATAAGATTAA+GGG | + | chr4_1:67163098-67163117 | None:intergenic | 20.0% |
| !!! | TTTTTACCTGAATAAGATTA+AGG | + | chr4_1:67163099-67163118 | None:intergenic | 20.0% |
| !! | GAAAATAAATGAATAACCTT+AGG | + | chr4_1:67163289-67163308 | None:intergenic | 20.0% |
| !! | TTCAGTTTAAAAATCAAGTT+AGG | - | chr4_1:67163436-67163455 | Msa0566140:intron | 20.0% |
| !! | TATAAATGGAAATATAATGG+AGG | + | chr4_1:67164107-67164126 | None:intergenic | 20.0% |
| !! | CATTGAATTGAATCTATAAA+TGG | + | chr4_1:67164121-67164140 | None:intergenic | 20.0% |
| !! | ATATTACCATATGTATTTGT+AGG | - | chr4_1:67164422-67164441 | Msa0566140:intron | 20.0% |
| !! | TATTACCATATGTATTTGTA+GGG | - | chr4_1:67164423-67164442 | Msa0566140:intron | 20.0% |
| !!! | TTGTTATTCTTTCTGAATTA+TGG | - | chr4_1:67164686-67164705 | Msa0566140:intron | 20.0% |
| !! | TGTTATTCTTTCTGAATTAT+GGG | - | chr4_1:67164687-67164706 | Msa0566140:intron | 20.0% |
| !!! | TATTTATCTTTTATTGGTAC+AGG | - | chr4_1:67164977-67164996 | Msa0566140:intron | 20.0% |
| !! | TATGTAAAAAATTAGTCACT+CGG | - | chr4_1:67165365-67165384 | Msa0566140:intron | 20.0% |
| !! | TTTAAGAGACTATATGTATT+GGG | + | chr4_1:67165432-67165451 | None:intergenic | 20.0% |
| !! | AATAACTATAAAGTAAGGAT+CGG | + | chr4_1:67165504-67165523 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTATTACCTTGT+TGG | + | chr4_1:67165704-67165723 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAACTTCAAGTAA+GGG | + | chr4_1:67165844-67165863 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTAACTTCAAGTA+AGG | + | chr4_1:67165845-67165864 | None:intergenic | 20.0% |
| !!! | TTTTGATTAAAACAATGTTG+CGG | + | chr4_1:67165930-67165949 | None:intergenic | 20.0% |
| !!! | AAGTGAACAATTTTTCTTAA+AGG | - | chr4_1:67166506-67166525 | Msa0566140:intron | 20.0% |
| !!! | AGTGAACAATTTTTCTTAAA+GGG | - | chr4_1:67166507-67166526 | Msa0566140:intron | 20.0% |
| !! | TAAAACTGTTTCAATTCTTT+AGG | + | chr4_1:67166659-67166678 | None:intergenic | 20.0% |
| !! | AAACTGAATATTGAATTCTA+TGG | + | chr4_1:67166715-67166734 | None:intergenic | 20.0% |
| !! | AATATAACTTATTAACCTGA+AGG | + | chr4_1:67166962-67166981 | None:intergenic | 20.0% |
| !! | TTAAATTATTATACTGCTCT+TGG | - | chr4_1:67166993-67167012 | Msa0566140:intron | 20.0% |
| !!! | CTTTTATAGTATTGTTTACT+AGG | + | chr4_1:67168118-67168137 | None:intergenic | 20.0% |
| !! | CTAGTAAACAATACTATAAA+AGG | - | chr4_1:67168116-67168135 | Msa0566140:intron | 20.0% |
| !!! | ATTTTGGTATACATTGTATA+TGG | + | chr4_1:67168187-67168206 | None:intergenic | 20.0% |
| !! | ATAAAACAATCAATGTAACA+AGG | + | chr4_1:67168292-67168311 | None:intergenic | 20.0% |
| !! | TTTACTGTTAATTTCATTGT+GGG | + | chr4_1:67169097-67169116 | None:intergenic | 20.0% |
| !!! | TTGTTTAATTTTGGTACAAA+TGG | - | chr4_1:67169566-67169585 | Msa0566140:exon | 20.0% |
| ! | TTTCAAATATTCCCATAAGT+GGG | + | chr4_1:67163939-67163958 | None:intergenic | 25.0% |
| !! | TTTTCAAATATTCCCATAAG+TGG | + | chr4_1:67163940-67163959 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAATTTCCAA+AGG | + | chr4_1:67164176-67164195 | None:intergenic | 25.0% |
| ! | TATACTTTCGTTCTTAGTAT+AGG | + | chr4_1:67164463-67164482 | None:intergenic | 25.0% |
| ! | AAAGTATAACTTTGTGTGAA+TGG | - | chr4_1:67164475-67164494 | Msa0566140:intron | 25.0% |
| ! | TAACTACAAGTAGGAAATAT+AGG | + | chr4_1:67164783-67164802 | None:intergenic | 25.0% |
| ! | ATATATCCTTTGTATGGTTT+AGG | - | chr4_1:67164845-67164864 | Msa0566140:intron | 25.0% |
| ! | AATAACTTTAGTCCATACAT+TGG | + | chr4_1:67165190-67165209 | None:intergenic | 25.0% |
| !! | ATTTTCTTCGAAATATGTTG+AGG | + | chr4_1:67165236-67165255 | None:intergenic | 25.0% |
| !! | ATACAAAGACTTTTATTGAG+CGG | - | chr4_1:67165294-67165313 | Msa0566140:intron | 25.0% |
| ! | TTAAGAGACTATATGTATTG+GGG | + | chr4_1:67165431-67165450 | None:intergenic | 25.0% |
| ! | GTTTAAGAGACTATATGTAT+TGG | + | chr4_1:67165433-67165452 | None:intergenic | 25.0% |
| ! | TTTGTTAAGTAGCTTTCAAA+TGG | - | chr4_1:67165473-67165492 | Msa0566140:intron | 25.0% |
| ! | AATTATTCTGCTTTAATTCC+AGG | - | chr4_1:67165585-67165604 | Msa0566140:intron | 25.0% |
| !!! | TTTTTAATTTTCCTAACAGC+AGG | + | chr4_1:67166129-67166148 | None:intergenic | 25.0% |
| ! | ACTCAAAGTTCTTACAAATA+TGG | + | chr4_1:67166216-67166235 | None:intergenic | 25.0% |
| !!! | TTCTCTAAAATATGTCTCAT+GGG | + | chr4_1:67166438-67166457 | None:intergenic | 25.0% |
| !!! | ATTCTCTAAAATATGTCTCA+TGG | + | chr4_1:67166439-67166458 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATATGAGAC+AGG | - | chr4_1:67166544-67166563 | Msa0566140:intron | 25.0% |
| !! | AAATGATTTTCATGTATGAG+TGG | + | chr4_1:67166593-67166612 | None:intergenic | 25.0% |
| !! | TTTAAACTAGGTTGAATACT+AGG | + | chr4_1:67166916-67166935 | None:intergenic | 25.0% |
| !! | TTTTCTTTCATTGAGTGTTT+TGG | - | chr4_1:67167147-67167166 | Msa0566140:intron | 25.0% |
| ! | CCTGTTTATACTAATATACT+AGG | + | chr4_1:67168011-67168030 | None:intergenic | 25.0% |
| ! | CCTAGTATATTAGTATAAAC+AGG | - | chr4_1:67168008-67168027 | Msa0566140:intron | 25.0% |
| !!! | TAAAAGGTTCTTTTCTAGTT+AGG | - | chr4_1:67168132-67168151 | Msa0566140:intron | 25.0% |
| !!! | AAAAGGTTCTTTTCTAGTTA+GGG | - | chr4_1:67168133-67168152 | Msa0566140:intron | 25.0% |
| !! | ATGCAATAAATTTTCCCTTT+GGG | + | chr4_1:67168368-67168387 | None:intergenic | 25.0% |
| !! | AATGCAATAAATTTTCCCTT+TGG | + | chr4_1:67168369-67168388 | None:intergenic | 25.0% |
| ! | TCAAAAAATATCTCATCAAC+AGG | + | chr4_1:67168459-67168478 | None:intergenic | 25.0% |
| ! | CATAAAACTAAATTGTCACT+TGG | + | chr4_1:67168708-67168727 | None:intergenic | 25.0% |
| !! | TTTATGTGCTTGATTTTACT+TGG | - | chr4_1:67168722-67168741 | Msa0566140:CDS | 25.0% |
| !! | TCGAACATATCATTATCTTT+TGG | - | chr4_1:67168791-67168810 | Msa0566140:intron | 25.0% |
| !!! | TTTCAAGTTGCATTGAATTT+TGG | - | chr4_1:67168832-67168851 | Msa0566140:intron | 25.0% |
| ! | GTTTACTGTTAATTTCATTG+TGG | + | chr4_1:67169098-67169117 | None:intergenic | 25.0% |
| ! | CACATTAAGAATTCAAAATC+AGG | + | chr4_1:67169226-67169245 | None:intergenic | 25.0% |
| !! | CTGATTTTGAATTCTTAATG+TGG | - | chr4_1:67169224-67169243 | Msa0566140:CDS | 25.0% |
| TTTGTAATAGACTGTTGTTG+AGG | - | chr4_1:67162776-67162795 | Msa0566140:three_prime_UTR | 30.0% | |
| !! | CGATCTTGATTTGATTTGAT+TGG | + | chr4_1:67162809-67162828 | None:intergenic | 30.0% |
| GATAGAAATGATTATTACGG+AGG | - | chr4_1:67163061-67163080 | Msa0566140:three_prime_UTR | 30.0% | |
| TTATTTGTATGATTCAGCTC+TGG | - | chr4_1:67163191-67163210 | Msa0566140:intron | 30.0% | |
| TAATATCGATATGAACCCTA+AGG | - | chr4_1:67163270-67163289 | Msa0566140:intron | 30.0% | |
| !! | GATTCAGCTAGAATTGATTT+TGG | + | chr4_1:67163564-67163583 | None:intergenic | 30.0% |
| ! | TTTGGGTGTTTAGTTCATTA+TGG | - | chr4_1:67163658-67163677 | Msa0566140:intron | 30.0% |
| CTTTGTCTTTAACAAAGCAA+AGG | - | chr4_1:67163757-67163776 | Msa0566140:intron | 30.0% | |
| ! | CTTTACACATTGATTGCATT+GGG | - | chr4_1:67163800-67163819 | Msa0566140:CDS | 30.0% |
| !! | TGATGTATTGATTGCGTTAT+TGG | - | chr4_1:67163851-67163870 | Msa0566140:intron | 30.0% |
| TTCAAATATTCCCATAAGTG+GGG | + | chr4_1:67163938-67163957 | None:intergenic | 30.0% | |
| TGTGGTGATTTACGATAAAT+TGG | - | chr4_1:67164336-67164355 | Msa0566140:intron | 30.0% | |
| AAAGCTTCATCTATTCCATT+TGG | - | chr4_1:67164723-67164742 | Msa0566140:intron | 30.0% | |
| AATAAAGCTAAGGATCCAAA+TGG | + | chr4_1:67164741-67164760 | None:intergenic | 30.0% | |
| AAGCACACAAAATAAAGCTA+AGG | + | chr4_1:67164751-67164770 | None:intergenic | 30.0% | |
| ! | TATTTTGTGTGCTTATCCAT+TGG | - | chr4_1:67164757-67164776 | Msa0566140:intron | 30.0% |
| CCATACAAAGGATATATGTA+AGG | + | chr4_1:67164842-67164861 | None:intergenic | 30.0% | |
| CCTTACATATATCCTTTGTA+TGG | - | chr4_1:67164839-67164858 | Msa0566140:intron | 30.0% | |
| !!! | CAGTAGAAACATGTTTTGAT+TGG | - | chr4_1:67165163-67165182 | Msa0566140:intron | 30.0% |
| ! | TACAAAGACTTTTATTGAGC+GGG | - | chr4_1:67165295-67165314 | Msa0566140:intron | 30.0% |
| AAATTAGTCACTCGGTTATT+TGG | - | chr4_1:67165373-67165392 | Msa0566140:intron | 30.0% | |
| GCTAGTTACATTCTTTCTTT+CGG | - | chr4_1:67165555-67165574 | Msa0566140:intron | 30.0% | |
| !!! | ACAAACAAGTTTTTTGCACT+TGG | + | chr4_1:67165665-67165684 | None:intergenic | 30.0% |
| ACTATTAGCATAGCAACTTT+AGG | + | chr4_1:67165789-67165808 | None:intergenic | 30.0% | |
| ACTGCAATATTTCCTTCTAA+AGG | - | chr4_1:67165811-67165830 | Msa0566140:intron | 30.0% | |
| AAAATTTCCACCATTTCAAC+AGG | - | chr4_1:67165946-67165965 | Msa0566140:intron | 30.0% | |
| GTAAAATATTTCCTGCTGTT+AGG | - | chr4_1:67166115-67166134 | Msa0566140:intron | 30.0% | |
| ACAATTCTAAGTTCTTCCAA+CGG | - | chr4_1:67166163-67166182 | Msa0566140:intron | 30.0% | |
| TGCTTATATTCAAGACTAGA+GGG | + | chr4_1:67166273-67166292 | None:intergenic | 30.0% | |
| TTGCTTATATTCAAGACTAG+AGG | + | chr4_1:67166274-67166293 | None:intergenic | 30.0% | |
| ! | AACAAAATCGTCATGTTTTG+TGG | - | chr4_1:67166292-67166311 | Msa0566140:intron | 30.0% |
| !! | ACAATGTTTTGGATATCAGT+TGG | + | chr4_1:67166628-67166647 | None:intergenic | 30.0% |
| !! | TTCTATGGCTTTGTTGAATA+TGG | + | chr4_1:67166700-67166719 | None:intergenic | 30.0% |
| TTGAAAAGCTGATATGATTG+TGG | - | chr4_1:67166751-67166770 | Msa0566140:CDS | 30.0% | |
| TACTAGTTATACGCTTATAC+TGG | - | chr4_1:67166890-67166909 | Msa0566140:intron | 30.0% | |
| TTAGTATAAATAGGACCTTC+AGG | - | chr4_1:67166944-67166963 | Msa0566140:intron | 30.0% | |
| TTATATTCTTGTCCAACTGA+TGG | - | chr4_1:67167083-67167102 | Msa0566140:intron | 30.0% | |
| TAGTTGTAGAATTCTACAAC+AGG | - | chr4_1:67167601-67167620 | Msa0566140:CDS | 30.0% | |
| TCAGAAACATACAATGTTAG+TGG | - | chr4_1:67167954-67167973 | Msa0566140:intron | 30.0% | |
| !! | TACAATGTTAGTGGTCTTAT+TGG | - | chr4_1:67167963-67167982 | Msa0566140:intron | 30.0% |
| TACTAATATACTAGGTCAAC+AGG | + | chr4_1:67168003-67168022 | None:intergenic | 30.0% | |
| TTAGTATAAACAGGACCATT+AGG | - | chr4_1:67168017-67168036 | Msa0566140:intron | 30.0% | |
| ATATTGAAATGCTGACCTAA+TGG | + | chr4_1:67168035-67168054 | None:intergenic | 30.0% | |
| GAATGATTGCAAATATCCAT+AGG | + | chr4_1:67168163-67168182 | None:intergenic | 30.0% | |
| !!! | TTTATTTTTTTGTCATGGGC+AGG | - | chr4_1:67168307-67168326 | Msa0566140:intron | 30.0% |
| TATTGCATTTGTATCAACTG+AGG | - | chr4_1:67168380-67168399 | Msa0566140:intron | 30.0% | |
| TTATCAACGTATACATGTTG+AGG | + | chr4_1:67168664-67168683 | None:intergenic | 30.0% | |
| !! | AACATGTATACGTTGATAAC+TGG | - | chr4_1:67168665-67168684 | Msa0566140:intron | 30.0% |
| CTGCTATTGTTACACTATAA+CGG | - | chr4_1:67168762-67168781 | Msa0566140:CDS | 30.0% | |
| GATAATTTACTAGTGACTGT+CGG | - | chr4_1:67169023-67169042 | Msa0566140:intron | 30.0% | |
| TGAAATTAACAGTAAACCCA+TGG | - | chr4_1:67169101-67169120 | Msa0566140:intron | 30.0% | |
| TTAATGTGGTGAATTTGAAC+AGG | - | chr4_1:67169238-67169257 | Msa0566140:intron | 30.0% | |
| ACATTTAACAAACGAGCAAT+TGG | + | chr4_1:67169614-67169633 | None:intergenic | 30.0% | |
| AAGACACGACAACTATTTAT+GGG | - | chr4_1:67169655-67169674 | Msa0566140:five_prime_UTR | 30.0% | |
| ATTCTTCATCCATCTTCGAT+CGG | + | chr4_1:67162865-67162884 | None:intergenic | 35.0% | |
| AGAATACGATGTAATCGTTC+TGG | - | chr4_1:67162880-67162899 | Msa0566140:three_prime_UTR | 35.0% | |
| GAATACGATGTAATCGTTCT+GGG | - | chr4_1:67162881-67162900 | Msa0566140:three_prime_UTR | 35.0% | |
| !! | TTGAAGTGTTGGTTACTTTG+AGG | + | chr4_1:67162955-67162974 | None:intergenic | 35.0% |
| ! | TGAAATCAGTGTTGAAGTGT+TGG | + | chr4_1:67162966-67162985 | None:intergenic | 35.0% |
| ! | TTTTGCTTAGGTTCTTCACA+TGG | - | chr4_1:67163039-67163058 | Msa0566140:three_prime_UTR | 35.0% |
| CTGAATAAGATTAAGGGAAG+TGG | + | chr4_1:67163092-67163111 | None:intergenic | 35.0% | |
| CACTTCCCTTAATCTTATTC+AGG | - | chr4_1:67163090-67163109 | Msa0566140:three_prime_UTR | 35.0% | |
| AGTGAGAGTTGAATGTAAAC+TGG | - | chr4_1:67163380-67163399 | Msa0566140:intron | 35.0% | |
| !! | TCAGCTAGAATTGATTTTGG+AGG | + | chr4_1:67163561-67163580 | None:intergenic | 35.0% |
| ! | GTTTAGTTCATTATGGCCAA+TGG | - | chr4_1:67163665-67163684 | Msa0566140:intron | 35.0% |
| GTATCTCTATTTCAAAGCTG+TGG | - | chr4_1:67163727-67163746 | Msa0566140:intron | 35.0% | |
| ! | GCTTTACACATTGATTGCAT+TGG | - | chr4_1:67163799-67163818 | Msa0566140:CDS | 35.0% |
| ! | TTGCATTGGGAAATCTGTTT+TGG | - | chr4_1:67163813-67163832 | Msa0566140:CDS | 35.0% |
| !! | TGTATTGATTGCGTTATTGG+TGG | - | chr4_1:67163854-67163873 | Msa0566140:intron | 35.0% |
| !! | GTATTGATTGCGTTATTGGT+GGG | - | chr4_1:67163855-67163874 | Msa0566140:intron | 35.0% |
| GTGGGAAATTCCACTTATAT+AGG | - | chr4_1:67163873-67163892 | Msa0566140:intron | 35.0% | |
| TCCACTTATATAGGTTCACA+AGG | - | chr4_1:67163882-67163901 | Msa0566140:intron | 35.0% | |
| ACCTTGTGAACCTATATAAG+TGG | + | chr4_1:67163886-67163905 | None:intergenic | 35.0% | |
| ACTGATCCTAAAACTCATGA+TGG | - | chr4_1:67164006-67164025 | Msa0566140:CDS | 35.0% | |
| CTGATCCTAAAACTCATGAT+GGG | - | chr4_1:67164007-67164026 | Msa0566140:CDS | 35.0% | |
| ! | TACAGAGTACTAAGGCAAAA+GGG | + | chr4_1:67164149-67164168 | None:intergenic | 35.0% |
| ! | ATACAGAGTACTAAGGCAAA+AGG | + | chr4_1:67164150-67164169 | None:intergenic | 35.0% |
| ! | AAGGACTATACAGAGTACTA+AGG | + | chr4_1:67164157-67164176 | None:intergenic | 35.0% |
| TAGTACTCTGTATAGTCCTT+TGG | - | chr4_1:67164157-67164176 | Msa0566140:intron | 35.0% | |
| CATATTAAGGTCGAAAGACA+TGG | + | chr4_1:67164204-67164223 | None:intergenic | 35.0% | |
| ACCATATGTATTTGTAGGGT+AGG | - | chr4_1:67164427-67164446 | Msa0566140:intron | 35.0% | |
| ACCTACCCTACAAATACATA+TGG | + | chr4_1:67164431-67164450 | None:intergenic | 35.0% | |
| TTGACCCATGACAGAAAATT+TGG | - | chr4_1:67164535-67164554 | Msa0566140:intron | 35.0% | |
| ! | AAGGCCAAATTTTCTGTCAT+GGG | + | chr4_1:67164542-67164561 | None:intergenic | 35.0% |
| AATCCACAGTGTTATCATCA+AGG | + | chr4_1:67164561-67164580 | None:intergenic | 35.0% | |
| GATAACACTGTGGATTTCAT+TGG | - | chr4_1:67164565-67164584 | Msa0566140:intron | 35.0% | |
| AGACACTGTAAAGAGAATGA+AGG | - | chr4_1:67164639-67164658 | Msa0566140:intron | 35.0% | |
| AAGTAGGAAATATAGGCCAA+TGG | + | chr4_1:67164776-67164795 | None:intergenic | 35.0% | |
| CTCTGCATATAACTACAAGT+AGG | + | chr4_1:67164792-67164811 | None:intergenic | 35.0% | |
| TGGATAAACAGATGTAGACA+GGG | + | chr4_1:67164888-67164907 | None:intergenic | 35.0% | |
| ATGGATAAACAGATGTAGAC+AGG | + | chr4_1:67164889-67164908 | None:intergenic | 35.0% | |
| TAACACACTACATTCTCAAC+AGG | + | chr4_1:67164930-67164949 | None:intergenic | 35.0% | |
| ! | TGTTAGATTTGTTCTGCTCA+TGG | - | chr4_1:67164945-67164964 | Msa0566140:intron | 35.0% |
| GTTGAATAAACCTGAATGCA+AGG | - | chr4_1:67165040-67165059 | Msa0566140:intron | 35.0% | |
| AGTATATCTACCTTGCATTC+AGG | + | chr4_1:67165053-67165072 | None:intergenic | 35.0% | |
| ATTCACACTAATGTGTGACT+TGG | - | chr4_1:67165117-67165136 | Msa0566140:intron | 35.0% | |
| !!! | GTTTTGATTGGTCCAATGTA+TGG | - | chr4_1:67165175-67165194 | Msa0566140:intron | 35.0% |
| TATTCTGCTTTAATTCCAGG+TGG | - | chr4_1:67165588-67165607 | Msa0566140:intron | 35.0% | |
| ! | GGAATTTGATGATCAAGGAA+AGG | - | chr4_1:67165609-67165628 | Msa0566140:intron | 35.0% |
| GATGATCAAGGAAAGGTTAT+TGG | - | chr4_1:67165616-67165635 | Msa0566140:intron | 35.0% | |
| GGTTGCAAGTAGTCAAAAAT+AGG | + | chr4_1:67165728-67165747 | None:intergenic | 35.0% | |
| AGTTTCACTATAACCTGAAC+TGG | + | chr4_1:67165749-67165768 | None:intergenic | 35.0% | |
| !! | ATCTCTGAAATGACACTTGA+TGG | - | chr4_1:67165900-67165919 | Msa0566140:intron | 35.0% |
| TGACTTACATGTCTGACTTT+CGG | + | chr4_1:67166081-67166100 | None:intergenic | 35.0% | |
| TTGCTTATATATGAGACAGG+AGG | - | chr4_1:67166547-67166566 | Msa0566140:intron | 35.0% | |
| TGCTTATATATGAGACAGGA+GGG | - | chr4_1:67166548-67166567 | Msa0566140:intron | 35.0% | |
| ! | AGGCATTCATCACAATGTTT+TGG | + | chr4_1:67166639-67166658 | None:intergenic | 35.0% |
| AAAAGCTGATATGATTGTGG+TGG | - | chr4_1:67166754-67166773 | Msa0566140:CDS | 35.0% | |
| AAAGCTGATATGATTGTGGT+GGG | - | chr4_1:67166755-67166774 | Msa0566140:CDS | 35.0% | |
| GAAGAAAAGAACCAAAAGAG+AGG | + | chr4_1:67167036-67167055 | None:intergenic | 35.0% | |
| AACAGCTTAAGTAGAGAAAG+AGG | + | chr4_1:67167120-67167139 | None:intergenic | 35.0% | |
| TTAGCACTAGATCAGTTAAG+TGG | + | chr4_1:67167190-67167209 | None:intergenic | 35.0% | |
| TTCCCCAAATTGATCTACTT+GGG | - | chr4_1:67167231-67167250 | Msa0566140:intron | 35.0% | |
| TACCCAAGTAGATCAATTTG+GGG | + | chr4_1:67167236-67167255 | None:intergenic | 35.0% | |
| GTACCCAAGTAGATCAATTT+GGG | + | chr4_1:67167237-67167256 | None:intergenic | 35.0% | |
| AGTACCCAAGTAGATCAATT+TGG | + | chr4_1:67167238-67167257 | None:intergenic | 35.0% | |
| ! | AATTGCAATCACTGGGTTTT+GGG | - | chr4_1:67167267-67167286 | Msa0566140:intron | 35.0% |
| GAGCTGCTCAACTATTTATA+TGG | - | chr4_1:67167396-67167415 | Msa0566140:CDS | 35.0% | |
| TTATTAAGGCCGAGTAGATT+TGG | + | chr4_1:67167561-67167580 | None:intergenic | 35.0% | |
| AGACAGGAGAAGGATTATTA+AGG | + | chr4_1:67167575-67167594 | None:intergenic | 35.0% | |
| TATGGAGAACATGTTATCGT+AGG | - | chr4_1:67167658-67167677 | Msa0566140:intron | 35.0% | |
| TCAAAAAGTCCCATGCTTAT+TGG | + | chr4_1:67167700-67167719 | None:intergenic | 35.0% | |
| ! | GCATGGGACTTTTTGAATTA+TGG | - | chr4_1:67167704-67167723 | Msa0566140:intron | 35.0% |
| CAACTAAGAGAGGATTCTAA+TGG | - | chr4_1:67167930-67167949 | Msa0566140:intron | 35.0% | |
| CGAAATAAAGCAGTTGTCTA+GGG | + | chr4_1:67168517-67168536 | None:intergenic | 35.0% | |
| TCGAAATAAAGCAGTTGTCT+AGG | + | chr4_1:67168518-67168537 | None:intergenic | 35.0% | |
| !! | TACTGTTGATTCAAAGTGAG+TGG | + | chr4_1:67168633-67168652 | None:intergenic | 35.0% |
| TCACTTTGAATCAACAGTAC+TGG | - | chr4_1:67168634-67168653 | Msa0566140:intron | 35.0% | |
| !! | GTATACGTTGATAACTGGAA+AGG | - | chr4_1:67168670-67168689 | Msa0566140:intron | 35.0% |
| TGTCAGGAATAAGAAAGATG+AGG | + | chr4_1:67168865-67168884 | None:intergenic | 35.0% | |
| GCAACACATAACAAACACAA+AGG | + | chr4_1:67169331-67169350 | None:intergenic | 35.0% | |
| TCGTTGTAAAGTGCAAAGTA+TGG | + | chr4_1:67169363-67169382 | None:intergenic | 35.0% | |
| ! | TGTAGAACAGATTTGTTTGC+AGG | - | chr4_1:67169450-67169469 | Msa0566140:intron | 35.0% |
| ! | GTAGAACAGATTTGTTTGCA+GGG | - | chr4_1:67169451-67169470 | Msa0566140:intron | 35.0% |
| CAAGACACGACAACTATTTA+TGG | - | chr4_1:67169654-67169673 | Msa0566140:five_prime_UTR | 35.0% | |
| TTCAGACTGCTTCTTCTACT+CGG | + | chr4_1:67162745-67162764 | None:intergenic | 40.0% | |
| CTCAAAGAATGCATTCTCAG+TGG | - | chr4_1:67162911-67162930 | Msa0566140:three_prime_UTR | 40.0% | |
| !! | TTCAGCTCTGGAAGAAATTC+AGG | - | chr4_1:67163203-67163222 | Msa0566140:intron | 40.0% |
| !! | TCAGCTCTGGAAGAAATTCA+GGG | - | chr4_1:67163204-67163223 | Msa0566140:intron | 40.0% |
| TCTTTGCTAGAACCCAAATG+AGG | + | chr4_1:67163247-67163266 | None:intergenic | 40.0% | |
| TCCTAGCTTCACGTTAGAAT+CGG | - | chr4_1:67163475-67163494 | Msa0566140:intron | 40.0% | |
| ! | CTTCACGTTAGAATCGGTTT+CGG | - | chr4_1:67163481-67163500 | Msa0566140:intron | 40.0% |
| ! | AACCCTCACTAAAGTACCAT+TGG | + | chr4_1:67163684-67163703 | None:intergenic | 40.0% |
| CTCTATTTCAAAGCTGTGGA+TGG | - | chr4_1:67163731-67163750 | Msa0566140:intron | 40.0% | |
| ! | CAAGGTACCTTCAAATGACA+TGG | - | chr4_1:67163900-67163919 | Msa0566140:intron | 40.0% |
| ! | AAAGCCTCCATGTCATTTGA+AGG | + | chr4_1:67163910-67163929 | None:intergenic | 40.0% |
| AAATGAAAAACTTGCGTGCG+CGG | + | chr4_1:67163966-67163985 | None:intergenic | 40.0% | |
| ! | TCCTAAAACTCATGATGGGA+TGG | - | chr4_1:67164011-67164030 | Msa0566140:CDS | 40.0% |
| ! | TCCATCCCATCATGAGTTTT+AGG | + | chr4_1:67164015-67164034 | None:intergenic | 40.0% |
| CTTGACAAGAGTCACTACTA+AGG | - | chr4_1:67164035-67164054 | Msa0566140:CDS | 40.0% | |
| GAATTCAAATTCCAAGCGTG+TGG | - | chr4_1:67164318-67164337 | Msa0566140:intron | 40.0% | |
| ! | CAAGGCCAAATTTTCTGTCA+TGG | + | chr4_1:67164543-67164562 | None:intergenic | 40.0% |
| GGATTTCATTGGTCATGCTT+TGG | - | chr4_1:67164576-67164595 | Msa0566140:intron | 40.0% | |
| AGTCTCTTGCACGATTTCAA+GGG | - | chr4_1:67164810-67164829 | Msa0566140:intron | 40.0% | |
| AGCTCTCCTAAACCATACAA+AGG | + | chr4_1:67164854-67164873 | None:intergenic | 40.0% | |
| ATTCTCAACAGGAGATAGAG+CGG | + | chr4_1:67164919-67164938 | None:intergenic | 40.0% | |
| TATTGGTACAGGCATTTGCA+CGG | - | chr4_1:67164988-67165007 | Msa0566140:intron | 40.0% | |
| GAGACTATATGTATTGGGGT+TGG | + | chr4_1:67165427-67165446 | None:intergenic | 40.0% | |
| CTTGATCATCAAATTCCACC+TGG | + | chr4_1:67165606-67165625 | None:intergenic | 40.0% | |
| ! | CAGGTGGAATTTGATGATCA+AGG | - | chr4_1:67165604-67165623 | Msa0566140:intron | 40.0% |
| TCCATCATACTTGACCAACA+AGG | - | chr4_1:67165687-67165706 | Msa0566140:intron | 40.0% | |
| ACCTTGTTGGTCAAGTATGA+TGG | + | chr4_1:67165691-67165710 | None:intergenic | 40.0% | |
| AAGGGCAAACTTCCTTTAGA+AGG | + | chr4_1:67165826-67165845 | None:intergenic | 40.0% | |
| !! | GAGAATAACTTGCACCGATT+GGG | + | chr4_1:67166041-67166060 | None:intergenic | 40.0% |
| TATTCTCCCACAAAAGCAAC+TGG | - | chr4_1:67166054-67166073 | Msa0566140:intron | 40.0% | |
| ATTCTCCCACAAAAGCAACT+GGG | - | chr4_1:67166055-67166074 | Msa0566140:intron | 40.0% | |
| !! | CAACGGCTTTGGATTTCTTA+GGG | - | chr4_1:67166180-67166199 | Msa0566140:intron | 40.0% |
| GGATTTCTTAGGGATGGTAA+TGG | - | chr4_1:67166190-67166209 | Msa0566140:intron | 40.0% | |
| ! | TCTCATGGGAACTTGTTTCA+TGG | + | chr4_1:67166424-67166443 | None:intergenic | 40.0% |
| ! | TGTCCAACTGATGGCTATTT+TGG | - | chr4_1:67167092-67167111 | Msa0566140:intron | 40.0% |
| GGGAACATATCTCAATGTGT+TGG | + | chr4_1:67167216-67167235 | None:intergenic | 40.0% | |
| GTTCCCCAAATTGATCTACT+TGG | - | chr4_1:67167230-67167249 | Msa0566140:intron | 40.0% | |
| TCACTGTCAATTGCAATCAC+TGG | - | chr4_1:67167259-67167278 | Msa0566140:intron | 40.0% | |
| CACTGTCAATTGCAATCACT+GGG | - | chr4_1:67167260-67167279 | Msa0566140:intron | 40.0% | |
| ! | CAATTGCAATCACTGGGTTT+TGG | - | chr4_1:67167266-67167285 | Msa0566140:intron | 40.0% |
| TTTGCAAATGAACAGCACCA+GGG | + | chr4_1:67167341-67167360 | None:intergenic | 40.0% | |
| ATTTGCAAATGAACAGCACC+AGG | + | chr4_1:67167342-67167361 | None:intergenic | 40.0% | |
| GTTGAGCAGCTCTACAATTA+GGG | + | chr4_1:67167388-67167407 | None:intergenic | 40.0% | |
| AGTTGAGCAGCTCTACAATT+AGG | + | chr4_1:67167389-67167408 | None:intergenic | 40.0% | |
| CTCACTCTCAGATAATCCAT+CGG | - | chr4_1:67167441-67167460 | Msa0566140:intron | 40.0% | |
| ATCCTTTCTCGAAGGATGTA+AGG | - | chr4_1:67167535-67167554 | Msa0566140:intron | 40.0% | |
| GATGTAAGGCCAAATCTACT+CGG | - | chr4_1:67167549-67167568 | Msa0566140:intron | 40.0% | |
| TCTACAACTAGAACAGAGAC+AGG | + | chr4_1:67167591-67167610 | None:intergenic | 40.0% | |
| AAACTCCATACTGGGAAACA+TGG | + | chr4_1:67167627-67167646 | None:intergenic | 40.0% | |
| TGTTTCCCAGTATGGAGTTT+CGG | - | chr4_1:67167627-67167646 | Msa0566140:CDS | 40.0% | |
| TAAACCCGAAACTCCATACT+GGG | + | chr4_1:67167635-67167654 | None:intergenic | 40.0% | |
| ATAAACCCGAAACTCCATAC+TGG | + | chr4_1:67167636-67167655 | None:intergenic | 40.0% | |
| !! | GGAGTTTCGGGTTTATTGTA+TGG | - | chr4_1:67167640-67167659 | Msa0566140:intron | 40.0% |
| ATGCTTATTGGACATCAGGA+TGG | + | chr4_1:67167688-67167707 | None:intergenic | 40.0% | |
| ATCCTGATGTCCAATAAGCA+TGG | - | chr4_1:67167687-67167706 | Msa0566140:intron | 40.0% | |
| TCCTGATGTCCAATAAGCAT+GGG | - | chr4_1:67167688-67167707 | Msa0566140:intron | 40.0% | |
| ! | GACTGGGATAGCATTGTTTT+CGG | + | chr4_1:67167870-67167889 | None:intergenic | 40.0% |
| TGCTTCTACTCAACTAAGAG+AGG | - | chr4_1:67167920-67167939 | Msa0566140:intron | 40.0% | |
| !!! | GGTTCTTTTCTAGTTAGGGT+AGG | - | chr4_1:67168137-67168156 | Msa0566140:intron | 40.0% |
| GAGAATACGAGCAACAGAAT+AGG | + | chr4_1:67168335-67168354 | None:intergenic | 40.0% | |
| TTCTCACAATGTTTGCCCAA+AGG | - | chr4_1:67168350-67168369 | Msa0566140:intron | 40.0% | |
| TCTCACAATGTTTGCCCAAA+GGG | - | chr4_1:67168351-67168370 | Msa0566140:intron | 40.0% | |
| AAACCTGGAATTGACCTTCT+AGG | - | chr4_1:67168432-67168451 | Msa0566140:CDS | 40.0% | |
| ! | ATAAAGCAGTTGTCTAGGGT+GGG | + | chr4_1:67168513-67168532 | None:intergenic | 40.0% |
| AATAAAGCAGTTGTCTAGGG+TGG | + | chr4_1:67168514-67168533 | None:intergenic | 40.0% | |
| ! | CAAATTTTCAGCCATACAGC+TGG | + | chr4_1:67168890-67168909 | None:intergenic | 40.0% |
| AATTTACTAGTGACTGTCGG+TGG | - | chr4_1:67169026-67169045 | Msa0566140:intron | 40.0% | |
| ATTTACTAGTGACTGTCGGT+GGG | - | chr4_1:67169027-67169046 | Msa0566140:intron | 40.0% | |
| GATTTCCATGCTTAGCCAAA+GGG | + | chr4_1:67169149-67169168 | None:intergenic | 40.0% | |
| AGATTTCCATGCTTAGCCAA+AGG | + | chr4_1:67169150-67169169 | None:intergenic | 40.0% | |
| !! | CTCGAATCTCGATTGTTTTG+TGG | - | chr4_1:67169192-67169211 | Msa0566140:CDS | 40.0% |
| !! | TGTTTGTTATGTGTTGCCGA+TGG | - | chr4_1:67169334-67169353 | Msa0566140:intron | 40.0% |
| GTGCAAAGTATGGATTCCAT+CGG | + | chr4_1:67169353-67169372 | None:intergenic | 40.0% | |
| GAGTAGAAGAAGCAGTCTGA+AGG | - | chr4_1:67162744-67162763 | Msa0566140:three_prime_UTR | 45.0% | |
| !! | GATGTAATCGTTCTGGGAAC+TGG | - | chr4_1:67162887-67162906 | Msa0566140:three_prime_UTR | 45.0% |
| !! | CAGCTCTGGAAGAAATTCAG+GGG | - | chr4_1:67163205-67163224 | Msa0566140:intron | 45.0% |
| TTGCTAGAACCCAAATGAGG+AGG | + | chr4_1:67163244-67163263 | None:intergenic | 45.0% | |
| ! | ACCGATTCTAACGTGAAGCT+AGG | + | chr4_1:67163479-67163498 | None:intergenic | 45.0% |
| TGGCCAATGGTACTTTAGTG+AGG | - | chr4_1:67163678-67163697 | Msa0566140:intron | 45.0% | |
| GGCCAATGGTACTTTAGTGA+GGG | - | chr4_1:67163679-67163698 | Msa0566140:intron | 45.0% | |
| GGTACCTTCAAATGACATGG+AGG | - | chr4_1:67163903-67163922 | Msa0566140:intron | 45.0% | |
| !! | GCTTTGAAGTCCCCACTTAT+GGG | - | chr4_1:67163925-67163944 | Msa0566140:CDS | 45.0% |
| ! | AGAGTACTAAGGCAAAAGGG+TGG | + | chr4_1:67164146-67164165 | None:intergenic | 45.0% |
| ATCGTAAATCACCACACGCT+TGG | + | chr4_1:67164332-67164351 | None:intergenic | 45.0% | |
| GGGTCAACAAGAAAGGCAAA+AGG | + | chr4_1:67164522-67164541 | None:intergenic | 45.0% | |
| CTGTCATGGGTCAACAAGAA+AGG | + | chr4_1:67164529-67164548 | None:intergenic | 45.0% | |
| ! | TGGCCTTGATGATAACACTG+TGG | - | chr4_1:67164555-67164574 | Msa0566140:intron | 45.0% |
| CTCTTTACAGTGTCTAGTGC+TGG | + | chr4_1:67164634-67164653 | None:intergenic | 45.0% | |
| GAGAATGAAGGTAAGTGTGC+TGG | - | chr4_1:67164651-67164670 | Msa0566140:intron | 45.0% | |
| GAGTCTCTTGCACGATTTCA+AGG | - | chr4_1:67164809-67164828 | Msa0566140:intron | 45.0% | |
| GTCTCTTGCACGATTTCAAG+GGG | - | chr4_1:67164811-67164830 | Msa0566140:intron | 45.0% | |
| TCTCTTGCACGATTTCAAGG+GGG | - | chr4_1:67164812-67164831 | Msa0566140:intron | 45.0% | |
| TTATTGGCGTCACGTCTGAA+GGG | - | chr4_1:67165632-67165651 | Msa0566140:intron | 45.0% | |
| TGACTACTTGCAACCAGTTC+AGG | - | chr4_1:67165733-67165752 | Msa0566140:intron | 45.0% | |
| TTCCACCATTTCAACAGGTG+AGG | - | chr4_1:67165951-67165970 | Msa0566140:intron | 45.0% | |
| TTCCTCACCTGTTGAAATGG+TGG | + | chr4_1:67165956-67165975 | None:intergenic | 45.0% | |
| ACCATTTCAACAGGTGAGGA+AGG | - | chr4_1:67165955-67165974 | Msa0566140:intron | 45.0% | |
| ACCTTCCTCACCTGTTGAAA+TGG | + | chr4_1:67165959-67165978 | None:intergenic | 45.0% | |
| TTTCAACAGGTGAGGAAGGT+TGG | - | chr4_1:67165959-67165978 | Msa0566140:intron | 45.0% | |
| !! | GAAGGTTGGTAAGGTTGCAA+GGG | - | chr4_1:67165973-67165992 | Msa0566140:intron | 45.0% |
| !! | ATTGGGAGTCATTGGTGTTG+GGG | + | chr4_1:67166024-67166043 | None:intergenic | 45.0% |
| ! | GATTGGGAGTCATTGGTGTT+GGG | + | chr4_1:67166025-67166044 | None:intergenic | 45.0% |
| CAACACCAATGACTCCCAAT+CGG | - | chr4_1:67166024-67166043 | Msa0566140:intron | 45.0% | |
| ! | GGAGAATAACTTGCACCGAT+TGG | + | chr4_1:67166042-67166061 | None:intergenic | 45.0% |
| CTAAGTTCTTCCAACGGCTT+TGG | - | chr4_1:67166169-67166188 | Msa0566140:intron | 45.0% | |
| CCTAAGAAATCCAAAGCCGT+TGG | + | chr4_1:67166182-67166201 | None:intergenic | 45.0% | |
| !! | CCAACGGCTTTGGATTTCTT+AGG | - | chr4_1:67166179-67166198 | Msa0566140:intron | 45.0% |
| !! | GGCTTTGGATTTCTTAGGGA+TGG | - | chr4_1:67166184-67166203 | Msa0566140:intron | 45.0% |
| GAACCAAAAGAGAGGACAGT+GGG | + | chr4_1:67167028-67167047 | None:intergenic | 45.0% | |
| AGAACCAAAAGAGAGGACAG+TGG | + | chr4_1:67167029-67167048 | None:intergenic | 45.0% | |
| AGCACTGTTGCAATGCAAAC+GGG | + | chr4_1:67167058-67167077 | None:intergenic | 45.0% | |
| CAGCACTGTTGCAATGCAAA+CGG | + | chr4_1:67167059-67167078 | None:intergenic | 45.0% | |
| GCTCCAAAATAGCCATCAGT+TGG | + | chr4_1:67167098-67167117 | None:intergenic | 45.0% | |
| TTGCAAATGAACAGCACCAG+GGG | + | chr4_1:67167340-67167359 | None:intergenic | 45.0% | |
| ACAATTAGGGTACGAGCTTC+AGG | + | chr4_1:67167375-67167394 | None:intergenic | 45.0% | |
| CAAGATCATTGACACTCCGA+TGG | + | chr4_1:67167460-67167479 | None:intergenic | 45.0% | |
| TTCGAGAAAGGATAGTGCAG+GGG | + | chr4_1:67167528-67167547 | None:intergenic | 45.0% | |
| CTTCGAGAAAGGATAGTGCA+GGG | + | chr4_1:67167529-67167548 | None:intergenic | 45.0% | |
| ACTAGAACAGAGACAGGAGA+AGG | + | chr4_1:67167585-67167604 | None:intergenic | 45.0% | |
| GTTTCCCAGTATGGAGTTTC+GGG | - | chr4_1:67167628-67167647 | Msa0566140:CDS | 45.0% | |
| TCCCATGCTTATTGGACATC+AGG | + | chr4_1:67167692-67167711 | None:intergenic | 45.0% | |
| !!! | GCTTGCCTGTTTTTGAGAAC+CGG | - | chr4_1:67167800-67167819 | Msa0566140:CDS | 45.0% |
| !!! | CTTGCCTGTTTTTGAGAACC+GGG | - | chr4_1:67167801-67167820 | Msa0566140:CDS | 45.0% |
| !!! | TTGCCTGTTTTTGAGAACCG+GGG | - | chr4_1:67167802-67167821 | Msa0566140:CDS | 45.0% |
| AGTAACCACTATAACAGCCC+CGG | + | chr4_1:67167822-67167841 | None:intergenic | 45.0% | |
| GCTGTAGAGATACTCAGACT+GGG | + | chr4_1:67167886-67167905 | None:intergenic | 45.0% | |
| AGCTGTAGAGATACTCAGAC+TGG | + | chr4_1:67167887-67167906 | None:intergenic | 45.0% | |
| ! | TTCTAGTTAGGGTAGGCCTA+TGG | - | chr4_1:67168144-67168163 | Msa0566140:intron | 45.0% |
| CCAGGTTTCAGTTCAATTGC+AGG | + | chr4_1:67168420-67168439 | None:intergenic | 45.0% | |
| CCTGCAATTGAACTGAAACC+TGG | - | chr4_1:67168417-67168436 | Msa0566140:CDS | 45.0% | |
| TCTCATCAACAGGTCCTAGA+AGG | + | chr4_1:67168449-67168468 | None:intergenic | 45.0% | |
| CAGGTTTCTCGTACATCCAT+GGG | + | chr4_1:67169120-67169139 | None:intergenic | 45.0% | |
| TCTTTACTCTTCTGCAGCAC+TGG | + | chr4_1:67169294-67169313 | None:intergenic | 45.0% | |
| ! | AACTGCTTAAAGAGTGCACC+AGG | + | chr4_1:67169727-67169746 | None:intergenic | 45.0% |
| !!! | TTTAATTATTTATCTTTTAT+TGG | - | chr4_1:67164971-67164990 | Msa0566140:intron | 5.0% |
| !! | AAATATTATTTAGTATAAAT+AGG | - | chr4_1:67166935-67166954 | Msa0566140:intron | 5.0% |
| ATCGGAGATCGCAGTCGAAA+GGG | + | chr4_1:67162847-67162866 | None:intergenic | 50.0% | |
| !! | GGTTACTTTGAGGCCATCGA+CGG | + | chr4_1:67162945-67162964 | None:intergenic | 50.0% |
| TGACAAGCCTCCTCCTCATT+TGG | - | chr4_1:67163231-67163250 | Msa0566140:intron | 50.0% | |
| GACAAGCCTCCTCCTCATTT+GGG | - | chr4_1:67163232-67163251 | Msa0566140:intron | 50.0% | |
| CTAGAACCCAAATGAGGAGG+AGG | + | chr4_1:67163241-67163260 | None:intergenic | 50.0% | |
| ! | CACGTTAGAATCGGTTTCGG+AGG | - | chr4_1:67163484-67163503 | Msa0566140:intron | 50.0% |
| !! | GGCTTTGAAGTCCCCACTTA+TGG | - | chr4_1:67163924-67163943 | Msa0566140:CDS | 50.0% |
| TGGTTTAGGAGAGCTTCCTC+AGG | - | chr4_1:67164859-67164878 | Msa0566140:intron | 50.0% | |
| GATGTAGACAGGGATACCTG+AGG | + | chr4_1:67164878-67164897 | None:intergenic | 50.0% | |
| !! | GAGATAGAGCGGACGGATTA+TGG | + | chr4_1:67164908-67164927 | None:intergenic | 50.0% |
| TCAACAGGAGATAGAGCGGA+CGG | + | chr4_1:67164915-67164934 | None:intergenic | 50.0% | |
| GTTATTGGCGTCACGTCTGA+AGG | - | chr4_1:67165631-67165650 | Msa0566140:intron | 50.0% | |
| TATTGGCGTCACGTCTGAAG+GGG | - | chr4_1:67165633-67165652 | Msa0566140:intron | 50.0% | |
| !! | ACAGGTGAGGAAGGTTGGTA+AGG | - | chr4_1:67165964-67165983 | Msa0566140:intron | 50.0% |
| !! | GGAAGGTTGGTAAGGTTGCA+AGG | - | chr4_1:67165972-67165991 | Msa0566140:intron | 50.0% |
| !! | GAGTCATTGGTGTTGGGGAT+CGG | + | chr4_1:67166019-67166038 | None:intergenic | 50.0% |
| CGATTGGGAGTCATTGGTGT+TGG | + | chr4_1:67166026-67166045 | None:intergenic | 50.0% | |
| !! | TTGCACCGATTGGGAGTCAT+TGG | + | chr4_1:67166032-67166051 | None:intergenic | 50.0% |
| !!! | TTCGGCCCAGTTGCTTTTGT+GGG | + | chr4_1:67166063-67166082 | None:intergenic | 50.0% |
| !!! | TTTCGGCCCAGTTGCTTTTG+TGG | + | chr4_1:67166064-67166083 | None:intergenic | 50.0% |
| ! | CACTCCTTGTCGGCTGTTAT+GGG | + | chr4_1:67166243-67166262 | None:intergenic | 50.0% |
| ! | TCACTCCTTGTCGGCTGTTA+TGG | + | chr4_1:67166244-67166263 | None:intergenic | 50.0% |
| !! | GGGAGTATCTCACTCCTTGT+CGG | + | chr4_1:67166253-67166272 | None:intergenic | 50.0% |
| GGGAGAGGTAATGAGGTTTG+TGG | + | chr4_1:67167305-67167324 | None:intergenic | 50.0% | |
| TCGAGAAAGGATAGTGCAGG+GGG | + | chr4_1:67167527-67167546 | None:intergenic | 50.0% | |
| CCTTCGAGAAAGGATAGTGC+AGG | + | chr4_1:67167530-67167549 | None:intergenic | 50.0% | |
| CCTGCACTATCCTTTCTCGA+AGG | - | chr4_1:67167527-67167546 | Msa0566140:intron | 50.0% | |
| GGCCTTACATCCTTCGAGAA+AGG | + | chr4_1:67167540-67167559 | None:intergenic | 50.0% | |
| ACAGGCCATGTTTCCCAGTA+TGG | - | chr4_1:67167619-67167638 | Msa0566140:CDS | 50.0% | |
| GGGGCTGTTATAGTGGTTAC+TGG | - | chr4_1:67167821-67167840 | Msa0566140:CDS | 50.0% | |
| GGTCCTAGAAGGTCAATTCC+AGG | + | chr4_1:67168438-67168457 | None:intergenic | 50.0% | |
| ! | TCTAGGGTGGGTTCATTGAC+TGG | + | chr4_1:67168501-67168520 | None:intergenic | 50.0% |
| TTCCTGACACACCAGCTGTA+TGG | - | chr4_1:67168876-67168895 | Msa0566140:intron | 50.0% | |
| CCAGGTTTCTCGTACATCCA+TGG | + | chr4_1:67169121-67169140 | None:intergenic | 50.0% | |
| CCATGGATGTACGAGAAACC+TGG | - | chr4_1:67169118-67169137 | Msa0566140:intron | 50.0% | |
| GATGTACGAGAAACCTGGTC+TGG | - | chr4_1:67169123-67169142 | Msa0566140:intron | 50.0% | |
| !! | ACAGGTTCTAGACCTCACTG+TGG | - | chr4_1:67169256-67169275 | Msa0566140:intron | 50.0% |
| ! | TTACTCTTCTGCAGCACTGG+CGG | + | chr4_1:67169291-67169310 | None:intergenic | 50.0% |
| ATTACGCACAAGCGAGCATC+TGG | + | chr4_1:67169491-67169510 | None:intergenic | 50.0% | |
| ! | GTCTTGCTAACTTGTGCTCC+TGG | - | chr4_1:67169706-67169725 | Msa0566140:five_prime_UTR | 50.0% |
| CGCAGTCGAAAGGGGGTTTA+GGG | + | chr4_1:67162838-67162857 | None:intergenic | 55.0% | |
| TCGCAGTCGAAAGGGGGTTT+AGG | + | chr4_1:67162839-67162858 | None:intergenic | 55.0% | |
| TCGGAGATCGCAGTCGAAAG+GGG | + | chr4_1:67162846-67162865 | None:intergenic | 55.0% | |
| GATCGGAGATCGCAGTCGAA+AGG | + | chr4_1:67162848-67162867 | None:intergenic | 55.0% | |
| CTGCGATCTCCGATCGAAGA+TGG | - | chr4_1:67162853-67162872 | Msa0566140:three_prime_UTR | 55.0% | |
| AGTGGTCTTCTCTCCGTCGA+TGG | - | chr4_1:67162929-67162948 | Msa0566140:three_prime_UTR | 55.0% | |
| GCACGGCTTAGCGCTGTTTA+TGG | - | chr4_1:67165005-67165024 | Msa0566140:intron | 55.0% | |
| CGGCTTAGCGCTGTTTATGG+AGG | - | chr4_1:67165008-67165027 | Msa0566140:intron | 55.0% | |
| !! | CATTGGTGTTGGGGATCGGA+TGG | + | chr4_1:67166015-67166034 | None:intergenic | 55.0% |
| TCGACCCATAACAGCCGACA+AGG | - | chr4_1:67166236-67166255 | Msa0566140:intron | 55.0% | |
| ! | GCTCCCACTGTCCTCTCTTT+TGG | - | chr4_1:67167022-67167041 | Msa0566140:intron | 55.0% |
| CAGGAGAGGGAGAGGTAATG+AGG | + | chr4_1:67167312-67167331 | None:intergenic | 55.0% | |
| ACCAGGGGTTTGACAGGAGA+GGG | + | chr4_1:67167325-67167344 | None:intergenic | 55.0% | |
| AACAGCACCAGGGGTTTGAC+AGG | + | chr4_1:67167331-67167350 | None:intergenic | 55.0% | |
| AGAAAGGATAGTGCAGGGGG+GGG | + | chr4_1:67167524-67167543 | None:intergenic | 55.0% | |
| GAGAAAGGATAGTGCAGGGG+GGG | + | chr4_1:67167525-67167544 | None:intergenic | 55.0% | |
| CGAGAAAGGATAGTGCAGGG+GGG | + | chr4_1:67167526-67167545 | None:intergenic | 55.0% | |
| CAGCCCCGGTTCTCAAAAAC+AGG | + | chr4_1:67167808-67167827 | None:intergenic | 55.0% | |
| GAGAACCGGGGCTGTTATAG+TGG | - | chr4_1:67167814-67167833 | Msa0566140:CDS | 55.0% | |
| AGCCATACAGCTGGTGTGTC+AGG | + | chr4_1:67168881-67168900 | None:intergenic | 55.0% | |
| AGAAACCTGGTCTGGCCCTT+TGG | - | chr4_1:67169131-67169150 | Msa0566140:intron | 55.0% | |
| TCTGGCCCTTTGGCTAAGCA+TGG | - | chr4_1:67169141-67169160 | Msa0566140:intron | 55.0% | |
| CGGAGATCGCAGTCGAAAGG+GGG | + | chr4_1:67162845-67162864 | None:intergenic | 60.0% | |
| GGGGATCGGATGGCTCATGA+TGG | + | chr4_1:67166005-67166024 | None:intergenic | 60.0% | |
| GGGTTTGACAGGAGAGGGAG+AGG | + | chr4_1:67167320-67167339 | None:intergenic | 60.0% | |
| TCCCTCTCCTGTCAAACCCC+TGG | - | chr4_1:67167321-67167340 | Msa0566140:intron | 60.0% | |
| CACCAGGGGTTTGACAGGAG+AGG | + | chr4_1:67167326-67167345 | None:intergenic | 60.0% | |
| CTTAGCCAAAGGGCCAGACC+AGG | + | chr4_1:67169139-67169158 | None:intergenic | 60.0% | |
| ! | CGGCACTGAGATCCACAGTG+AGG | + | chr4_1:67169271-67169290 | None:intergenic | 60.0% |
| GCACAAGCGAGCATCTGGAG+GGG | + | chr4_1:67169486-67169505 | None:intergenic | 60.0% | |
| CGCACAAGCGAGCATCTGGA+GGG | + | chr4_1:67169487-67169506 | None:intergenic | 60.0% | |
| ACGCACAAGCGAGCATCTGG+AGG | + | chr4_1:67169488-67169507 | None:intergenic | 60.0% | |
| AAGGATAGTGCAGGGGGGGG+TGG | + | chr4_1:67167521-67167540 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 67162680 | 67169773 | 67162680 | ID=Msa0566140;Name=Msa0566140 |
| chr4_1 | mRNA | 67162680 | 67169773 | 67162680 | ID=Msa0566140-mRNA-1;Parent=Msa0566140;Name=Msa0566140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=192|1|1|1|1|1|13|463|444 |
| chr4_1 | exon | 67162680 | 67163193 | 67162680 | ID=Msa0566140-mRNA-1:exon:21963;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67163762 | 67163836 | 67163762 | ID=Msa0566140-mRNA-1:exon:21962;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67163914 | 67164124 | 67163914 | ID=Msa0566140-mRNA-1:exon:21961;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67166361 | 67166485 | 67166361 | ID=Msa0566140-mRNA-1:exon:21960;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67166745 | 67166846 | 67166745 | ID=Msa0566140-mRNA-1:exon:21959;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67167392 | 67167454 | 67167392 | ID=Msa0566140-mRNA-1:exon:21958;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67167573 | 67167653 | 67167573 | ID=Msa0566140-mRNA-1:exon:21957;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67167793 | 67167904 | 67167793 | ID=Msa0566140-mRNA-1:exon:21956;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67168386 | 67168558 | 67168386 | ID=Msa0566140-mRNA-1:exon:21955;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67168675 | 67168782 | 67168675 | ID=Msa0566140-mRNA-1:exon:21954;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67169162 | 67169245 | 67169162 | ID=Msa0566140-mRNA-1:exon:21953;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67169342 | 67169404 | 67169342 | ID=Msa0566140-mRNA-1:exon:21952;Parent=Msa0566140-mRNA-1 |
| chr4_1 | exon | 67169495 | 67169773 | 67169495 | ID=Msa0566140-mRNA-1:exon:21951;Parent=Msa0566140-mRNA-1 |
| chr4_1 | five_prime_UTR | 67169582 | 67169773 | 67169582 | ID=Msa0566140-mRNA-1:five_prime_utr;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67169495 | 67169581 | 67169495 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67169342 | 67169404 | 67169342 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67169162 | 67169245 | 67169162 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67168675 | 67168782 | 67168675 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67168386 | 67168558 | 67168386 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67167793 | 67167904 | 67167793 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67167573 | 67167653 | 67167573 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67167392 | 67167454 | 67167392 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67166745 | 67166846 | 67166745 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67166361 | 67166485 | 67166361 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67163914 | 67164124 | 67163914 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67163762 | 67163836 | 67163762 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | CDS | 67163143 | 67163193 | 67163143 | ID=Msa0566140-mRNA-1:cds;Parent=Msa0566140-mRNA-1 |
| chr4_1 | three_prime_UTR | 67162680 | 67163142 | 67162680 | ID=Msa0566140-mRNA-1:three_prime_utr;Parent=Msa0566140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
