AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1296960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296960 MtrunA17_Chr4g0053951 94.048 420 4 2 1 400 1 419 0.0 809
Msa1296960 MtrunA17_Chr5g0401371 79.827 347 50 1 74 400 68 414 0.0 571
Msa1296960 MtrunA17_Chr4g0053821 75.623 361 64 2 64 400 28 388 0.0 532
Msa1296960 MtrunA17_Chr1g0187371 28.746 327 166 11 109 389 6 311 1.71e-37 138
Msa1296960 MtrunA17_Chr4g0002001 27.950 322 164 9 119 389 2 306 8.25e-36 133
Msa1296960 MtrunA17_Chr8g0350311 30.671 313 160 12 121 395 139 432 4.85e-35 134
Msa1296960 MtrunA17_Chr2g0293491 30.392 306 169 9 118 392 1 293 2.17e-34 129
Msa1296960 MtrunA17_Chr8g0358921 28.616 318 176 9 119 399 45 348 7.14e-33 126
Msa1296960 MtrunA17_Chr4g0051261 29.836 305 170 9 119 392 2 293 1.29e-32 124
Msa1296960 MtrunA17_Chr2g0320011 29.180 305 167 10 120 390 87 376 1.68e-32 127
Msa1296960 MtrunA17_Chr3g0131861 29.766 299 169 10 119 387 95 382 1.74e-32 128
Msa1296960 MtrunA17_Chr7g0273601 29.766 299 169 9 119 387 105 392 1.75e-32 128
Msa1296960 MtrunA17_Chr2g0284091 28.571 308 165 11 120 390 39 328 2.36e-32 125
Msa1296960 MtrunA17_Chr8g0387401 27.451 306 169 9 124 392 55 344 3.01e-32 125
Msa1296960 MtrunA17_Chr2g0277011 30.033 303 155 12 127 391 96 379 8.03e-32 125
Msa1296960 MtrunA17_Chr7g0270371 29.412 306 167 10 120 391 74 364 9.45e-32 124
Msa1296960 MtrunA17_Chr1g0194201 29.412 306 167 10 120 391 74 364 4.32e-31 122
Msa1296960 MtrunA17_Chr1g0191221 30.100 299 168 10 119 387 120 407 5.37e-31 124
Msa1296960 MtrunA17_Chr4g0061141 31.126 302 159 13 119 386 103 389 1.24e-30 124
Msa1296960 MtrunA17_Chr1g0193081 29.316 307 166 11 120 391 74 364 5.08e-30 119
Msa1296960 MtrunA17_Chr7g0218071 30.435 299 168 10 119 387 118 406 1.00e-29 121
Msa1296960 MtrunA17_Chr6g0453711 29.373 303 169 13 119 389 108 397 1.72e-29 120
Msa1296960 MtrunA17_Chr2g0317501 28.094 299 174 11 119 387 132 419 2.50e-29 120
Msa1296960 MtrunA17_Chr4g0045841 27.124 306 169 9 124 392 58 346 4.75e-29 116
Msa1296960 MtrunA17_Chr7g0246591 26.923 338 189 12 96 391 109 430 6.27e-29 117
Msa1296960 MtrunA17_Chr5g0397261 26.885 305 172 9 124 392 44 333 1.56e-28 115
Msa1296960 MtrunA17_Chr2g0286421 29.097 299 171 11 119 387 100 387 2.16e-28 116
Msa1296960 MtrunA17_Chr4g0066691 27.759 299 175 10 119 387 102 389 2.21e-28 116
Msa1296960 MtrunA17_Chr8g0348481 25.902 305 175 8 124 392 40 329 2.77e-28 114
Msa1296960 MtrunA17_Chr8g0385971 28.094 299 174 9 119 387 88 375 3.15e-28 116
Msa1296960 MtrunA17_Chr2g0324461 28.859 298 169 10 121 387 141 426 6.08e-28 115
Msa1296960 MtrunA17_Chr6g0483151 28.571 294 159 11 127 387 20 295 7.15e-28 114
Msa1296960 MtrunA17_Chr7g0248461 27.333 300 177 10 124 392 41 330 9.94e-28 112
Msa1296960 MtrunA17_Chr5g0409421 26.115 314 181 11 119 399 2 297 1.12e-27 114
Msa1296960 MtrunA17_Chr4g0030231 27.000 300 178 9 124 392 43 332 1.58e-27 112
Msa1296960 MtrunA17_Chr4g0030151 28.000 300 175 10 124 392 42 331 2.46e-27 111
Msa1296960 MtrunA17_Chr4g0040141 28.428 299 173 11 119 387 127 414 2.93e-27 114
Msa1296960 MtrunA17_Chr1g0201571 31.416 226 120 7 119 313 124 345 3.92e-27 113
Msa1296960 MtrunA17_Chr5g0396361 27.759 299 175 12 119 387 138 425 9.57e-27 112
Msa1296960 MtrunA17_Chr3g0141871 28.904 301 166 12 121 386 32 319 4.21e-26 108
Msa1296960 MtrunA17_Chr5g0443351 28.616 318 177 12 114 393 15 320 5.33e-26 109
Msa1296960 MtrunA17_Chr8g0378831 28.667 300 168 12 121 386 32 319 6.20e-26 107
Msa1296960 MtrunA17_Chr6g0482681 29.338 317 178 12 113 393 81 387 7.18e-26 109
Msa1296960 MtrunA17_Chr3g0099951 27.759 299 161 13 127 389 20 299 1.20e-25 107
Msa1296960 MtrunA17_Chr8g0383451 32.618 233 117 9 127 326 4 229 2.71e-25 107
Msa1296960 MtrunA17_Chr8g0359091 28.840 319 177 12 113 393 18 324 3.86e-25 107
Msa1296960 MtrunA17_Chr4g0065851 27.356 329 192 13 101 393 6 323 4.23e-25 107
Msa1296960 MtrunA17_Chr8g0369451 24.503 302 170 9 121 386 4 283 5.23e-25 106
Msa1296960 MtrunA17_Chr3g0096631 28.797 316 179 12 114 393 18 323 6.03e-25 107
Msa1296960 MtrunA17_Chr8g0392811 26.498 317 187 12 113 393 109 415 9.49e-25 106
Msa1296960 MtrunA17_Chr2g0287271 27.052 329 193 13 101 393 6 323 2.20e-24 105
Msa1296960 MtrunA17_Chr3g0102571 34.054 185 112 5 203 386 191 366 3.18e-24 103
Msa1296960 MtrunA17_Chr3g0122781 28.311 219 134 6 187 389 514 725 1.94e-23 102
Msa1296960 MtrunA17_Chr3g0130781 28.086 324 174 13 114 386 13 328 3.70e-23 100
Msa1296960 MtrunA17_Chr7g0274941 25.000 308 154 10 114 386 9 274 5.30e-23 98.2
Msa1296960 MtrunA17_Chr8g0339221 25.926 297 175 10 121 387 4 285 5.72e-23 100
Msa1296960 MtrunA17_Chr4g0057791 32.474 194 110 6 203 386 329 511 1.21e-22 99.8
Msa1296960 MtrunA17_Chr8g0377071 32.000 200 109 8 203 389 494 679 1.26e-22 100
Msa1296960 MtrunA17_Chr3g0093391 26.837 313 173 12 119 386 21 322 1.79e-22 99.4
Msa1296960 MtrunA17_Chr3g0127571 25.246 305 159 8 121 392 138 406 4.03e-22 98.6
Msa1296960 MtrunA17_Chr7g0256001 24.331 411 211 13 24 386 45 403 4.73e-22 98.2
Msa1296960 MtrunA17_Chr3g0093571 26.562 320 165 12 119 386 23 324 5.69e-22 97.8
Msa1296960 MtrunA17_Chr4g0059951 24.599 374 186 13 47 386 20 331 9.44e-21 94.4
Msa1296960 MtrunA17_Chr7g0276111 24.205 409 186 17 46 386 54 406 1.83e-20 93.6
Msa1296960 MtrunA17_Chr3g0102601 32.065 184 101 5 203 386 45 204 3.52e-20 89.4
Msa1296960 MtrunA17_Chr7g0257751 25.987 304 142 9 121 386 58 316 1.02e-19 90.9
Msa1296960 MtrunA17_Chr1g0190131 24.658 292 158 10 121 386 9 264 3.19e-19 87.0
Msa1296960 MtrunA17_Chr4g0030241 35.135 111 70 2 203 313 12 120 9.07e-19 83.6
Msa1296960 MtrunA17_Chr2g0314321 26.506 332 181 13 115 393 19 340 2.28e-18 87.0
Msa1296960 MtrunA17_Chr4g0074811 25.667 300 148 10 121 386 91 349 3.95e-18 86.3
Msa1296960 MtrunA17_Chr4g0074791 25.203 369 184 14 51 386 45 354 1.23e-17 84.7
Msa1296960 MtrunA17_Chr1g0157131 26.102 295 153 10 121 386 74 332 2.78e-17 83.6
Msa1296960 MtrunA17_Chr7g0267771 23.986 296 156 8 121 385 88 345 3.66e-17 83.2
Msa1296960 MtrunA17_Chr1g0176751 25.424 295 155 9 121 386 124 382 5.23e-17 82.8
Msa1296960 MtrunA17_Chr3g0116701 24.478 335 175 16 121 386 94 419 1.01e-16 81.6
Msa1296960 MtrunA17_Chr4g0008561 24.749 299 157 9 120 388 18 278 1.43e-16 81.6
Msa1296960 MtrunA17_Chr8g0385341 28.019 207 112 6 121 295 30 231 1.45e-16 81.3
Msa1296960 MtrunA17_Chr1g0170281 23.214 336 178 10 83 386 89 376 4.23e-16 80.1
Msa1296960 MtrunA17_Chr3g0130151 22.185 302 161 9 127 397 250 508 6.08e-16 79.7
Msa1296960 MtrunA17_Chr7g0242561 23.432 303 157 9 118 386 53 314 8.52e-16 79.0
Msa1296960 MtrunA17_Chr4g0001331 27.404 208 114 8 119 294 18 220 3.28e-15 77.0
Msa1296960 MtrunA17_Chr7g0267751 24.068 295 159 9 121 386 135 393 3.74e-15 77.4
Msa1296960 MtrunA17_Chr2g0286501 28.936 235 124 9 108 306 30 257 4.32e-15 77.4
Msa1296960 MtrunA17_Chr8g0351491 26.341 205 115 7 119 294 14 211 7.41e-15 74.3
Msa1296960 MtrunA17_Chr5g0432471 26.961 204 116 9 121 294 12 212 1.43e-14 75.1
Msa1296960 MtrunA17_Chr1g0205421 26.442 208 114 9 121 295 12 213 2.44e-14 74.3
Msa1296960 MtrunA17_Chr4g0063881 28.293 205 111 8 121 294 11 210 6.28e-14 73.2
Msa1296960 MtrunA17_Chr1g0190831 23.333 300 159 8 119 388 2 260 7.02e-14 73.2
Msa1296960 MtrunA17_Chr4g0013131 27.536 207 111 9 121 294 12 212 1.25e-13 72.4
Msa1296960 MtrunA17_Chr3g0140631 25.000 220 127 8 119 307 35 247 1.62e-13 70.9
Msa1296960 MtrunA17_Chr8g0346071 26.699 206 113 8 121 294 17 216 4.14e-13 70.5
Msa1296960 MtrunA17_Chr8g0390341 32.836 134 83 3 254 387 288 414 4.39e-13 70.5
Msa1296960 MtrunA17_Chr8g0353621 24.878 205 118 7 119 294 8 205 4.52e-13 68.9
Msa1296960 MtrunA17_Chr8g0346081 25.854 205 116 7 121 294 17 216 5.20e-13 70.1
Msa1296960 MtrunA17_Chr3g0107011 25.439 228 128 11 121 316 14 231 6.15e-13 70.1
Msa1296960 MtrunA17_Chr8g0345801 25.110 227 132 8 120 316 14 232 6.49e-13 68.6
Msa1296960 MtrunA17_Chr5g0441011 26.923 208 112 9 121 294 13 214 7.23e-13 69.7
Msa1296960 MtrunA17_Chr1g0150321 27.830 212 114 8 121 300 13 217 1.10e-12 69.3
Msa1296960 MtrunA17_Chr6g0486031 32.090 134 84 3 254 387 275 401 1.38e-12 68.9
Msa1296960 MtrunA17_Chr5g0419441 21.534 339 191 12 77 386 201 493 1.53e-12 69.3
Msa1296960 MtrunA17_Chr2g0284011 27.317 205 114 9 121 294 12 212 1.55e-12 68.9
Msa1296960 MtrunA17_Chr3g0139371 22.024 336 181 14 121 386 74 398 2.19e-12 68.2
Msa1296960 MtrunA17_Chr1g0170551 28.571 217 115 9 116 301 2 209 2.55e-12 68.9
Msa1296960 MtrunA17_Chr2g0333821 26.442 208 116 8 119 294 12 214 2.68e-12 68.2
Msa1296960 MtrunA17_Chr7g0244521 25.877 228 125 11 121 315 12 228 2.83e-12 68.2
Msa1296960 MtrunA17_Chr2g0284031 26.941 219 118 10 109 294 22 231 2.99e-12 68.2
Msa1296960 MtrunA17_Chr3g0132591 23.183 289 163 8 119 386 110 360 3.12e-12 67.8
Msa1296960 MtrunA17_Chr7g0272841 24.444 225 123 10 127 313 74 289 1.03e-11 66.6
Msa1296960 MtrunA17_Chr3g0114511 23.415 205 122 7 121 295 32 231 1.72e-11 65.5
Msa1296960 MtrunA17_Chr3g0125381 28.750 160 84 6 174 307 10 165 2.11e-11 63.2
Msa1296960 MtrunA17_Chr2g0304111 25.854 205 118 9 121 294 23 224 2.47e-11 65.1
Msa1296960 MtrunA17_Chr1g0166101 25.604 207 116 8 121 294 24 225 3.03e-11 64.7
Msa1296960 MtrunA17_Chr5g0402601 25.177 282 145 15 51 294 326 579 4.05e-11 64.7
Msa1296960 MtrunA17_Chr1g0210061 35.922 103 61 4 203 304 726 824 4.08e-11 65.1
Msa1296960 MtrunA17_Chr5g0432491 25.962 208 114 9 121 294 23 224 5.37e-11 63.9
Msa1296960 MtrunA17_Chr4g0074111 24.510 204 121 8 121 294 18 218 6.97e-11 63.5
Msa1296960 MtrunA17_Chr8g0379091 26.570 207 113 9 121 294 26 226 7.27e-11 63.9
Msa1296960 MtrunA17_Chr5g0444181 24.737 190 91 6 95 248 74 247 7.64e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296960 AT2G23070.1 85.756 344 29 1 74 397 85 428 0.0 578
Msa1296960 AT5G67380.1 79.042 334 50 1 87 400 76 409 0.0 523
Msa1296960 AT3G50000.1 79.518 332 48 1 89 400 72 403 0.0 522
Msa1296960 AT2G23080.1 77.039 331 56 1 89 399 2 332 7.25e-178 498
Msa1296960 AT5G67380.2 71.257 334 43 2 87 400 76 376 2.56e-174 491
Msa1296960 AT2G23080.2 77.778 297 46 1 89 365 2 298 8.51e-157 444
Msa1296960 AT2G38620.2 29.268 328 152 10 119 389 2 306 4.04e-37 137
Msa1296960 AT3G54180.1 28.834 326 154 10 119 389 2 304 5.92e-36 134
Msa1296960 AT1G20930.1 29.618 314 160 12 119 389 14 309 6.17e-36 134
Msa1296960 AT3G48750.1 30.464 302 166 10 119 389 2 290 1.33e-35 132
Msa1296960 AT1G76540.1 29.154 319 155 12 119 389 12 307 8.43e-35 131
Msa1296960 AT2G38620.4 30.216 278 152 8 119 389 2 244 1.57e-34 128
Msa1296960 AT4G00720.1 29.395 347 187 12 96 399 106 437 5.10e-34 132
Msa1296960 AT3G61160.1 29.126 309 170 10 121 395 102 395 3.67e-33 129
Msa1296960 AT3G61160.4 29.126 309 170 10 121 395 102 395 4.55e-33 129
Msa1296960 AT2G30980.1 30.164 305 164 10 120 390 71 360 5.94e-33 128
Msa1296960 AT3G61160.2 29.126 309 170 10 121 395 109 402 6.11e-33 128
Msa1296960 AT1G74330.3 29.610 385 191 17 67 387 40 408 7.49e-33 130
Msa1296960 AT5G14640.1 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa1296960 AT5G14640.2 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa1296960 AT1G06390.2 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa1296960 AT1G06390.1 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa1296960 AT1G74330.1 29.610 385 191 17 67 387 40 408 1.11e-32 130
Msa1296960 AT1G74330.2 29.610 385 191 17 67 387 40 408 1.42e-32 130
Msa1296960 AT1G73690.1 28.283 297 156 10 127 387 17 292 8.31e-32 124
Msa1296960 AT5G50860.2 29.293 297 169 10 121 387 114 399 2.98e-31 124
Msa1296960 AT4G18710.1 28.758 306 167 11 120 390 39 328 3.12e-31 122
Msa1296960 AT5G50860.1 29.293 297 169 10 121 387 114 399 3.26e-31 125
Msa1296960 AT3G59790.1 29.545 308 159 11 124 392 63 351 6.07e-31 122
Msa1296960 AT5G26751.1 28.758 306 169 10 120 391 68 358 5.78e-30 120
Msa1296960 AT4G10010.2 27.759 299 175 10 119 387 154 441 9.15e-30 121
Msa1296960 AT1G18040.1 28.866 291 162 10 127 387 18 293 1.07e-29 119
Msa1296960 AT1G18670.2 30.263 304 164 12 119 387 129 419 1.12e-29 121
Msa1296960 AT3G05840.2 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa1296960 AT3G05840.1 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa1296960 AT1G18670.3 29.934 304 165 12 119 387 129 419 1.44e-29 121
Msa1296960 AT1G18670.1 30.263 304 164 12 119 387 129 419 1.83e-29 120
Msa1296960 AT1G54610.1 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1296960 AT1G54610.3 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1296960 AT1G54610.2 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1296960 AT1G53050.2 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa1296960 AT1G53050.1 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa1296960 AT1G09840.3 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.7 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.10 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.6 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.4 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.1 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.9 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.5 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.8 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT1G09840.2 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1296960 AT5G39420.1 27.852 298 174 11 119 386 103 389 1.15e-28 118
Msa1296960 AT1G57870.3 28.053 303 161 12 127 391 88 371 2.45e-28 115
Msa1296960 AT1G57870.1 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1296960 AT1G57870.4 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1296960 AT1G57870.2 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1296960 AT3G01085.1 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa1296960 AT3G01085.2 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa1296960 AT3G01085.3 29.801 302 166 11 119 387 113 401 2.78e-28 117
Msa1296960 AT4G01370.1 26.667 300 179 10 124 392 46 335 1.13e-27 113
Msa1296960 AT4G19110.1 26.000 300 172 11 119 386 2 283 1.21e-27 114
Msa1296960 AT4G19110.2 26.000 300 172 11 119 386 2 283 1.36e-27 114
Msa1296960 AT1G09840.11 32.143 196 109 6 204 391 66 245 1.67e-27 110
Msa1296960 AT2G38620.3 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa1296960 AT2G38620.1 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa1296960 AT3G61160.5 28.421 285 155 10 127 377 108 377 3.19e-27 112
Msa1296960 AT5G45430.2 27.000 300 165 11 121 386 4 283 3.81e-27 113
Msa1296960 AT2G43790.1 26.797 306 170 11 124 392 66 354 4.04e-27 111
Msa1296960 AT5G45430.1 27.000 300 165 11 121 386 4 283 4.51e-27 112
Msa1296960 AT4G10010.1 29.249 253 143 9 160 387 20 261 5.36e-27 112
Msa1296960 AT1G10210.2 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1296960 AT1G10210.3 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1296960 AT1G10210.1 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1296960 AT4G22940.1 27.832 309 175 11 113 386 93 388 7.58e-27 112
Msa1296960 AT4G13020.1 26.710 307 178 9 121 393 4 297 7.77e-27 111
Msa1296960 AT4G13020.6 26.871 294 175 8 121 387 4 284 7.88e-27 110
Msa1296960 AT4G11330.1 27.333 300 177 10 124 392 46 335 8.13e-27 110
Msa1296960 AT1G66750.1 27.852 298 172 9 119 387 11 294 8.55e-27 110
Msa1296960 AT4G13020.4 26.710 307 178 9 121 393 4 297 8.59e-27 110
Msa1296960 AT4G13020.2 26.710 307 178 9 121 393 12 305 1.06e-26 111
Msa1296960 AT4G13020.3 26.710 307 178 9 121 393 12 305 1.07e-26 111
Msa1296960 AT1G01560.2 26.936 297 176 10 124 389 43 329 1.09e-26 110
Msa1296960 AT4G22940.2 27.832 309 175 11 113 386 93 388 1.12e-26 112
Msa1296960 AT4G13020.7 26.871 294 175 8 121 387 4 284 1.42e-26 110
Msa1296960 AT1G07880.2 26.230 305 174 9 124 392 36 325 1.61e-26 109
Msa1296960 AT2G46070.1 27.333 300 177 10 124 392 44 333 2.10e-26 109
Msa1296960 AT1G71530.2 26.421 299 179 9 119 387 145 432 2.39e-26 110
Msa1296960 AT2G46070.3 27.333 300 177 10 124 392 78 367 2.43e-26 109
Msa1296960 AT1G03740.2 27.362 307 178 12 113 386 203 497 4.00e-26 111
Msa1296960 AT1G03740.1 27.362 307 178 12 113 386 203 497 4.49e-26 110
Msa1296960 AT4G13020.5 25.633 316 179 9 121 393 4 306 1.01e-25 108
Msa1296960 AT1G71530.1 26.421 299 179 9 119 387 145 432 1.11e-25 109
Msa1296960 AT1G71530.3 26.621 293 174 9 119 381 145 426 1.56e-25 107
Msa1296960 AT5G44290.7 27.027 296 175 9 121 386 137 421 1.57e-25 108
Msa1296960 AT2G01450.3 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1296960 AT2G01450.1 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1296960 AT2G01450.2 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1296960 AT2G01450.4 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1296960 AT4G13020.8 25.743 303 176 8 121 387 4 293 1.75e-25 107
Msa1296960 AT5G44290.6 27.027 296 175 9 121 386 137 421 1.80e-25 108
Msa1296960 AT5G44290.2 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1296960 AT5G44290.5 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1296960 AT5G44290.4 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1296960 AT5G44290.1 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1296960 AT5G44290.3 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1296960 AT2G18170.1 26.948 308 177 12 121 391 32 328 3.39e-25 105
Msa1296960 AT1G67580.1 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa1296960 AT1G67580.2 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa1296960 AT1G59580.2 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa1296960 AT1G59580.1 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa1296960 AT2G42880.2 28.254 315 180 12 115 393 19 323 7.79e-25 106
Msa1296960 AT1G33770.1 29.778 225 125 7 119 313 139 360 7.95e-25 107
Msa1296960 AT2G42880.1 28.254 315 180 12 115 393 19 323 1.04e-24 106
Msa1296960 AT3G45640.1 27.491 291 170 8 127 386 44 324 2.03e-24 103
Msa1296960 AT1G09600.1 27.852 298 174 11 119 386 161 447 2.39e-24 105
Msa1296960 AT5G64960.1 26.100 341 189 13 91 386 3 325 3.61e-24 104
Msa1296960 AT1G73670.1 26.518 313 184 12 113 389 82 384 4.25e-24 104
Msa1296960 AT3G14720.1 28.707 317 180 12 113 393 17 323 4.81e-24 104
Msa1296960 AT4G36450.1 26.250 320 173 12 121 395 32 333 5.39e-24 102
Msa1296960 AT5G10270.1 25.740 338 188 12 94 386 6 325 6.76e-24 103
Msa1296960 AT3G61160.3 29.817 218 118 7 127 313 108 321 8.26e-24 101
Msa1296960 AT3G14720.2 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa1296960 AT3G14720.3 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa1296960 AT3G61160.6 29.817 218 118 7 127 313 115 328 1.44e-23 101
Msa1296960 AT3G05050.3 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1296960 AT3G05050.2 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1296960 AT3G05050.1 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1296960 AT4G19110.3 25.630 238 138 7 174 386 4 227 4.54e-23 100
Msa1296960 AT5G19010.1 26.498 317 187 12 113 393 17 323 9.04e-23 100
Msa1296960 AT1G71530.4 29.187 209 115 6 119 297 145 350 1.70e-22 98.2
Msa1296960 AT1G53510.1 26.582 316 188 10 113 393 17 323 2.91e-22 99.4
Msa1296960 AT3G18040.5 27.500 320 180 13 113 393 10 316 5.47e-22 98.2
Msa1296960 AT5G63370.2 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa1296960 AT5G63370.3 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa1296960 AT3G18040.4 27.500 320 180 13 113 393 124 430 5.89e-22 98.6
Msa1296960 AT3G18040.1 27.500 320 180 13 113 393 15 321 6.08e-22 98.2
Msa1296960 AT1G01560.3 26.224 286 170 10 124 378 43 318 6.23e-22 96.3
Msa1296960 AT3G18040.3 27.500 320 180 13 113 393 124 430 7.67e-22 98.2
Msa1296960 AT5G63370.7 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1296960 AT5G63370.8 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1296960 AT5G63370.4 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1296960 AT5G63370.6 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1296960 AT5G63370.1 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1296960 AT2G46070.2 26.950 282 165 10 124 374 44 315 9.42e-22 95.5
Msa1296960 AT4G18710.2 28.889 225 125 7 120 313 33 253 1.01e-21 94.4
Msa1296960 AT3G53570.1 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1296960 AT3G53570.4 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1296960 AT3G53570.2 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1296960 AT3G53570.3 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa1296960 AT3G53570.5 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa1296960 AT1G57700.1 28.444 225 128 7 119 313 144 365 9.15e-21 95.1
Msa1296960 AT2G41140.1 24.129 373 190 15 56 386 64 385 9.72e-21 94.7
Msa1296960 AT5G63610.1 28.261 322 174 16 114 386 20 333 1.01e-20 94.4
Msa1296960 AT5G12480.1 24.731 372 180 14 53 386 8 317 2.38e-20 93.6
Msa1296960 AT3G57530.2 25.234 321 159 11 118 398 60 339 2.84e-20 92.4
Msa1296960 AT1G07880.1 28.111 217 123 7 124 310 36 249 6.02e-20 89.0
Msa1296960 AT2G41860.1 25.472 318 156 11 121 398 54 330 7.13e-20 92.0
Msa1296960 AT5G64960.2 29.057 265 137 11 162 386 19 272 7.15e-20 91.7
Msa1296960 AT2G41860.2 25.472 318 156 11 121 398 54 330 1.14e-19 91.3
Msa1296960 AT3G57530.1 25.472 318 156 11 121 398 63 339 1.27e-19 91.3
Msa1296960 AT5G24430.1 24.756 307 152 10 118 386 140 405 2.32e-19 90.5
Msa1296960 AT1G01560.4 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa1296960 AT1G01560.1 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa1296960 AT3G19100.1 25.402 311 159 11 118 393 141 413 5.16e-19 89.4
Msa1296960 AT1G18890.1 25.743 303 150 10 118 386 60 321 5.65e-19 89.4
Msa1296960 AT2G46700.1 25.418 299 154 10 121 386 143 405 5.99e-19 89.4
Msa1296960 AT5G63370.9 28.017 232 124 9 119 313 161 386 6.63e-19 88.2
Msa1296960 AT2G38910.1 25.581 301 151 10 118 385 131 391 6.79e-19 89.0
Msa1296960 AT5G63370.5 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa1296960 AT5G63370.10 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa1296960 AT5G12180.1 25.246 305 143 10 121 386 73 331 7.61e-19 89.0
Msa1296960 AT3G49370.1 24.671 304 156 10 118 386 139 404 2.34e-18 87.4
Msa1296960 AT1G76040.3 25.407 307 148 11 121 390 112 374 2.88e-18 87.0
Msa1296960 AT1G76040.2 25.407 307 148 11 121 390 112 374 3.52e-18 87.0
Msa1296960 AT5G19450.2 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa1296960 AT5G19450.1 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa1296960 AT2G37840.1 25.641 312 158 13 120 398 11 281 3.84e-17 84.0
Msa1296960 AT3G53930.1 25.402 311 160 12 120 398 19 289 6.19e-17 83.2
Msa1296960 AT3G53930.2 25.402 311 160 12 120 398 19 289 7.03e-17 83.2
Msa1296960 AT3G18040.2 31.000 200 117 8 203 393 46 233 1.18e-16 81.6
Msa1296960 AT2G46700.2 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa1296960 AT2G46700.3 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa1296960 AT3G51850.3 23.432 303 157 9 118 386 51 312 2.52e-16 80.5
Msa1296960 AT5G04870.1 24.150 294 158 8 121 385 150 407 2.96e-16 81.3
Msa1296960 AT5G57630.2 25.616 203 117 6 121 294 12 209 3.91e-16 80.1
Msa1296960 AT5G57630.1 25.616 203 117 6 121 294 12 209 4.21e-16 80.1
Msa1296960 AT5G39440.1 26.570 207 112 7 120 294 18 216 5.04e-16 80.1
Msa1296960 AT3G50530.2 22.477 436 211 16 29 386 55 441 5.26e-16 80.5
Msa1296960 AT1G53570.1 22.000 300 163 7 127 395 220 479 7.40e-16 79.7
Msa1296960 AT1G53570.4 22.000 300 163 7 127 395 220 479 7.66e-16 79.7
Msa1296960 AT1G53570.2 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa1296960 AT1G53570.3 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa1296960 AT2G25090.1 26.606 218 114 10 119 295 13 225 9.53e-16 79.3
Msa1296960 AT1G53570.6 22.000 300 163 7 127 395 220 479 9.53e-16 79.3
Msa1296960 AT1G53570.7 22.000 300 163 7 127 395 220 479 1.01e-15 79.3
Msa1296960 AT1G54960.1 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa1296960 AT1G54960.2 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa1296960 AT2G45490.2 26.667 210 117 9 114 294 16 217 1.50e-15 76.3
Msa1296960 AT3G51850.1 23.220 323 165 10 118 398 51 332 1.71e-15 78.6
Msa1296960 AT1G08650.1 23.490 298 157 10 121 386 15 273 1.73e-15 76.6
Msa1296960 AT3G51850.2 23.220 323 165 10 118 398 51 332 1.82e-15 78.6
Msa1296960 AT3G04530.1 22.152 316 177 9 111 395 1 278 2.09e-15 76.3
Msa1296960 AT4G04700.1 23.750 320 164 10 121 398 28 309 2.10e-15 78.2
Msa1296960 AT4G32660.1 24.096 332 180 11 121 386 71 396 3.14e-15 77.4
Msa1296960 AT4G32660.3 24.096 332 180 11 121 386 63 388 3.55e-15 77.0
Msa1296960 AT2G45490.1 26.667 210 117 9 114 294 16 217 3.58e-15 75.9
Msa1296960 AT1G12680.1 24.055 291 158 10 119 386 105 355 4.88e-15 77.0
Msa1296960 AT1G50240.3 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa1296960 AT1G50240.2 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa1296960 AT5G12480.2 28.796 191 98 6 198 386 69 223 1.26e-14 75.5
Msa1296960 AT3G01090.3 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa1296960 AT3G01090.1 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa1296960 AT3G01090.2 26.087 207 114 6 120 294 41 240 1.53e-14 75.9
Msa1296960 AT5G21326.1 27.885 208 110 9 121 294 13 214 3.62e-14 74.3
Msa1296960 AT5G23580.1 23.125 320 169 11 101 386 4 280 5.97e-14 73.6
Msa1296960 AT3G06030.1 22.517 302 155 10 127 390 74 334 6.36e-14 73.9
Msa1296960 AT1G09000.2 22.517 302 145 11 127 385 75 330 6.73e-14 73.9
Msa1296960 AT1G08650.2 23.411 299 156 11 121 387 15 272 6.96e-14 72.0
Msa1296960 AT5G25110.1 29.327 208 106 10 121 294 43 243 6.99e-14 73.6
Msa1296960 AT1G01140.2 27.273 209 112 9 120 294 18 220 7.10e-14 73.6
Msa1296960 AT1G01140.1 27.273 209 112 9 120 294 18 220 7.52e-14 73.2
Msa1296960 AT1G09000.1 22.517 302 145 11 127 385 75 330 7.92e-14 73.6
Msa1296960 AT1G01140.3 27.273 209 112 9 120 294 18 220 9.20e-14 73.2
Msa1296960 AT3G63280.4 22.327 318 174 9 102 388 39 314 1.03e-13 73.2
Msa1296960 AT5G10930.1 27.751 209 109 10 121 294 12 213 1.37e-13 72.4
Msa1296960 AT2G26980.2 28.846 208 108 10 121 294 14 215 1.38e-13 70.9
Msa1296960 AT4G32830.1 25.455 220 126 8 119 307 29 241 2.10e-13 70.9
Msa1296960 AT3G63280.2 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1296960 AT3G63280.3 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1296960 AT3G63280.1 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1296960 AT2G26980.1 27.885 208 110 9 121 294 14 215 2.40e-13 71.2
Msa1296960 AT2G26980.3 27.885 208 110 9 121 294 14 215 2.88e-13 71.6
Msa1296960 AT2G26980.4 27.885 208 110 9 121 294 24 225 3.16e-13 71.2
Msa1296960 AT5G18700.1 26.761 213 125 6 119 306 2 208 4.91e-13 71.6
Msa1296960 AT2G26980.5 27.885 208 110 9 121 294 14 215 5.15e-13 70.5
Msa1296960 AT5G01810.3 25.728 206 116 8 121 294 12 212 7.67e-13 69.7
Msa1296960 AT5G01810.1 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa1296960 AT5G01810.2 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa1296960 AT5G21222.1 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1296960 AT5G21222.2 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1296960 AT5G21222.4 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1296960 AT5G21222.3 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1296960 AT4G32660.4 25.200 250 145 9 173 386 41 284 1.47e-12 68.2
Msa1296960 AT2G30360.1 27.143 210 110 7 121 294 21 223 2.81e-12 68.6
Msa1296960 AT2G25880.1 25.366 205 117 7 119 294 23 220 3.32e-12 67.0
Msa1296960 AT5G58380.1 25.110 227 126 11 119 312 10 225 3.39e-12 68.2
Msa1296960 AT4G18700.1 25.728 206 116 8 121 294 26 226 3.46e-12 68.2
Msa1296960 AT5G35410.2 27.404 208 109 9 121 294 11 210 3.57e-12 67.8
Msa1296960 AT2G25880.4 25.366 205 117 7 119 294 36 233 3.67e-12 67.0
Msa1296960 AT4G24400.2 26.341 205 115 8 121 294 9 208 3.79e-12 67.8
Msa1296960 AT4G24400.1 26.341 205 115 8 121 294 9 208 5.31e-12 67.4
Msa1296960 AT2G25880.3 25.366 205 117 7 119 294 84 281 5.80e-12 67.0
Msa1296960 AT5G35410.1 27.404 208 109 9 121 294 11 210 7.15e-12 67.0
Msa1296960 AT1G30270.1 25.962 208 114 10 121 294 31 232 7.48e-12 67.4
Msa1296960 AT2G38490.1 26.761 213 115 10 121 297 28 235 8.83e-12 67.0
Msa1296960 AT1G30270.2 25.962 208 114 10 121 294 31 232 9.46e-12 67.0
Msa1296960 AT1G07150.2 23.986 296 154 11 127 391 15 270 1.91e-11 65.9
Msa1296960 AT5G45820.1 25.490 204 119 8 121 294 12 212 2.27e-11 65.5
Msa1296960 AT4G14580.1 25.688 218 122 8 110 294 13 223 2.33e-11 65.5
Msa1296960 AT5G45810.1 26.699 206 114 9 121 294 28 228 2.37e-11 65.9
Msa1296960 AT1G07150.1 23.986 296 154 11 127 391 29 284 2.57e-11 65.5
Msa1296960 AT1G69220.1 22.185 302 170 11 121 395 249 512 4.84e-11 65.1
Msa1296960 AT4G30960.1 26.471 204 117 9 121 294 24 224 9.53e-11 63.5

Find 135 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAGCAACTTTACAATAT+TGG 0.174324 8_3:+56864186 None:intergenic
CTACTTTCCACATTTCTAAT+TGG 0.197072 8_3:+56860122 None:intergenic
CATGGTCAATCATTACATTA+TGG 0.216955 8_3:+56862989 None:intergenic
TTGGGGAATTTATTATTATA+AGG 0.235099 8_3:+56866339 None:intergenic
ATCACCTTCTTCTTCTTAAC+AGG 0.265122 8_3:+56865839 None:intergenic
TTTCTAATTGGATTGAAGTA+TGG 0.265994 8_3:+56860134 None:intergenic
TCAAGCAACTTTACAATATT+GGG 0.269800 8_3:+56864187 None:intergenic
CTGATGCTTGTTGTGATATA+TGG 0.290243 8_3:-56860076 Msa1296960:three_prime_UTR
GAAGAAAGAGAGAAAAGATT+TGG 0.291801 8_3:+56866320 None:intergenic
AAGAAAGAGAGAAAAGATTT+GGG 0.292694 8_3:+56866321 None:intergenic
TTCTCTTGCCCTATTGCCTT+TGG 0.297403 8_3:-56859958 Msa1296960:three_prime_UTR
TCGTTCGTCCTAAGGAATAT+TGG 0.306347 8_3:-56866134 Msa1296960:CDS
GTCAAGGGAAAATAATTAAA+AGG 0.308918 8_3:+56866465 None:intergenic
TTCTTCATGCAATAGGTACT+TGG 0.333411 8_3:-56861333 Msa1296960:intron
ATGGTCAATCATTACATTAT+GGG 0.347598 8_3:+56862990 None:intergenic
AATCGGAAACCAAAGGCAAT+AGG 0.350752 8_3:+56859949 None:intergenic
CTAGCCTTGGATGCAGCGCC+GGG 0.352434 8_3:+56866177 None:intergenic
TTTATGGTGGAACTTGCATT+TGG 0.353006 8_3:-56860020 Msa1296960:three_prime_UTR
CGTTCGTCCTAAGGAATATT+GGG 0.365960 8_3:-56866133 Msa1296960:CDS
CAACTTGTCGCGCGATAGAT+TGG 0.369074 8_3:-56866400 Msa1296960:CDS
AGTCTTGGTTGTATGTTTGC+CGG 0.369394 8_3:-56862016 Msa1296960:CDS
ATACAAGACTTTAACTCAAA+TGG 0.385733 8_3:+56859844 None:intergenic
TAAGCTTCGCCTTATAGATT+GGG 0.388647 8_3:-56862959 Msa1296960:CDS
GAGGCCGCGGACGGCGGAAA+TGG 0.391900 8_3:+56866256 None:intergenic
GTCGACATGGCGCAGAAATT+CGG 0.393607 8_3:-56866216 Msa1296960:CDS
TGAAGATCAACAAGAAGCTC+TGG 0.398089 8_3:+56862067 None:intergenic
TGGTGAGGAAAGTGGGAAGG+GGG 0.401011 8_3:-56865931 Msa1296960:CDS
CCTAGCCTTGGATGCAGCGC+CGG 0.401329 8_3:+56866176 None:intergenic
ATGATTACTCTCTAGATTTG+TGG 0.402583 8_3:-56862039 Msa1296960:CDS
TCTCTAGATTTGTGGAGTCT+TGG 0.405112 8_3:-56862031 Msa1296960:CDS
TTCCACCAAAATAACAAAAT+CGG 0.406762 8_3:+56859932 None:intergenic
GTAAGCTTCGCCTTATAGAT+TGG 0.409217 8_3:-56862960 Msa1296960:CDS
CCGCCCCGGCGCTGCATCCA+AGG 0.409970 8_3:-56866181 Msa1296960:CDS
CATAAAAGAACGGCTCCTTC+CGG 0.410947 8_3:+56861802 None:intergenic
CCGGCGCTGCATCCAAGGCT+AGG 0.413393 8_3:-56866176 Msa1296960:CDS
TCGTAATCCCAATATTCCTT+AGG 0.421950 8_3:+56866126 None:intergenic
GTGTGTTGTTACAGATATTC+CGG 0.422815 8_3:-56861821 Msa1296960:intron
TATCGCGCGACAAGTTGAAT+TGG 0.429474 8_3:+56866406 None:intergenic
AATCTAAAACTAACATTCGT+TGG 0.430858 8_3:+56859792 None:intergenic
GACTTGGGGTCTTCGACTGC+TGG 0.437978 8_3:+56864152 None:intergenic
GTGGTGAGGAAAGTGGGAAG+GGG 0.445623 8_3:-56865932 Msa1296960:CDS
ATCAACTGGTCAAGATAGCC+AGG 0.451077 8_3:-56861764 Msa1296960:CDS
TTATGGTGGAACTTGCATTT+GGG 0.451883 8_3:-56860019 Msa1296960:three_prime_UTR
ATCGGAAACCAAAGGCAATA+GGG 0.453867 8_3:+56859950 None:intergenic
AAAATATTACAGAATCTTTG+TGG 0.454458 8_3:-56864214 Msa1296960:CDS
GGACGAGGAGGAGGAGGCCG+CGG 0.455638 8_3:+56866243 None:intergenic
ATAATGTTCGTGTGGCTTCA+AGG 0.460306 8_3:-56862903 Msa1296960:intron
CTTGCAGAGTTCTATCATCC+TGG 0.462557 8_3:-56862934 Msa1296960:CDS
TTGTTGAGGAGGAGCGGCGG+AGG 0.464840 8_3:+56866298 None:intergenic
ATCTAAAACTAACATTCGTT+GGG 0.465336 8_3:+56859793 None:intergenic
CAGGGAGCAAGATGATTATG+AGG 0.465533 8_3:-56865954 Msa1296960:CDS
GGACGGCGGAAATGGTTGTT+CGG 0.468995 8_3:+56866264 None:intergenic
TCGACGGGTGGACGAGGAGG+AGG 0.470054 8_3:+56866234 None:intergenic
CATATTCAAATATGAGACTT+GGG 0.472470 8_3:+56864137 None:intergenic
TGTCAACGTCGTTCGTCCTA+AGG 0.474374 8_3:-56866142 Msa1296960:CDS
GAATTTCTGCGCCATGTCGA+CGG 0.478106 8_3:+56866218 None:intergenic
TTCGCAAGGGATTATGCATC+GGG 0.480545 8_3:-56863022 Msa1296960:CDS
AATTTCTGCGCCATGTCGAC+GGG 0.480934 8_3:+56866219 None:intergenic
TCACGATAACTATGATCAAC+TGG 0.483295 8_3:-56861778 Msa1296960:CDS
TAATTGGATTGAAGTATGGA+TGG 0.486342 8_3:+56860138 None:intergenic
TGGTTGTATGTTTGCCGGGA+TGG 0.488196 8_3:-56862011 Msa1296960:intron
GAGGAGGAGGCCGCGGACGG+CGG 0.488703 8_3:+56866250 None:intergenic
AAATGGTTGTTCGGCGGTGA+CGG 0.488819 8_3:+56866273 None:intergenic
AAATTTGCTGCTTACCATCC+CGG 0.491733 8_3:+56861997 None:intergenic
GTATTTGTAACAGGCATAGC+AGG 0.493852 8_3:-56861147 Msa1296960:intron
ACATATTCAAATATGAGACT+TGG 0.498562 8_3:+56864136 None:intergenic
ACGGGTGGACGAGGAGGAGG+AGG 0.498801 8_3:+56866237 None:intergenic
TGCAGCGCCGGGGCGGCGAG+TGG 0.500595 8_3:+56866188 None:intergenic
CGGCGCTGCATCCAAGGCTA+GGG 0.504072 8_3:-56866175 Msa1296960:CDS
GTCTTGGTTGTATGTTTGCC+GGG 0.506026 8_3:-56862015 Msa1296960:CDS
CCAATAAGTGCTGCAAAATG+TGG 0.509814 8_3:+56861261 None:intergenic
CCTTGGATGCAGCGCCGGGG+CGG 0.510068 8_3:+56866181 None:intergenic
GGTGGTGAGGAAAGTGGGAA+GGG 0.511063 8_3:-56865933 Msa1296960:CDS
ACGAAACCCTCACCGTTCAG+TGG 0.515437 8_3:-56866107 Msa1296960:CDS
TCCTCGTCCACCCGTCGACA+TGG 0.515882 8_3:-56866229 Msa1296960:CDS
GAGGAGGAGGAGGCCGCGGA+CGG 0.516584 8_3:+56866247 None:intergenic
GGAAAATCCACTCGCCGCCC+CGG 0.524127 8_3:-56866195 Msa1296960:CDS
ATCAGCATAAACCCTAGCCT+TGG 0.527589 8_3:+56866164 None:intergenic
CGAACATTATATTCCTTCCC+AGG 0.528772 8_3:+56862916 None:intergenic
GAATAAGTATCGCATTGAGT+TGG 0.531332 8_3:-56861286 Msa1296960:CDS
GCCATGTCGACGGGTGGACG+AGG 0.531348 8_3:+56866228 None:intergenic
CGGCGGTGACGGAGTTGTTG+AGG 0.542339 8_3:+56866284 None:intergenic
CTTCAATCCAATTAGAAATG+TGG 0.542866 8_3:-56860129 Msa1296960:CDS
TCTTCATGCAATAGGTACTT+GGG 0.546369 8_3:-56861332 Msa1296960:intron
TGGTCAATCATTACATTATG+GGG 0.546942 8_3:+56862991 None:intergenic
CGAAACCCTCACCGTTCAGT+GGG 0.549905 8_3:-56866106 Msa1296960:CDS
TATGAGGTGGTGAGGAAAGT+GGG 0.551839 8_3:-56865938 Msa1296960:CDS
AAGCTTCGCCTTATAGATTG+GGG 0.553750 8_3:-56862958 Msa1296960:CDS
TTTGCTTGTAGATATTTCAA+AGG 0.554007 8_3:-56862091 Msa1296960:intron
ACAACCATTTCCGCCGTCCG+CGG 0.556867 8_3:-56866260 Msa1296960:CDS
CAAACCTGTTAAGAAGAAGA+AGG 0.558576 8_3:-56865843 Msa1296960:intron
ATTCGCAAGGGATTATGCAT+CGG 0.562645 8_3:-56863023 Msa1296960:CDS
TTCTGCGCCATGTCGACGGG+TGG 0.563527 8_3:+56866222 None:intergenic
GGCGAAGCTTACGCTGCTCA+TGG 0.566986 8_3:+56862971 None:intergenic
TGGATTATTGCCATTCGCAA+GGG 0.572093 8_3:-56863035 Msa1296960:CDS
TTGGATTATTGCCATTCGCA+AGG 0.572743 8_3:-56863036 Msa1296960:CDS
AGGTGGTGAGGAAAGTGGGA+AGG 0.574076 8_3:-56865934 Msa1296960:CDS
TTGCAGAGTTCTATCATCCT+GGG 0.574095 8_3:-56862933 Msa1296960:CDS
AAGATGATTATGAGGTGGTG+AGG 0.574125 8_3:-56865946 Msa1296960:CDS
GAAGATCAACAAGAAGCTCT+GGG 0.576772 8_3:+56862068 None:intergenic
AATTGGATTGAAGTATGGAT+GGG 0.580143 8_3:+56860139 None:intergenic
ATAAATGGAAAATGAGTCAA+GGG 0.581241 8_3:+56866450 None:intergenic
TATTACAGAATCTTTGTGGA+GGG 0.582117 8_3:-56864210 Msa1296960:CDS
GAATATTAATGCAGATCAAG+AGG 0.585346 8_3:-56864243 Msa1296960:intron
ACATTAATGAACCTTTGCCA+TGG 0.589071 8_3:+56861121 None:intergenic
TTATGAGGTGGTGAGGAAAG+TGG 0.590823 8_3:-56865939 Msa1296960:CDS
GCCCACTGCAAAAGAAGCCA+TGG 0.601915 8_3:-56860949 Msa1296960:intron
AGCTTCGCCTTATAGATTGG+GGG 0.605039 8_3:-56862957 Msa1296960:CDS
ACAGGCATAGCAGGAAGCCA+TGG 0.605939 8_3:-56861138 Msa1296960:intron
CATAAATGGAAAATGAGTCA+AGG 0.609072 8_3:+56866449 None:intergenic
AATATTAATGCAGATCAAGA+GGG 0.616701 8_3:-56864242 Msa1296960:intron
GATGCATAATCCCTTGCGAA+TGG 0.619795 8_3:+56863025 None:intergenic
CAATAAGTGCTGCAAAATGT+GGG 0.623756 8_3:+56861262 None:intergenic
TACGATACGATCACCAAGAA+CGG 0.628422 8_3:-56860971 Msa1296960:CDS
ATAGCAGGAAGCCATGGCAA+AGG 0.632015 8_3:-56861132 Msa1296960:CDS
ACGGAGTTGTTGAGGAGGAG+CGG 0.635011 8_3:+56866292 None:intergenic
ATAACAAAATCGGAAACCAA+AGG 0.635578 8_3:+56859942 None:intergenic
ATATTCAAATATGAGACTTG+GGG 0.638686 8_3:+56864138 None:intergenic
ATATTACAGAATCTTTGTGG+AGG 0.642832 8_3:-56864211 Msa1296960:CDS
TTATCGTGACCATAAAAGAA+CGG 0.643726 8_3:+56861792 None:intergenic
GAGTTGTTGAGGAGGAGCGG+CGG 0.657530 8_3:+56866295 None:intergenic
CGGTGACGGAGTTGTTGAGG+AGG 0.657562 8_3:+56866287 None:intergenic
TCAACACTTGACTGTTCCTG+AGG 0.658381 8_3:-56861092 Msa1296960:intron
GTTGTTACAGATATTCCGGA+AGG 0.660267 8_3:-56861817 Msa1296960:intron
ATGTCGACGGGTGGACGAGG+AGG 0.661644 8_3:+56866231 None:intergenic
CGGCGGAAATGGTTGTTCGG+CGG 0.661894 8_3:+56866267 None:intergenic
AGAAAGAGAGAAAAGATTTG+GGG 0.663467 8_3:+56866322 None:intergenic
CATGCAATAGGTACTTGGGA+CGG 0.665861 8_3:-56861328 Msa1296960:intron
AGAGTTCTATCATCCTGGGA+AGG 0.669867 8_3:-56862929 Msa1296960:CDS
GAAGGAATATAATGTTCGTG+TGG 0.681364 8_3:-56862911 Msa1296960:CDS
GGAGCAAGATGATTATGAGG+TGG 0.686228 8_3:-56865951 Msa1296960:CDS
TAGCCTTGGATGCAGCGCCG+GGG 0.687087 8_3:+56866178 None:intergenic
AAACCCTCACCGTTCAGTGG+GGG 0.687592 8_3:-56866104 Msa1296960:intron
TCAACTGGTCAAGATAGCCA+GGG 0.708823 8_3:-56861763 Msa1296960:intron
GAAACCCTCACCGTTCAGTG+GGG 0.713472 8_3:-56866105 Msa1296960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATATAATATGACAAT+CGG + chr8_3:56862029-56862048 None:intergenic 10.0%
!! ATAAAAAATTCATAATTATC+CGG - chr8_3:56862835-56862854 Msa1296960:intron 10.0%
!!! AATAATTAATGTTTTTTGAG+AGG + chr8_3:56859782-56859801 None:intergenic 15.0%
!!! TAATAGCCTTAATTTTTTTT+AGG - chr8_3:56859809-56859828 Msa1296960:three_prime_UTR 15.0%
!!! AATAGCCTTAATTTTTTTTA+GGG - chr8_3:56859810-56859829 Msa1296960:three_prime_UTR 15.0%
!!! TAATTGATTTTGTATAGTTT+AGG - chr8_3:56860273-56860292 Msa1296960:intron 15.0%
!!! TGATTTTATTTTCTCTTTTT+AGG - chr8_3:56860489-56860508 Msa1296960:intron 15.0%
!!! GATTTTATTTTCTCTTTTTA+GGG - chr8_3:56860490-56860509 Msa1296960:intron 15.0%
!! AATCAAAGATCATAATAATT+GGG - chr8_3:56861372-56861391 Msa1296960:intron 15.0%
!!! TTTCTTTTTCTAAACTATAA+TGG - chr8_3:56861994-56862013 Msa1296960:intron 15.0%
!!! TATACTAGATGTTTTTTTAT+AGG - chr8_3:56862376-56862395 Msa1296960:intron 15.0%
!!! ATACTAGATGTTTTTTTATA+GGG - chr8_3:56862377-56862396 Msa1296960:intron 15.0%
!!! TTTTAAAATTTCAAGTTTGA+AGG - chr8_3:56863642-56863661 Msa1296960:intron 15.0%
!! TGTATAAATGAGATAAAAAA+AGG + chr8_3:56864195-56864214 None:intergenic 15.0%
!! AATAAAAACATTGCATTATA+AGG + chr8_3:56864339-56864358 None:intergenic 15.0%
!!! GTTTTTATTGTTTAGTATTT+AGG - chr8_3:56864350-56864369 Msa1296960:intron 15.0%
!!! AACTTTCATTATTTTTATGA+AGG - chr8_3:56865291-56865310 Msa1296960:intron 15.0%
!! AATGAAAATACTAAAAGATT+GGG + chr8_3:56865392-56865411 None:intergenic 15.0%
!!! TTTTAGTAAAGAAACTATTT+AGG - chr8_3:56865537-56865556 Msa1296960:intron 15.0%
!!! AAAAGTATTGAAATAGAAAA+TGG - chr8_3:56865772-56865791 Msa1296960:intron 15.0%
!!! AAAATCTGAACTTTTATTTA+TGG - chr8_3:56866273-56866292 Msa1296960:CDS 15.0%
!!! ATAGCCTTAATTTTTTTTAG+GGG - chr8_3:56859811-56859830 Msa1296960:three_prime_UTR 20.0%
!!! TTTTCCCCTAAAAAAAATTA+AGG + chr8_3:56859818-56859837 None:intergenic 20.0%
!! TTGGGGAATTTATTATTATA+AGG + chr8_3:56859973-56859992 None:intergenic 20.0%
!! TTTAGGAAAATGAAATTCTA+GGG - chr8_3:56860290-56860309 Msa1296960:intron 20.0%
!! TATGTGTAATTACTCATAAA+TGG - chr8_3:56860641-56860660 Msa1296960:intron 20.0%
!! AACATAAAAGATAGCATTAT+TGG + chr8_3:56861077-56861096 None:intergenic 20.0%
!! GAATCAAAGATCATAATAAT+TGG - chr8_3:56861371-56861390 Msa1296960:intron 20.0%
!! ATCAAAGATCATAATAATTG+GGG - chr8_3:56861373-56861392 Msa1296960:intron 20.0%
!!! ATTTAGTTTCTTTGTACTTT+TGG - chr8_3:56861861-56861880 Msa1296960:intron 20.0%
!! TTAATATTCAGAAGAATATG+AGG + chr8_3:56862055-56862074 None:intergenic 20.0%
!! AAAATATTACAGAATCTTTG+TGG - chr8_3:56862095-56862114 Msa1296960:intron 20.0%
!! AATTTCTCAGAAAACATAAA+TGG + chr8_3:56862734-56862753 None:intergenic 20.0%
!!! CTAATAAGTTGTTTTATAGT+TGG + chr8_3:56862906-56862925 None:intergenic 20.0%
!!! GTCTTTACTCTTTTTTTTAT+AGG - chr8_3:56863444-56863463 Msa1296960:intron 20.0%
!! TTGTCATTACATAATTACTT+AGG - chr8_3:56863562-56863581 Msa1296960:intron 20.0%
!!! TTTTTTTAAGGCAAAAATGT+TGG + chr8_3:56863826-56863845 None:intergenic 20.0%
!!! TTGGTAGTTTGTTTTTTTTA+AGG + chr8_3:56863838-56863857 None:intergenic 20.0%
!! TACGTGGTAAATATTAATAA+TGG - chr8_3:56864001-56864020 Msa1296960:intron 20.0%
!! CAATGAAAATACTAAAAGAT+TGG + chr8_3:56865393-56865412 None:intergenic 20.0%
!! ATAGTTTCTTTACTAAAAAG+AGG + chr8_3:56865535-56865554 None:intergenic 20.0%
!! AATCAGTAAAAAAACTGTTT+AGG - chr8_3:56865560-56865579 Msa1296960:intron 20.0%
!! AAAAAACAAGAAAAAATCCT+AGG + chr8_3:56865692-56865711 None:intergenic 20.0%
!!! AATGGTTTGTTTAACATATT+AGG - chr8_3:56865790-56865809 Msa1296960:intron 20.0%
!! TTGTTTAACATATTAGGATT+AGG - chr8_3:56865796-56865815 Msa1296960:intron 20.0%
!!! TGATTTTTTACTTCTAATAG+TGG + chr8_3:56865863-56865882 None:intergenic 20.0%
!! AAAATATTGATCAGATACAT+TGG - chr8_3:56865920-56865939 Msa1296960:CDS 20.0%
!! TATTCAATGAATCTAAAAAG+TGG - chr8_3:56865944-56865963 Msa1296960:CDS 20.0%
!! TAATAAAATATACACCCATA+TGG + chr8_3:56865990-56866009 None:intergenic 20.0%
!!! ATTGAATTTTACAACAGAAA+GGG + chr8_3:56866325-56866344 None:intergenic 20.0%
!!! AATTGAATTTTACAACAGAA+AGG + chr8_3:56866326-56866345 None:intergenic 20.0%
! GTCAAGGGAAAATAATTAAA+AGG + chr8_3:56859847-56859866 None:intergenic 25.0%
! ATAAATGGAAAATGAGTCAA+GGG + chr8_3:56859862-56859881 None:intergenic 25.0%
!! TTGGAATTGCAAATGTTTTA+CGG + chr8_3:56859887-56859906 None:intergenic 25.0%
! AAGAAAGAGAGAAAAGATTT+GGG + chr8_3:56859991-56860010 None:intergenic 25.0%
! GTTTAGGAAAATGAAATTCT+AGG - chr8_3:56860289-56860308 Msa1296960:intron 25.0%
!! TTTTGTGTTTGTGATTTTTC+AGG - chr8_3:56860336-56860355 Msa1296960:intron 25.0%
!! TTTGTGTTTGTGATTTTTCA+GGG - chr8_3:56860337-56860356 Msa1296960:intron 25.0%
! ATAGCTGATAAATGATGATA+GGG - chr8_3:56860568-56860587 Msa1296960:intron 25.0%
! AAATTGGACTAAGATTCATA+AGG + chr8_3:56860923-56860942 None:intergenic 25.0%
! AAGATAATGATCATGATGTT+AGG + chr8_3:56860979-56860998 None:intergenic 25.0%
! TTCATTCAAAGAAGAGAAAA+GGG + chr8_3:56861104-56861123 None:intergenic 25.0%
! ATTCATTCAAAGAAGAGAAA+AGG + chr8_3:56861105-56861124 None:intergenic 25.0%
! AACTAACTAATAAGATTCTG+AGG + chr8_3:56861162-56861181 None:intergenic 25.0%
! TTATGATCTTTGATTCTCTT+AGG + chr8_3:56861367-56861386 None:intergenic 25.0%
! TATAATATGACAATCGGAAA+GGG + chr8_3:56862023-56862042 None:intergenic 25.0%
! ATATAATATGACAATCGGAA+AGG + chr8_3:56862024-56862043 None:intergenic 25.0%
! AATATTAATGCAGATCAAGA+GGG - chr8_3:56862067-56862086 Msa1296960:CDS 25.0%
! TCAAGCAACTTTACAATATT+GGG + chr8_3:56862125-56862144 None:intergenic 25.0%
! ATATTCAAATATGAGACTTG+GGG + chr8_3:56862174-56862193 None:intergenic 25.0%
! CATATTCAAATATGAGACTT+GGG + chr8_3:56862175-56862194 None:intergenic 25.0%
! ACATATTCAAATATGAGACT+TGG + chr8_3:56862176-56862195 None:intergenic 25.0%
! TTATATCTATGAACTTCTGA+AGG - chr8_3:56862253-56862272 Msa1296960:intron 25.0%
! TTTAACAAATACTTCAGTCT+TGG - chr8_3:56862480-56862499 Msa1296960:intron 25.0%
!! TGTAAATGAACTGTACATTT+TGG - chr8_3:56862509-56862528 Msa1296960:intron 25.0%
!!! TACATTTTGGTTGGTATTTT+TGG - chr8_3:56862522-56862541 Msa1296960:intron 25.0%
!! TTTAATGAAGTTTTCTGATC+AGG - chr8_3:56862682-56862701 Msa1296960:intron 25.0%
! TGACAATACATACATTAACA+AGG + chr8_3:56863131-56863150 None:intergenic 25.0%
! ATGGTCAATCATTACATTAT+GGG + chr8_3:56863322-56863341 None:intergenic 25.0%
! AAGTTTGAAGGTTAAGTTTA+TGG - chr8_3:56863654-56863673 Msa1296960:intron 25.0%
! AGTTTGAAGGTTAAGTTTAT+GGG - chr8_3:56863655-56863674 Msa1296960:intron 25.0%
! ATATAAGGATTGAAGTGATA+AGG - chr8_3:56863685-56863704 Msa1296960:intron 25.0%
! TTATTATGTTACGTTAGTGA+GGG + chr8_3:56863728-56863747 None:intergenic 25.0%
! CTATTATGTTATGTTAGTGA+GGG + chr8_3:56863800-56863819 None:intergenic 25.0%
! TTTCTTGAAGAGAAAAATGT+TGG + chr8_3:56863857-56863876 None:intergenic 25.0%
!!! AAAATGATCATTTGTTATGC+TGG - chr8_3:56863918-56863937 Msa1296960:intron 25.0%
!!! AAATGATCATTTGTTATGCT+GGG - chr8_3:56863919-56863938 Msa1296960:intron 25.0%
! GTGGTAAATATTAATAATGG+TGG - chr8_3:56864004-56864023 Msa1296960:intron 25.0%
!! ATTTTCTCATTGTAATCTGA+TGG + chr8_3:56864052-56864071 None:intergenic 25.0%
! CAGATTACAATGAGAAAATA+TGG - chr8_3:56864053-56864072 Msa1296960:intron 25.0%
! AATATGGTTTAGTCCATAAT+AGG - chr8_3:56864069-56864088 Msa1296960:intron 25.0%
! TTTGCTTGTAGATATTTCAA+AGG - chr8_3:56864218-56864237 Msa1296960:CDS 25.0%
! TATTGTTTAGTATTTAGGCA+TGG - chr8_3:56864355-56864374 Msa1296960:intron 25.0%
! ATATCTGAATAATTCCACAT+TGG - chr8_3:56864669-56864688 Msa1296960:intron 25.0%
! TATCTGAATAATTCCACATT+GGG - chr8_3:56864670-56864689 Msa1296960:intron 25.0%
! ATAAAAATAAGTAAGCTGTG+TGG + chr8_3:56864809-56864828 None:intergenic 25.0%
!! TTTTTCTTTCTTCATGCAAT+AGG - chr8_3:56864969-56864988 Msa1296960:intron 25.0%
! CCTGTTACAAATACAATATT+GGG + chr8_3:56865156-56865175 None:intergenic 25.0%
! TTAGAATCAACCATCAATTT+CGG + chr8_3:56865631-56865650 None:intergenic 25.0%
!!! TTTTTTACTTCTAATAGTGG+CGG + chr8_3:56865860-56865879 None:intergenic 25.0%
!!! ATATTTTAGACCAGATACAT+CGG + chr8_3:56865907-56865926 None:intergenic 25.0%
! TGCTTATAATAGTTACCATA+TGG - chr8_3:56865972-56865991 Msa1296960:intron 25.0%
! GCTTATAATAGTTACCATAT+GGG - chr8_3:56865973-56865992 Msa1296960:intron 25.0%
!!! TGTATTTTGCTGATTGTATT+TGG - chr8_3:56866060-56866079 Msa1296960:intron 25.0%
!! TACTCATTTTACAGAATGTT+TGG - chr8_3:56866121-56866140 Msa1296960:CDS 25.0%
! ATAAATCTTAAATGCTATGC+AGG - chr8_3:56866147-56866166 Msa1296960:CDS 25.0%
! TTTCTAATTGGATTGAAGTA+TGG + chr8_3:56866178-56866197 None:intergenic 25.0%
!!! ATCTGAACTTTTATTTATGG+TGG - chr8_3:56866276-56866295 Msa1296960:CDS 25.0%
!! TTGAATTTTACAACAGAAAG+GGG + chr8_3:56866324-56866343 None:intergenic 25.0%
! TTCCACCAAAATAACAAAAT+CGG + chr8_3:56866380-56866399 None:intergenic 25.0%
! ATACAAGACTTTAACTCAAA+TGG + chr8_3:56866468-56866487 None:intergenic 25.0%
!!! TTCGTTGGGTATATTTTTTT+CGG + chr8_3:56866505-56866524 None:intergenic 25.0%
!! ATCTAAAACTAACATTCGTT+GGG + chr8_3:56866519-56866538 None:intergenic 25.0%
!! AATCTAAAACTAACATTCGT+TGG + chr8_3:56866520-56866539 None:intergenic 25.0%
CATAAATGGAAAATGAGTCA+AGG + chr8_3:56859863-56859882 None:intergenic 30.0%
! CTTGACTCATTTTCCATTTA+TGG - chr8_3:56859861-56859880 Msa1296960:three_prime_UTR 30.0%
! AAATGTTTTACGGCCATAAA+TGG + chr8_3:56859877-56859896 None:intergenic 30.0%
AGAAAGAGAGAAAAGATTTG+GGG + chr8_3:56859990-56860009 None:intergenic 30.0%
GAAGAAAGAGAGAAAAGATT+TGG + chr8_3:56859992-56860011 None:intergenic 30.0%
! AAATACAGTGAGGTTTTTGA+AGG - chr8_3:56860401-56860420 Msa1296960:intron 30.0%
!!! CTCTTTTTAGGGTTTGATTT+AGG - chr8_3:56860501-56860520 Msa1296960:intron 30.0%
CATAGCTGATAAATGATGAT+AGG - chr8_3:56860567-56860586 Msa1296960:intron 30.0%
ATGAGTATGCTAGAAATTTC+AGG + chr8_3:56860735-56860754 None:intergenic 30.0%
! TCTTCTGTCTTTTCATACAT+TGG - chr8_3:56860757-56860776 Msa1296960:intron 30.0%
! CTTCTGTCTTTTCATACATT+GGG - chr8_3:56860758-56860777 Msa1296960:intron 30.0%
TATGTCATGCTACTCTAAAT+TGG + chr8_3:56860939-56860958 None:intergenic 30.0%
ATGATGTGTATAATCCGTAA+TGG + chr8_3:56861022-56861041 None:intergenic 30.0%
! TTCTTTTTGATGTCGTTCAA+TGG + chr8_3:56861222-56861241 None:intergenic 30.0%
! TTTCTTTTGCAAGAACATAG+AGG - chr8_3:56861276-56861295 Msa1296960:CDS 30.0%
!! ATCCTTCTCTGAAATTGAAT+GGG + chr8_3:56861435-56861454 None:intergenic 30.0%
!! TATCCTTCTCTGAAATTGAA+TGG + chr8_3:56861436-56861455 None:intergenic 30.0%
! TGGCAGATGTAAAATCTTTT+AGG - chr8_3:56861468-56861487 Msa1296960:intron 30.0%
CTCTTGAATTTCATATGCAA+AGG - chr8_3:56861528-56861547 Msa1296960:intron 30.0%
CATTTATCATCAAGTTACCA+TGG + chr8_3:56861618-56861637 None:intergenic 30.0%
! CATGGTAACTTGATGATAAA+TGG - chr8_3:56861616-56861635 Msa1296960:intron 30.0%
! ATATAACTGACTCCATCATA+TGG - chr8_3:56861652-56861671 Msa1296960:intron 30.0%
! TATAACTGACTCCATCATAT+GGG - chr8_3:56861653-56861672 Msa1296960:intron 30.0%
AAAATAGAAAATGTCGTGCT+GGG - chr8_3:56861777-56861796 Msa1296960:CDS 30.0%
TATTCTGTAGCATAACACTA+TGG + chr8_3:56861908-56861927 None:intergenic 30.0%
TATTCTCAAGAGTGAACAAA+TGG + chr8_3:56861941-56861960 None:intergenic 30.0%
TGAGAATATGTATGATACAG+TGG - chr8_3:56861953-56861972 Msa1296960:intron 30.0%
GAATATTAATGCAGATCAAG+AGG - chr8_3:56862066-56862085 Msa1296960:CDS 30.0%
ATATTACAGAATCTTTGTGG+AGG - chr8_3:56862098-56862117 Msa1296960:intron 30.0%
TATTACAGAATCTTTGTGGA+GGG - chr8_3:56862099-56862118 Msa1296960:intron 30.0%
GTCAAGCAACTTTACAATAT+TGG + chr8_3:56862126-56862145 None:intergenic 30.0%
! ATGTCGCTTGTTAAGAAAAA+AGG + chr8_3:56862294-56862313 None:intergenic 30.0%
!! AATGAACTGTACATTTTGGT+TGG - chr8_3:56862513-56862532 Msa1296960:intron 30.0%
TGGTTTAGATCAATCATAAC+CGG + chr8_3:56862857-56862876 None:intergenic 30.0%
!! AAGTTGTTTTATAGTTGGCA+TGG + chr8_3:56862901-56862920 None:intergenic 30.0%
CAGTAAACATTTGAATGAAC+AGG + chr8_3:56862974-56862993 None:intergenic 30.0%
!!! TGTTCCAAACTCTAAAGTTT+TGG - chr8_3:56862992-56863011 Msa1296960:CDS 30.0%
AATGTATGTATTGTCACTGT+TGG - chr8_3:56863135-56863154 Msa1296960:intron 30.0%
ATGTATGTATTGTCACTGTT+GGG - chr8_3:56863136-56863155 Msa1296960:intron 30.0%
TTTCAATAGCCACAAAAAAC+TGG + chr8_3:56863222-56863241 None:intergenic 30.0%
! AGTTATTTGAAACTTCTACC+AGG - chr8_3:56863248-56863267 Msa1296960:intron 30.0%
TGGTCAATCATTACATTATG+GGG + chr8_3:56863321-56863340 None:intergenic 30.0%
CATGGTCAATCATTACATTA+TGG + chr8_3:56863323-56863342 None:intergenic 30.0%
GTTTGAAGGTTAAGTTTATG+GGG - chr8_3:56863656-56863675 Msa1296960:intron 30.0%
TTTGAAGGTTAAGTTTATGG+GGG - chr8_3:56863657-56863676 Msa1296960:intron 30.0%
GCTATTATGTTATGTTAGTG+AGG + chr8_3:56863801-56863820 None:intergenic 30.0%
TGATGACAATCAACCTATTA+TGG + chr8_3:56864085-56864104 None:intergenic 30.0%
ATGATTACTCTCTAGATTTG+TGG - chr8_3:56864270-56864289 Msa1296960:intron 30.0%
CTAAGGTTTAACTCAACAAA+TGG + chr8_3:56864386-56864405 None:intergenic 30.0%
TTATCGTGACCATAAAAGAA+CGG + chr8_3:56864520-56864539 None:intergenic 30.0%
!! TTCAGTACTACTTTTACTCT+TGG - chr8_3:56864635-56864654 Msa1296960:intron 30.0%
!!! ATGTATCTTGTTTTTCTGCT+GGG - chr8_3:56864724-56864743 Msa1296960:intron 30.0%
TAGAAGAAAAGTTGGAAACA+GGG + chr8_3:56864772-56864791 None:intergenic 30.0%
AGGATAAGTAGAAGAAAAGT+TGG + chr8_3:56864780-56864799 None:intergenic 30.0%
! AACTTTTCTTCTACTTATCC+TGG - chr8_3:56864779-56864798 Msa1296960:intron 30.0%
! ACTTTTCTTCTACTTATCCT+GGG - chr8_3:56864780-56864799 Msa1296960:intron 30.0%
!!! CTTAGTTTTAGAAGCAACTT+AGG - chr8_3:56864905-56864924 Msa1296960:intron 30.0%
! GTTCTGTGCTTTCATAATTT+TGG - chr8_3:56865078-56865097 Msa1296960:intron 30.0%
CCCAATATTGTATTTGTAAC+AGG - chr8_3:56865153-56865172 Msa1296960:intron 30.0%
GCCTGTTACAAATACAATAT+TGG + chr8_3:56865157-56865176 None:intergenic 30.0%
! ATTTGTGTTTGGTCTTCATT+TGG - chr8_3:56865428-56865447 Msa1296960:intron 30.0%
! TTTGTGTTTGGTCTTCATTT+GGG - chr8_3:56865429-56865448 Msa1296960:intron 30.0%
AAAGAGGAAAAATCCAAACA+AGG + chr8_3:56865519-56865538 None:intergenic 30.0%
GTGCAATGATCTAATAAACA+GGG + chr8_3:56865589-56865608 None:intergenic 30.0%
AGTGCAATGATCTAATAAAC+AGG + chr8_3:56865590-56865609 None:intergenic 30.0%
TTCTCGAAGTAATTGTAGTT+AGG - chr8_3:56865665-56865684 Msa1296960:intron 30.0%
!!! CCTTAAAGCATTTTGAAACA+CGG + chr8_3:56865729-56865748 None:intergenic 30.0%
CGTGTTTCAAAATGCTTTAA+GGG - chr8_3:56865727-56865746 Msa1296960:intron 30.0%
! TTTTTACTTCTAATAGTGGC+GGG + chr8_3:56865859-56865878 None:intergenic 30.0%
AAACACTTGTATGGTAAGAA+GGG + chr8_3:56866099-56866118 None:intergenic 30.0%
AATTGGATTGAAGTATGGAT+GGG + chr8_3:56866173-56866192 None:intergenic 30.0%
TAATTGGATTGAAGTATGGA+TGG + chr8_3:56866174-56866193 None:intergenic 30.0%
CTTCAATCCAATTAGAAATG+TGG - chr8_3:56866180-56866199 Msa1296960:CDS 30.0%
CTACTTTCCACATTTCTAAT+TGG + chr8_3:56866190-56866209 None:intergenic 30.0%
ATAACAAAATCGGAAACCAA+AGG + chr8_3:56866370-56866389 None:intergenic 30.0%
!!! GGTTTCCGATTTTGTTATTT+TGG - chr8_3:56866372-56866391 Msa1296960:CDS 30.0%
!!! TTCCGATTTTGTTATTTTGG+TGG - chr8_3:56866375-56866394 Msa1296960:CDS 30.0%
!!! GTTATTTTGGTGGAAATTTC+AGG - chr8_3:56866385-56866404 Msa1296960:CDS 30.0%
TCGTAATCCCAATATTCCTT+AGG + chr8_3:56860186-56860205 None:intergenic 35.0%
TTATTATTACCCCCACTGAA+CGG + chr8_3:56860217-56860236 None:intergenic 35.0%
!! CTAGGGTATTGTTGTTGATT+TGG - chr8_3:56860307-56860326 Msa1296960:intron 35.0%
CAAACCTGTTAAGAAGAAGA+AGG - chr8_3:56860466-56860485 Msa1296960:intron 35.0%
ATCACCTTCTTCTTCTTAAC+AGG + chr8_3:56860473-56860492 None:intergenic 35.0%
TATGATAACCCCTTTCACTA+GGG + chr8_3:56860702-56860721 None:intergenic 35.0%
TTATGATAACCCCTTTCACT+AGG + chr8_3:56860703-56860722 None:intergenic 35.0%
TCATGATGTTAGGAACGAAT+TGG + chr8_3:56860969-56860988 None:intergenic 35.0%
! TTTTAACCAGCCATCCATTA+CGG - chr8_3:56861005-56861024 Msa1296960:intron 35.0%
! TGTGTATAATCCGTAATGGA+TGG + chr8_3:56861018-56861037 None:intergenic 35.0%
! TTTTTGATGTCGTTCAATGG+TGG + chr8_3:56861219-56861238 None:intergenic 35.0%
AGAATCATAGAGAACAGAGA+AGG - chr8_3:56861314-56861333 Msa1296960:CDS 35.0%
CATAATAATTGGGGAAAGAG+AGG - chr8_3:56861382-56861401 Msa1296960:intron 35.0%
TAAGGAACACAGATAGAGAA+TGG - chr8_3:56861407-56861426 Msa1296960:intron 35.0%
! GAAGGATAATTTGCCAAAAG+TGG - chr8_3:56861448-56861467 Msa1296960:intron 35.0%
!!! GATTTTACATCTGCCACTTT+TGG + chr8_3:56861464-56861483 None:intergenic 35.0%
!! AGCTCTTTTGAGTGTTATAC+TGG - chr8_3:56861498-56861517 Msa1296960:intron 35.0%
!! AGGTCTTTTGAGTGTTATAC+TGG - chr8_3:56861548-56861567 Msa1296960:intron 35.0%
TTATCATCAAGTTACCATGG+TGG + chr8_3:56861615-56861634 None:intergenic 35.0%
! AACAGTCTTATCCCATATGA+TGG + chr8_3:56861667-56861686 None:intergenic 35.0%
AGAATGAAGATGCATAAGCA+TGG + chr8_3:56861715-56861734 None:intergenic 35.0%
GAAAATAGAAAATGTCGTGC+TGG - chr8_3:56861776-56861795 Msa1296960:CDS 35.0%
ATATCATAGTCTGACAGTGT+AGG + chr8_3:56862227-56862246 None:intergenic 35.0%
ACAAGCAATTTCAAGCGAAA+AGG + chr8_3:56862659-56862678 None:intergenic 35.0%
! ATGAAGTTTTCTGATCAGGA+TGG - chr8_3:56862686-56862705 Msa1296960:intron 35.0%
!! AGTTTCATTGACTTGTTGTC+TGG - chr8_3:56862812-56862831 Msa1296960:intron 35.0%
GAGTCATATACATAATGAGC+TGG + chr8_3:56862877-56862896 None:intergenic 35.0%
!! CTAGCCAAAACTTTAGAGTT+TGG + chr8_3:56862999-56863018 None:intergenic 35.0%
ATGCTAAGAATGAAACCTAC+AGG + chr8_3:56863085-56863104 None:intergenic 35.0%
TAGCCACAAAAAACTGGAAA+TGG + chr8_3:56863216-56863235 None:intergenic 35.0%
TAAGCTTCGCCTTATAGATT+GGG - chr8_3:56863350-56863369 Msa1296960:intron 35.0%
GAAGGAATATAATGTTCGTG+TGG - chr8_3:56863398-56863417 Msa1296960:intron 35.0%
CAACCTTTCTATCTGCAATT+AGG - chr8_3:56863585-56863604 Msa1296960:intron 35.0%
AAGCCTAATTGCAGATAGAA+AGG + chr8_3:56863591-56863610 None:intergenic 35.0%
TTTCTATCTGCAATTAGGCT+TGG - chr8_3:56863590-56863609 Msa1296960:intron 35.0%
! GGCTTGGTTATACATATACT+TGG - chr8_3:56863606-56863625 Msa1296960:intron 35.0%
TTGAAGGTTAAGTTTATGGG+GGG - chr8_3:56863658-56863677 Msa1296960:intron 35.0%
TGAAGTGATAAGGAAGTCAT+TGG - chr8_3:56863695-56863714 Msa1296960:intron 35.0%
! TGGGAAGATTTTTGTACAGA+GGG - chr8_3:56863938-56863957 Msa1296960:intron 35.0%
TCCAAAATCAATACTGTACG+TGG - chr8_3:56863985-56864004 Msa1296960:intron 35.0%
!!! ACCACGTACAGTATTGATTT+TGG + chr8_3:56863989-56864008 None:intergenic 35.0%
TGATGGCATAAGGATGTTTA+TGG + chr8_3:56864035-56864054 None:intergenic 35.0%
CATTGTAATCTGATGGCATA+AGG + chr8_3:56864045-56864064 None:intergenic 35.0%
GGAGACTTCAAATTTCACAT+TGG + chr8_3:56864452-56864471 None:intergenic 35.0%
ATATCTGTAACAACACACAC+AGG + chr8_3:56864486-56864505 None:intergenic 35.0%
! GTGTGTTGTTACAGATATTC+CGG - chr8_3:56864488-56864507 Msa1296960:intron 35.0%
TCACGATAACTATGATCAAC+TGG - chr8_3:56864531-56864550 Msa1296960:intron 35.0%
ACATAATCAAGTTCCCAATG+TGG + chr8_3:56864686-56864705 None:intergenic 35.0%
!!! CATGTATCTTGTTTTTCTGC+TGG - chr8_3:56864723-56864742 Msa1296960:intron 35.0%
GTAGAAGAAAAGTTGGAAAC+AGG + chr8_3:56864773-56864792 None:intergenic 35.0%
TTCTTCATGCAATAGGTACT+TGG - chr8_3:56864976-56864995 Msa1296960:intron 35.0%
TCTTCATGCAATAGGTACTT+GGG - chr8_3:56864977-56864996 Msa1296960:intron 35.0%
! GAATAAGTATCGCATTGAGT+TGG - chr8_3:56865023-56865042 Msa1296960:intron 35.0%
! CAATAAGTGCTGCAAAATGT+GGG + chr8_3:56865050-56865069 None:intergenic 35.0%
! CACATTTTGCAGCACTTATT+GGG - chr8_3:56865049-56865068 Msa1296960:intron 35.0%
ACATTAATGAACCTTTGCCA+TGG + chr8_3:56865191-56865210 None:intergenic 35.0%
ACTATAATGCATACTACCTC+AGG + chr8_3:56865236-56865255 None:intergenic 35.0%
! AGTATTTTCATTGCTGCACT+TGG - chr8_3:56865400-56865419 Msa1296960:intron 35.0%
! GTATTTTCATTGCTGCACTT+GGG - chr8_3:56865401-56865420 Msa1296960:intron 35.0%
! TTGTGTTTGGTCTTCATTTG+GGG - chr8_3:56865430-56865449 Msa1296960:intron 35.0%
ATGTATCTGACCGAAATTGA+TGG - chr8_3:56865618-56865637 Msa1296960:intron 35.0%
AGTAATTGTAGTTAGGACCT+AGG - chr8_3:56865672-56865691 Msa1296960:intron 35.0%
CCGTGTTTCAAAATGCTTTA+AGG - chr8_3:56865726-56865745 Msa1296960:intron 35.0%
CATTGAATAACCGATGTATC+TGG - chr8_3:56865894-56865913 Msa1296960:CDS 35.0%
CAAACACTTGTATGGTAAGA+AGG + chr8_3:56866100-56866119 None:intergenic 35.0%
CTTCTTACCATACAAGTGTT+TGG - chr8_3:56866098-56866117 Msa1296960:intron 35.0%
ATGAGTACCAAACACTTGTA+TGG + chr8_3:56866108-56866127 None:intergenic 35.0%
!! CTGATGCTTGTTGTGATATA+TGG - chr8_3:56866233-56866252 Msa1296960:CDS 35.0%
! TTTATGGTGGAACTTGCATT+TGG - chr8_3:56866289-56866308 Msa1296960:CDS 35.0%
! TTATGGTGGAACTTGCATTT+GGG - chr8_3:56866290-56866309 Msa1296960:CDS 35.0%
TCGTTCGTCCTAAGGAATAT+TGG - chr8_3:56860175-56860194 Msa1296960:intron 40.0%
CGTTCGTCCTAAGGAATATT+GGG - chr8_3:56860176-56860195 Msa1296960:intron 40.0%
AAGATGATTATGAGGTGGTG+AGG - chr8_3:56860363-56860382 Msa1296960:intron 40.0%
CTCATAAATGGATGTGCACA+AGG - chr8_3:56860653-56860672 Msa1296960:intron 40.0%
TCAGTTACATCCCTAGTGAA+AGG - chr8_3:56860689-56860708 Msa1296960:intron 40.0%
CAGTTACATCCCTAGTGAAA+GGG - chr8_3:56860690-56860709 Msa1296960:intron 40.0%
AGTTACATCCCTAGTGAAAG+GGG - chr8_3:56860691-56860710 Msa1296960:intron 40.0%
! TTTCATACATTGGGTGCTGT+TGG - chr8_3:56860767-56860786 Msa1296960:intron 40.0%
!! ATTCTCCTCGGTGCTAATTT+GGG - chr8_3:56860839-56860858 Msa1296960:intron 40.0%
!! TATAATCCGTAATGGATGGC+TGG + chr8_3:56861014-56861033 None:intergenic 40.0%
TTGAGAGAACCTAGAAGACT+AGG - chr8_3:56861243-56861262 Msa1296960:intron 40.0%
CATAGAGAACAGAGAAGGAA+AGG - chr8_3:56861319-56861338 Msa1296960:CDS 40.0%
ATTGGGGAAAGAGAGGATTA+AGG - chr8_3:56861389-56861408 Msa1296960:intron 40.0%
AGCCCATTCAATTTCAGAGA+AGG - chr8_3:56861430-56861449 Msa1296960:intron 40.0%
ATGGGATAAGACTGTTAGTG+AGG - chr8_3:56861671-56861690 Msa1296960:intron 40.0%
! CACAGATTGAAGTGTTACAG+TGG + chr8_3:56861741-56861760 None:intergenic 40.0%
CACTGTAACACTTCAATCTG+TGG - chr8_3:56861739-56861758 Msa1296960:intron 40.0%
ATGTATGATACAGTGGCAGA+AGG - chr8_3:56861960-56861979 Msa1296960:intron 40.0%
TGTATGATACAGTGGCAGAA+GGG - chr8_3:56861961-56861980 Msa1296960:intron 40.0%
TCTTGAGCACAACAAGATCA+AGG + chr8_3:56862356-56862375 None:intergenic 40.0%
!!! TTGGTTGGTATTTTTGGACC+TGG - chr8_3:56862528-56862547 Msa1296960:intron 40.0%
!! ATTTTTGGACCTGGTATCTC+AGG - chr8_3:56862537-56862556 Msa1296960:intron 40.0%
GTTATAGAACTCTGCTGCAT+AGG - chr8_3:56862568-56862587 Msa1296960:intron 40.0%
CAAGACAATGTGATATGCCT+TGG + chr8_3:56862606-56862625 None:intergenic 40.0%
AAAACTGGAAATGGCAGGAT+TGG + chr8_3:56863207-56863226 None:intergenic 40.0%
CACAAAAAACTGGAAATGGC+AGG + chr8_3:56863212-56863231 None:intergenic 40.0%
!!! CTGCCATTTCCAGTTTTTTG+TGG - chr8_3:56863210-56863229 Msa1296960:intron 40.0%
TTGAAACTTCTACCAGGCAT+TGG - chr8_3:56863254-56863273 Msa1296960:intron 40.0%
AATGGCAATAATCCAATGCC+TGG + chr8_3:56863269-56863288 None:intergenic 40.0%
TTGGATTATTGCCATTCGCA+AGG - chr8_3:56863273-56863292 Msa1296960:intron 40.0%
TGGATTATTGCCATTCGCAA+GGG - chr8_3:56863274-56863293 Msa1296960:intron 40.0%
ATTCGCAAGGGATTATGCAT+CGG - chr8_3:56863286-56863305 Msa1296960:intron 40.0%
GTAAGCTTCGCCTTATAGAT+TGG - chr8_3:56863349-56863368 Msa1296960:intron 40.0%
AAGCTTCGCCTTATAGATTG+GGG - chr8_3:56863351-56863370 Msa1296960:intron 40.0%
TTGCAGAGTTCTATCATCCT+GGG - chr8_3:56863376-56863395 Msa1296960:intron 40.0%
CGAACATTATATTCCTTCCC+AGG + chr8_3:56863396-56863415 None:intergenic 40.0%
ATAATGTTCGTGTGGCTTCA+AGG - chr8_3:56863406-56863425 Msa1296960:intron 40.0%
AGTTAGGACATTGGGTGATA+CGG - chr8_3:56863486-56863505 Msa1296960:intron 40.0%
TTTATGGGGGGAAGGATATA+AGG - chr8_3:56863670-56863689 Msa1296960:intron 40.0%
! CTGGGAAGATTTTTGTACAG+AGG - chr8_3:56863937-56863956 Msa1296960:intron 40.0%
! GGGAAGATTTTTGTACAGAG+GGG - chr8_3:56863939-56863958 Msa1296960:intron 40.0%
! GGAAGATTTTTGTACAGAGG+GGG - chr8_3:56863940-56863959 Msa1296960:intron 40.0%
TGGCATAAGGATGTTTATGG+AGG + chr8_3:56864032-56864051 None:intergenic 40.0%
GAAGATCAACAAGAAGCTCT+GGG + chr8_3:56864244-56864263 None:intergenic 40.0%
TGAAGATCAACAAGAAGCTC+TGG + chr8_3:56864245-56864264 None:intergenic 40.0%
TCTCTAGATTTGTGGAGTCT+TGG - chr8_3:56864278-56864297 Msa1296960:intron 40.0%
AGTCTTGGTTGTATGTTTGC+CGG - chr8_3:56864293-56864312 Msa1296960:intron 40.0%
!! AAATTTGCTGCTTACCATCC+CGG + chr8_3:56864315-56864334 None:intergenic 40.0%
TGCTGTAGTTGAGGATTCTA+AGG + chr8_3:56864403-56864422 None:intergenic 40.0%
GATATGTCATGCTGTAGTTG+AGG + chr8_3:56864412-56864431 None:intergenic 40.0%
GTTGTTACAGATATTCCGGA+AGG - chr8_3:56864492-56864511 Msa1296960:intron 40.0%
ACACACATAACCCAACAATC+TGG + chr8_3:56864604-56864623 None:intergenic 40.0%
ATTGTTGGGTTATGTGTGTG+TGG - chr8_3:56864605-56864624 Msa1296960:intron 40.0%
TTGTTGGGTTATGTGTGTGT+GGG - chr8_3:56864606-56864625 Msa1296960:intron 40.0%
AAAAGTTGGAAACAGGGCAA+AGG + chr8_3:56864766-56864785 None:intergenic 40.0%
! CCAATAAGTGCTGCAAAATG+TGG + chr8_3:56865051-56865070 None:intergenic 40.0%
! CCACATTTTGCAGCACTTAT+TGG - chr8_3:56865048-56865067 Msa1296960:intron 40.0%
! ATTTTGCAGCACTTATTGGG+AGG - chr8_3:56865052-56865071 Msa1296960:intron 40.0%
GTATTTGTAACAGGCATAGC+AGG - chr8_3:56865162-56865181 Msa1296960:intron 40.0%
TACGATACGATCACCAAGAA+CGG - chr8_3:56865338-56865357 Msa1296960:intron 40.0%
AAAAGATTGGGCTGTTACCA+TGG + chr8_3:56865380-56865399 None:intergenic 40.0%
!! ACTTGGGCTTGATTTGTGTT+TGG - chr8_3:56865417-56865436 Msa1296960:intron 40.0%
! TCTGTTAATCCTGCCTTGTT+TGG - chr8_3:56865503-56865522 Msa1296960:intron 40.0%
AGGAAAAATCCAAACAAGGC+AGG + chr8_3:56865515-56865534 None:intergenic 40.0%
! TTGTATGGTAAGAAGGGCAT+TGG + chr8_3:56866093-56866112 None:intergenic 40.0%
ATCGGAAACCAAAGGCAATA+GGG + chr8_3:56866362-56866381 None:intergenic 40.0%
AATCGGAAACCAAAGGCAAT+AGG + chr8_3:56866363-56866382 None:intergenic 40.0%
! TATCGCGCGACAAGTTGAAT+TGG + chr8_3:56859906-56859925 None:intergenic 45.0%
ATCAGCATAAACCCTAGCCT+TGG + chr8_3:56860148-56860167 None:intergenic 45.0%
CAGGGAGCAAGATGATTATG+AGG - chr8_3:56860355-56860374 Msa1296960:intron 45.0%
GGAGCAAGATGATTATGAGG+TGG - chr8_3:56860358-56860377 Msa1296960:intron 45.0%
TTATGAGGTGGTGAGGAAAG+TGG - chr8_3:56860370-56860389 Msa1296960:intron 45.0%
TATGAGGTGGTGAGGAAAGT+GGG - chr8_3:56860371-56860390 Msa1296960:intron 45.0%
! AACCGACACTTTTGTGTCAC+CGG - chr8_3:56860527-56860546 Msa1296960:intron 45.0%
GAATCAAACCTGAGACCTTG+AGG + chr8_3:56860823-56860842 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCCT+CGG - chr8_3:56860827-56860846 Msa1296960:intron 45.0%
!! GATTCTCCTCGGTGCTAATT+TGG - chr8_3:56860838-56860857 Msa1296960:intron 45.0%
! AGTACAGCTCCTAGTCTTCT+AGG + chr8_3:56861255-56861274 None:intergenic 45.0%
CATGGTGGCATGGTGAAATT+AGG + chr8_3:56861600-56861619 None:intergenic 45.0%
CTAATTTCACCATGCCACCA+TGG - chr8_3:56861598-56861617 Msa1296960:intron 45.0%
ATCAAGTTACCATGGTGGCA+TGG + chr8_3:56861610-56861629 None:intergenic 45.0%
TAACACTATGGCCCATTGCA+CGG + chr8_3:56861896-56861915 None:intergenic 45.0%
GATGCATAATCCCTTGCGAA+TGG + chr8_3:56863287-56863306 None:intergenic 45.0%
TTCGCAAGGGATTATGCATC+GGG - chr8_3:56863287-56863306 Msa1296960:intron 45.0%
AGCTTCGCCTTATAGATTGG+GGG - chr8_3:56863352-56863371 Msa1296960:intron 45.0%
CTTGCAGAGTTCTATCATCC+TGG - chr8_3:56863375-56863394 Msa1296960:intron 45.0%
AGAGTTCTATCATCCTGGGA+AGG - chr8_3:56863380-56863399 Msa1296960:intron 45.0%
TTTATAGGCGCTCACAATGC+AGG - chr8_3:56863459-56863478 Msa1296960:intron 45.0%
TCACAATGCAGGTAGGAGTT+AGG - chr8_3:56863470-56863489 Msa1296960:intron 45.0%
CAGGTAGGAGTTAGGACATT+GGG - chr8_3:56863478-56863497 Msa1296960:intron 45.0%
GTTAGGACATTGGGTGATAC+GGG - chr8_3:56863487-56863506 Msa1296960:intron 45.0%
AGGTTAAGTTTATGGGGGGA+AGG - chr8_3:56863662-56863681 Msa1296960:intron 45.0%
AGTGAGGGAGTTGAACATCT+TGG + chr8_3:56863785-56863804 None:intergenic 45.0%
GTCTTGGTTGTATGTTTGCC+GGG - chr8_3:56864294-56864313 Msa1296960:intron 45.0%
CACACACAGGTAAGTGAAGT+AGG + chr8_3:56864473-56864492 None:intergenic 45.0%
CATAAAAGAACGGCTCCTTC+CGG + chr8_3:56864510-56864529 None:intergenic 45.0%
ATCAACTGGTCAAGATAGCC+AGG - chr8_3:56864545-56864564 Msa1296960:intron 45.0%
TCAACTGGTCAAGATAGCCA+GGG - chr8_3:56864546-56864565 Msa1296960:intron 45.0%
TTCACATGCTACACTTACCC+TGG + chr8_3:56864566-56864585 None:intergenic 45.0%
GGTAAGTGTAGCATGTGAAG+TGG - chr8_3:56864567-56864586 Msa1296960:intron 45.0%
!! GATTGCTGCTTTCACAGTCA+CGG + chr8_3:56864850-56864869 None:intergenic 45.0%
CATGCAATAGGTACTTGGGA+CGG - chr8_3:56864981-56865000 Msa1296960:intron 45.0%
TCAACACTTGACTGTTCCTG+AGG - chr8_3:56865217-56865236 Msa1296960:intron 45.0%
! ACCATGGCTTCTTTTGCAGT+GGG + chr8_3:56865364-56865383 None:intergenic 45.0%
! TACCATGGCTTCTTTTGCAG+TGG + chr8_3:56865365-56865384 None:intergenic 45.0%
! TACTTCTAATAGTGGCGGGA+GGG + chr8_3:56865855-56865874 None:intergenic 45.0%
! TTACTTCTAATAGTGGCGGG+AGG + chr8_3:56865856-56865875 None:intergenic 45.0%
TTCTCTTGCCCTATTGCCTT+TGG - chr8_3:56866351-56866370 Msa1296960:CDS 45.0%
!!! ATTTTTTTTTAAAAATCTAA+AGG + chr8_3:56866026-56866045 None:intergenic 5.0%
CAACTTGTCGCGCGATAGAT+TGG - chr8_3:56859909-56859928 Msa1296960:three_prime_UTR 50.0%
AAATGGTTGTTCGGCGGTGA+CGG + chr8_3:56860039-56860058 None:intergenic 50.0%
AATTTCTGCGCCATGTCGAC+GGG + chr8_3:56860093-56860112 None:intergenic 50.0%
GAATTTCTGCGCCATGTCGA+CGG + chr8_3:56860094-56860113 None:intergenic 50.0%
GTCGACATGGCGCAGAAATT+CGG - chr8_3:56860093-56860112 Msa1296960:exon 50.0%
TGTCAACGTCGTTCGTCCTA+AGG - chr8_3:56860167-56860186 Msa1296960:intron 50.0%
!! TGAAGCATCGAAACAGACGC+CGG + chr8_3:56860549-56860568 None:intergenic 50.0%
!! GGTGCTGTTGGTGTTGACTT+GGG - chr8_3:56860779-56860798 Msa1296960:intron 50.0%
!! TTGGTGTTGACTTGGGACCT+TGG - chr8_3:56860786-56860805 Msa1296960:intron 50.0%
TTGAGGAGGATCACACTCCA+AGG + chr8_3:56860806-56860825 None:intergenic 50.0%
TTGGAGTGTGATCCTCCTCA+AGG - chr8_3:56860805-56860824 Msa1296960:intron 50.0%
TCAAACCTGAGACCTTGAGG+AGG + chr8_3:56860820-56860839 None:intergenic 50.0%
!! TCCTCGGTGCTAATTTGGGT+GGG - chr8_3:56860843-56860862 Msa1296960:intron 50.0%
! GGAAAGGTGCAAATAGCTGC+AGG - chr8_3:56861335-56861354 Msa1296960:intron 50.0%
TGGATGTCAACACCGTGCAA+TGG - chr8_3:56861881-56861900 Msa1296960:intron 50.0%
GGATGTCAACACCGTGCAAT+GGG - chr8_3:56861882-56861901 Msa1296960:intron 50.0%
TTGGACCTGGTATCTCAGGA+AGG - chr8_3:56862541-56862560 Msa1296960:intron 50.0%
TGGACCTGGTATCTCAGGAA+GGG - chr8_3:56862542-56862561 Msa1296960:intron 50.0%
ATAGGTGCTCTTGCGATCCA+AGG - chr8_3:56862586-56862605 Msa1296960:intron 50.0%
CTGCAAGCCCCCAATCTATA+AGG + chr8_3:56863362-56863381 None:intergenic 50.0%
GCAGGTAGGAGTTAGGACAT+TGG - chr8_3:56863477-56863496 Msa1296960:intron 50.0%
TGGTTGTATGTTTGCCGGGA+TGG - chr8_3:56864298-56864317 Msa1296960:intron 50.0%
! CGGAAGGAGCCGTTCTTTTA+TGG - chr8_3:56864508-56864527 Msa1296960:intron 50.0%
TTGCAACTGCGCCAGATTGT+TGG - chr8_3:56864590-56864609 Msa1296960:intron 50.0%
TGCAACTGCGCCAGATTGTT+GGG - chr8_3:56864591-56864610 Msa1296960:intron 50.0%
ATAGCAGGAAGCCATGGCAA+AGG - chr8_3:56865177-56865196 Msa1296960:intron 50.0%
! TGGTCTTCATTTGGGGCCTT+CGG - chr8_3:56865437-56865456 Msa1296960:intron 50.0%
ATGCCAGATAAGAAGCCCGA+AGG + chr8_3:56865456-56865475 None:intergenic 50.0%
CGGGCTTCTTATCTGGCATT+TGG - chr8_3:56865457-56865476 Msa1296960:intron 50.0%
ACGGAGTTGTTGAGGAGGAG+CGG + chr8_3:56860020-56860039 None:intergenic 55.0%
GGACGGCGGAAATGGTTGTT+CGG + chr8_3:56860048-56860067 None:intergenic 55.0%
ACGAAACCCTCACCGTTCAG+TGG - chr8_3:56860202-56860221 Msa1296960:intron 55.0%
CGAAACCCTCACCGTTCAGT+GGG - chr8_3:56860203-56860222 Msa1296960:intron 55.0%
GAAACCCTCACCGTTCAGTG+GGG - chr8_3:56860204-56860223 Msa1296960:intron 55.0%
AAACCCTCACCGTTCAGTGG+GGG - chr8_3:56860205-56860224 Msa1296960:intron 55.0%
TTACCCCCACTGAACGGTGA+GGG + chr8_3:56860211-56860230 None:intergenic 55.0%
ATTACCCCCACTGAACGGTG+AGG + chr8_3:56860212-56860231 None:intergenic 55.0%
AGGTGGTGAGGAAAGTGGGA+AGG - chr8_3:56860375-56860394 Msa1296960:intron 55.0%
GGTGGTGAGGAAAGTGGGAA+GGG - chr8_3:56860376-56860395 Msa1296960:intron 55.0%
GTGGTGAGGAAAGTGGGAAG+GGG - chr8_3:56860377-56860396 Msa1296960:intron 55.0%
TGGTGAGGAAAGTGGGAAGG+GGG - chr8_3:56860378-56860397 Msa1296960:intron 55.0%
GGGAAGGGGGAAATACAGTG+AGG - chr8_3:56860391-56860410 Msa1296960:intron 55.0%
! CGCCGGTGACACAAAAGTGT+CGG + chr8_3:56860532-56860551 None:intergenic 55.0%
!! GGGTGCTGTTGGTGTTGACT+TGG - chr8_3:56860778-56860797 Msa1296960:intron 55.0%
GTGATCCTCCTCAAGGTCTC+AGG - chr8_3:56860812-56860831 Msa1296960:intron 55.0%
!! CTCCTCGGTGCTAATTTGGG+TGG - chr8_3:56860842-56860861 Msa1296960:intron 55.0%
CAAGCCCTTCCTGAGATACC+AGG + chr8_3:56862549-56862568 None:intergenic 55.0%
CGTCTCTTCATGCGTCCTGT+AGG - chr8_3:56863067-56863086 Msa1296960:intron 55.0%
TAGGCGCTCACAATGCAGGT+AGG - chr8_3:56863463-56863482 Msa1296960:intron 55.0%
CATTGGGTGATACGGGTGCT+TGG - chr8_3:56863494-56863513 Msa1296960:intron 55.0%
AGTAAGCTGTGTGGTCTCCC+AGG + chr8_3:56864800-56864819 None:intergenic 55.0%
ACAGGCATAGCAGGAAGCCA+TGG - chr8_3:56865171-56865190 Msa1296960:intron 55.0%
! CTTTTGCAGTGGGCCGTTCT+TGG + chr8_3:56865354-56865373 None:intergenic 55.0%
GCCCACTGCAAAAGAAGCCA+TGG - chr8_3:56865360-56865379 Msa1296960:intron 55.0%
! GGTCTTCATTTGGGGCCTTC+GGG - chr8_3:56865438-56865457 Msa1296960:intron 55.0%
GAGTTGTTGAGGAGGAGCGG+CGG + chr8_3:56860017-56860036 None:intergenic 60.0%
!! CGGTGACGGAGTTGTTGAGG+AGG + chr8_3:56860025-56860044 None:intergenic 60.0%
CGGCGGAAATGGTTGTTCGG+CGG + chr8_3:56860045-56860064 None:intergenic 60.0%
ACAACCATTTCCGCCGTCCG+CGG - chr8_3:56860049-56860068 Msa1296960:three_prime_UTR 60.0%
GCCCACCCAAATTAGCACCG+AGG + chr8_3:56860847-56860866 None:intergenic 60.0%
GACTTGGGGTCTTCGACTGC+TGG + chr8_3:56862160-56862179 None:intergenic 60.0%
GGCGAAGCTTACGCTGCTCA+TGG + chr8_3:56863341-56863360 None:intergenic 60.0%
GGTGATACGGGTGCTTGGCA+AGG - chr8_3:56863499-56863518 Msa1296960:intron 60.0%
GATACGGGTGCTTGGCAAGG+TGG - chr8_3:56863502-56863521 Msa1296960:intron 60.0%
GGGCCTTCGGGCTTCTTATC+TGG - chr8_3:56865450-56865469 Msa1296960:intron 60.0%
TTGTTGAGGAGGAGCGGCGG+AGG + chr8_3:56860014-56860033 None:intergenic 65.0%
!! CGGCGGTGACGGAGTTGTTG+AGG + chr8_3:56860028-56860047 None:intergenic 65.0%
ATGTCGACGGGTGGACGAGG+AGG + chr8_3:56860081-56860100 None:intergenic 65.0%
TCCTCGTCCACCCGTCGACA+TGG - chr8_3:56860080-56860099 Msa1296960:three_prime_UTR 65.0%
TTCTGCGCCATGTCGACGGG+TGG + chr8_3:56860090-56860109 None:intergenic 65.0%
GGAAAATCCACTCGCCGCCC+CGG - chr8_3:56860114-56860133 Msa1296960:CDS 65.0%
! TAGCCTTGGATGCAGCGCCG+GGG + chr8_3:56860134-56860153 None:intergenic 65.0%
!! CTAGCCTTGGATGCAGCGCC+GGG + chr8_3:56860135-56860154 None:intergenic 65.0%
!! CCTAGCCTTGGATGCAGCGC+CGG + chr8_3:56860136-56860155 None:intergenic 65.0%
CGGCGCTGCATCCAAGGCTA+GGG - chr8_3:56860134-56860153 Msa1296960:CDS 65.0%
ACGGGTGGACGAGGAGGAGG+AGG + chr8_3:56860075-56860094 None:intergenic 70.0%
TCGACGGGTGGACGAGGAGG+AGG + chr8_3:56860078-56860097 None:intergenic 70.0%
GCCATGTCGACGGGTGGACG+AGG + chr8_3:56860084-56860103 None:intergenic 70.0%
CCGGCGCTGCATCCAAGGCT+AGG - chr8_3:56860133-56860152 Msa1296960:CDS 70.0%
GAGGCCGCGGACGGCGGAAA+TGG + chr8_3:56860056-56860075 None:intergenic 75.0%
GAGGAGGAGGAGGCCGCGGA+CGG + chr8_3:56860065-56860084 None:intergenic 75.0%
GGACGAGGAGGAGGAGGCCG+CGG + chr8_3:56860069-56860088 None:intergenic 75.0%
! CCTTGGATGCAGCGCCGGGG+CGG + chr8_3:56860131-56860150 None:intergenic 75.0%
! GAGGAGGAGGCCGCGGACGG+CGG + chr8_3:56860062-56860081 None:intergenic 80.0%
! CCGCCCCGGCGCTGCATCCA+AGG - chr8_3:56860128-56860147 Msa1296960:CDS 80.0%
!! TGCAGCGCCGGGGCGGCGAG+TGG + chr8_3:56860124-56860143 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 56859748 56866583 56859748 ID=Msa1296960;Name=Msa1296960
chr8_3 mRNA 56859748 56866583 56859748 ID=Msa1296960-mRNA-1;Parent=Msa1296960;Name=Msa1296960-mRNA-1;_AED=0.15;_eAED=0.15;_QI=132|0.88|0.9|1|0.88|0.9|10|355|400
chr8_3 exon 56859748 56860162 56859748 ID=Msa1296960-mRNA-1:exon:16310;Parent=Msa1296960-mRNA-1
chr8_3 exon 56860950 56861018 56860950 ID=Msa1296960-mRNA-1:exon:16309;Parent=Msa1296960-mRNA-1
chr8_3 exon 56861093 56861156 56861093 ID=Msa1296960-mRNA-1:exon:16308;Parent=Msa1296960-mRNA-1
chr8_3 exon 56861258 56861340 56861258 ID=Msa1296960-mRNA-1:exon:16307;Parent=Msa1296960-mRNA-1
chr8_3 exon 56861764 56861829 56861764 ID=Msa1296960-mRNA-1:exon:16306;Parent=Msa1296960-mRNA-1
chr8_3 exon 56862012 56862102 56862012 ID=Msa1296960-mRNA-1:exon:16305;Parent=Msa1296960-mRNA-1
chr8_3 exon 56862904 56863061 56862904 ID=Msa1296960-mRNA-1:exon:16304;Parent=Msa1296960-mRNA-1
chr8_3 exon 56864117 56864251 56864117 ID=Msa1296960-mRNA-1:exon:16303;Parent=Msa1296960-mRNA-1
chr8_3 exon 56865844 56865973 56865844 ID=Msa1296960-mRNA-1:exon:16302;Parent=Msa1296960-mRNA-1
chr8_3 exon 56866105 56866583 56866105 ID=Msa1296960-mRNA-1:exon:16301;Parent=Msa1296960-mRNA-1
chr8_3 five_prime_UTR 56866452 56866583 56866452 ID=Msa1296960-mRNA-1:five_prime_utr;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56866105 56866451 56866105 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56865844 56865973 56865844 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56864117 56864251 56864117 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56862904 56863061 56862904 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56862012 56862102 56862012 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56861764 56861829 56861764 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56861258 56861340 56861258 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56861093 56861156 56861093 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56860950 56861018 56860950 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 CDS 56860103 56860162 56860103 ID=Msa1296960-mRNA-1:cds;Parent=Msa1296960-mRNA-1
chr8_3 three_prime_UTR 56859748 56860102 56859748 ID=Msa1296960-mRNA-1:three_prime_utr;Parent=Msa1296960-mRNA-1
Gene Sequence

>Msa1296960

ATGGCCGTAAAACATTTGCAATTCCAATTCAACTTGTCGCGCGATAGATTGGTCTTTCTCTTTCGAACATCTCAATCTCATTCTTTATTTCCTTATAATAATAAATTCCCCAAATCTTTTCTCTCTTTCTTCCTCCGCCGCTCCTCCTCAACAACTCCGTCACCGCCGAACAACCATTTCCGCCGTCCGCGGCCTCCTCCTCCTCGTCCACCCGTCGACATGGCGCAGAAATTCGGAAAATCCACTCGCCGCCCCGGCGCTGCATCCAAGGCTAGGGTTTATGCTGATGTCAACGTCGTTCGTCCTAAGGAATATTGGGATTACGAAACCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAAGTGGGAAGGGGGAAATACAGTGAGGTTTTTGAAGGTGTTCATTGTACTGATAATGAAAAATGTGTTATCAAGATTCTCAAACCTGTTAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCAAGTCTCATATTTGAATATGTCAACAACACTGATTTTAAAGCATTGGATTATTGCCATTCGCAAGGGATTATGCATCGGGATGTGAAGCCCCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAGGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGAGTCTTGGTTGTATGTTTGCCGGGATGATATTCCGGAAGGAGCCGTTCTTTTATGGTCACGATAACTATGATCAACTGGTCAAGATAGCCAGGGTACTTGGGACGGATGAATTAAATACATATTTGAATAAGTATCGCATTGAGTTGGACCCACATTTTGCAGCACTTATTGGGAGGCATAGCAGGAAGCCATGGCAAAGGTTCATTAATGTTGAAAATCAACACTTGACTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTACGATACGATCACCAAGAACGGCCCACTGCAAAAGAAGCCATGGCCCATCCATACTTCAATCCAATTAGAAATGTGGAAAGTAGCAGAGCTCGTGCACATTGA
Protein sequence

>Msa1296960

MAVKHLQFQFNLSRDRLVFLFRTSQSHSLFPYNNKFPKSFLSFFLRRSSSTTPSPPNNHFRRPRPPPPRPPVDMAQKFGKSTRRPGAASKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARVLGTDELNTYLNKYRIELDPHFAALIGRHSRKPWQRFINVENQHLTVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNVESSRARAH*