AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204980 MtrunA17_Chr4g0053951 94.048 420 4 2 1 400 1 419 0.0 809
Msa1204980 MtrunA17_Chr5g0401371 79.827 347 50 1 74 400 68 414 0.0 571
Msa1204980 MtrunA17_Chr4g0053821 75.623 361 64 2 64 400 28 388 0.0 532
Msa1204980 MtrunA17_Chr1g0187371 28.746 327 166 11 109 389 6 311 1.71e-37 138
Msa1204980 MtrunA17_Chr4g0002001 27.950 322 164 9 119 389 2 306 8.25e-36 133
Msa1204980 MtrunA17_Chr8g0350311 30.671 313 160 12 121 395 139 432 4.85e-35 134
Msa1204980 MtrunA17_Chr2g0293491 30.392 306 169 9 118 392 1 293 2.17e-34 129
Msa1204980 MtrunA17_Chr8g0358921 28.616 318 176 9 119 399 45 348 7.14e-33 126
Msa1204980 MtrunA17_Chr4g0051261 29.836 305 170 9 119 392 2 293 1.29e-32 124
Msa1204980 MtrunA17_Chr2g0320011 29.180 305 167 10 120 390 87 376 1.68e-32 127
Msa1204980 MtrunA17_Chr3g0131861 29.766 299 169 10 119 387 95 382 1.74e-32 128
Msa1204980 MtrunA17_Chr7g0273601 29.766 299 169 9 119 387 105 392 1.75e-32 128
Msa1204980 MtrunA17_Chr2g0284091 28.571 308 165 11 120 390 39 328 2.36e-32 125
Msa1204980 MtrunA17_Chr8g0387401 27.451 306 169 9 124 392 55 344 3.01e-32 125
Msa1204980 MtrunA17_Chr2g0277011 30.033 303 155 12 127 391 96 379 8.03e-32 125
Msa1204980 MtrunA17_Chr7g0270371 29.412 306 167 10 120 391 74 364 9.45e-32 124
Msa1204980 MtrunA17_Chr1g0194201 29.412 306 167 10 120 391 74 364 4.32e-31 122
Msa1204980 MtrunA17_Chr1g0191221 30.100 299 168 10 119 387 120 407 5.37e-31 124
Msa1204980 MtrunA17_Chr4g0061141 31.126 302 159 13 119 386 103 389 1.24e-30 124
Msa1204980 MtrunA17_Chr1g0193081 29.316 307 166 11 120 391 74 364 5.08e-30 119
Msa1204980 MtrunA17_Chr7g0218071 30.435 299 168 10 119 387 118 406 1.00e-29 121
Msa1204980 MtrunA17_Chr6g0453711 29.373 303 169 13 119 389 108 397 1.72e-29 120
Msa1204980 MtrunA17_Chr2g0317501 28.094 299 174 11 119 387 132 419 2.50e-29 120
Msa1204980 MtrunA17_Chr4g0045841 27.124 306 169 9 124 392 58 346 4.75e-29 116
Msa1204980 MtrunA17_Chr7g0246591 26.923 338 189 12 96 391 109 430 6.27e-29 117
Msa1204980 MtrunA17_Chr5g0397261 26.885 305 172 9 124 392 44 333 1.56e-28 115
Msa1204980 MtrunA17_Chr2g0286421 29.097 299 171 11 119 387 100 387 2.16e-28 116
Msa1204980 MtrunA17_Chr4g0066691 27.759 299 175 10 119 387 102 389 2.21e-28 116
Msa1204980 MtrunA17_Chr8g0348481 25.902 305 175 8 124 392 40 329 2.77e-28 114
Msa1204980 MtrunA17_Chr8g0385971 28.094 299 174 9 119 387 88 375 3.15e-28 116
Msa1204980 MtrunA17_Chr2g0324461 28.859 298 169 10 121 387 141 426 6.08e-28 115
Msa1204980 MtrunA17_Chr6g0483151 28.571 294 159 11 127 387 20 295 7.15e-28 114
Msa1204980 MtrunA17_Chr7g0248461 27.333 300 177 10 124 392 41 330 9.94e-28 112
Msa1204980 MtrunA17_Chr5g0409421 26.115 314 181 11 119 399 2 297 1.12e-27 114
Msa1204980 MtrunA17_Chr4g0030231 27.000 300 178 9 124 392 43 332 1.58e-27 112
Msa1204980 MtrunA17_Chr4g0030151 28.000 300 175 10 124 392 42 331 2.46e-27 111
Msa1204980 MtrunA17_Chr4g0040141 28.428 299 173 11 119 387 127 414 2.93e-27 114
Msa1204980 MtrunA17_Chr1g0201571 31.416 226 120 7 119 313 124 345 3.92e-27 113
Msa1204980 MtrunA17_Chr5g0396361 27.759 299 175 12 119 387 138 425 9.57e-27 112
Msa1204980 MtrunA17_Chr3g0141871 28.904 301 166 12 121 386 32 319 4.21e-26 108
Msa1204980 MtrunA17_Chr5g0443351 28.616 318 177 12 114 393 15 320 5.33e-26 109
Msa1204980 MtrunA17_Chr8g0378831 28.667 300 168 12 121 386 32 319 6.20e-26 107
Msa1204980 MtrunA17_Chr6g0482681 29.338 317 178 12 113 393 81 387 7.18e-26 109
Msa1204980 MtrunA17_Chr3g0099951 27.759 299 161 13 127 389 20 299 1.20e-25 107
Msa1204980 MtrunA17_Chr8g0383451 32.618 233 117 9 127 326 4 229 2.71e-25 107
Msa1204980 MtrunA17_Chr8g0359091 28.840 319 177 12 113 393 18 324 3.86e-25 107
Msa1204980 MtrunA17_Chr4g0065851 27.356 329 192 13 101 393 6 323 4.23e-25 107
Msa1204980 MtrunA17_Chr8g0369451 24.503 302 170 9 121 386 4 283 5.23e-25 106
Msa1204980 MtrunA17_Chr3g0096631 28.797 316 179 12 114 393 18 323 6.03e-25 107
Msa1204980 MtrunA17_Chr8g0392811 26.498 317 187 12 113 393 109 415 9.49e-25 106
Msa1204980 MtrunA17_Chr2g0287271 27.052 329 193 13 101 393 6 323 2.20e-24 105
Msa1204980 MtrunA17_Chr3g0102571 34.054 185 112 5 203 386 191 366 3.18e-24 103
Msa1204980 MtrunA17_Chr3g0122781 28.311 219 134 6 187 389 514 725 1.94e-23 102
Msa1204980 MtrunA17_Chr3g0130781 28.086 324 174 13 114 386 13 328 3.70e-23 100
Msa1204980 MtrunA17_Chr7g0274941 25.000 308 154 10 114 386 9 274 5.30e-23 98.2
Msa1204980 MtrunA17_Chr8g0339221 25.926 297 175 10 121 387 4 285 5.72e-23 100
Msa1204980 MtrunA17_Chr4g0057791 32.474 194 110 6 203 386 329 511 1.21e-22 99.8
Msa1204980 MtrunA17_Chr8g0377071 32.000 200 109 8 203 389 494 679 1.26e-22 100
Msa1204980 MtrunA17_Chr3g0093391 26.837 313 173 12 119 386 21 322 1.79e-22 99.4
Msa1204980 MtrunA17_Chr3g0127571 25.246 305 159 8 121 392 138 406 4.03e-22 98.6
Msa1204980 MtrunA17_Chr7g0256001 24.331 411 211 13 24 386 45 403 4.73e-22 98.2
Msa1204980 MtrunA17_Chr3g0093571 26.562 320 165 12 119 386 23 324 5.69e-22 97.8
Msa1204980 MtrunA17_Chr4g0059951 24.599 374 186 13 47 386 20 331 9.44e-21 94.4
Msa1204980 MtrunA17_Chr7g0276111 24.205 409 186 17 46 386 54 406 1.83e-20 93.6
Msa1204980 MtrunA17_Chr3g0102601 32.065 184 101 5 203 386 45 204 3.52e-20 89.4
Msa1204980 MtrunA17_Chr7g0257751 25.987 304 142 9 121 386 58 316 1.02e-19 90.9
Msa1204980 MtrunA17_Chr1g0190131 24.658 292 158 10 121 386 9 264 3.19e-19 87.0
Msa1204980 MtrunA17_Chr4g0030241 35.135 111 70 2 203 313 12 120 9.07e-19 83.6
Msa1204980 MtrunA17_Chr2g0314321 26.506 332 181 13 115 393 19 340 2.28e-18 87.0
Msa1204980 MtrunA17_Chr4g0074811 25.667 300 148 10 121 386 91 349 3.95e-18 86.3
Msa1204980 MtrunA17_Chr4g0074791 25.203 369 184 14 51 386 45 354 1.23e-17 84.7
Msa1204980 MtrunA17_Chr1g0157131 26.102 295 153 10 121 386 74 332 2.78e-17 83.6
Msa1204980 MtrunA17_Chr7g0267771 23.986 296 156 8 121 385 88 345 3.66e-17 83.2
Msa1204980 MtrunA17_Chr1g0176751 25.424 295 155 9 121 386 124 382 5.23e-17 82.8
Msa1204980 MtrunA17_Chr3g0116701 24.478 335 175 16 121 386 94 419 1.01e-16 81.6
Msa1204980 MtrunA17_Chr4g0008561 24.749 299 157 9 120 388 18 278 1.43e-16 81.6
Msa1204980 MtrunA17_Chr8g0385341 28.019 207 112 6 121 295 30 231 1.45e-16 81.3
Msa1204980 MtrunA17_Chr1g0170281 23.214 336 178 10 83 386 89 376 4.23e-16 80.1
Msa1204980 MtrunA17_Chr3g0130151 22.185 302 161 9 127 397 250 508 6.08e-16 79.7
Msa1204980 MtrunA17_Chr7g0242561 23.432 303 157 9 118 386 53 314 8.52e-16 79.0
Msa1204980 MtrunA17_Chr4g0001331 27.404 208 114 8 119 294 18 220 3.28e-15 77.0
Msa1204980 MtrunA17_Chr7g0267751 24.068 295 159 9 121 386 135 393 3.74e-15 77.4
Msa1204980 MtrunA17_Chr2g0286501 28.936 235 124 9 108 306 30 257 4.32e-15 77.4
Msa1204980 MtrunA17_Chr8g0351491 26.341 205 115 7 119 294 14 211 7.41e-15 74.3
Msa1204980 MtrunA17_Chr5g0432471 26.961 204 116 9 121 294 12 212 1.43e-14 75.1
Msa1204980 MtrunA17_Chr1g0205421 26.442 208 114 9 121 295 12 213 2.44e-14 74.3
Msa1204980 MtrunA17_Chr4g0063881 28.293 205 111 8 121 294 11 210 6.28e-14 73.2
Msa1204980 MtrunA17_Chr1g0190831 23.333 300 159 8 119 388 2 260 7.02e-14 73.2
Msa1204980 MtrunA17_Chr4g0013131 27.536 207 111 9 121 294 12 212 1.25e-13 72.4
Msa1204980 MtrunA17_Chr3g0140631 25.000 220 127 8 119 307 35 247 1.62e-13 70.9
Msa1204980 MtrunA17_Chr8g0346071 26.699 206 113 8 121 294 17 216 4.14e-13 70.5
Msa1204980 MtrunA17_Chr8g0390341 32.836 134 83 3 254 387 288 414 4.39e-13 70.5
Msa1204980 MtrunA17_Chr8g0353621 24.878 205 118 7 119 294 8 205 4.52e-13 68.9
Msa1204980 MtrunA17_Chr8g0346081 25.854 205 116 7 121 294 17 216 5.20e-13 70.1
Msa1204980 MtrunA17_Chr3g0107011 25.439 228 128 11 121 316 14 231 6.15e-13 70.1
Msa1204980 MtrunA17_Chr8g0345801 25.110 227 132 8 120 316 14 232 6.49e-13 68.6
Msa1204980 MtrunA17_Chr5g0441011 26.923 208 112 9 121 294 13 214 7.23e-13 69.7
Msa1204980 MtrunA17_Chr1g0150321 27.830 212 114 8 121 300 13 217 1.10e-12 69.3
Msa1204980 MtrunA17_Chr6g0486031 32.090 134 84 3 254 387 275 401 1.38e-12 68.9
Msa1204980 MtrunA17_Chr5g0419441 21.534 339 191 12 77 386 201 493 1.53e-12 69.3
Msa1204980 MtrunA17_Chr2g0284011 27.317 205 114 9 121 294 12 212 1.55e-12 68.9
Msa1204980 MtrunA17_Chr3g0139371 22.024 336 181 14 121 386 74 398 2.19e-12 68.2
Msa1204980 MtrunA17_Chr1g0170551 28.571 217 115 9 116 301 2 209 2.55e-12 68.9
Msa1204980 MtrunA17_Chr2g0333821 26.442 208 116 8 119 294 12 214 2.68e-12 68.2
Msa1204980 MtrunA17_Chr7g0244521 25.877 228 125 11 121 315 12 228 2.83e-12 68.2
Msa1204980 MtrunA17_Chr2g0284031 26.941 219 118 10 109 294 22 231 2.99e-12 68.2
Msa1204980 MtrunA17_Chr3g0132591 23.183 289 163 8 119 386 110 360 3.12e-12 67.8
Msa1204980 MtrunA17_Chr7g0272841 24.444 225 123 10 127 313 74 289 1.03e-11 66.6
Msa1204980 MtrunA17_Chr3g0114511 23.415 205 122 7 121 295 32 231 1.72e-11 65.5
Msa1204980 MtrunA17_Chr3g0125381 28.750 160 84 6 174 307 10 165 2.11e-11 63.2
Msa1204980 MtrunA17_Chr2g0304111 25.854 205 118 9 121 294 23 224 2.47e-11 65.1
Msa1204980 MtrunA17_Chr1g0166101 25.604 207 116 8 121 294 24 225 3.03e-11 64.7
Msa1204980 MtrunA17_Chr5g0402601 25.177 282 145 15 51 294 326 579 4.05e-11 64.7
Msa1204980 MtrunA17_Chr1g0210061 35.922 103 61 4 203 304 726 824 4.08e-11 65.1
Msa1204980 MtrunA17_Chr5g0432491 25.962 208 114 9 121 294 23 224 5.37e-11 63.9
Msa1204980 MtrunA17_Chr4g0074111 24.510 204 121 8 121 294 18 218 6.97e-11 63.5
Msa1204980 MtrunA17_Chr8g0379091 26.570 207 113 9 121 294 26 226 7.27e-11 63.9
Msa1204980 MtrunA17_Chr5g0444181 24.737 190 91 6 95 248 74 247 7.64e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204980 AT2G23070.1 85.756 344 29 1 74 397 85 428 0.0 578
Msa1204980 AT5G67380.1 79.042 334 50 1 87 400 76 409 0.0 523
Msa1204980 AT3G50000.1 79.518 332 48 1 89 400 72 403 0.0 522
Msa1204980 AT2G23080.1 77.039 331 56 1 89 399 2 332 7.25e-178 498
Msa1204980 AT5G67380.2 71.257 334 43 2 87 400 76 376 2.56e-174 491
Msa1204980 AT2G23080.2 77.778 297 46 1 89 365 2 298 8.51e-157 444
Msa1204980 AT2G38620.2 29.268 328 152 10 119 389 2 306 4.04e-37 137
Msa1204980 AT3G54180.1 28.834 326 154 10 119 389 2 304 5.92e-36 134
Msa1204980 AT1G20930.1 29.618 314 160 12 119 389 14 309 6.17e-36 134
Msa1204980 AT3G48750.1 30.464 302 166 10 119 389 2 290 1.33e-35 132
Msa1204980 AT1G76540.1 29.154 319 155 12 119 389 12 307 8.43e-35 131
Msa1204980 AT2G38620.4 30.216 278 152 8 119 389 2 244 1.57e-34 128
Msa1204980 AT4G00720.1 29.395 347 187 12 96 399 106 437 5.10e-34 132
Msa1204980 AT3G61160.1 29.126 309 170 10 121 395 102 395 3.67e-33 129
Msa1204980 AT3G61160.4 29.126 309 170 10 121 395 102 395 4.55e-33 129
Msa1204980 AT2G30980.1 30.164 305 164 10 120 390 71 360 5.94e-33 128
Msa1204980 AT3G61160.2 29.126 309 170 10 121 395 109 402 6.11e-33 128
Msa1204980 AT1G74330.3 29.610 385 191 17 67 387 40 408 7.49e-33 130
Msa1204980 AT5G14640.1 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa1204980 AT5G14640.2 30.065 306 165 10 120 391 73 363 7.71e-33 127
Msa1204980 AT1G06390.2 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa1204980 AT1G06390.1 29.836 305 165 10 120 390 69 358 8.22e-33 127
Msa1204980 AT1G74330.1 29.610 385 191 17 67 387 40 408 1.11e-32 130
Msa1204980 AT1G74330.2 29.610 385 191 17 67 387 40 408 1.42e-32 130
Msa1204980 AT1G73690.1 28.283 297 156 10 127 387 17 292 8.31e-32 124
Msa1204980 AT5G50860.2 29.293 297 169 10 121 387 114 399 2.98e-31 124
Msa1204980 AT4G18710.1 28.758 306 167 11 120 390 39 328 3.12e-31 122
Msa1204980 AT5G50860.1 29.293 297 169 10 121 387 114 399 3.26e-31 125
Msa1204980 AT3G59790.1 29.545 308 159 11 124 392 63 351 6.07e-31 122
Msa1204980 AT5G26751.1 28.758 306 169 10 120 391 68 358 5.78e-30 120
Msa1204980 AT4G10010.2 27.759 299 175 10 119 387 154 441 9.15e-30 121
Msa1204980 AT1G18040.1 28.866 291 162 10 127 387 18 293 1.07e-29 119
Msa1204980 AT1G18670.2 30.263 304 164 12 119 387 129 419 1.12e-29 121
Msa1204980 AT3G05840.2 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa1204980 AT3G05840.1 28.431 306 170 10 120 391 72 362 1.23e-29 119
Msa1204980 AT1G18670.3 29.934 304 165 12 119 387 129 419 1.44e-29 121
Msa1204980 AT1G18670.1 30.263 304 164 12 119 387 129 419 1.83e-29 120
Msa1204980 AT1G54610.1 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1204980 AT1G54610.3 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1204980 AT1G54610.2 27.327 333 184 13 102 387 82 403 3.07e-29 119
Msa1204980 AT1G53050.2 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa1204980 AT1G53050.1 29.431 299 170 12 119 387 132 419 3.67e-29 120
Msa1204980 AT1G09840.3 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.7 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.10 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.6 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.4 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.1 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.9 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.5 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.8 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT1G09840.2 28.713 303 159 12 127 391 89 372 1.03e-28 116
Msa1204980 AT5G39420.1 27.852 298 174 11 119 386 103 389 1.15e-28 118
Msa1204980 AT1G57870.3 28.053 303 161 12 127 391 88 371 2.45e-28 115
Msa1204980 AT1G57870.1 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1204980 AT1G57870.4 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1204980 AT1G57870.2 28.053 303 161 12 127 391 88 371 2.54e-28 115
Msa1204980 AT3G01085.1 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa1204980 AT3G01085.2 29.801 302 166 11 119 387 113 401 2.61e-28 117
Msa1204980 AT3G01085.3 29.801 302 166 11 119 387 113 401 2.78e-28 117
Msa1204980 AT4G01370.1 26.667 300 179 10 124 392 46 335 1.13e-27 113
Msa1204980 AT4G19110.1 26.000 300 172 11 119 386 2 283 1.21e-27 114
Msa1204980 AT4G19110.2 26.000 300 172 11 119 386 2 283 1.36e-27 114
Msa1204980 AT1G09840.11 32.143 196 109 6 204 391 66 245 1.67e-27 110
Msa1204980 AT2G38620.3 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa1204980 AT2G38620.1 29.615 260 121 9 119 324 2 253 2.71e-27 109
Msa1204980 AT3G61160.5 28.421 285 155 10 127 377 108 377 3.19e-27 112
Msa1204980 AT5G45430.2 27.000 300 165 11 121 386 4 283 3.81e-27 113
Msa1204980 AT2G43790.1 26.797 306 170 11 124 392 66 354 4.04e-27 111
Msa1204980 AT5G45430.1 27.000 300 165 11 121 386 4 283 4.51e-27 112
Msa1204980 AT4G10010.1 29.249 253 143 9 160 387 20 261 5.36e-27 112
Msa1204980 AT1G10210.2 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1204980 AT1G10210.3 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1204980 AT1G10210.1 27.961 304 171 12 121 389 32 322 6.76e-27 110
Msa1204980 AT4G22940.1 27.832 309 175 11 113 386 93 388 7.58e-27 112
Msa1204980 AT4G13020.1 26.710 307 178 9 121 393 4 297 7.77e-27 111
Msa1204980 AT4G13020.6 26.871 294 175 8 121 387 4 284 7.88e-27 110
Msa1204980 AT4G11330.1 27.333 300 177 10 124 392 46 335 8.13e-27 110
Msa1204980 AT1G66750.1 27.852 298 172 9 119 387 11 294 8.55e-27 110
Msa1204980 AT4G13020.4 26.710 307 178 9 121 393 4 297 8.59e-27 110
Msa1204980 AT4G13020.2 26.710 307 178 9 121 393 12 305 1.06e-26 111
Msa1204980 AT4G13020.3 26.710 307 178 9 121 393 12 305 1.07e-26 111
Msa1204980 AT1G01560.2 26.936 297 176 10 124 389 43 329 1.09e-26 110
Msa1204980 AT4G22940.2 27.832 309 175 11 113 386 93 388 1.12e-26 112
Msa1204980 AT4G13020.7 26.871 294 175 8 121 387 4 284 1.42e-26 110
Msa1204980 AT1G07880.2 26.230 305 174 9 124 392 36 325 1.61e-26 109
Msa1204980 AT2G46070.1 27.333 300 177 10 124 392 44 333 2.10e-26 109
Msa1204980 AT1G71530.2 26.421 299 179 9 119 387 145 432 2.39e-26 110
Msa1204980 AT2G46070.3 27.333 300 177 10 124 392 78 367 2.43e-26 109
Msa1204980 AT1G03740.2 27.362 307 178 12 113 386 203 497 4.00e-26 111
Msa1204980 AT1G03740.1 27.362 307 178 12 113 386 203 497 4.49e-26 110
Msa1204980 AT4G13020.5 25.633 316 179 9 121 393 4 306 1.01e-25 108
Msa1204980 AT1G71530.1 26.421 299 179 9 119 387 145 432 1.11e-25 109
Msa1204980 AT1G71530.3 26.621 293 174 9 119 381 145 426 1.56e-25 107
Msa1204980 AT5G44290.7 27.027 296 175 9 121 386 137 421 1.57e-25 108
Msa1204980 AT2G01450.3 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1204980 AT2G01450.1 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1204980 AT2G01450.2 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1204980 AT2G01450.4 28.261 322 185 12 113 398 8 319 1.73e-25 108
Msa1204980 AT4G13020.8 25.743 303 176 8 121 387 4 293 1.75e-25 107
Msa1204980 AT5G44290.6 27.027 296 175 9 121 386 137 421 1.80e-25 108
Msa1204980 AT5G44290.2 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1204980 AT5G44290.5 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1204980 AT5G44290.4 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1204980 AT5G44290.1 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1204980 AT5G44290.3 27.365 296 174 10 121 386 137 421 3.28e-25 108
Msa1204980 AT2G18170.1 26.948 308 177 12 121 391 32 328 3.39e-25 105
Msa1204980 AT1G67580.1 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa1204980 AT1G67580.2 28.797 316 161 13 119 389 404 700 3.51e-25 108
Msa1204980 AT1G59580.2 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa1204980 AT1G59580.1 28.013 307 167 12 121 389 32 322 4.36e-25 105
Msa1204980 AT2G42880.2 28.254 315 180 12 115 393 19 323 7.79e-25 106
Msa1204980 AT1G33770.1 29.778 225 125 7 119 313 139 360 7.95e-25 107
Msa1204980 AT2G42880.1 28.254 315 180 12 115 393 19 323 1.04e-24 106
Msa1204980 AT3G45640.1 27.491 291 170 8 127 386 44 324 2.03e-24 103
Msa1204980 AT1G09600.1 27.852 298 174 11 119 386 161 447 2.39e-24 105
Msa1204980 AT5G64960.1 26.100 341 189 13 91 386 3 325 3.61e-24 104
Msa1204980 AT1G73670.1 26.518 313 184 12 113 389 82 384 4.25e-24 104
Msa1204980 AT3G14720.1 28.707 317 180 12 113 393 17 323 4.81e-24 104
Msa1204980 AT4G36450.1 26.250 320 173 12 121 395 32 333 5.39e-24 102
Msa1204980 AT5G10270.1 25.740 338 188 12 94 386 6 325 6.76e-24 103
Msa1204980 AT3G61160.3 29.817 218 118 7 127 313 108 321 8.26e-24 101
Msa1204980 AT3G14720.2 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa1204980 AT3G14720.3 28.707 317 180 12 113 393 17 323 1.07e-23 102
Msa1204980 AT3G61160.6 29.817 218 118 7 127 313 115 328 1.44e-23 101
Msa1204980 AT3G05050.3 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1204980 AT3G05050.2 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1204980 AT3G05050.1 28.980 245 124 9 119 325 136 368 1.63e-23 103
Msa1204980 AT4G19110.3 25.630 238 138 7 174 386 4 227 4.54e-23 100
Msa1204980 AT5G19010.1 26.498 317 187 12 113 393 17 323 9.04e-23 100
Msa1204980 AT1G71530.4 29.187 209 115 6 119 297 145 350 1.70e-22 98.2
Msa1204980 AT1G53510.1 26.582 316 188 10 113 393 17 323 2.91e-22 99.4
Msa1204980 AT3G18040.5 27.500 320 180 13 113 393 10 316 5.47e-22 98.2
Msa1204980 AT5G63370.2 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa1204980 AT5G63370.3 24.921 317 177 11 119 389 161 462 5.63e-22 97.8
Msa1204980 AT3G18040.4 27.500 320 180 13 113 393 124 430 5.89e-22 98.6
Msa1204980 AT3G18040.1 27.500 320 180 13 113 393 15 321 6.08e-22 98.2
Msa1204980 AT1G01560.3 26.224 286 170 10 124 378 43 318 6.23e-22 96.3
Msa1204980 AT3G18040.3 27.500 320 180 13 113 393 124 430 7.67e-22 98.2
Msa1204980 AT5G63370.7 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1204980 AT5G63370.8 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1204980 AT5G63370.4 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1204980 AT5G63370.6 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1204980 AT5G63370.1 24.921 317 177 11 119 389 295 596 8.33e-22 97.8
Msa1204980 AT2G46070.2 26.950 282 165 10 124 374 44 315 9.42e-22 95.5
Msa1204980 AT4G18710.2 28.889 225 125 7 120 313 33 253 1.01e-21 94.4
Msa1204980 AT3G53570.1 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1204980 AT3G53570.4 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1204980 AT3G53570.2 23.952 334 183 11 121 387 115 444 3.36e-21 95.5
Msa1204980 AT3G53570.3 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa1204980 AT3G53570.5 23.952 334 183 11 121 387 101 430 3.88e-21 95.1
Msa1204980 AT1G57700.1 28.444 225 128 7 119 313 144 365 9.15e-21 95.1
Msa1204980 AT2G41140.1 24.129 373 190 15 56 386 64 385 9.72e-21 94.7
Msa1204980 AT5G63610.1 28.261 322 174 16 114 386 20 333 1.01e-20 94.4
Msa1204980 AT5G12480.1 24.731 372 180 14 53 386 8 317 2.38e-20 93.6
Msa1204980 AT3G57530.2 25.234 321 159 11 118 398 60 339 2.84e-20 92.4
Msa1204980 AT1G07880.1 28.111 217 123 7 124 310 36 249 6.02e-20 89.0
Msa1204980 AT2G41860.1 25.472 318 156 11 121 398 54 330 7.13e-20 92.0
Msa1204980 AT5G64960.2 29.057 265 137 11 162 386 19 272 7.15e-20 91.7
Msa1204980 AT2G41860.2 25.472 318 156 11 121 398 54 330 1.14e-19 91.3
Msa1204980 AT3G57530.1 25.472 318 156 11 121 398 63 339 1.27e-19 91.3
Msa1204980 AT5G24430.1 24.756 307 152 10 118 386 140 405 2.32e-19 90.5
Msa1204980 AT1G01560.4 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa1204980 AT1G01560.1 27.650 217 124 7 124 310 43 256 3.37e-19 87.4
Msa1204980 AT3G19100.1 25.402 311 159 11 118 393 141 413 5.16e-19 89.4
Msa1204980 AT1G18890.1 25.743 303 150 10 118 386 60 321 5.65e-19 89.4
Msa1204980 AT2G46700.1 25.418 299 154 10 121 386 143 405 5.99e-19 89.4
Msa1204980 AT5G63370.9 28.017 232 124 9 119 313 161 386 6.63e-19 88.2
Msa1204980 AT2G38910.1 25.581 301 151 10 118 385 131 391 6.79e-19 89.0
Msa1204980 AT5G63370.5 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa1204980 AT5G63370.10 28.017 232 124 9 119 313 295 520 6.84e-19 89.0
Msa1204980 AT5G12180.1 25.246 305 143 10 121 386 73 331 7.61e-19 89.0
Msa1204980 AT3G49370.1 24.671 304 156 10 118 386 139 404 2.34e-18 87.4
Msa1204980 AT1G76040.3 25.407 307 148 11 121 390 112 374 2.88e-18 87.0
Msa1204980 AT1G76040.2 25.407 307 148 11 121 390 112 374 3.52e-18 87.0
Msa1204980 AT5G19450.2 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa1204980 AT5G19450.1 25.667 300 148 10 121 386 57 315 7.74e-18 85.9
Msa1204980 AT2G37840.1 25.641 312 158 13 120 398 11 281 3.84e-17 84.0
Msa1204980 AT3G53930.1 25.402 311 160 12 120 398 19 289 6.19e-17 83.2
Msa1204980 AT3G53930.2 25.402 311 160 12 120 398 19 289 7.03e-17 83.2
Msa1204980 AT3G18040.2 31.000 200 117 8 203 393 46 233 1.18e-16 81.6
Msa1204980 AT2G46700.2 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa1204980 AT2G46700.3 25.292 257 132 8 154 386 4 224 1.42e-16 81.3
Msa1204980 AT3G51850.3 23.432 303 157 9 118 386 51 312 2.52e-16 80.5
Msa1204980 AT5G04870.1 24.150 294 158 8 121 385 150 407 2.96e-16 81.3
Msa1204980 AT5G57630.2 25.616 203 117 6 121 294 12 209 3.91e-16 80.1
Msa1204980 AT5G57630.1 25.616 203 117 6 121 294 12 209 4.21e-16 80.1
Msa1204980 AT5G39440.1 26.570 207 112 7 120 294 18 216 5.04e-16 80.1
Msa1204980 AT3G50530.2 22.477 436 211 16 29 386 55 441 5.26e-16 80.5
Msa1204980 AT1G53570.1 22.000 300 163 7 127 395 220 479 7.40e-16 79.7
Msa1204980 AT1G53570.4 22.000 300 163 7 127 395 220 479 7.66e-16 79.7
Msa1204980 AT1G53570.2 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa1204980 AT1G53570.3 22.000 300 163 7 127 395 220 479 7.95e-16 79.7
Msa1204980 AT2G25090.1 26.606 218 114 10 119 295 13 225 9.53e-16 79.3
Msa1204980 AT1G53570.6 22.000 300 163 7 127 395 220 479 9.53e-16 79.3
Msa1204980 AT1G53570.7 22.000 300 163 7 127 395 220 479 1.01e-15 79.3
Msa1204980 AT1G54960.1 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa1204980 AT1G54960.2 23.510 302 142 11 127 385 74 329 1.13e-15 79.3
Msa1204980 AT2G45490.2 26.667 210 117 9 114 294 16 217 1.50e-15 76.3
Msa1204980 AT3G51850.1 23.220 323 165 10 118 398 51 332 1.71e-15 78.6
Msa1204980 AT1G08650.1 23.490 298 157 10 121 386 15 273 1.73e-15 76.6
Msa1204980 AT3G51850.2 23.220 323 165 10 118 398 51 332 1.82e-15 78.6
Msa1204980 AT3G04530.1 22.152 316 177 9 111 395 1 278 2.09e-15 76.3
Msa1204980 AT4G04700.1 23.750 320 164 10 121 398 28 309 2.10e-15 78.2
Msa1204980 AT4G32660.1 24.096 332 180 11 121 386 71 396 3.14e-15 77.4
Msa1204980 AT4G32660.3 24.096 332 180 11 121 386 63 388 3.55e-15 77.0
Msa1204980 AT2G45490.1 26.667 210 117 9 114 294 16 217 3.58e-15 75.9
Msa1204980 AT1G12680.1 24.055 291 158 10 119 386 105 355 4.88e-15 77.0
Msa1204980 AT1G50240.3 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa1204980 AT1G50240.2 28.846 260 134 12 119 343 4 247 8.26e-15 77.0
Msa1204980 AT5G12480.2 28.796 191 98 6 198 386 69 223 1.26e-14 75.5
Msa1204980 AT3G01090.3 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa1204980 AT3G01090.1 26.087 207 114 6 120 294 18 217 1.43e-14 75.9
Msa1204980 AT3G01090.2 26.087 207 114 6 120 294 41 240 1.53e-14 75.9
Msa1204980 AT5G21326.1 27.885 208 110 9 121 294 13 214 3.62e-14 74.3
Msa1204980 AT5G23580.1 23.125 320 169 11 101 386 4 280 5.97e-14 73.6
Msa1204980 AT3G06030.1 22.517 302 155 10 127 390 74 334 6.36e-14 73.9
Msa1204980 AT1G09000.2 22.517 302 145 11 127 385 75 330 6.73e-14 73.9
Msa1204980 AT1G08650.2 23.411 299 156 11 121 387 15 272 6.96e-14 72.0
Msa1204980 AT5G25110.1 29.327 208 106 10 121 294 43 243 6.99e-14 73.6
Msa1204980 AT1G01140.2 27.273 209 112 9 120 294 18 220 7.10e-14 73.6
Msa1204980 AT1G01140.1 27.273 209 112 9 120 294 18 220 7.52e-14 73.2
Msa1204980 AT1G09000.1 22.517 302 145 11 127 385 75 330 7.92e-14 73.6
Msa1204980 AT1G01140.3 27.273 209 112 9 120 294 18 220 9.20e-14 73.2
Msa1204980 AT3G63280.4 22.327 318 174 9 102 388 39 314 1.03e-13 73.2
Msa1204980 AT5G10930.1 27.751 209 109 10 121 294 12 213 1.37e-13 72.4
Msa1204980 AT2G26980.2 28.846 208 108 10 121 294 14 215 1.38e-13 70.9
Msa1204980 AT4G32830.1 25.455 220 126 8 119 307 29 241 2.10e-13 70.9
Msa1204980 AT3G63280.2 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1204980 AT3G63280.3 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1204980 AT3G63280.1 28.649 185 91 5 205 388 116 260 2.27e-13 72.0
Msa1204980 AT2G26980.1 27.885 208 110 9 121 294 14 215 2.40e-13 71.2
Msa1204980 AT2G26980.3 27.885 208 110 9 121 294 14 215 2.88e-13 71.6
Msa1204980 AT2G26980.4 27.885 208 110 9 121 294 24 225 3.16e-13 71.2
Msa1204980 AT5G18700.1 26.761 213 125 6 119 306 2 208 4.91e-13 71.6
Msa1204980 AT2G26980.5 27.885 208 110 9 121 294 14 215 5.15e-13 70.5
Msa1204980 AT5G01810.3 25.728 206 116 8 121 294 12 212 7.67e-13 69.7
Msa1204980 AT5G01810.1 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa1204980 AT5G01810.2 25.728 206 116 8 121 294 12 212 1.20e-12 69.3
Msa1204980 AT5G21222.1 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1204980 AT5G21222.2 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1204980 AT5G21222.4 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1204980 AT5G21222.3 27.317 205 115 8 121 294 13 214 1.27e-12 70.1
Msa1204980 AT4G32660.4 25.200 250 145 9 173 386 41 284 1.47e-12 68.2
Msa1204980 AT2G30360.1 27.143 210 110 7 121 294 21 223 2.81e-12 68.6
Msa1204980 AT2G25880.1 25.366 205 117 7 119 294 23 220 3.32e-12 67.0
Msa1204980 AT5G58380.1 25.110 227 126 11 119 312 10 225 3.39e-12 68.2
Msa1204980 AT4G18700.1 25.728 206 116 8 121 294 26 226 3.46e-12 68.2
Msa1204980 AT5G35410.2 27.404 208 109 9 121 294 11 210 3.57e-12 67.8
Msa1204980 AT2G25880.4 25.366 205 117 7 119 294 36 233 3.67e-12 67.0
Msa1204980 AT4G24400.2 26.341 205 115 8 121 294 9 208 3.79e-12 67.8
Msa1204980 AT4G24400.1 26.341 205 115 8 121 294 9 208 5.31e-12 67.4
Msa1204980 AT2G25880.3 25.366 205 117 7 119 294 84 281 5.80e-12 67.0
Msa1204980 AT5G35410.1 27.404 208 109 9 121 294 11 210 7.15e-12 67.0
Msa1204980 AT1G30270.1 25.962 208 114 10 121 294 31 232 7.48e-12 67.4
Msa1204980 AT2G38490.1 26.761 213 115 10 121 297 28 235 8.83e-12 67.0
Msa1204980 AT1G30270.2 25.962 208 114 10 121 294 31 232 9.46e-12 67.0
Msa1204980 AT1G07150.2 23.986 296 154 11 127 391 15 270 1.91e-11 65.9
Msa1204980 AT5G45820.1 25.490 204 119 8 121 294 12 212 2.27e-11 65.5
Msa1204980 AT4G14580.1 25.688 218 122 8 110 294 13 223 2.33e-11 65.5
Msa1204980 AT5G45810.1 26.699 206 114 9 121 294 28 228 2.37e-11 65.9
Msa1204980 AT1G07150.1 23.986 296 154 11 127 391 29 284 2.57e-11 65.5
Msa1204980 AT1G69220.1 22.185 302 170 11 121 395 249 512 4.84e-11 65.1
Msa1204980 AT4G30960.1 26.471 204 117 9 121 294 24 224 9.53e-11 63.5

Find 137 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAGCAACTTTACAATAT+TGG 0.174324 8_1:-60950447 None:intergenic
CTACTTTCCACATTTCTAAT+TGG 0.197072 8_1:-60954510 None:intergenic
CATGGTCAATCATTACATTA+TGG 0.216955 8_1:-60951643 None:intergenic
TTACGGCCATAAATGGAAAA+TGG 0.221628 8_1:-60948191 None:intergenic
TTGGGGAATTTATTATTATA+AGG 0.235099 8_1:-60948294 None:intergenic
ATCACCTTCTTCTTCTTAAC+AGG 0.265122 8_1:-60948794 None:intergenic
TTTCTAATTGGATTGAAGTA+TGG 0.265994 8_1:-60954498 None:intergenic
TCAAGCAACTTTACAATATT+GGG 0.269800 8_1:-60950446 None:intergenic
CTGATGCTTGTTGTGATATA+TGG 0.290243 8_1:+60954556 Msa1204980:three_prime_UTR
GAAGAAAGAGAGAAAAGATT+TGG 0.291801 8_1:-60948313 None:intergenic
AAGAAAGAGAGAAAAGATTT+GGG 0.292694 8_1:-60948312 None:intergenic
TTCTCTTGCCCTATTGCCTT+TGG 0.297403 8_1:+60954674 Msa1204980:three_prime_UTR
TCGTTCGTCCTAAGGAATAT+TGG 0.306347 8_1:+60948499 Msa1204980:CDS
GTCAAGGGAAAATAATTAAA+AGG 0.327336 8_1:-60948168 None:intergenic
TTCTTCATGCAATAGGTACT+TGG 0.333411 8_1:+60953299 Msa1204980:intron
ATGGTCAATCATTACATTAT+GGG 0.347598 8_1:-60951642 None:intergenic
AATCGGAAACCAAAGGCAAT+AGG 0.350752 8_1:-60954683 None:intergenic
CTAGCCTTGGATGCAGCGCC+GGG 0.352434 8_1:-60948456 None:intergenic
TTTATGGTGGAACTTGCATT+TGG 0.353006 8_1:+60954612 Msa1204980:three_prime_UTR
CGTTCGTCCTAAGGAATATT+GGG 0.365960 8_1:+60948500 Msa1204980:CDS
CAACTTGTCGCGCGATAGAT+TGG 0.369074 8_1:+60948233 Msa1204980:CDS
AGTCTTGGTTGTATGTTTGC+CGG 0.369394 8_1:+60952616 Msa1204980:CDS
ATACAAGACTTTAACTCAAA+TGG 0.385733 8_1:-60954788 None:intergenic
TAAGCTTCGCCTTATAGATT+GGG 0.388647 8_1:+60951673 Msa1204980:CDS
GAGGCCGCGGACGGCGGAAA+TGG 0.391900 8_1:-60948377 None:intergenic
GTCGACATGGCGCAGAAATT+CGG 0.393607 8_1:+60948417 Msa1204980:CDS
TGAAGATCAACAAGAAGCTC+TGG 0.398089 8_1:-60952565 None:intergenic
TGGTGAGGAAAGTGGGAAGG+GGG 0.401011 8_1:+60948702 Msa1204980:CDS
CCTAGCCTTGGATGCAGCGC+CGG 0.401329 8_1:-60948457 None:intergenic
ATGATTACTCTCTAGATTTG+TGG 0.402583 8_1:+60952593 Msa1204980:CDS
TCTCTAGATTTGTGGAGTCT+TGG 0.405112 8_1:+60952601 Msa1204980:CDS
TTCCACCAAAATAACAAAAT+CGG 0.406762 8_1:-60954700 None:intergenic
GTAAGCTTCGCCTTATAGAT+TGG 0.409217 8_1:+60951672 Msa1204980:CDS
CCGCCCCGGCGCTGCATCCA+AGG 0.409970 8_1:+60948452 Msa1204980:CDS
CATAAAAGAACGGCTCCTTC+CGG 0.410947 8_1:-60952830 None:intergenic
CCGGCGCTGCATCCAAGGCT+AGG 0.413393 8_1:+60948457 Msa1204980:CDS
TCGTAATCCCAATATTCCTT+AGG 0.421950 8_1:-60948507 None:intergenic
GTGTGTTGTTACAGATATTC+CGG 0.422815 8_1:+60952811 Msa1204980:intron
TATCGCGCGACAAGTTGAAT+TGG 0.429474 8_1:-60948227 None:intergenic
AATCTAAAACTAACATTCGT+TGG 0.430858 8_1:-60954840 None:intergenic
TACGGCCATAAATGGAAAAT+GGG 0.433696 8_1:-60948190 None:intergenic
GACTTGGGGTCTTCGACTGC+TGG 0.437978 8_1:-60950481 None:intergenic
GTGGTGAGGAAAGTGGGAAG+GGG 0.445623 8_1:+60948701 Msa1204980:CDS
ATCAACTGGTCAAGATAGCC+AGG 0.451077 8_1:+60952868 Msa1204980:CDS
TTATGGTGGAACTTGCATTT+GGG 0.451883 8_1:+60954613 Msa1204980:three_prime_UTR
ATCGGAAACCAAAGGCAATA+GGG 0.453867 8_1:-60954682 None:intergenic
AAAATATTACAGAATCTTTG+TGG 0.454458 8_1:+60950419 Msa1204980:CDS
GGACGAGGAGGAGGAGGCCG+CGG 0.455638 8_1:-60948390 None:intergenic
ATAATGTTCGTGTGGCTTCA+AGG 0.460306 8_1:+60951729 Msa1204980:CDS
CTTGCAGAGTTCTATCATCC+TGG 0.462557 8_1:+60951698 Msa1204980:CDS
TTGTTGAGGAGGAGCGGCGG+AGG 0.464840 8_1:-60948335 None:intergenic
ATCTAAAACTAACATTCGTT+GGG 0.465336 8_1:-60954839 None:intergenic
CAGGGAGCAAGATGATTATG+AGG 0.465533 8_1:+60948679 Msa1204980:intron
GGACGGCGGAAATGGTTGTT+CGG 0.468995 8_1:-60948369 None:intergenic
TCGACGGGTGGACGAGGAGG+AGG 0.470054 8_1:-60948399 None:intergenic
CATATTCAAATATGAGACTT+GGG 0.472470 8_1:-60950496 None:intergenic
TGTCAACGTCGTTCGTCCTA+AGG 0.474374 8_1:+60948491 Msa1204980:CDS
GAATTTCTGCGCCATGTCGA+CGG 0.478106 8_1:-60948415 None:intergenic
TTCGCAAGGGATTATGCATC+GGG 0.480545 8_1:+60951610 Msa1204980:CDS
AATTTCTGCGCCATGTCGAC+GGG 0.480934 8_1:-60948414 None:intergenic
TCACGATAACTATGATCAAC+TGG 0.483295 8_1:+60952854 Msa1204980:CDS
TAATTGGATTGAAGTATGGA+TGG 0.486342 8_1:-60954494 None:intergenic
TGGTTGTATGTTTGCCGGGA+TGG 0.488196 8_1:+60952621 Msa1204980:CDS
GAGGAGGAGGCCGCGGACGG+CGG 0.488703 8_1:-60948383 None:intergenic
AAATGGTTGTTCGGCGGTGA+CGG 0.488819 8_1:-60948360 None:intergenic
AAATTTGCTGCTTACCATCC+CGG 0.491733 8_1:-60952635 None:intergenic
GTATTTGTAACAGGCATAGC+AGG 0.493852 8_1:+60953485 Msa1204980:intron
ACATATTCAAATATGAGACT+TGG 0.498562 8_1:-60950497 None:intergenic
ACGGGTGGACGAGGAGGAGG+AGG 0.498801 8_1:-60948396 None:intergenic
TGCAGCGCCGGGGCGGCGAG+TGG 0.500595 8_1:-60948445 None:intergenic
CGGCGCTGCATCCAAGGCTA+GGG 0.504072 8_1:+60948458 Msa1204980:CDS
GTCTTGGTTGTATGTTTGCC+GGG 0.506026 8_1:+60952617 Msa1204980:CDS
CCAATAAGTGCTGCAAAATG+TGG 0.509814 8_1:-60953371 None:intergenic
CCTTGGATGCAGCGCCGGGG+CGG 0.510068 8_1:-60948452 None:intergenic
GGTGGTGAGGAAAGTGGGAA+GGG 0.511063 8_1:+60948700 Msa1204980:CDS
ACGAAACCCTCACCGTTCAG+TGG 0.515437 8_1:+60948526 Msa1204980:CDS
TCCTCGTCCACCCGTCGACA+TGG 0.515882 8_1:+60948404 Msa1204980:CDS
GAGGAGGAGGAGGCCGCGGA+CGG 0.516584 8_1:-60948386 None:intergenic
GGAAAATCCACTCGCCGCCC+CGG 0.524127 8_1:+60948438 Msa1204980:CDS
ATCAGCATAAACCCTAGCCT+TGG 0.527589 8_1:-60948469 None:intergenic
CGAACATTATATTCCTTCCC+AGG 0.528772 8_1:-60951716 None:intergenic
GAATAAGTATCGCATTGAGT+TGG 0.531332 8_1:+60953346 Msa1204980:CDS
GCCATGTCGACGGGTGGACG+AGG 0.531348 8_1:-60948405 None:intergenic
CGGCGGTGACGGAGTTGTTG+AGG 0.542339 8_1:-60948349 None:intergenic
CTTCAATCCAATTAGAAATG+TGG 0.542866 8_1:+60954503 Msa1204980:CDS
TCTTCATGCAATAGGTACTT+GGG 0.546369 8_1:+60953300 Msa1204980:intron
TGGTCAATCATTACATTATG+GGG 0.546942 8_1:-60951641 None:intergenic
CGAAACCCTCACCGTTCAGT+GGG 0.549905 8_1:+60948527 Msa1204980:CDS
TATGAGGTGGTGAGGAAAGT+GGG 0.551839 8_1:+60948695 Msa1204980:CDS
AAGCTTCGCCTTATAGATTG+GGG 0.553750 8_1:+60951674 Msa1204980:CDS
TTTGCTTGTAGATATTTCAA+AGG 0.554007 8_1:+60952541 Msa1204980:intron
ACAACCATTTCCGCCGTCCG+CGG 0.556867 8_1:+60948373 Msa1204980:CDS
CAAACCTGTTAAGAAGAAGA+AGG 0.558576 8_1:+60948790 Msa1204980:CDS
ATTCGCAAGGGATTATGCAT+CGG 0.562645 8_1:+60951609 Msa1204980:CDS
TTCTGCGCCATGTCGACGGG+TGG 0.563527 8_1:-60948411 None:intergenic
GGCGAAGCTTACGCTGCTCA+TGG 0.566986 8_1:-60951661 None:intergenic
TGGATTATTGCCATTCGCAA+GGG 0.572093 8_1:+60951597 Msa1204980:CDS
TTGGATTATTGCCATTCGCA+AGG 0.572743 8_1:+60951596 Msa1204980:CDS
AGGTGGTGAGGAAAGTGGGA+AGG 0.574076 8_1:+60948699 Msa1204980:CDS
TTGCAGAGTTCTATCATCCT+GGG 0.574095 8_1:+60951699 Msa1204980:CDS
AAGATGATTATGAGGTGGTG+AGG 0.574125 8_1:+60948687 Msa1204980:CDS
GAAGATCAACAAGAAGCTCT+GGG 0.576772 8_1:-60952564 None:intergenic
CATAAATGGAAAATGGGTCA+AGG 0.580087 8_1:-60948184 None:intergenic
AATTGGATTGAAGTATGGAT+GGG 0.580143 8_1:-60954493 None:intergenic
TATTACAGAATCTTTGTGGA+GGG 0.582117 8_1:+60950423 Msa1204980:CDS
GAATATTAATGCAGATCAAG+AGG 0.585346 8_1:+60950390 Msa1204980:intron
ACATTAATGAACCTTTGCCA+TGG 0.589071 8_1:-60953511 None:intergenic
TTATGAGGTGGTGAGGAAAG+TGG 0.590823 8_1:+60948694 Msa1204980:CDS
GCCCACTGCAAAAGAAGCCA+TGG 0.601915 8_1:+60953683 Msa1204980:CDS
AGCTTCGCCTTATAGATTGG+GGG 0.605039 8_1:+60951675 Msa1204980:CDS
ACAGGCATAGCAGGAAGCCA+TGG 0.605939 8_1:+60953494 Msa1204980:intron
ATAAATGGAAAATGGGTCAA+GGG 0.610662 8_1:-60948183 None:intergenic
AATATTAATGCAGATCAAGA+GGG 0.616701 8_1:+60950391 Msa1204980:intron
GATGCATAATCCCTTGCGAA+TGG 0.619795 8_1:-60951607 None:intergenic
CAATAAGTGCTGCAAAATGT+GGG 0.623756 8_1:-60953370 None:intergenic
TACGATACGATCACCAAGAA+CGG 0.628422 8_1:+60953661 Msa1204980:CDS
ATAGCAGGAAGCCATGGCAA+AGG 0.632015 8_1:+60953500 Msa1204980:CDS
ACGGAGTTGTTGAGGAGGAG+CGG 0.635011 8_1:-60948341 None:intergenic
ATAACAAAATCGGAAACCAA+AGG 0.635578 8_1:-60954690 None:intergenic
ATATTCAAATATGAGACTTG+GGG 0.638686 8_1:-60950495 None:intergenic
ATATTACAGAATCTTTGTGG+AGG 0.642832 8_1:+60950422 Msa1204980:CDS
TTATCGTGACCATAAAAGAA+CGG 0.643726 8_1:-60952840 None:intergenic
GAGTTGTTGAGGAGGAGCGG+CGG 0.657530 8_1:-60948338 None:intergenic
CGGTGACGGAGTTGTTGAGG+AGG 0.657562 8_1:-60948346 None:intergenic
TCAACACTTGACTGTTCCTG+AGG 0.658381 8_1:+60953540 Msa1204980:CDS
GTTGTTACAGATATTCCGGA+AGG 0.660267 8_1:+60952815 Msa1204980:intron
ATGTCGACGGGTGGACGAGG+AGG 0.661644 8_1:-60948402 None:intergenic
CGGCGGAAATGGTTGTTCGG+CGG 0.661894 8_1:-60948366 None:intergenic
AGAAAGAGAGAAAAGATTTG+GGG 0.663467 8_1:-60948311 None:intergenic
CATGCAATAGGTACTTGGGA+CGG 0.665861 8_1:+60953304 Msa1204980:intron
AGAGTTCTATCATCCTGGGA+AGG 0.669867 8_1:+60951703 Msa1204980:CDS
GAAGGAATATAATGTTCGTG+TGG 0.681364 8_1:+60951721 Msa1204980:CDS
GGAGCAAGATGATTATGAGG+TGG 0.686228 8_1:+60948682 Msa1204980:CDS
TAGCCTTGGATGCAGCGCCG+GGG 0.687087 8_1:-60948455 None:intergenic
AAACCCTCACCGTTCAGTGG+GGG 0.687592 8_1:+60948529 Msa1204980:CDS
TCAACTGGTCAAGATAGCCA+GGG 0.708823 8_1:+60952869 Msa1204980:CDS
GAAACCCTCACCGTTCAGTG+GGG 0.713472 8_1:+60948528 Msa1204980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATATAATATGACAAT+CGG - chr8_1:60950353-60950372 None:intergenic 10.0%
!! ATAAAAAATTCATAATTATC+CGG + chr8_1:60951158-60951177 Msa1204980:intron 10.0%
!!! AATAATTAATGTTTTTTGAG+AGG - chr8_1:60948106-60948125 None:intergenic 15.0%
!!! TAATAGCCTTAATTTTTTTT+AGG + chr8_1:60948133-60948152 Msa1204980:five_prime_UTR 15.0%
!!! AATAGCCTTAATTTTTTTTA+GGG + chr8_1:60948134-60948153 Msa1204980:five_prime_UTR 15.0%
!!! TAATTGATTTTGTATAGTTT+AGG + chr8_1:60948597-60948616 Msa1204980:intron 15.0%
!!! TGATTTTATTTTCTCTTTTT+AGG + chr8_1:60948813-60948832 Msa1204980:intron 15.0%
!!! GATTTTATTTTCTCTTTTTA+GGG + chr8_1:60948814-60948833 Msa1204980:intron 15.0%
!! AATCAAAGATCATAATAATT+GGG + chr8_1:60949696-60949715 Msa1204980:intron 15.0%
!!! TTTCTTTTTCTAAACTATAA+TGG + chr8_1:60950318-60950337 Msa1204980:intron 15.0%
!!! TATACTAGATGTTTTTTTAT+AGG + chr8_1:60950699-60950718 Msa1204980:intron 15.0%
!!! ATACTAGATGTTTTTTTATA+GGG + chr8_1:60950700-60950719 Msa1204980:intron 15.0%
!!! TTTTAAAATTTCAAGTTTGA+AGG + chr8_1:60951965-60951984 Msa1204980:intron 15.0%
!! TGTATAAATGAGATAAAAAA+AGG - chr8_1:60952518-60952537 None:intergenic 15.0%
!! AATAAAAACATTGCATTATA+AGG - chr8_1:60952662-60952681 None:intergenic 15.0%
!!! GTTTTTATTGTTTAGTATTT+AGG + chr8_1:60952673-60952692 Msa1204980:intron 15.0%
!!! AACTTTCATTATTTTTATGA+AGG + chr8_1:60953614-60953633 Msa1204980:intron 15.0%
!! AATGAAAATACTAAAAGATT+GGG - chr8_1:60953715-60953734 None:intergenic 15.0%
!!! TTTTAGTAAAGAAACTATTT+AGG + chr8_1:60953860-60953879 Msa1204980:intron 15.0%
!!! AAAAGTATTGAAATAGAAAA+TGG + chr8_1:60954095-60954114 Msa1204980:intron 15.0%
!!! AAAATCTGAACTTTTATTTA+TGG + chr8_1:60954596-60954615 Msa1204980:three_prime_UTR 15.0%
!!! ATAGCCTTAATTTTTTTTAG+GGG + chr8_1:60948135-60948154 Msa1204980:five_prime_UTR 20.0%
!!! TTTTCCCCTAAAAAAAATTA+AGG - chr8_1:60948142-60948161 None:intergenic 20.0%
!! TTGGGGAATTTATTATTATA+AGG - chr8_1:60948297-60948316 None:intergenic 20.0%
!! TTTAGGAAAATGAAATTCTA+GGG + chr8_1:60948614-60948633 Msa1204980:intron 20.0%
!! TATGTGTAATTACTCATAAA+TGG + chr8_1:60948965-60948984 Msa1204980:intron 20.0%
!! AACATAAAAGATAGCATTAT+TGG - chr8_1:60949401-60949420 None:intergenic 20.0%
!! GAATCAAAGATCATAATAAT+TGG + chr8_1:60949695-60949714 Msa1204980:intron 20.0%
!! ATCAAAGATCATAATAATTG+GGG + chr8_1:60949697-60949716 Msa1204980:intron 20.0%
!!! ATTTAGTTTCTTTGTACTTT+TGG + chr8_1:60950185-60950204 Msa1204980:intron 20.0%
!! TTAATATTCAGAAGAATATG+AGG - chr8_1:60950379-60950398 None:intergenic 20.0%
!! AAAATATTACAGAATCTTTG+TGG + chr8_1:60950419-60950438 Msa1204980:CDS 20.0%
!! AATTTCTCAGAAAACATAAA+TGG - chr8_1:60951057-60951076 None:intergenic 20.0%
!!! CTAATAAGTTGTTTTATAGT+TGG - chr8_1:60951229-60951248 None:intergenic 20.0%
!!! GTCTTTACTCTTTTTTTTAT+AGG + chr8_1:60951767-60951786 Msa1204980:intron 20.0%
!! TTGTCATTACATAATTACTT+AGG + chr8_1:60951885-60951904 Msa1204980:intron 20.0%
!!! TTTTTTTAAGGCAAAAATGT+TGG - chr8_1:60952149-60952168 None:intergenic 20.0%
!!! TTGGTAGTTTGTTTTTTTTA+AGG - chr8_1:60952161-60952180 None:intergenic 20.0%
!! TACGTGGTAAATATTAATAA+TGG + chr8_1:60952324-60952343 Msa1204980:intron 20.0%
!! CAATGAAAATACTAAAAGAT+TGG - chr8_1:60953716-60953735 None:intergenic 20.0%
!! ATAGTTTCTTTACTAAAAAG+AGG - chr8_1:60953858-60953877 None:intergenic 20.0%
!! AATCAGTAAAAAAACTGTTT+AGG + chr8_1:60953883-60953902 Msa1204980:intron 20.0%
!!! AATGGTTTGTTTAACATATT+AGG + chr8_1:60954113-60954132 Msa1204980:intron 20.0%
!! TTGTTTAACATATTAGGATT+AGG + chr8_1:60954119-60954138 Msa1204980:intron 20.0%
!!! TGATTTTTTACTTCTAATAG+TGG - chr8_1:60954186-60954205 None:intergenic 20.0%
!! AAAATATTGATCAGATACAT+TGG + chr8_1:60954243-60954262 Msa1204980:intron 20.0%
!! TATTCAATGAATCTAAAAAG+TGG + chr8_1:60954267-60954286 Msa1204980:intron 20.0%
!! TAATAAAATATACACCCATA+TGG - chr8_1:60954313-60954332 None:intergenic 20.0%
!!! ATTGAATTTTACAACAGAAA+GGG - chr8_1:60954648-60954667 None:intergenic 20.0%
!!! AATTGAATTTTACAACAGAA+AGG - chr8_1:60954649-60954668 None:intergenic 20.0%
! GTCAAGGGAAAATAATTAAA+AGG - chr8_1:60948171-60948190 None:intergenic 25.0%
!! TTGGAATTGCAAATGTTTTA+CGG - chr8_1:60948211-60948230 None:intergenic 25.0%
! AAGAAAGAGAGAAAAGATTT+GGG - chr8_1:60948315-60948334 None:intergenic 25.0%
! GTTTAGGAAAATGAAATTCT+AGG + chr8_1:60948613-60948632 Msa1204980:intron 25.0%
!! TTTTGTGTTTGTGATTTTTC+AGG + chr8_1:60948660-60948679 Msa1204980:intron 25.0%
!! TTTGTGTTTGTGATTTTTCA+GGG + chr8_1:60948661-60948680 Msa1204980:intron 25.0%
! ATAGCTGATAAATGATGATA+GGG + chr8_1:60948892-60948911 Msa1204980:intron 25.0%
! AAATTGGACTAAGATTCATA+AGG - chr8_1:60949247-60949266 None:intergenic 25.0%
! AAGATAATGATCATGATGTT+AGG - chr8_1:60949303-60949322 None:intergenic 25.0%
! TTCATTCAAAGAAGAGAAAA+GGG - chr8_1:60949428-60949447 None:intergenic 25.0%
! ATTCATTCAAAGAAGAGAAA+AGG - chr8_1:60949429-60949448 None:intergenic 25.0%
! AACTAACTAATAAGATTCTG+AGG - chr8_1:60949486-60949505 None:intergenic 25.0%
! TTATGATCTTTGATTCTCTT+AGG - chr8_1:60949691-60949710 None:intergenic 25.0%
! TATAATATGACAATCGGAAA+GGG - chr8_1:60950347-60950366 None:intergenic 25.0%
! ATATAATATGACAATCGGAA+AGG - chr8_1:60950348-60950367 None:intergenic 25.0%
! AATATTAATGCAGATCAAGA+GGG + chr8_1:60950391-60950410 Msa1204980:intron 25.0%
! TCAAGCAACTTTACAATATT+GGG - chr8_1:60950449-60950468 None:intergenic 25.0%
! ATATTCAAATATGAGACTTG+GGG - chr8_1:60950498-60950517 None:intergenic 25.0%
! CATATTCAAATATGAGACTT+GGG - chr8_1:60950499-60950518 None:intergenic 25.0%
! ACATATTCAAATATGAGACT+TGG - chr8_1:60950500-60950519 None:intergenic 25.0%
! TTATATCTATGAACTTCTGA+AGG + chr8_1:60950577-60950596 Msa1204980:intron 25.0%
! TTTAACAAATACTTCAGTCT+TGG + chr8_1:60950803-60950822 Msa1204980:intron 25.0%
!! TGTAAATGAACTGTACATTT+TGG + chr8_1:60950832-60950851 Msa1204980:intron 25.0%
!!! TACATTTTGGTTGGTATTTT+TGG + chr8_1:60950845-60950864 Msa1204980:intron 25.0%
!! TTTAATGAAGTTTTCTGATC+AGG + chr8_1:60951005-60951024 Msa1204980:intron 25.0%
! TGACAATACATACATTAACA+AGG - chr8_1:60951454-60951473 None:intergenic 25.0%
! ATGGTCAATCATTACATTAT+GGG - chr8_1:60951645-60951664 None:intergenic 25.0%
! AAGTTTGAAGGTTAAGTTTA+TGG + chr8_1:60951977-60951996 Msa1204980:intron 25.0%
! AGTTTGAAGGTTAAGTTTAT+GGG + chr8_1:60951978-60951997 Msa1204980:intron 25.0%
! ATATAAGGATTGAAGTGATA+AGG + chr8_1:60952008-60952027 Msa1204980:intron 25.0%
! TTATTATGTTACGTTAGTGA+GGG - chr8_1:60952051-60952070 None:intergenic 25.0%
! CTATTATGTTATGTTAGTGA+GGG - chr8_1:60952123-60952142 None:intergenic 25.0%
! TTTCTTGAAGAGAAAAATGT+TGG - chr8_1:60952180-60952199 None:intergenic 25.0%
!!! AAAATGATCATTTGTTATGC+TGG + chr8_1:60952241-60952260 Msa1204980:intron 25.0%
!!! AAATGATCATTTGTTATGCT+GGG + chr8_1:60952242-60952261 Msa1204980:intron 25.0%
! GTGGTAAATATTAATAATGG+TGG + chr8_1:60952327-60952346 Msa1204980:intron 25.0%
!! ATTTTCTCATTGTAATCTGA+TGG - chr8_1:60952375-60952394 None:intergenic 25.0%
! CAGATTACAATGAGAAAATA+TGG + chr8_1:60952376-60952395 Msa1204980:intron 25.0%
! AATATGGTTTAGTCCATAAT+AGG + chr8_1:60952392-60952411 Msa1204980:intron 25.0%
! TTTGCTTGTAGATATTTCAA+AGG + chr8_1:60952541-60952560 Msa1204980:intron 25.0%
! TATTGTTTAGTATTTAGGCA+TGG + chr8_1:60952678-60952697 Msa1204980:intron 25.0%
! ATATCTGAATAATTCCACAT+TGG + chr8_1:60952992-60953011 Msa1204980:intron 25.0%
! TATCTGAATAATTCCACATT+GGG + chr8_1:60952993-60953012 Msa1204980:intron 25.0%
! ATAAAAATAAGTAAGCTGTG+TGG - chr8_1:60953132-60953151 None:intergenic 25.0%
!! TTTTTCTTTCTTCATGCAAT+AGG + chr8_1:60953292-60953311 Msa1204980:intron 25.0%
! CCTGTTACAAATACAATATT+GGG - chr8_1:60953479-60953498 None:intergenic 25.0%
! TTAGAATCAACCATCAATTT+CGG - chr8_1:60953954-60953973 None:intergenic 25.0%
! AAAAAACAAGAAAAAATCCC+AGG - chr8_1:60954015-60954034 None:intergenic 25.0%
!!! TTTTTTACTTCTAATAGTGG+CGG - chr8_1:60954183-60954202 None:intergenic 25.0%
!!! ATATTTTAGACCAGATACAT+CGG - chr8_1:60954230-60954249 None:intergenic 25.0%
! TGCTTATAATAGTTACCATA+TGG + chr8_1:60954295-60954314 Msa1204980:intron 25.0%
! GCTTATAATAGTTACCATAT+GGG + chr8_1:60954296-60954315 Msa1204980:intron 25.0%
!!! TGTATTTTGCTGATTGTATT+TGG + chr8_1:60954383-60954402 Msa1204980:intron 25.0%
!! TACTCATTTTACAGAATGTT+TGG + chr8_1:60954444-60954463 Msa1204980:intron 25.0%
! ATAAATCTTAAATGCTATGC+AGG + chr8_1:60954470-60954489 Msa1204980:intron 25.0%
! TTTCTAATTGGATTGAAGTA+TGG - chr8_1:60954501-60954520 None:intergenic 25.0%
!!! ATCTGAACTTTTATTTATGG+TGG + chr8_1:60954599-60954618 Msa1204980:three_prime_UTR 25.0%
!! TTGAATTTTACAACAGAAAG+GGG - chr8_1:60954647-60954666 None:intergenic 25.0%
! TTCCACCAAAATAACAAAAT+CGG - chr8_1:60954703-60954722 None:intergenic 25.0%
! ATACAAGACTTTAACTCAAA+TGG - chr8_1:60954791-60954810 None:intergenic 25.0%
!!! TTCGTTGGGTATATTTTTTT+CGG - chr8_1:60954828-60954847 None:intergenic 25.0%
!! ATCTAAAACTAACATTCGTT+GGG - chr8_1:60954842-60954861 None:intergenic 25.0%
!! AATCTAAAACTAACATTCGT+TGG - chr8_1:60954843-60954862 None:intergenic 25.0%
ATAAATGGAAAATGGGTCAA+GGG - chr8_1:60948186-60948205 None:intergenic 30.0%
! AAATGTTTTACGGCCATAAA+TGG - chr8_1:60948201-60948220 None:intergenic 30.0%
AGAAAGAGAGAAAAGATTTG+GGG - chr8_1:60948314-60948333 None:intergenic 30.0%
GAAGAAAGAGAGAAAAGATT+TGG - chr8_1:60948316-60948335 None:intergenic 30.0%
! AAATACAGTGAGGTTTTTGA+AGG + chr8_1:60948725-60948744 Msa1204980:CDS 30.0%
!!! CTCTTTTTAGGGTTTGATTT+AGG + chr8_1:60948825-60948844 Msa1204980:intron 30.0%
CATAGCTGATAAATGATGAT+AGG + chr8_1:60948891-60948910 Msa1204980:intron 30.0%
ATGAGTATGCTAGAAATTTC+AGG - chr8_1:60949059-60949078 None:intergenic 30.0%
! TCTTCTGTCTTTTCATACAT+TGG + chr8_1:60949081-60949100 Msa1204980:intron 30.0%
! CTTCTGTCTTTTCATACATT+GGG + chr8_1:60949082-60949101 Msa1204980:intron 30.0%
TATGTCATGCTACTCTAAAT+TGG - chr8_1:60949263-60949282 None:intergenic 30.0%
ATGATGTGTATAATCCGTAA+TGG - chr8_1:60949346-60949365 None:intergenic 30.0%
! TTCTTTTTGATGTCGTTCAA+TGG - chr8_1:60949546-60949565 None:intergenic 30.0%
! TTTCTTTTGCAAGAACATAG+AGG + chr8_1:60949600-60949619 Msa1204980:intron 30.0%
!! ATCCTTCTCTGAAATTGAAT+GGG - chr8_1:60949759-60949778 None:intergenic 30.0%
!! TATCCTTCTCTGAAATTGAA+TGG - chr8_1:60949760-60949779 None:intergenic 30.0%
! TGGCAGATGTAAAATCTTTT+AGG + chr8_1:60949792-60949811 Msa1204980:intron 30.0%
CTCTTGAATTTCATATGCAA+AGG + chr8_1:60949852-60949871 Msa1204980:intron 30.0%
CATTTATCATCAAGTTACCA+TGG - chr8_1:60949942-60949961 None:intergenic 30.0%
! CATGGTAACTTGATGATAAA+TGG + chr8_1:60949940-60949959 Msa1204980:intron 30.0%
! ATATAACTGACTCCATCATA+TGG + chr8_1:60949976-60949995 Msa1204980:intron 30.0%
! TATAACTGACTCCATCATAT+GGG + chr8_1:60949977-60949996 Msa1204980:intron 30.0%
AAAATAGAAAATGTCGTGCT+GGG + chr8_1:60950101-60950120 Msa1204980:intron 30.0%
TATTCTGTAGCATAACACTA+TGG - chr8_1:60950232-60950251 None:intergenic 30.0%
TATTCTCAAGAGTGAACAAA+TGG - chr8_1:60950265-60950284 None:intergenic 30.0%
TGAGAATATGTATGATACAG+TGG + chr8_1:60950277-60950296 Msa1204980:intron 30.0%
GAATATTAATGCAGATCAAG+AGG + chr8_1:60950390-60950409 Msa1204980:intron 30.0%
ATATTACAGAATCTTTGTGG+AGG + chr8_1:60950422-60950441 Msa1204980:CDS 30.0%
TATTACAGAATCTTTGTGGA+GGG + chr8_1:60950423-60950442 Msa1204980:CDS 30.0%
GTCAAGCAACTTTACAATAT+TGG - chr8_1:60950450-60950469 None:intergenic 30.0%
! ATGTCGCTTGTTAAGAAAAA+AGG - chr8_1:60950618-60950637 None:intergenic 30.0%
!! AATGAACTGTACATTTTGGT+TGG + chr8_1:60950836-60950855 Msa1204980:intron 30.0%
TGGTTTAGATCAATCATAAC+CGG - chr8_1:60951180-60951199 None:intergenic 30.0%
!! AAGTTGTTTTATAGTTGGCA+TGG - chr8_1:60951224-60951243 None:intergenic 30.0%
CAGTAAACATTTGAATGAAC+AGG - chr8_1:60951297-60951316 None:intergenic 30.0%
!!! TGTTCCAAACTCTAAAGTTT+TGG + chr8_1:60951315-60951334 Msa1204980:intron 30.0%
AATGTATGTATTGTCACTGT+TGG + chr8_1:60951458-60951477 Msa1204980:intron 30.0%
ATGTATGTATTGTCACTGTT+GGG + chr8_1:60951459-60951478 Msa1204980:intron 30.0%
TTTCAATAGCCACAAAAAAC+TGG - chr8_1:60951545-60951564 None:intergenic 30.0%
! AGTTATTTGAAACTTCTACC+AGG + chr8_1:60951571-60951590 Msa1204980:intron 30.0%
TGGTCAATCATTACATTATG+GGG - chr8_1:60951644-60951663 None:intergenic 30.0%
CATGGTCAATCATTACATTA+TGG - chr8_1:60951646-60951665 None:intergenic 30.0%
GTTTGAAGGTTAAGTTTATG+GGG + chr8_1:60951979-60951998 Msa1204980:intron 30.0%
TTTGAAGGTTAAGTTTATGG+GGG + chr8_1:60951980-60951999 Msa1204980:intron 30.0%
GTTATTATGTTACGTTAGTG+AGG - chr8_1:60952052-60952071 None:intergenic 30.0%
GCTATTATGTTATGTTAGTG+AGG - chr8_1:60952124-60952143 None:intergenic 30.0%
TGATGACAATCAACCTATTA+TGG - chr8_1:60952408-60952427 None:intergenic 30.0%
ATGATTACTCTCTAGATTTG+TGG + chr8_1:60952593-60952612 Msa1204980:CDS 30.0%
CTAAGGTTTAACTCAACAAA+TGG - chr8_1:60952709-60952728 None:intergenic 30.0%
TTATCGTGACCATAAAAGAA+CGG - chr8_1:60952843-60952862 None:intergenic 30.0%
!! TTCAGTACTACTTTTACTCT+TGG + chr8_1:60952958-60952977 Msa1204980:intron 30.0%
!!! ATGTATCTTGTTTTTCTGCT+GGG + chr8_1:60953047-60953066 Msa1204980:intron 30.0%
TAGAAGAAAAGTTGGAAACA+GGG - chr8_1:60953095-60953114 None:intergenic 30.0%
AGGATAAGTAGAAGAAAAGT+TGG - chr8_1:60953103-60953122 None:intergenic 30.0%
! AACTTTTCTTCTACTTATCC+TGG + chr8_1:60953102-60953121 Msa1204980:intron 30.0%
! ACTTTTCTTCTACTTATCCT+GGG + chr8_1:60953103-60953122 Msa1204980:intron 30.0%
!!! CTTAGTTTTAGAAGCAACTT+AGG + chr8_1:60953228-60953247 Msa1204980:intron 30.0%
! GTTCTGTGCTTTCATAATTT+TGG + chr8_1:60953401-60953420 Msa1204980:intron 30.0%
CCCAATATTGTATTTGTAAC+AGG + chr8_1:60953476-60953495 Msa1204980:intron 30.0%
GCCTGTTACAAATACAATAT+TGG - chr8_1:60953480-60953499 None:intergenic 30.0%
! ATTTGTGTTTGGTCTTCATT+TGG + chr8_1:60953751-60953770 Msa1204980:intron 30.0%
! TTTGTGTTTGGTCTTCATTT+GGG + chr8_1:60953752-60953771 Msa1204980:intron 30.0%
AAAGAGGAAAAATCCAAACA+AGG - chr8_1:60953842-60953861 None:intergenic 30.0%
GTGCAATGATCTAATAAACA+GGG - chr8_1:60953912-60953931 None:intergenic 30.0%
AGTGCAATGATCTAATAAAC+AGG - chr8_1:60953913-60953932 None:intergenic 30.0%
TTCTCGAAGTAATTGTAGTT+AGG + chr8_1:60953988-60954007 Msa1204980:intron 30.0%
!!! CCTTAAAGCATTTTGAAACA+CGG - chr8_1:60954052-60954071 None:intergenic 30.0%
CGTGTTTCAAAATGCTTTAA+GGG + chr8_1:60954050-60954069 Msa1204980:intron 30.0%
! TTTTTACTTCTAATAGTGGC+GGG - chr8_1:60954182-60954201 None:intergenic 30.0%
AAACACTTGTATGGTAAGAA+GGG - chr8_1:60954422-60954441 None:intergenic 30.0%
AATTGGATTGAAGTATGGAT+GGG - chr8_1:60954496-60954515 None:intergenic 30.0%
TAATTGGATTGAAGTATGGA+TGG - chr8_1:60954497-60954516 None:intergenic 30.0%
CTTCAATCCAATTAGAAATG+TGG + chr8_1:60954503-60954522 Msa1204980:CDS 30.0%
CTACTTTCCACATTTCTAAT+TGG - chr8_1:60954513-60954532 None:intergenic 30.0%
ATAACAAAATCGGAAACCAA+AGG - chr8_1:60954693-60954712 None:intergenic 30.0%
!!! GGTTTCCGATTTTGTTATTT+TGG + chr8_1:60954695-60954714 Msa1204980:three_prime_UTR 30.0%
!!! TTCCGATTTTGTTATTTTGG+TGG + chr8_1:60954698-60954717 Msa1204980:three_prime_UTR 30.0%
!!! GTTATTTTGGTGGAAATTTC+AGG + chr8_1:60954708-60954727 Msa1204980:three_prime_UTR 30.0%
CATAAATGGAAAATGGGTCA+AGG - chr8_1:60948187-60948206 None:intergenic 35.0%
! CTTGACCCATTTTCCATTTA+TGG + chr8_1:60948185-60948204 Msa1204980:exon 35.0%
TACGGCCATAAATGGAAAAT+GGG - chr8_1:60948193-60948212 None:intergenic 35.0%
TTACGGCCATAAATGGAAAA+TGG - chr8_1:60948194-60948213 None:intergenic 35.0%
TCGTAATCCCAATATTCCTT+AGG - chr8_1:60948510-60948529 None:intergenic 35.0%
TTATTATTACCCCCACTGAA+CGG - chr8_1:60948541-60948560 None:intergenic 35.0%
!! CTAGGGTATTGTTGTTGATT+TGG + chr8_1:60948631-60948650 Msa1204980:intron 35.0%
CAAACCTGTTAAGAAGAAGA+AGG + chr8_1:60948790-60948809 Msa1204980:CDS 35.0%
ATCACCTTCTTCTTCTTAAC+AGG - chr8_1:60948797-60948816 None:intergenic 35.0%
TATGATAACCCCTTTCACTA+GGG - chr8_1:60949026-60949045 None:intergenic 35.0%
TTATGATAACCCCTTTCACT+AGG - chr8_1:60949027-60949046 None:intergenic 35.0%
TCATGATGTTAGGAACGAAT+TGG - chr8_1:60949293-60949312 None:intergenic 35.0%
! TTTTAACCAGCCATCCATTA+CGG + chr8_1:60949329-60949348 Msa1204980:intron 35.0%
! TGTGTATAATCCGTAATGGA+TGG - chr8_1:60949342-60949361 None:intergenic 35.0%
! TTTTTGATGTCGTTCAATGG+TGG - chr8_1:60949543-60949562 None:intergenic 35.0%
AGAATCATAGAGAACAGAGA+AGG + chr8_1:60949638-60949657 Msa1204980:intron 35.0%
CATAATAATTGGGGAAAGAG+AGG + chr8_1:60949706-60949725 Msa1204980:intron 35.0%
TAAGGAACACAGATAGAGAA+TGG + chr8_1:60949731-60949750 Msa1204980:intron 35.0%
! GAAGGATAATTTGCCAAAAG+TGG + chr8_1:60949772-60949791 Msa1204980:intron 35.0%
!!! GATTTTACATCTGCCACTTT+TGG - chr8_1:60949788-60949807 None:intergenic 35.0%
!! AGCTCTTTTGAGTGTTATAC+TGG + chr8_1:60949822-60949841 Msa1204980:intron 35.0%
!! AGGTCTTTTGAGTGTTATAC+TGG + chr8_1:60949872-60949891 Msa1204980:intron 35.0%
TTATCATCAAGTTACCATGG+TGG - chr8_1:60949939-60949958 None:intergenic 35.0%
! AACAGTCTTATCCCATATGA+TGG - chr8_1:60949991-60950010 None:intergenic 35.0%
AGAATGAAGATGCATAAGCA+TGG - chr8_1:60950039-60950058 None:intergenic 35.0%
GAAAATAGAAAATGTCGTGC+TGG + chr8_1:60950100-60950119 Msa1204980:intron 35.0%
ATATCATAGTCTGACAGTGT+AGG - chr8_1:60950551-60950570 None:intergenic 35.0%
ACAAGCAATTTCAAGCGAAA+AGG - chr8_1:60950982-60951001 None:intergenic 35.0%
! ATGAAGTTTTCTGATCAGGA+TGG + chr8_1:60951009-60951028 Msa1204980:intron 35.0%
!! AGTTTCATTGACTTGTTGTC+TGG + chr8_1:60951135-60951154 Msa1204980:intron 35.0%
GAGTCATATACATAATGAGC+TGG - chr8_1:60951200-60951219 None:intergenic 35.0%
!! CTAGCCAAAACTTTAGAGTT+TGG - chr8_1:60951322-60951341 None:intergenic 35.0%
ATGCTAAGAATGAAACCTAC+AGG - chr8_1:60951408-60951427 None:intergenic 35.0%
TAGCCACAAAAAACTGGAAA+TGG - chr8_1:60951539-60951558 None:intergenic 35.0%
TAAGCTTCGCCTTATAGATT+GGG + chr8_1:60951673-60951692 Msa1204980:CDS 35.0%
GAAGGAATATAATGTTCGTG+TGG + chr8_1:60951721-60951740 Msa1204980:CDS 35.0%
CAACCTTTCTATCTGCAATT+AGG + chr8_1:60951908-60951927 Msa1204980:intron 35.0%
AAGCCTAATTGCAGATAGAA+AGG - chr8_1:60951914-60951933 None:intergenic 35.0%
TTTCTATCTGCAATTAGGCT+TGG + chr8_1:60951913-60951932 Msa1204980:intron 35.0%
! GGCTTGGTTATACATATACT+TGG + chr8_1:60951929-60951948 Msa1204980:intron 35.0%
TTGAAGGTTAAGTTTATGGG+GGG + chr8_1:60951981-60952000 Msa1204980:intron 35.0%
TGAAGTGATAAGGAAGTCAT+TGG + chr8_1:60952018-60952037 Msa1204980:intron 35.0%
! TGGGAAGATTTTTGTACAGA+GGG + chr8_1:60952261-60952280 Msa1204980:intron 35.0%
TCCAAAATCAATACTGTACG+TGG + chr8_1:60952308-60952327 Msa1204980:intron 35.0%
!!! ACCACGTACAGTATTGATTT+TGG - chr8_1:60952312-60952331 None:intergenic 35.0%
TGATGGCATAAGGATGTTTA+TGG - chr8_1:60952358-60952377 None:intergenic 35.0%
CATTGTAATCTGATGGCATA+AGG - chr8_1:60952368-60952387 None:intergenic 35.0%
GGAGACTTCAAATTTCACAT+TGG - chr8_1:60952775-60952794 None:intergenic 35.0%
ATATCTGTAACAACACACAC+AGG - chr8_1:60952809-60952828 None:intergenic 35.0%
! GTGTGTTGTTACAGATATTC+CGG + chr8_1:60952811-60952830 Msa1204980:intron 35.0%
TCACGATAACTATGATCAAC+TGG + chr8_1:60952854-60952873 Msa1204980:CDS 35.0%
ACATAATCAAGTTCCCAATG+TGG - chr8_1:60953009-60953028 None:intergenic 35.0%
!!! CATGTATCTTGTTTTTCTGC+TGG + chr8_1:60953046-60953065 Msa1204980:intron 35.0%
GTAGAAGAAAAGTTGGAAAC+AGG - chr8_1:60953096-60953115 None:intergenic 35.0%
TTCTTCATGCAATAGGTACT+TGG + chr8_1:60953299-60953318 Msa1204980:intron 35.0%
TCTTCATGCAATAGGTACTT+GGG + chr8_1:60953300-60953319 Msa1204980:intron 35.0%
! GAATAAGTATCGCATTGAGT+TGG + chr8_1:60953346-60953365 Msa1204980:CDS 35.0%
! CAATAAGTGCTGCAAAATGT+GGG - chr8_1:60953373-60953392 None:intergenic 35.0%
! CACATTTTGCAGCACTTATT+GGG + chr8_1:60953372-60953391 Msa1204980:CDS 35.0%
ACATTAATGAACCTTTGCCA+TGG - chr8_1:60953514-60953533 None:intergenic 35.0%
ACTATAATGCATACTACCTC+AGG - chr8_1:60953559-60953578 None:intergenic 35.0%
! AGTATTTTCATTGCTGCACT+TGG + chr8_1:60953723-60953742 Msa1204980:intron 35.0%
! GTATTTTCATTGCTGCACTT+GGG + chr8_1:60953724-60953743 Msa1204980:intron 35.0%
! TTGTGTTTGGTCTTCATTTG+GGG + chr8_1:60953753-60953772 Msa1204980:intron 35.0%
ATGTATCTGACCGAAATTGA+TGG + chr8_1:60953941-60953960 Msa1204980:intron 35.0%
AAGTAATTGTAGTTAGGACC+TGG + chr8_1:60953994-60954013 Msa1204980:intron 35.0%
AGTAATTGTAGTTAGGACCT+GGG + chr8_1:60953995-60954014 Msa1204980:intron 35.0%
CCGTGTTTCAAAATGCTTTA+AGG + chr8_1:60954049-60954068 Msa1204980:intron 35.0%
CATTGAATAACCGATGTATC+TGG + chr8_1:60954217-60954236 Msa1204980:intron 35.0%
CAAACACTTGTATGGTAAGA+AGG - chr8_1:60954423-60954442 None:intergenic 35.0%
CTTCTTACCATACAAGTGTT+TGG + chr8_1:60954421-60954440 Msa1204980:intron 35.0%
ATGAGTACCAAACACTTGTA+TGG - chr8_1:60954431-60954450 None:intergenic 35.0%
!! CTGATGCTTGTTGTGATATA+TGG + chr8_1:60954556-60954575 Msa1204980:three_prime_UTR 35.0%
! TTTATGGTGGAACTTGCATT+TGG + chr8_1:60954612-60954631 Msa1204980:three_prime_UTR 35.0%
! TTATGGTGGAACTTGCATTT+GGG + chr8_1:60954613-60954632 Msa1204980:three_prime_UTR 35.0%
TCGTTCGTCCTAAGGAATAT+TGG + chr8_1:60948499-60948518 Msa1204980:CDS 40.0%
CGTTCGTCCTAAGGAATATT+GGG + chr8_1:60948500-60948519 Msa1204980:CDS 40.0%
AAGATGATTATGAGGTGGTG+AGG + chr8_1:60948687-60948706 Msa1204980:CDS 40.0%
CTCATAAATGGATGTGCACA+AGG + chr8_1:60948977-60948996 Msa1204980:intron 40.0%
TCAGTTACATCCCTAGTGAA+AGG + chr8_1:60949013-60949032 Msa1204980:intron 40.0%
CAGTTACATCCCTAGTGAAA+GGG + chr8_1:60949014-60949033 Msa1204980:intron 40.0%
AGTTACATCCCTAGTGAAAG+GGG + chr8_1:60949015-60949034 Msa1204980:intron 40.0%
! TTTCATACATTGGGTGCTGT+TGG + chr8_1:60949091-60949110 Msa1204980:intron 40.0%
!! ATTCTCCTCGGTGCTAATTT+GGG + chr8_1:60949163-60949182 Msa1204980:intron 40.0%
!! TATAATCCGTAATGGATGGC+TGG - chr8_1:60949338-60949357 None:intergenic 40.0%
TTGAGAGAACCTAGAAGACT+AGG + chr8_1:60949567-60949586 Msa1204980:intron 40.0%
CATAGAGAACAGAGAAGGAA+AGG + chr8_1:60949643-60949662 Msa1204980:intron 40.0%
ATTGGGGAAAGAGAGGATTA+AGG + chr8_1:60949713-60949732 Msa1204980:intron 40.0%
AGCCCATTCAATTTCAGAGA+AGG + chr8_1:60949754-60949773 Msa1204980:intron 40.0%
ATGGGATAAGACTGTTAGTG+AGG + chr8_1:60949995-60950014 Msa1204980:intron 40.0%
! CACAGATTGAAGTGTTACAG+TGG - chr8_1:60950065-60950084 None:intergenic 40.0%
CACTGTAACACTTCAATCTG+TGG + chr8_1:60950063-60950082 Msa1204980:intron 40.0%
ATGTATGATACAGTGGCAGA+AGG + chr8_1:60950284-60950303 Msa1204980:intron 40.0%
TGTATGATACAGTGGCAGAA+GGG + chr8_1:60950285-60950304 Msa1204980:intron 40.0%
TCTTGAGCACAACAAGATCA+AGG - chr8_1:60950679-60950698 None:intergenic 40.0%
!!! TTGGTTGGTATTTTTGGACC+TGG + chr8_1:60950851-60950870 Msa1204980:intron 40.0%
!! ATTTTTGGACCTGGTATCTC+AGG + chr8_1:60950860-60950879 Msa1204980:intron 40.0%
GTTATAGAACTCTGCTGCAT+AGG + chr8_1:60950891-60950910 Msa1204980:intron 40.0%
CAAGACAATGTGATATGCCT+TGG - chr8_1:60950929-60950948 None:intergenic 40.0%
AAAACTGGAAATGGCAGGAT+TGG - chr8_1:60951530-60951549 None:intergenic 40.0%
CACAAAAAACTGGAAATGGC+AGG - chr8_1:60951535-60951554 None:intergenic 40.0%
!!! CTGCCATTTCCAGTTTTTTG+TGG + chr8_1:60951533-60951552 Msa1204980:intron 40.0%
TTGAAACTTCTACCAGGCAT+TGG + chr8_1:60951577-60951596 Msa1204980:intron 40.0%
AATGGCAATAATCCAATGCC+TGG - chr8_1:60951592-60951611 None:intergenic 40.0%
TTGGATTATTGCCATTCGCA+AGG + chr8_1:60951596-60951615 Msa1204980:CDS 40.0%
TGGATTATTGCCATTCGCAA+GGG + chr8_1:60951597-60951616 Msa1204980:CDS 40.0%
ATTCGCAAGGGATTATGCAT+CGG + chr8_1:60951609-60951628 Msa1204980:CDS 40.0%
GTAAGCTTCGCCTTATAGAT+TGG + chr8_1:60951672-60951691 Msa1204980:CDS 40.0%
AAGCTTCGCCTTATAGATTG+GGG + chr8_1:60951674-60951693 Msa1204980:CDS 40.0%
TTGCAGAGTTCTATCATCCT+GGG + chr8_1:60951699-60951718 Msa1204980:CDS 40.0%
CGAACATTATATTCCTTCCC+AGG - chr8_1:60951719-60951738 None:intergenic 40.0%
ATAATGTTCGTGTGGCTTCA+AGG + chr8_1:60951729-60951748 Msa1204980:CDS 40.0%
AGTTAGGACATTGGGTGATA+CGG + chr8_1:60951809-60951828 Msa1204980:intron 40.0%
TTTATGGGGGGAAGGATATA+AGG + chr8_1:60951993-60952012 Msa1204980:intron 40.0%
! CTGGGAAGATTTTTGTACAG+AGG + chr8_1:60952260-60952279 Msa1204980:intron 40.0%
! GGGAAGATTTTTGTACAGAG+GGG + chr8_1:60952262-60952281 Msa1204980:intron 40.0%
! GGAAGATTTTTGTACAGAGG+GGG + chr8_1:60952263-60952282 Msa1204980:intron 40.0%
TGGCATAAGGATGTTTATGG+AGG - chr8_1:60952355-60952374 None:intergenic 40.0%
GAAGATCAACAAGAAGCTCT+GGG - chr8_1:60952567-60952586 None:intergenic 40.0%
TGAAGATCAACAAGAAGCTC+TGG - chr8_1:60952568-60952587 None:intergenic 40.0%
TCTCTAGATTTGTGGAGTCT+TGG + chr8_1:60952601-60952620 Msa1204980:CDS 40.0%
AGTCTTGGTTGTATGTTTGC+CGG + chr8_1:60952616-60952635 Msa1204980:CDS 40.0%
!! AAATTTGCTGCTTACCATCC+CGG - chr8_1:60952638-60952657 None:intergenic 40.0%
TGCTGTAGTTGAGGATTCTA+AGG - chr8_1:60952726-60952745 None:intergenic 40.0%
GATATGTCATGCTGTAGTTG+AGG - chr8_1:60952735-60952754 None:intergenic 40.0%
GTTGTTACAGATATTCCGGA+AGG + chr8_1:60952815-60952834 Msa1204980:intron 40.0%
ACACACATAACCCAACAATC+TGG - chr8_1:60952927-60952946 None:intergenic 40.0%
ATTGTTGGGTTATGTGTGTG+TGG + chr8_1:60952928-60952947 Msa1204980:intron 40.0%
TTGTTGGGTTATGTGTGTGT+GGG + chr8_1:60952929-60952948 Msa1204980:intron 40.0%
AAAAGTTGGAAACAGGGCAA+AGG - chr8_1:60953089-60953108 None:intergenic 40.0%
! CCAATAAGTGCTGCAAAATG+TGG - chr8_1:60953374-60953393 None:intergenic 40.0%
! CCACATTTTGCAGCACTTAT+TGG + chr8_1:60953371-60953390 Msa1204980:CDS 40.0%
! ATTTTGCAGCACTTATTGGG+AGG + chr8_1:60953375-60953394 Msa1204980:CDS 40.0%
GTATTTGTAACAGGCATAGC+AGG + chr8_1:60953485-60953504 Msa1204980:intron 40.0%
TACGATACGATCACCAAGAA+CGG + chr8_1:60953661-60953680 Msa1204980:CDS 40.0%
AAAAGATTGGGCTGTTACCA+TGG - chr8_1:60953703-60953722 None:intergenic 40.0%
!! ACTTGGGCTTGATTTGTGTT+TGG + chr8_1:60953740-60953759 Msa1204980:intron 40.0%
! TCTGTTAATCCTGCCTTGTT+TGG + chr8_1:60953826-60953845 Msa1204980:intron 40.0%
AGGAAAAATCCAAACAAGGC+AGG - chr8_1:60953838-60953857 None:intergenic 40.0%
! TTGTATGGTAAGAAGGGCAT+TGG - chr8_1:60954416-60954435 None:intergenic 40.0%
ATCGGAAACCAAAGGCAATA+GGG - chr8_1:60954685-60954704 None:intergenic 40.0%
AATCGGAAACCAAAGGCAAT+AGG - chr8_1:60954686-60954705 None:intergenic 40.0%
! TATCGCGCGACAAGTTGAAT+TGG - chr8_1:60948230-60948249 None:intergenic 45.0%
ATCAGCATAAACCCTAGCCT+TGG - chr8_1:60948472-60948491 None:intergenic 45.0%
CAGGGAGCAAGATGATTATG+AGG + chr8_1:60948679-60948698 Msa1204980:intron 45.0%
GGAGCAAGATGATTATGAGG+TGG + chr8_1:60948682-60948701 Msa1204980:CDS 45.0%
TTATGAGGTGGTGAGGAAAG+TGG + chr8_1:60948694-60948713 Msa1204980:CDS 45.0%
TATGAGGTGGTGAGGAAAGT+GGG + chr8_1:60948695-60948714 Msa1204980:CDS 45.0%
! AACCGACACTTTTGTGTCAC+CGG + chr8_1:60948851-60948870 Msa1204980:intron 45.0%
GAATCAAACCTGAGACCTTG+AGG - chr8_1:60949147-60949166 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCCT+CGG + chr8_1:60949151-60949170 Msa1204980:intron 45.0%
!! GATTCTCCTCGGTGCTAATT+TGG + chr8_1:60949162-60949181 Msa1204980:intron 45.0%
! AGTACAGCTCCTAGTCTTCT+AGG - chr8_1:60949579-60949598 None:intergenic 45.0%
CATGGTGGCATGGTGAAATT+AGG - chr8_1:60949924-60949943 None:intergenic 45.0%
CTAATTTCACCATGCCACCA+TGG + chr8_1:60949922-60949941 Msa1204980:intron 45.0%
ATCAAGTTACCATGGTGGCA+TGG - chr8_1:60949934-60949953 None:intergenic 45.0%
TAACACTATGGCCCATTGCA+CGG - chr8_1:60950220-60950239 None:intergenic 45.0%
GATGCATAATCCCTTGCGAA+TGG - chr8_1:60951610-60951629 None:intergenic 45.0%
TTCGCAAGGGATTATGCATC+GGG + chr8_1:60951610-60951629 Msa1204980:CDS 45.0%
AGCTTCGCCTTATAGATTGG+GGG + chr8_1:60951675-60951694 Msa1204980:CDS 45.0%
CTTGCAGAGTTCTATCATCC+TGG + chr8_1:60951698-60951717 Msa1204980:CDS 45.0%
AGAGTTCTATCATCCTGGGA+AGG + chr8_1:60951703-60951722 Msa1204980:CDS 45.0%
TTTATAGGCGCTCACAATGC+AGG + chr8_1:60951782-60951801 Msa1204980:intron 45.0%
TCACAATGCAGGTAGGAGTT+AGG + chr8_1:60951793-60951812 Msa1204980:intron 45.0%
CAGGTAGGAGTTAGGACATT+GGG + chr8_1:60951801-60951820 Msa1204980:intron 45.0%
GTTAGGACATTGGGTGATAC+GGG + chr8_1:60951810-60951829 Msa1204980:intron 45.0%
AGGTTAAGTTTATGGGGGGA+AGG + chr8_1:60951985-60952004 Msa1204980:intron 45.0%
AGTGAGGGAGTTGAACATCT+TGG - chr8_1:60952108-60952127 None:intergenic 45.0%
GTCTTGGTTGTATGTTTGCC+GGG + chr8_1:60952617-60952636 Msa1204980:CDS 45.0%
CACACACAGGTAAGTGAAGT+AGG - chr8_1:60952796-60952815 None:intergenic 45.0%
CATAAAAGAACGGCTCCTTC+CGG - chr8_1:60952833-60952852 None:intergenic 45.0%
ATCAACTGGTCAAGATAGCC+AGG + chr8_1:60952868-60952887 Msa1204980:CDS 45.0%
TCAACTGGTCAAGATAGCCA+GGG + chr8_1:60952869-60952888 Msa1204980:CDS 45.0%
TTCACATGCTACACTTACCC+TGG - chr8_1:60952889-60952908 None:intergenic 45.0%
GGTAAGTGTAGCATGTGAAG+TGG + chr8_1:60952890-60952909 Msa1204980:intron 45.0%
!! GATTGCTGCTTTCACAGTCA+CGG - chr8_1:60953173-60953192 None:intergenic 45.0%
CATGCAATAGGTACTTGGGA+CGG + chr8_1:60953304-60953323 Msa1204980:intron 45.0%
TCAACACTTGACTGTTCCTG+AGG + chr8_1:60953540-60953559 Msa1204980:CDS 45.0%
! ACCATGGCTTCTTTTGCAGT+GGG - chr8_1:60953687-60953706 None:intergenic 45.0%
! TACCATGGCTTCTTTTGCAG+TGG - chr8_1:60953688-60953707 None:intergenic 45.0%
! TACTTCTAATAGTGGCGGGA+GGG - chr8_1:60954178-60954197 None:intergenic 45.0%
! TTACTTCTAATAGTGGCGGG+AGG - chr8_1:60954179-60954198 None:intergenic 45.0%
TTCTCTTGCCCTATTGCCTT+TGG + chr8_1:60954674-60954693 Msa1204980:three_prime_UTR 45.0%
!!! ATTTTTTTTTTAAAATCTAA+AGG - chr8_1:60954349-60954368 None:intergenic 5.0%
CAACTTGTCGCGCGATAGAT+TGG + chr8_1:60948233-60948252 Msa1204980:CDS 50.0%
AAATGGTTGTTCGGCGGTGA+CGG - chr8_1:60948363-60948382 None:intergenic 50.0%
AATTTCTGCGCCATGTCGAC+GGG - chr8_1:60948417-60948436 None:intergenic 50.0%
GAATTTCTGCGCCATGTCGA+CGG - chr8_1:60948418-60948437 None:intergenic 50.0%
GTCGACATGGCGCAGAAATT+CGG + chr8_1:60948417-60948436 Msa1204980:CDS 50.0%
TGTCAACGTCGTTCGTCCTA+AGG + chr8_1:60948491-60948510 Msa1204980:CDS 50.0%
!! TGAAGCATCGAAACAGACGC+CGG - chr8_1:60948873-60948892 None:intergenic 50.0%
!! GGTGCTGTTGGTGTTGACTT+GGG + chr8_1:60949103-60949122 Msa1204980:intron 50.0%
!! TTGGTGTTGACTTGGGACCT+TGG + chr8_1:60949110-60949129 Msa1204980:intron 50.0%
TTGAGGAGGATCACACTCCA+AGG - chr8_1:60949130-60949149 None:intergenic 50.0%
TTGGAGTGTGATCCTCCTCA+AGG + chr8_1:60949129-60949148 Msa1204980:intron 50.0%
TCAAACCTGAGACCTTGAGG+AGG - chr8_1:60949144-60949163 None:intergenic 50.0%
!! TCCTCGGTGCTAATTTGGGT+GGG + chr8_1:60949167-60949186 Msa1204980:intron 50.0%
! GGAAAGGTGCAAATAGCTGC+AGG + chr8_1:60949659-60949678 Msa1204980:intron 50.0%
TGGATGTCAACACCGTGCAA+TGG + chr8_1:60950205-60950224 Msa1204980:intron 50.0%
GGATGTCAACACCGTGCAAT+GGG + chr8_1:60950206-60950225 Msa1204980:intron 50.0%
TTGGACCTGGTATCTCAGGA+AGG + chr8_1:60950864-60950883 Msa1204980:intron 50.0%
TGGACCTGGTATCTCAGGAA+GGG + chr8_1:60950865-60950884 Msa1204980:intron 50.0%
ATAGGTGCTCTTGCGATCCA+AGG + chr8_1:60950909-60950928 Msa1204980:intron 50.0%
CTGCAAGCCCCCAATCTATA+AGG - chr8_1:60951685-60951704 None:intergenic 50.0%
GCAGGTAGGAGTTAGGACAT+TGG + chr8_1:60951800-60951819 Msa1204980:intron 50.0%
TGGTTGTATGTTTGCCGGGA+TGG + chr8_1:60952621-60952640 Msa1204980:CDS 50.0%
! CGGAAGGAGCCGTTCTTTTA+TGG + chr8_1:60952831-60952850 Msa1204980:CDS 50.0%
TTGCAACTGCGCCAGATTGT+TGG + chr8_1:60952913-60952932 Msa1204980:intron 50.0%
TGCAACTGCGCCAGATTGTT+GGG + chr8_1:60952914-60952933 Msa1204980:intron 50.0%
ATAGCAGGAAGCCATGGCAA+AGG + chr8_1:60953500-60953519 Msa1204980:CDS 50.0%
! TGGTCTTCATTTGGGGCCTT+CGG + chr8_1:60953760-60953779 Msa1204980:intron 50.0%
ATGCCAGATAAGAAGCCCGA+AGG - chr8_1:60953779-60953798 None:intergenic 50.0%
CGGGCTTCTTATCTGGCATT+TGG + chr8_1:60953780-60953799 Msa1204980:intron 50.0%
ACGGAGTTGTTGAGGAGGAG+CGG - chr8_1:60948344-60948363 None:intergenic 55.0%
GGACGGCGGAAATGGTTGTT+CGG - chr8_1:60948372-60948391 None:intergenic 55.0%
ACGAAACCCTCACCGTTCAG+TGG + chr8_1:60948526-60948545 Msa1204980:CDS 55.0%
CGAAACCCTCACCGTTCAGT+GGG + chr8_1:60948527-60948546 Msa1204980:CDS 55.0%
GAAACCCTCACCGTTCAGTG+GGG + chr8_1:60948528-60948547 Msa1204980:CDS 55.0%
AAACCCTCACCGTTCAGTGG+GGG + chr8_1:60948529-60948548 Msa1204980:CDS 55.0%
TTACCCCCACTGAACGGTGA+GGG - chr8_1:60948535-60948554 None:intergenic 55.0%
ATTACCCCCACTGAACGGTG+AGG - chr8_1:60948536-60948555 None:intergenic 55.0%
AGGTGGTGAGGAAAGTGGGA+AGG + chr8_1:60948699-60948718 Msa1204980:CDS 55.0%
GGTGGTGAGGAAAGTGGGAA+GGG + chr8_1:60948700-60948719 Msa1204980:CDS 55.0%
GTGGTGAGGAAAGTGGGAAG+GGG + chr8_1:60948701-60948720 Msa1204980:CDS 55.0%
TGGTGAGGAAAGTGGGAAGG+GGG + chr8_1:60948702-60948721 Msa1204980:CDS 55.0%
GGGAAGGGGGAAATACAGTG+AGG + chr8_1:60948715-60948734 Msa1204980:CDS 55.0%
! CGCCGGTGACACAAAAGTGT+CGG - chr8_1:60948856-60948875 None:intergenic 55.0%
!! GGGTGCTGTTGGTGTTGACT+TGG + chr8_1:60949102-60949121 Msa1204980:intron 55.0%
GTGATCCTCCTCAAGGTCTC+AGG + chr8_1:60949136-60949155 Msa1204980:intron 55.0%
!! CTCCTCGGTGCTAATTTGGG+TGG + chr8_1:60949166-60949185 Msa1204980:intron 55.0%
CAAGCCCTTCCTGAGATACC+AGG - chr8_1:60950872-60950891 None:intergenic 55.0%
CGTCTCTTCATGCGTCCTGT+AGG + chr8_1:60951390-60951409 Msa1204980:intron 55.0%
TAGGCGCTCACAATGCAGGT+AGG + chr8_1:60951786-60951805 Msa1204980:intron 55.0%
CATTGGGTGATACGGGTGCT+TGG + chr8_1:60951817-60951836 Msa1204980:intron 55.0%
AGTAAGCTGTGTGGTCTCCC+AGG - chr8_1:60953123-60953142 None:intergenic 55.0%
ACAGGCATAGCAGGAAGCCA+TGG + chr8_1:60953494-60953513 Msa1204980:intron 55.0%
! CTTTTGCAGTGGGCCGTTCT+TGG - chr8_1:60953677-60953696 None:intergenic 55.0%
GCCCACTGCAAAAGAAGCCA+TGG + chr8_1:60953683-60953702 Msa1204980:CDS 55.0%
! GGTCTTCATTTGGGGCCTTC+GGG + chr8_1:60953761-60953780 Msa1204980:intron 55.0%
GAGTTGTTGAGGAGGAGCGG+CGG - chr8_1:60948341-60948360 None:intergenic 60.0%
!! CGGTGACGGAGTTGTTGAGG+AGG - chr8_1:60948349-60948368 None:intergenic 60.0%
CGGCGGAAATGGTTGTTCGG+CGG - chr8_1:60948369-60948388 None:intergenic 60.0%
ACAACCATTTCCGCCGTCCG+CGG + chr8_1:60948373-60948392 Msa1204980:CDS 60.0%
GCCCACCCAAATTAGCACCG+AGG - chr8_1:60949171-60949190 None:intergenic 60.0%
GACTTGGGGTCTTCGACTGC+TGG - chr8_1:60950484-60950503 None:intergenic 60.0%
GGCGAAGCTTACGCTGCTCA+TGG - chr8_1:60951664-60951683 None:intergenic 60.0%
GGTGATACGGGTGCTTGGCA+AGG + chr8_1:60951822-60951841 Msa1204980:intron 60.0%
GATACGGGTGCTTGGCAAGG+TGG + chr8_1:60951825-60951844 Msa1204980:intron 60.0%
GGGCCTTCGGGCTTCTTATC+TGG + chr8_1:60953773-60953792 Msa1204980:intron 60.0%
TTGTTGAGGAGGAGCGGCGG+AGG - chr8_1:60948338-60948357 None:intergenic 65.0%
!! CGGCGGTGACGGAGTTGTTG+AGG - chr8_1:60948352-60948371 None:intergenic 65.0%
ATGTCGACGGGTGGACGAGG+AGG - chr8_1:60948405-60948424 None:intergenic 65.0%
TCCTCGTCCACCCGTCGACA+TGG + chr8_1:60948404-60948423 Msa1204980:CDS 65.0%
TTCTGCGCCATGTCGACGGG+TGG - chr8_1:60948414-60948433 None:intergenic 65.0%
GGAAAATCCACTCGCCGCCC+CGG + chr8_1:60948438-60948457 Msa1204980:CDS 65.0%
! TAGCCTTGGATGCAGCGCCG+GGG - chr8_1:60948458-60948477 None:intergenic 65.0%
!! CTAGCCTTGGATGCAGCGCC+GGG - chr8_1:60948459-60948478 None:intergenic 65.0%
!! CCTAGCCTTGGATGCAGCGC+CGG - chr8_1:60948460-60948479 None:intergenic 65.0%
CGGCGCTGCATCCAAGGCTA+GGG + chr8_1:60948458-60948477 Msa1204980:CDS 65.0%
ACGGGTGGACGAGGAGGAGG+AGG - chr8_1:60948399-60948418 None:intergenic 70.0%
TCGACGGGTGGACGAGGAGG+AGG - chr8_1:60948402-60948421 None:intergenic 70.0%
GCCATGTCGACGGGTGGACG+AGG - chr8_1:60948408-60948427 None:intergenic 70.0%
CCGGCGCTGCATCCAAGGCT+AGG + chr8_1:60948457-60948476 Msa1204980:CDS 70.0%
GAGGCCGCGGACGGCGGAAA+TGG - chr8_1:60948380-60948399 None:intergenic 75.0%
GAGGAGGAGGAGGCCGCGGA+CGG - chr8_1:60948389-60948408 None:intergenic 75.0%
GGACGAGGAGGAGGAGGCCG+CGG - chr8_1:60948393-60948412 None:intergenic 75.0%
! CCTTGGATGCAGCGCCGGGG+CGG - chr8_1:60948455-60948474 None:intergenic 75.0%
! GAGGAGGAGGCCGCGGACGG+CGG - chr8_1:60948386-60948405 None:intergenic 80.0%
! CCGCCCCGGCGCTGCATCCA+AGG + chr8_1:60948452-60948471 Msa1204980:CDS 80.0%
!! TGCAGCGCCGGGGCGGCGAG+TGG - chr8_1:60948448-60948467 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 60948072 60954906 60948072 ID=Msa1204980;Name=Msa1204980
chr8_1 mRNA 60948072 60954906 60948072 ID=Msa1204980-mRNA-1;Parent=Msa1204980;Name=Msa1204980-mRNA-1;_AED=0.15;_eAED=0.15;_QI=132|0.88|0.9|1|0.88|0.8|10|355|400
chr8_1 exon 60948072 60948550 60948072 ID=Msa1204980-mRNA-1:exon:19784;Parent=Msa1204980-mRNA-1
chr8_1 exon 60948682 60948811 60948682 ID=Msa1204980-mRNA-1:exon:19785;Parent=Msa1204980-mRNA-1
chr8_1 exon 60950404 60950538 60950404 ID=Msa1204980-mRNA-1:exon:19786;Parent=Msa1204980-mRNA-1
chr8_1 exon 60951593 60951750 60951593 ID=Msa1204980-mRNA-1:exon:19787;Parent=Msa1204980-mRNA-1
chr8_1 exon 60952552 60952642 60952552 ID=Msa1204980-mRNA-1:exon:19788;Parent=Msa1204980-mRNA-1
chr8_1 exon 60952825 60952890 60952825 ID=Msa1204980-mRNA-1:exon:19789;Parent=Msa1204980-mRNA-1
chr8_1 exon 60953314 60953396 60953314 ID=Msa1204980-mRNA-1:exon:19790;Parent=Msa1204980-mRNA-1
chr8_1 exon 60953498 60953561 60953498 ID=Msa1204980-mRNA-1:exon:19791;Parent=Msa1204980-mRNA-1
chr8_1 exon 60953636 60953704 60953636 ID=Msa1204980-mRNA-1:exon:19792;Parent=Msa1204980-mRNA-1
chr8_1 exon 60954492 60954906 60954492 ID=Msa1204980-mRNA-1:exon:19793;Parent=Msa1204980-mRNA-1
chr8_1 five_prime_UTR 60948072 60948203 60948072 ID=Msa1204980-mRNA-1:five_prime_utr;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60948204 60948550 60948204 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60948682 60948811 60948682 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60950404 60950538 60950404 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60951593 60951750 60951593 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60952552 60952642 60952552 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60952825 60952890 60952825 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60953314 60953396 60953314 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60953498 60953561 60953498 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60953636 60953704 60953636 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 CDS 60954492 60954551 60954492 ID=Msa1204980-mRNA-1:cds;Parent=Msa1204980-mRNA-1
chr8_1 three_prime_UTR 60954552 60954906 60954552 ID=Msa1204980-mRNA-1:three_prime_utr;Parent=Msa1204980-mRNA-1
Gene Sequence

>Msa1204980

ATGGCCGTAAAACATTTGCAATTCCAATTCAACTTGTCGCGCGATAGATTGGTCTTTCTCTTTCGAACATCTCAATCTCATTCTTTATTTCCTTATAATAATAAATTCCCCAAATCTTTTCTCTCTTTCTTCCTCCGCCGCTCCTCCTCAACAACTCCGTCACCGCCGAACAACCATTTCCGCCGTCCGCGGCCTCCTCCTCCTCGTCCACCCGTCGACATGGCGCAGAAATTCGGAAAATCCACTCGCCGCCCCGGCGCTGCATCCAAGGCTAGGGTTTATGCTGATGTCAACGTCGTTCGTCCTAAGGAATATTGGGATTACGAAACCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAAGTGGGAAGGGGGAAATACAGTGAGGTTTTTGAAGGTGTTCATTGTACTGATAATGAAAAATGTGTTATCAAGATTCTCAAACCTGTTAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCAAGTCTCATATTTGAATATGTCAACAACACTGATTTTAAAGCATTGGATTATTGCCATTCGCAAGGGATTATGCATCGGGATGTGAAGCCCCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAGGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGAGTCTTGGTTGTATGTTTGCCGGGATGATATTCCGGAAGGAGCCGTTCTTTTATGGTCACGATAACTATGATCAACTGGTCAAGATAGCCAGGGTACTTGGGACGGATGAATTAAATACATATTTGAATAAGTATCGCATTGAGTTGGACCCACATTTTGCAGCACTTATTGGGAGGCATAGCAGGAAGCCATGGCAAAGGTTCATTAATGTTGAAAATCAACACTTGACTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTACGATACGATCACCAAGAACGGCCCACTGCAAAAGAAGCCATGGCCCATCCATACTTCAATCCAATTAGAAATGTGGAAAGTAGCAGAGCTCGTGCACATTGA
Protein sequence

>Msa1204980

MAVKHLQFQFNLSRDRLVFLFRTSQSHSLFPYNNKFPKSFLSFFLRRSSSTTPSPPNNHFRRPRPPPPRPPVDMAQKFGKSTRRPGAASKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARVLGTDELNTYLNKYRIELDPHFAALIGRHSRKPWQRFINVENQHLTVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNVESSRARAH*